CHEBI:52027 - dilC18(5) dye

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ChEBI Name dilC18(5) dye ChEBI ID CHEBI:52027 Stars This entity has been manually annotated by the ChEBI Team. Supplier Information Download Molfile XML SDF Find compounds which contain this structure Find compounds which resemble this structure Take structure to the Advanced Search Formula C61H99ClN2O4 Net Charge 0 Average Mass 959.90300 Monoisotopic Mass 958.72934 InChI InChI=1S/C61H99N2.ClHO4/c1-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-44-52-62-56-48-42-40-46-54(56)60(3,4)58(62)50-38-37-39-51-59-61(5,6)55-47-41-43-49-57(55)63(59)53-45-36-34-32-30-28-26-24-22-20-18-16-14-12-10-8-2;2-1(3,4)5/h37-43,46-51H,7-36,44-45,52-53H2,1-6H3;(H,2,3,4,5)/q+1;/p-1 InChIKey ZQSBJPAQPRVNHU-UHFFFAOYSA-M SMILES [O-]Cl(=O)(=O)=O.[H]C(=C([H])C([H])=C1N(CCCCCCCCCCCCCCCCCC)c2ccccc2C1(C)C)C([H])=C([H])C1=[N+](CCCCCCCCCCCCCCCCCC)c2ccccc2C1(C)C Roles Classification Application(s): fluorochrome A fluorescent dye used to stain biological specimens. dye (via cyanine dye ) View more via ChEBI Ontology ChEBI Ontology Outgoing dilC18(5) dye (CHEBI:52027) has part dilC18(5)(1+) (CHEBI:52817) dilC18(5) dye (CHEBI:52027) has role fluorochrome (CHEBI:51217) dilC18(5) dye (CHEBI:52027) is a Cy5 dye (CHEBI:37989) dilC18(5) dye (CHEBI:52027) is a organic perchlorate salt (CHEBI:52165) IUPAC Name 2-[5-(3,3-dimethyl-1-octadecyl-1,3-dihydro-2H-indol-2-ylidene)penta-1,3-dien-1-yl]-3,3-dimethyl-1-octadecyl-3H-indolium perchlorate Synonyms Sources 3H-Indolium, 2-(5-(1,3-dihydro-3,3-dimethyl-1-octadecyl-2H-indol-2-ylidene)-1,3-pentadienyl)-3,3-dimethyl-1-octadecyl-, perchlorate ChEBI DiD ChEBI DilC18(5) ChEBI Last Modified 24 July 2009