CHEBI:70841 - β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc
ChEBI ID CHEBI:70841
ChEBI ASCII Name beta-D-Galp-(1->4)-alpha-D-GalpNAc-(1->3)-[alpha-L-Fucp-(1->2)]-beta-D-Galp-(1->4)-beta-D-GlcpNAc
Definition A branched amino pentasaccharide comprised of a linear chain of β-D-galactose, N-acetyl-α-D-galactosamine, β-D-galactose and N-acetyl-β-D-glucosamine residues linked sequentially (1→4), (1→3) and (1→4), with an α-L-fucosyl residue linked (1→2) to the galactose residue proximal to the reducing-end N-acetylglucosamine residue.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
Download Molfile XML SDF
Formula C34H58N2O25
Net Charge 0
Average Mass 894.82270
Monoisotopic Mass 894.33287
InChI InChI=1S/C34H58N2O25/c1-8-17(43)22(48)24(50)32(53-8)61-29-28(19(45)12(5-38)56-34(29)59-26-13(6-39)54-30(52)15(20(26)46)35-9(2)41)60-31-16(36-10(3)42)21(47)27(14(7-40)57-31)58-33-25(51)23(49)18(44)11(4-37)55-33/h8,11-34,37-40,43-52H,4-7H2,1-3H3,(H,35,41)(H,36,42)/t8-,11+,12+,13+,14+,15+,16+,17+,18-,19-,20+,21+,22+,23-,24-,25+,26+,27-,28-,29+,30+,31+,32-,33-,34-/m0/s1
InChIKey GABPUYHGBUJHRN-JXQLCXQFSA-N
SMILES C[C@@H]1O[C@@H](O[C@H]2[C@@H](O[C@H](CO)[C@H](O)[C@@H]2O[C@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)[C@H](O)[C@H]2NC(C)=O)O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](O)O[C@@H]2CO)[C@@H](O)[C@H](O)[C@@H]1O
Roles Classification
Biological Role(s): epitope
The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc (CHEBI:70841) has role epitope (CHEBI:53000)
β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc (CHEBI:70841) is a amino pentasaccharide (CHEBI:59268)
β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)-[α-L-Fucp-(1→2)]-β-D-Galp-(1→4)-β-D-GlcpNAc (CHEBI:70841) is a glucosamine oligosaccharide (CHEBI:22485)
IUPAC Name
α-L-fucopyranosyl-(1→2)-[β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-α-D-galactopyranosyl-(1→3)]-β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-β-D-glucopyranose
Synonyms Sources
6-deoxy-α-L-galactopyranosyl-(1→2)-[β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-α-D-galactopyranosyl-(1→3)]-β-D-galactopyranosyl-(1→4)-2-acetamido-2-deoxy-β-D-glucopyranose IUPAC
α-L-Fuc-(1→2)-[β-D-Gal-(1→4)-α-D-GalNAc-(1→3)]-β-D-Gal-(1→4)-β-D-GlcNAc ChEBI
α-L-fucosyl-(1→2)-[β-D-galactosyl-(1→4)-N-acetyl-α-D-galactosaminyl-(1→3)]-β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosamine ChEBI
α-L-Fucp-(1→2)-[β-D-Galp-(1→4)-α-D-GalpNAc-(1→3)]-β-D-Galp-(1→4)-β-D-GlcpNAc JCBN
β-D-Gal-(1→4)-α-D-GalNAc-(1→3)-[α-L-Fuc-(1→2)]-β-D-Gal-(1→4)-β-D-GlcNAc ChEBI
β-D-glucopyranose, O-6-deoxy-α-L-galactopyranosyl-(1→2)-O-[O-β-D-galactopyranosyl-(1→4)-2-(acetylamino)-2-deoxy-α-D-galactopyranosyl-(1→3)]-O-β-D-galactopyranosyl-(1→4)-2-(acetylamino)-2-deoxy- ChEBI
Galb1-4GalNAca1-3(Fuca1-2)Galb1-4GlcNAcb ChEBI
Galβ1-4GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβ ChEBI
WURCS=2.0/4,5,4/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5][a2112h-1a_1-5_2*NCC/3=O]/1-2-3-4-2/a4-b1_b2-c1_b3-d1_d4-e1 GlyTouCan
Manual Xrefs Databases
G44738JR GlyTouCan
G44738JR GlyGen
View more database links
Citations Waiting for Citations Types Sources
19443021 PubMed citation Europe PMC
25568069 PubMed citation Europe PMC
31537530 PubMed citation Europe PMC
Last Modified
21 June 2024