AmiGO 2: Term Details for "mRNA 5'-splice site recognition" (GO:0000395)

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Term Information

Accession: GO:0000395
Name: mRNA 5'-splice site recognition
Ontology: biological_process
Synonyms: nuclear mRNA 5' splice site recognition, nuclear mRNA 5'-splice site recognition, U12-type nuclear mRNA 5' splice site recognition, U12-type nuclear mRNA 5'-splice site recognition, U2-type nuclear mRNA 5' splice site recognition, U2-type nuclear mRNA 5'-splice site recognition, spliceosomal CC complex biosynthesis, spliceosomal CC complex formation, spliceosomal E complex biosynthesis, spliceosomal E complex formation, spliceosomal commitment complex biosynthesis, spliceosomal commitment complex formation
Alternate IDs: GO:0000369, GO:0000368
Definition: Recognition of the intron 5'-splice site by components of the assembling spliceosome. Source: GOC:krc, ISBN:0879695897
Comment: Note that this step represents formation of the Commitment Complex (CC, in yeast) or the E complex (mammalian).
History: See term history for GO:0000395 at QuickGO
Chem. react.: None
Subset: None
Related: Link to all genes and gene products annotated to mRNA 5'-splice site recognition (excluding "regulates").; Link to all direct and indirect annotations to mRNA 5'-splice site recognition (excluding "regulates").; Link to all direct and indirect annotations download (limited to first 10,000) for mRNA 5'-splice site recognition (excluding "regulates").

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For more information, please see the ontology relation documentation.

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GO:0008150 biological_process
GO:0009987 cellular process
GO:0008152 metabolic process
GO:0071704 organic substance metabolic process
GO:0009058 biosynthetic process
GO:0044237 cellular metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:0044238 primary metabolic process
GO:0044249 cellular biosynthetic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0071840 cellular component organization or biogenesis
GO:0009059 macromolecule biosynthetic process
GO:0090304 nucleic acid metabolic process
GO:0006396 RNA processing
GO:0044085 cellular component biogenesis
GO:0016043 cellular component organization
GO:0010467 gene expression
GO:0016070 RNA metabolic process
GO:0008380 RNA splicing
GO:0022607 cellular component assembly
GO:0016071 mRNA metabolic process
GO:0043933 protein-containing complex organization
GO:0000375 RNA splicing, via transesterification reactions
GO:0006397 mRNA processing
GO:0000398 mRNA splicing, via spliceosome
GO:0065003 protein-containing complex assembly
GO:0022618 protein-RNA complex assembly
GO:0071826 protein-RNA complex organization
GO:0022613 ribonucleoprotein complex biogenesis
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
GO:0000245 spliceosomal complex assembly
GO:0045292 mRNA cis splicing, via spliceosome
GO:0006376 mRNA splice site recognition
GO:0000395 mRNA 5'-splice site recognition
GO:0034403 alignment of 3' and 5' splice sites of mRNA

Parents of mRNA 5'-splice site recognition (GO:0000395)

subject	relation	object
mRNA 5'-splice site recognition	is_a	mRNA splice site recognition (GO:0006376)
mRNA 5'-splice site recognition	BFO:0000050	mRNA cis splicing, via spliceosome (GO:0045292)

Children of mRNA 5'-splice site recognition (GO:0000395)

subject	relation	object
alignment of 3' and 5' splice sites of mRNA (GO:0034403)	is_a	mRNA 5'-splice site recognition

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