AmiGO 2: Term Details for "RNA polymerase II promoter clearance" (GO:0001111)

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Term Information

Accession: GO:0001111
Name: RNA polymerase II promoter clearance
Ontology: biological_process
Synonyms: promoter clearance from RNA polymerase II promoter, promoter escape from RNA polymerase II promoter, promoter-paused RNA polymerase II release
Alternate IDs: None
Definition: A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase II, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors. Source: PMID:15020047, PMID:22982364, PMID:31628251, GOC:txnOH
Comment: None
History: See term history for GO:0001111 at QuickGO
Chem. react.: None
Subset: None
Related: Link to all genes and gene products annotated to RNA polymerase II promoter clearance (excluding "regulates").; Link to all direct and indirect annotations to RNA polymerase II promoter clearance (excluding "regulates").; Link to all direct and indirect annotations download (limited to first 10,000) for RNA polymerase II promoter clearance (excluding "regulates").

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For more information, please see the ontology relation documentation.

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GO:0008150 biological_process
GO:0008152 metabolic process
GO:0044237 cellular metabolic process
GO:0009987 cellular process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0009058 biosynthetic process
GO:0006725 cellular aromatic compound metabolic process
GO:0044249 cellular biosynthetic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0046483 heterocycle metabolic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0044238 primary metabolic process
GO:0019438 aromatic compound biosynthetic process
GO:0018130 heterocycle biosynthetic process
GO:0009059 macromolecule biosynthetic process
GO:0090304 nucleic acid metabolic process
GO:1901362 organic cyclic compound biosynthetic process
GO:0010467 gene expression
GO:0141187 nucleic acid biosynthetic process
GO:0034654 nucleobase-containing compound biosynthetic process
GO:0032774 RNA biosynthetic process
GO:0016070 RNA metabolic process
GO:0006351 DNA-templated transcription
GO:0001109 promoter clearance during DNA-templated transcription
GO:0006366 transcription by RNA polymerase II
GO:0001111 RNA polymerase II promoter clearance
GO:0140847 negative regulation of promoter clearance from RNA polymerase II promoter
GO:0140846 positive regulation of promoter clearance from RNA polymerase II promoter
GO:0140845 regulation of promoter clearance from RNA polymerase II promoter

Parents of RNA polymerase II promoter clearance (GO:0001111)

subject	relation	object
RNA polymerase II promoter clearance	BFO:0000050	transcription by RNA polymerase II (GO:0006366)
RNA polymerase II promoter clearance	is_a	promoter clearance during DNA-templated transcription (GO:0001109)

Children of RNA polymerase II promoter clearance (GO:0001111)

subject	relation	object
regulation of promoter clearance from RNA polymerase II promoter (GO:0140845)	RO:0002211	RNA polymerase II promoter clearance
negative regulation of promoter clearance from RNA polymerase II promoter (GO:0140847)	RO:0002212	RNA polymerase II promoter clearance
positive regulation of promoter clearance from RNA polymerase II promoter (GO:0140846)	RO:0002213	RNA polymerase II promoter clearance

RNA polymerase II promoter clearance