AmiGO 2: Term Details for "RNA polymerase V complex" (GO:0000419)

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Term Information

Accession: GO:0000419
Name: RNA polymerase V complex
Ontology: cellular_component
Synonyms: DNA-directed RNA polymerase IVb complex, DNA-directed RNA polymerase V complex
Alternate IDs: GO:0080137
Definition: RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits. Source: GOC:krc, PMID:16140984, GOC:mtg_sensu, PMID:19110459
Comment: None
History: See term history for GO:0000419 at QuickGO
Chem. react.: None
Subset: None
Related: Link to all genes and gene products annotated to RNA polymerase V complex (excluding "regulates").; Link to all direct and indirect annotations to RNA polymerase V complex (excluding "regulates").; Link to all direct and indirect annotations download (limited to first 10,000) for RNA polymerase V complex (excluding "regulates").

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CARO:0030000 biological entity
CARO:0000000 anatomical entity
UBERON:0001062 anatomical entity
CARO:0000006 material anatomical entity
CARO:0000003 connected anatomical structure
UBERON:0000465 material anatomical entity
UBERON:0000061 anatomical structure
GO:0008150 biological_process
GO:0005575 cellular_component
GO:0008152 metabolic process
GO:0003674 molecular_function
GO:0003824 catalytic activity
CL:0000000 cell
GO:0110165 cellular anatomical entity
GO:0044237 cellular metabolic process
GO:0009987 cellular process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0032991 protein-containing complex
GO:0009058 biosynthetic process
GO:0140640 catalytic activity, acting on a nucleic acid
GO:1902494 catalytic complex
GO:0006725 cellular aromatic compound metabolic process
GO:0044249 cellular biosynthetic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0046483 heterocycle metabolic process
GO:0005622 intracellular anatomical structure
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:0043226 organelle
GO:1901360 organic cyclic compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0044238 primary metabolic process
GO:0016740 transferase activity
GO:0016772 transferase activity, transferring phosphorus-containing groups
GO:0019438 aromatic compound biosynthetic process
GO:0140098 catalytic activity, acting on RNA
GO:0018130 heterocycle biosynthetic process
GO:0043229 intracellular organelle
GO:0009059 macromolecule biosynthetic process
GO:0043227 membrane-bounded organelle
GO:0043228 non-membrane-bounded organelle
GO:0090304 nucleic acid metabolic process
GO:0016779 nucleotidyltransferase activity
GO:1901362 organic cyclic compound biosynthetic process
GO:1990234 transferase complex
GO:0034062 5'-3' RNA polymerase activity
GO:0010467 gene expression
GO:0043231 intracellular membrane-bounded organelle
GO:0043232 intracellular non-membrane-bounded organelle
GO:0140535 intracellular protein-containing complex
GO:0141187 nucleic acid biosynthetic process
GO:0034654 nucleobase-containing compound biosynthetic process
PR:000050567 protein-containing material entity
GO:0032774 RNA biosynthetic process
GO:0016070 RNA metabolic process
GO:0097747 RNA polymerase activity
GO:0061695 transferase complex, transferring phosphorus-containing groups
GO:0005694 chromosome
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0006351 DNA-templated transcription
GO:0005634 nucleus
GO:0032993 protein-DNA complex
GO:0030880 RNA polymerase complex
GO:0000785 chromatin
GO:0000428 DNA-directed RNA polymerase complex
GO:0140513 nuclear protein-containing complex
GO:0001060 transcription by RNA polymerase V
GO:0055029 nuclear DNA-directed RNA polymerase complex
GO:0001058 RNA polymerase V activity
GO:0000419 RNA polymerase V complex

Parents of RNA polymerase V complex (GO:0000419)

subject	relation	object
RNA polymerase V complex	BFO:0000050	nucleus (GO:0005634)
RNA polymerase V complex	RO:0002215	RNA polymerase V activity (GO:0001058)
RNA polymerase V complex	is_a	nuclear DNA-directed RNA polymerase complex (GO:0055029)

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