AmiGO 2: Term Details for "U2-type catalytic step 1 spliceosome" (GO:0071006)

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Term Information

Accession: GO:0071006
Name: U2-type catalytic step 1 spliceosome
Ontology: cellular_component
Synonyms: U2-type activated spliceosome, major catalytic step 1 spliceosome, GT-AG catalytic step 1 spliceosome, mammalian U2-type spliceosomal complex B*, mammalian U2-type spliceosomal complex B2, yeast U2-type spliceosomal complex A1
Alternate IDs: None
Definition: A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs. Source: GOC:krc, PMID:19239890, GOC:ab, ISBN:0879695897, GOC:mah, PMID:18322460, ISBN:0879697393
Comment: None
History: See term history for GO:0071006 at QuickGO
Chem. react.: None
Subset: None
Related: Link to all genes and gene products annotated to U2-type catalytic step 1 spliceosome (excluding "regulates").; Link to all direct and indirect annotations to U2-type catalytic step 1 spliceosome (excluding "regulates").; Link to all direct and indirect annotations download (limited to first 10,000) for U2-type catalytic step 1 spliceosome (excluding "regulates").

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For more information, please see the ontology relation documentation.

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CARO:0030000 biological entity
CARO:0000000 anatomical entity
UBERON:0001062 anatomical entity
GO:0008150 biological_process
CARO:0000006 material anatomical entity
GO:0008152 metabolic process
GO:0044237 cellular metabolic process
GO:0009987 cellular process
CARO:0000003 connected anatomical structure
UBERON:0000465 material anatomical entity
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
UBERON:0000061 anatomical structure
GO:0009058 biosynthetic process
GO:0006725 cellular aromatic compound metabolic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0005575 cellular_component
GO:0046483 heterocycle metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:0044238 primary metabolic process
CL:0000000 cell
GO:0110165 cellular anatomical entity
GO:0044249 cellular biosynthetic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0005622 intracellular anatomical structure
GO:0009059 macromolecule biosynthetic process
GO:0090304 nucleic acid metabolic process
GO:0043226 organelle
GO:0010467 gene expression
GO:0043229 intracellular organelle
GO:0043227 membrane-bounded organelle
GO:0016070 RNA metabolic process
GO:0003824 catalytic activity
GO:0043231 intracellular membrane-bounded organelle
GO:0006396 RNA processing
GO:0140640 catalytic activity, acting on a nucleic acid
GO:0003674 molecular_function
GO:0005634 nucleus
GO:0032991 protein-containing complex
PR:000050567 protein-containing material entity
GO:0008380 RNA splicing
GO:0140098 catalytic activity, acting on RNA
GO:0140513 nuclear protein-containing complex
GO:1990904 ribonucleoprotein complex
GO:0000375 RNA splicing, via transesterification reactions
GO:1902494 catalytic complex
GO:0000384 first spliceosomal transesterification activity
GO:0005681 spliceosomal complex
GO:0071012 catalytic step 1 spliceosome
GO:0005684 U2-type spliceosomal complex
GO:0071006 U2-type catalytic step 1 spliceosome

Parents of U2-type catalytic step 1 spliceosome (GO:0071006)

subject	relation	object
U2-type catalytic step 1 spliceosome	is_a	U2-type spliceosomal complex (GO:0005684)
U2-type catalytic step 1 spliceosome	BFO:0000051	U6 snRNP (GO:0005688)
U2-type catalytic step 1 spliceosome	BFO:0000051	U2 snRNP (GO:0005686)
U2-type catalytic step 1 spliceosome	is_a	catalytic step 1 spliceosome (GO:0071012)

This term has no children.