CHEBI:85390 - 5'-AAGUGCAGAAGCGGUCAACCCAGUC-3'

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ChEBI Name 5'-AAGUGCAGAAGCGGUCAACCCAGUC-3' ChEBI ID CHEBI:85390 Definition A synthetic RNA fragment comprised of eight adenosine, seven guanosine, three uridine and seven cytidine residues connected by 3'→5' phosphodiester linkages in the sequence A-A-G-U-C-U-C-C-A-C-U-C-G-A-G-U-G-U-C-C-G-A-G-C-G. Stars This entity has been manually annotated by the ChEBI Team. Supplier Information Download Molfile XML SDF Find compounds which contain this structure Find compounds which resemble this structure Take structure to the Advanced Search Formula C240H298N102O168P24 Net Charge 0 Average Mass 8042.88700 Monoisotopic Mass 8039.16135 InChI InChI=1S/C240H298N102O168P24/c241-94-1-11-318(231(380)294-94)199-120(348)119(347)70(463-199)22-438-511(390,391)488-152-77(470-206(128(152)356)325-18-8-101(344)301-238(325)387)29-446-524(416,417)506-164-91(484-219(140(164)368)338-64-289-114-187(338)306-226(258)313-194(114)375)43-458-530(428,429)501-158-82(475-213(134(158)362)332-58-283-108-173(252)267-50-275-181(108)332)34-450-517(402,403)491-148-72(465-202(124(148)352)321-14-4-97(244)297-234(321)383)24-441-513(394,395)489-146-71(464-200(122(146)350)319-12-2-95(242)295-232(319)381)23-440-514(396,397)490-147-74(467-201(123(147)351)320-13-3-96(243)296-233(320)382)26-443-521(410,411)497-156-84(477-211(132(156)360)330-56-281-106-171(250)265-48-273-179(106)330)36-452-527(422,423)499-157-81(474-212(133(157)361)331-57-282-107-172(251)266-49-274-180(107)331)33-449-516(400,401)492-149-73(466-203(125(149)353)322-15-5-98(245)298-235(322)384)25-442-515(398,399)495-153-78(471-207(129(153)357)326-19-9-102(345)302-239(326)388)30-447-525(418,419)508-166-93(486-221(142(166)370)340-66-291-116-189(340)308-228(260)315-196(116)377)45-461-534(436,437)510-167-88(481-222(143(167)371)341-67-292-117-190(341)309-229(261)316-197(117)378)39-455-519(406,407)494-151-76(469-205(127(151)355)324-17-7-100(247)300-237(324)386)28-445-523(414,415)505-163-89(482-218(139(163)367)337-63-288-113-186(337)305-225(257)312-193(113)374)42-459-532(432,433)503-161-85(478-216(137(161)365)335-61-286-111-176(255)270-53-278-184(111)335)37-453-528(424,425)500-160-86(479-215(136(160)364)334-60-285-110-175(254)269-52-277-183(110)334)38-454-533(434,435)509-168-92(485-223(144(168)372)342-68-293-118-191(342)310-230(262)317-198(118)379)44-460-531(430,431)502-159-83(476-214(135(159)363)333-59-284-109-174(253)268-51-276-182(109)333)35-451-518(404,405)493-150-75(468-204(126(150)354)323-16-6-99(246)299-236(323)385)27-444-522(412,413)504-162-87(480-217(138(162)366)336-62-287-112-185(336)304-224(256)311-192(112)373)40-456-520(408,409)496-154-79(472-208(130(154)358)327-20-10-103(346)303-240(327)389)31-448-526(420,421)507-165-90(483-220(141(165)369)339-65-290-115-188(339)307-227(259)314-195(115)376)41-457-529(426,427)498-155-80(473-210(131(155)359)329-55-280-105-170(249)264-47-272-178(105)329)32-439-512(392,393)487-145-69(21-343)462-209(121(145)349)328-54-279-104-169(248)263-46-271-177(104)328/h1-20,46-93,119-168,199-223,343,347-372H,21-45H2,(H,390,391)(H,392,393)(H,394,395)(H,396,397)(H,398,399)(H,400,401)(H,402,403)(H,404,405)(H,406,407)(H,408,409)(H,410,411)(H,412,413)(H,414,415)(H,416,417)(H,418,419)(H,420,421)(H,422,423)(H,424,425)(H,426,427)(H,428,429)(H,430,431)(H,432,433)(H,434,435)(H,436,437)(H2,241,294,380)(H2,242,295,381)(H2,243,296,382)(H2,244,297,383)(H2,245,298,384)(H2,246,299,385)(H2,247,300,386)(H2,248,263,271)(H2,249,264,272)(H2,250,265,273)(H2,251,266,274)(H2,252,267,275)(H2,253,268,276)(H2,254,269,277)(H2,255,270,278)(H,301,344,387)(H,302,345,388)(H,303,346,389)(H3,256,304,311,373)(H3,257,305,312,374)(H3,258,306,313,375)(H3,259,307,314,376)(H3,260,308,315,377)(H3,261,309,316,378)(H3,262,310,317,379)/t69-,70-,71-,72-,73-,74-,75-,76-,77-,78-,79-,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91-,92-,93-,119-,120-,121-,122-,123-,124-,125-,126-,127-,128-,129-,130-,131-,132-,133-,134-,135-,136-,137-,138-,139-,140-,141-,142-,143-,144-,145-,146-,147-,148-,149-,150-,151-,152-,153-,154-,155-,156-,157-,158-,159-,160-,161-,162-,163-,164-,165-,166-,167-,168-,199-,200-,201-,202-,203-,204-,205-,206-,207-,208-,209-,210-,211-,212-,213-,214-,215-,216-,217-,218-,219-,220-,221-,222-,223-/m1/s1 InChIKey BAIGKUVQAPJKBU-CAIZWISUSA-N SMILES Nc1ccn([C@@H]2O[C@H](COP(O)(=O)O[C@@H]3[C@@H](COP(O)(=O)O[C@@H]4[C@@H](COP(O)(=O)O[C@@H]5[C@@H](COP(O)(=O)O[C@@H]6[C@@H](COP(O)(=O)O[C@@H]7[C@@H](COP(O)(=O)O[C@@H]8[C@@H](COP(O)(=O)O[C@@H]9[C@@H](COP(O)(=O)O[C@@H]%10[C@@H](COP(O)(=O)O[C@@H]%11[C@@H](COP(O)(=O)O[C@@H]%12[C@@H](COP(O)(=O)O[C@@H]%13[C@@H](COP(O)(=O)O[C@@H]%14[C@@H](COP(O)(=O)O[C@@H]%15[C@@H](COP(O)(=O)O[C@@H]%16[C@@H](COP(O)(=O)O[C@@H]%17[C@@H](COP(O)(=O)O[C@@H]%18[C@@H](COP(O)(=O)O[C@@H]%19[C@@H](COP(O)(=O)O[C@@H]%20[C@@H](COP(O)(=O)O[C@@H]%21[C@@H](COP(O)(=O)O[C@@H]%22[C@@H](COP(O)(=O)O[C@@H]%23[C@@H](COP(O)(=O)O[C@@H]%24[C@@H](COP(O)(=O)O[C@@H]%25[C@@H](COP(O)(=O)O[C@@H]%26[C@@H](CO)O[C@H]([C@@H]%26O)n%26cnc%27c(N)ncnc%26%27)O[C@H]([C@@H]%25O)n%25cnc%26c(N)ncnc%25%26)O[C@H]([C@@H]%24O)n%24cnc%25c%24nc(N)[nH]c%25=O)O[C@H]([C@@H]%23O)n%23ccc(=O)[nH]c%23=O)O[C@H]([C@@H]%22O)n%22cnc%23c%22nc(N)[nH]c%23=O)O[C@H]([C@@H]%21O)n%21ccc(N)nc%21=O)O[C@H]([C@@H]%20O)n%20cnc%21c(N)ncnc%20%21)O[C@H]([C@@H]%19O)n%19cnc%20c%19nc(N)[nH]c%20=O)O[C@H]([C@@H]%18O)n%18cnc%19c(N)ncnc%18%19)O[C@H]([C@@H]%17O)n%17cnc%18c(N)ncnc%17%18)O[C@H]([C@@H]%16O)n%16cnc%17c%16nc(N)[nH]c%17=O)O[C@H]([C@@H]%15O)n%15ccc(N)nc%15=O)O[C@H]([C@@H]%14O)n%14cnc%15c%14nc(N)[nH]c%15=O)O[C@H]([C@@H]%13O)n%13cnc%14c%13nc(N)[nH]c%14=O)O[C@H]([C@@H]%12O)n%12ccc(=O)[nH]c%12=O)O[C@H]([C@@H]%11O)n%11ccc(N)nc%11=O)O[C@H]([C@@H]%10O)n%10cnc%11c(N)ncnc%10%11)O[C@H]([C@@H]9O)n9cnc%10c(N)ncnc9%10)O[C@H]([C@@H]8O)n8ccc(N)nc8=O)O[C@H]([C@@H]7O)n7ccc(N)nc7=O)O[C@H]([C@@H]6O)n6ccc(N)nc6=O)O[C@H]([C@@H]5O)n5cnc6c(N)ncnc56)O[C@H]([C@@H]4O)n4cnc5c4nc(N)[nH]c5=O)O[C@H]([C@@H]3O)n3ccc(=O)[nH]c3=O)[C@@H](O)[C@H]2O)c(=O)n1 ChEBI Ontology Outgoing 5'-AAGUGCAGAAGCGGUCAACCCAGUC-3' (CHEBI:85390) is a RNA fragment (CHEBI:82726) IUPAC Name A-A-G-U-G-C-A-G-A-A-G-C-G-G-U-C-A-A-C-C-C-A-G-U-C Synonym Source ApApGpUpGpCpApGpApApGpCpGpGpUpCpApApCpCpCpApGpUpC ChEBI Citation Type Source 8612352 PubMed citation Europe PMC Last Modified 07 April 2015