CHEBI:84593 - 5'-GAUAUACACGCAUAUCAGCGUUCGCGU-3' RNA fragment

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ChEBI Name 5'-GAUAUACACGCAUAUCAGCGUUCGCGU-3' RNA fragment ChEBI ID CHEBI:84593 Definition An RNA fragment comprised of six guanosine, seven adenosine, seven uridine and seven cytidine residues connected by 3'→5' phosphodiester linkages in the sequence G-A-U-A-U-A-C-A-C-G-C-A-U-A-U-C-A-G-C-G-U-U-C-G-C-G-U. Stars This entity has been manually annotated by the ChEBI Team. Supplier Information ZINC000230540928 Download Molfile XML SDF Find compounds which contain this structure Find compounds which resemble this structure Take structure to the Advanced Search Formula C258H319N105O185P26 Net Charge 0 Average Mass 8656.20380 Monoisotopic Mass 8652.19597 InChI InChI=1S/C258H319N105O185P26/c259-102-1-13-337(247(406)311-102)214-132(374)158(524-554(428,429)485-41-93-175(149(391)231(514-93)355-66-302-120-189(271)286-58-294-197(120)355)543-572(464,465)493-49-99-181(155(397)238(520-99)362-73-309-127-204(362)328-245(278)335-211(127)404)547-574(468,469)495-51-101-182(156(398)239(522-101)363-74-310-128-205(363)329-246(279)336-212(128)405)548-573(466,467)494-50-100-180(154(396)237(521-100)361-72-308-126-203(361)327-244(277)334-210(126)403)546-569(458,459)482-37-87-166(140(382)222(508-87)346-22-10-111(368)320-256(346)415)532-553(426,427)474-33-83-164(138(380)220(504-83)344-20-8-109(366)318-254(344)413)530-551(422,423)473-28-78-159(133(375)215(499-78)338-14-2-103(260)312-248(338)407)527-560(440,441)491-47-97-178(152(394)235(518-97)359-70-306-124-201(359)325-242(275)332-208(124)401)545-568(456,457)478-32-82-163(137(379)219(503-82)342-18-6-107(264)316-252(342)411)528-559(438,439)490-46-96-177(151(393)234(517-96)358-69-305-123-200(358)324-241(274)331-207(123)400)535-549(418,419)470-26-76-129(371)130(372)213(497-76)343-19-7-108(365)317-253(343)412)77(498-214)27-472-552(424,425)531-165-84(505-221(139(165)381)345-21-9-110(367)319-255(345)414)34-480-566(452,453)540-173-94(515-229(147(173)389)353-64-300-118-187(269)284-56-292-195(118)353)44-488-571(462,463)542-176-95(516-232(150(176)392)356-67-303-121-190(272)287-59-295-198(121)356)45-489-570(460,461)541-174-92(513-230(148(174)390)354-65-301-119-188(270)285-57-293-196(119)354)40-484-556(432,433)526-161-81(502-217(135(161)377)340-16-4-105(262)314-250(340)409)31-477-567(454,455)544-179-98(519-236(153(179)395)360-71-307-125-202(360)326-243(276)333-209(125)402)48-492-561(442,443)529-162-80(501-218(136(162)378)341-17-5-106(263)315-251(341)410)30-476-563(446,447)537-170-89(510-226(144(170)386)350-61-297-115-184(266)281-53-289-192(115)350)39-483-555(430,431)525-160-79(500-216(134(160)376)339-15-3-104(261)313-249(339)408)29-475-562(444,445)538-171-90(511-227(145(171)387)351-62-298-116-185(267)282-54-290-193(116)351)42-486-557(434,435)534-168-86(507-224(142(168)384)348-24-12-113(370)322-258(348)417)36-481-565(450,451)539-172-91(512-228(146(172)388)352-63-299-117-186(268)283-55-291-194(117)352)43-487-558(436,437)533-167-85(506-223(141(167)383)347-23-11-112(369)321-257(347)416)35-479-564(448,449)536-169-88(509-225(143(169)385)349-60-296-114-183(265)280-52-288-191(114)349)38-471-550(420,421)523-157-75(25-364)496-233(131(157)373)357-68-304-122-199(357)323-240(273)330-206(122)399/h1-24,52-101,129-182,213-239,364,371-398H,25-51H2,(H,418,419)(H,420,421)(H,422,423)(H,424,425)(H,426,427)(H,428,429)(H,430,431)(H,432,433)(H,434,435)(H,436,437)(H,438,439)(H,440,441)(H,442,443)(H,444,445)(H,446,447)(H,448,449)(H,450,451)(H,452,453)(H,454,455)(H,456,457)(H,458,459)(H,460,461)(H,462,463)(H,464,465)(H,466,467)(H,468,469)(H2,259,311,406)(H2,260,312,407)(H2,261,313,408)(H2,262,314,409)(H2,263,315,410)(H2,264,316,411)(H2,265,280,288)(H2,266,281,289)(H2,267,282,290)(H2,268,283,291)(H2,269,284,292)(H2,270,285,293)(H2,271,286,294)(H2,272,287,295)(H,317,365,412)(H,318,366,413)(H,319,367,414)(H,320,368,415)(H,321,369,416)(H,322,370,417)(H3,273,323,330,399)(H3,274,324,331,400)(H3,275,325,332,401)(H3,276,326,333,402)(H3,277,327,334,403)(H3,278,328,335,404)(H3,279,329,336,405)/t75-,76-,77-,78-,79-,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91-,92-,93-,94-,95-,96-,97-,98-,99-,100-,101-,129-,130-,131-,132-,133-,134-,135-,136-,137-,138-,139-,140-,141-,142-,143-,144-,145-,146-,147-,148-,149-,150-,151-,152-,153-,154-,155-,156-,157-,158-,159-,160-,161-,162-,163-,164-,165-,166-,167-,168-,169-,170-,171-,172-,173-,174-,175-,176-,177-,178-,179-,180-,181-,182-,213-,214-,215-,216-,217-,218-,219-,220-,221-,222-,223-,224-,225-,226-,227-,228-,229-,230-,231-,232-,233-,234-,235-,236-,237-,238-,239-/m1/s1 InChIKey FWTAYYKKXZDWAO-ZIMQWMKMSA-N SMILES Nc1ccn([C@@H]2O[C@H](COP(O)(=O)O[C@@H]3[C@@H](COP(O)(=O)O[C@@H]4[C@@H](COP(O)(=O)O[C@@H]5[C@@H](COP(O)(=O)O[C@@H]6[C@@H](COP(O)(=O)O[C@@H]7[C@@H](COP(O)(=O)O[C@@H]8[C@@H](CO)O[C@H]([C@@H]8O)n8cnc9c8nc(N)[nH]c9=O)O[C@H]([C@@H]7O)n7cnc8c(N)ncnc78)O[C@H]([C@@H]6O)n6ccc(=O)[nH]c6=O)O[C@H]([C@@H]5O)n5cnc6c(N)ncnc56)O[C@H]([C@@H]4O)n4ccc(=O)[nH]c4=O)O[C@H]([C@@H]3O)n3cnc4c(N)ncnc34)[C@@H](OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3OP(O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n3ccc(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3ccc(N)nc3=O)n3cnc4c3nc(N)[nH]c4=O)n3ccc(N)nc3=O)n3ccc(=O)[nH]c3=O)n3ccc(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(=O)[nH]c3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c3nc(N)[nH]c4=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)[C@H]2O)c(=O)n1 ChEBI Ontology Outgoing 5'-GAUAUACACGCAUAUCAGCGUUCGCGU-3' RNA fragment (CHEBI:84593) is a RNA fragment (CHEBI:82726) IUPAC Name G-A-U-A-U-A-C-A-C-G-C-A-U-A-U-C-A-G-C-G-U-U-C-G-C-G-U Synonym Source GpApUpApUpApCpApCpGpCpApUpApUpCpApGpCpGpUpUpCpGpCpGpU ChEBI Citation Type Source 7678618 PubMed citation Europe PMC Last Modified 07 April 2015