AmiGO 2: Term Details for "intronic transcription regulatory region sequence-specific DNA binding" (GO:0001161)

Term Information

Accession: GO:0001161
Name: intronic transcription regulatory region sequence-specific DNA binding
Ontology: molecular_function
Synonyms: intronic transcription regulatory region DNA binding
Alternate IDs: GO:0044213
Definition: Binding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within. Source: GOC:txnOH
Comment: To minimize ambiguity in the use of the word "promoter" in GO, we have chosen the phrase "transcription regulatory region" to refer to all of the regulatory regions. Regulatory regions in the DNA which control initiation may include the "core promoter" where the basal transcription machinery binds, the "core promoter proximal region" where regulatory factors other than the basal machinery bind. There are also additional regulatory regions, in both the DNA and the RNA transcript, which regulate elongation or termination of transcription.
History: See term history for GO:0001161 at QuickGO
Chem. react.: None
Subset: None
Related: Link to all genes and gene products annotated to intronic transcription regulatory region sequence-specific DNA binding (excluding "regulates").; Link to all direct and indirect annotations to intronic transcription regulatory region sequence-specific DNA binding (excluding "regulates").; Link to all direct and indirect annotations download (limited to first 10,000) for intronic transcription regulatory region sequence-specific DNA binding (excluding "regulates").

Include "regulates"
For more information, please see the ontology relation documentation.

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GO:0003674 molecular_function
GO:0005488 binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0097159 organic cyclic compound binding
GO:0003690 double-stranded DNA binding
GO:0043565 sequence-specific DNA binding
GO:1990837 sequence-specific double-stranded DNA binding
GO:0001067 transcription regulatory region nucleic acid binding
GO:0000976 transcription cis-regulatory region binding
GO:0001161 intronic transcription regulatory region sequence-specific DNA binding
GO:0001162 RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding

Parents of intronic transcription regulatory region sequence-specific DNA binding (GO:0001161)

subject	relation	object
intronic transcription regulatory region sequence-specific DNA binding	is_a	transcription cis-regulatory region binding (GO:0000976)

Children of intronic transcription regulatory region sequence-specific DNA binding (GO:0001161)

subject	relation	object
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding (GO:0001162)	is_a	intronic transcription regulatory region sequence-specific DNA binding

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