CHEBI:835 - 2'-deoxy-5-hydroxymethyl-CDP

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ChEBI Name 2'-deoxy-5-hydroxymethyl-CDP
ChEBI ID CHEBI:835
Definition A pyrimidine 2'-deoxyribonucleoside 5'-diphosphate that is 2'-deoxycytidine 5'-diphosphate (CDP) substituted by a hydroxymethyl group at position 5.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C10H17N3O11P2
Net Charge 0
Average Mass 417.20312
Monoisotopic Mass 417.03383
InChI InChI=1S/C10H17N3O11P2/c11-9-5(3-14)2-13(10(16)12-9)8-1-6(15)7(23-8)4-22-26(20,21)24-25(17,18)19/h2,6-8,14-15H,1,3-4H2,(H,20,21)(H2,11,12,16)(H2,17,18,19)/t6-,7+,8+/m0/s1
InChIKey RQKDPSTWKKMBPM-XLPZGREQSA-N
SMILES Nc1nc(=O)n(cc1CO)[C@H]1C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O1
Roles Classification
Biological Role(s): mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
(via nucleoside 5'-diphosphate )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing 2'-deoxy-5-hydroxymethyl-CDP (CHEBI:835) has functional parent CDP (CHEBI:17239)
2'-deoxy-5-hydroxymethyl-CDP (CHEBI:835) is a pyrimidine 2'-deoxyribonucleoside 5'-diphosphate (CHEBI:37037)
IUPAC Name
2'-deoxy-5-(hydroxymethyl)cytidine 5'-(trihydrogen diphosphate)
Synonyms Sources
2'-deoxy-5-hydroxymethylcytidine 5'-diphosphate ChEBI
2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate KEGG COMPOUND
diphosphoric acid mono-(5-hydroxymethyl-2'-deoxy-cytidin-5'-yl ester) ChEBI
Manual Xref Database
C11038 KEGG COMPOUND
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Registry Numbers Types Sources
64127 Reaxys Registry Number Reaxys
64127 Beilstein Registry Number Beilstein
Last Modified
30 January 2015