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Protein Ontology report - tumor necrosis factor isoform 1
PR:000000381 -
http://purl.obolibrary.org/obo/PR_000000381
Protein Forms
Annotations
Ontology Information
Show OBO stanza
PRO ID
PR:000000381
PRO name
tumor necrosis factor isoform 1
Synonyms
PRO-Short-label
:
EXACT:
TNF/iso:1
Definition
"A tumor necrosis factor that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by
UniProtKB:P01375-1
or a 1:1 ortholog thereof." [PRO:CNA, PRO:DAN]
PRO Category
sequence
Parent
PR:000000134
tumor necrosis factor
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Sequence
1
Organism-Sequence
2
Modification
6
Organism-Modification
5
Term Hierarchy
Visualization
DAG:
OLS:
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Protein Forms
Switch to
Extended View
Category
PRO Form Name
Ann.
Has Annotation?
Comp.
In Complex?
sequence
PR:000000381
tumor necrosis factor isoform 1, TNF/iso:1
organism-sequence
PR:P01375-1
tumor necrosis factor isoform 1 (human), hTNF/iso:1
Yes
organism-modification
PR:000036504
tumor necrosis factor isoform 1 cleaved 1 (human), hTNF/iso:1/Clv:1
Yes
organism-modification
PR:000036507
tumor necrosis factor isoform 1 myristoylated 1 (human), hTNF/iso:1/Myr:1
Yes
organism-modification
PR:000036508
tumor necrosis factor isoform 1 phosphorylated 1 (human), hTNF/iso:1/Phos:1
Yes
organism-sequence
PR:P06804-1
tumor necrosis factor isoform 1 (mouse), mTNF/iso:1
organism-modification
PR:000036505
tumor necrosis factor isoform 1 cleaved 1 (mouse), mTNF/iso:1/Clv:1
Yes
organism-modification
PR:000036506
tumor necrosis factor isoform 1 cleaved 2 (mouse), mTNF/iso:1/Clv:2
Yes
modification
PR:000000496
tumor necrosis factor isoform 1 myristoylated form, TNF/iso:1/MyrRes+
modification
PR:000000606
tumor necrosis factor isoform 1 myristoylated 1, TNF/iso:1/Myr:1
organism-modification
PR:000036507
tumor necrosis factor isoform 1 myristoylated 1 (human), hTNF/iso:1/Myr:1
Yes
modification
PR:000000497
tumor necrosis factor isoform 1 phosphorylated form, TNF/iso:1/PhosRes+
modification
PR:000000607
tumor necrosis factor isoform 1 phosphorylated 1, TNF/iso:1/Phos:1
organism-modification
PR:000036508
tumor necrosis factor isoform 1 phosphorylated 1 (human), hTNF/iso:1/Phos:1
Yes
modification
PR:000000604
tumor necrosis factor isoform 1 cleaved 1, TNF/iso:1/Clv:1
organism-modification
PR:000036504
tumor necrosis factor isoform 1 cleaved 1 (human), hTNF/iso:1/Clv:1
Yes
organism-modification
PR:000036505
tumor necrosis factor isoform 1 cleaved 1 (mouse), mTNF/iso:1/Clv:1
Yes
modification
PR:000000605
tumor necrosis factor isoform 1 cleaved 2, TNF/iso:1/Clv:2
organism-modification
PR:000036506
tumor necrosis factor isoform 1 cleaved 2 (mouse), mTNF/iso:1/Clv:2
Yes
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Functional Annotation (PRO-centric view)
Switch to
GO Centric View
PRO Term
GO Annotation
Evidence
PR:000036504
hTNF/iso:1/Clv:1
UniProtKB:P01375-1, 77-233 | PRO_0000034424
"A tumor necrosis factor isoform 1 cleaved 1 in human. UniProtKB:P01375-1, 77-233." [PMID:14512626, PMID:3856324, PRO:CNA]
acts_upstream_of_or_within
GO:0006915
apoptotic process
PMID:3856324
enables
GO:0005164
tumor necrosis factor receptor binding
with
PR:P19438
CD120a (human)
PMID:14512626
GO:0042802
identical protein binding
PMID:14512626
PR:000036505
mTNF/iso:1/Clv:1
UniProtKB:P06804-1, 80-235 | PRO_0000034436
"A tumor necrosis factor isoform 1 cleaved 1 in mouse. UniProtKB:P06804-1, 80-235." [PMID:10089307, PMID:9305915, PRO:CNA]
acts_upstream_of_or_within
GO:0006355
regulation of DNA-templated transcription
PMID:9305915
located_in
GO:0005615
extracellular space
PMID:10089307
PR:000036506
mTNF/iso:1/Clv:2
UniProtKB:P06804-1, 70-235
"A tumor necrosis factor isoform 1 cleaved 2 in mouse. UniProtKB:P06804-1, 70-235." [PMID:2777790, PRO:CNA]
enables
NOT
GO:0005125
cytokine activity
PMID:2777790
located_in
GO:0005576
extracellular region
PMID:2777790
PR:000036507
hTNF/iso:1/Myr:1
UniProtKB:P01375-1, Lys-19/Lys-20, MOD:00087
"A tumor necrosis factor isoform 1 myristoylated 1 in human. UniProtKB:P01375-1, Lys-19/Lys-20, MOD:00087." [PMID:1402651, PRO:CNA]
located_in
GO:0016020
membrane
PMID:1402651
PR:000036508
hTNF/iso:1/Phos:1
UniProtKB:P01375-1, Ser-2, MOD:00046
"A tumor necrosis factor isoform 1 phosphorylated 1 in human. UniProtKB:P01375-1, Ser-2, MOD:00046." [PMID:10205166, PMID:8597870, PRO:CNA]
located_in
GO:0016020
membrane
PMID:10205166
PR:P01375-1
hTNF/iso:1
"A tumor necrosis factor isoform 1 that is encoded in the genome of human." [PRO:CNA]
acts_upstream_of_or_within
GO:0006915
apoptotic process
PMID:3856324
located_in
GO:0005886
plasma membrane
PMID:3349526