CHEBI:51892 - BODIPY TR-X

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ChEBI Name BODIPY TR-X
ChEBI ID CHEBI:51892
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C31H29BF2N4O6S
Net Charge 0
Average Mass 634.45913
Monoisotopic Mass 634.18689
InChI InChI=1S/C31H29BF2N4O6S/c33-32(34)36-22(19-23-10-14-26(37(23)32)27-5-4-18-45-27)9-13-25(36)21-7-11-24(12-8-21)43-20-28(39)35-17-3-1-2-6-31(42)44-38-29(40)15-16-30(38)41/h4-5,7-14,18-19H,1-3,6,15-17,20H2,(H,35,39)
InChIKey NCYPKNAEMUYMBG-UHFFFAOYSA-N
SMILES F[B-]1(F)n2c(ccc2-c2cccs2)C=C2C=CC(c3ccc(OCC(=O)NCCCCCC(=O)ON4C(=O)CCC4=O)cc3)=[N+]12
Roles Classification
Application(s): fluorochrome
A fluorescent dye used to stain biological specimens.
dye

(via BODIPY dye )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing BODIPY TR-X (CHEBI:51892) has role fluorochrome (CHEBI:51217)
BODIPY TR-X (CHEBI:51892) is a BODIPY dye (CHEBI:51123)
BODIPY TR-X (CHEBI:51892) is a pyrrolidinone (CHEBI:38275)
IUPAC Name
(N-{6-[(2,5-dioxopyrrolidin-1-yl)oxy]-6-oxohexyl}-2-[4-(2-{[5-(thiophen-2-yl)-1H-pyrrol-2-yl-κN]methylene}-2H-pyrrol-5-yl-κN)phenoxy]acetamidato)(difluoro)boron
Synonym Source
6-(((4-(4,4-difluoro-5-(2-thienyl)-4-bora-3a,4a-diaza-s-indacene-3-yl)phenoxy)acetyl)amino)hexanoic acid, succinimidyl ester ChEBI
Last Modified
12 March 2009