CHEBI:28185 - kanamycin C

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name kanamycin C
ChEBI ID CHEBI:28185
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:6108, CHEBI:24950
Supplier Information
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Formula C18H36N4O11
Net Charge 0
Average Mass 484.49880
Monoisotopic Mass 484.23806
InChI InChI=1S/C18H36N4O11/c19-4-1-5(20)16(33-18-13(28)8(21)10(25)6(2-23)31-18)14(29)15(4)32-17-9(22)12(27)11(26)7(3-24)30-17/h4-18,23-29H,1-3,19-22H2/t4-,5+,6+,7+,8-,9+,10+,11+,12+,13+,14-,15+,16-,17+,18+/m0/s1
InChIKey WZDRWYJKESFZMB-FQSMHNGLSA-N
SMILES N[C@H]1C[C@@H](N)[C@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](N)[C@H]2O)[C@@H](O)[C@@H]1O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1N
Roles Classification
Biological Role(s): antimicrobial agent
A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
(via carbohydrate-containing antibiotic )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing kanamycin C (CHEBI:28185) is a kanamycins (CHEBI:24951)
kanamycin C (CHEBI:28185) is conjugate base of kanamycin C(4+) (CHEBI:72755)
Incoming 3''-deamino-3''-hydroxykanamycin C (CHEBI:73078) has functional parent kanamycin C (CHEBI:28185)
kanamycin (CHEBI:6104) has part kanamycin C (CHEBI:28185)
kanamycin C(4+) (CHEBI:72755) is conjugate acid of kanamycin C (CHEBI:28185)
IUPAC Name
(1R,2S,3S,4R,6S)-4,6-diamino-3-(3-amino-3-deoxy-α-D-glucopyranosyloxy)-2-hydroxycyclohexyl 2-amino-2-deoxy-α-D-glucopyranoside
Synonym Source
Kanamycin C KEGG COMPOUND
Manual Xrefs Databases
C00018690 KNApSAcK
C01823 KEGG COMPOUND
CPD-4823 MetaCyc
KNC PDBeChem
View more database links
Registry Numbers Types Sources
2280-32-2 CAS Registry Number ChemIDplus
61645 Beilstein Registry Number Beilstein
Last Modified
28 July 2014
General Comment
2004-07-06 Kanamycin C is a minor component of the naturally occurring antibiotic complex known as kanamycin.