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> Main
CHEBI:131828 - 8,5'-cyclo-2'-deoxyguanosine
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ChEBI Ontology
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ChEBI Name
8,5'-cyclo-2'-deoxyguanosine
ChEBI ID
CHEBI:131828
Definition
An organic heterotetracyclic compound obtained by intramolecular formation of a C-C bond between positions 8 and 5' of 2'-deoxyguanosine.
Stars
This entity has been manually annotated by the ChEBI Team.
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Formula
C10H11N5O4
Net Charge
0
Average Mass
265.226
Monoisotopic Mass
265.08110
InChI
InChI=1S/C10H11N5O4/c11-
10-
13-
7-
4(9(18)
14-
10)
12-
8-
5(17)
6-
2(16)
1-
3(19-
6)
15(7)
8/h2-
3,5-
6,16-
17H,1H2,(H3,11,13,14,18)
/t2-
,3+,5-
,6-
/m0/s1
InChIKey
JYCOZDWXEDYCIX-VPXOEYFHSA-N
SMILES
[C@H]12N3C=4N=C(NC(C4N=C3[C@H]([C@]([C@H](C1)O)(O2)[H])O)=O)N
Metabolite of Species
Details
Mycoplasma genitalium
(NCBI:txid2097)
See:
PubMed
Roles Classification
Chemical Role
(s):
Bronsted base
A molecular entity capable of accepting a hydron from a donor (Br
o
nsted acid).
(via
organic amino compound
)
Biological Role
(s):
Mycoplasma genitalium metabolite
Any bacterial metabolite produced during a metabolic reaction in
Mycoplasma genitalium
.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
has functional parent
2'-deoxyguanosine (
CHEBI:17172
)
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
has role
Mycoplasma genitalium
metabolite (
CHEBI:131604
)
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
is a
N
-glycosyl compound (
CHEBI:21731
)
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
is a
aromatic amine (
CHEBI:33860
)
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
is a
bridged compound (
CHEBI:35990
)
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
is a
diol (
CHEBI:23824
)
8,5'-cyclo-2'-deoxyguanosine (
CHEBI:131828
)
is a
organic heterotetracyclic compound (
CHEBI:38163
)
IUPAC Name
(6
R
,7
S
,8
S
,10
R
)-
2-
amino-
6,8-
dihydroxy-
1,6,7,8,9,10-
hexahydro-
4
H
-
7,10-
epoxyazepino[1,2-
e
]purin-
4-
one
Synonyms
Sources
2'-Deoxy-8,5'-cycloguanosine
ChemIDplus
8,5'-cyclo-dG
ChEBI
cyclo-dG
ChEBI
cyclodG
ChEBI
Registry Numbers
Types
Sources
104504-22-5
CAS Registry Number
ChemIDplus
8160159
Reaxys Registry Number
Reaxys
Citations
Types
Sources
22817898
PubMed citation
Europe PMC
23961697
PubMed citation
Europe PMC
23965998
PubMed citation
Europe PMC
24392701
PubMed citation
Europe PMC
26123757
PubMed citation
Europe PMC
Last Modified
21 April 2016