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RACE-PRO
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Documentation
Protein Ontology report - melanopsin
PR:000001243 -
http://purl.obolibrary.org/obo/PR_000001243
Protein Forms
Annotations
Ontology Information
Show OBO stanza
PRO ID
PR:000001243
PRO name
melanopsin
Synonyms
PRO-Short-label
:
EXACT:
OPN4
Gene-based
:
RELATED:
MOP | Mopn
Other
:
EXACT:
opsin-4
Definition
"An animal opsin that is a translation product of the human OPN4 gene or a 1:1 ortholog thereof." [PRO:WCB]
PRO Category
gene
Parent
PR:000001119
animal opsin
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Gene
1
Organism-Gene
4
Sequence
2
Organism-Sequence
4
Modification
0
Organism-Modification
0
Term Hierarchy
Visualization
DAG:
OLS:
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Related Cross References
Db identifiers
IUPHARobj:2758
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Protein Forms
Switch to
Extended View
Category
PRO Form Name
Ann.
Has Annotation?
Comp.
In Complex?
gene
PR:000001243
melanopsin, OPN4
organism-gene
PR:P08099
opsin Rh2 (fruit fly), fly-OPN4
organism-gene
PR:Q8R456
melanopsin (rat), rOPN4
organism-gene
PR:Q9QXZ9
melanopsin (mouse), mOPN4
organism-sequence
PR:Q9QXZ9-1
melanopsin isoform 1 (mouse), mOPN4/iso:1
Yes
organism-sequence
PR:Q9QXZ9-2
melanopsin isoform 2 (mouse), mOPN4/iso:2
Yes
organism-gene
PR:Q9UHM6
melanopsin (human), hOPN4
organism-sequence
PR:Q9UHM6-1
melanopsin isoform h1 (human), hOPN4/iso:h1
organism-sequence
PR:Q9UHM6-2
melanopsin isoform h2 (human), hOPN4/iso:h2
sequence
PR:000035677
melanopsin isoform 1, OPN4/iso:1
organism-sequence
PR:Q9QXZ9-1
melanopsin isoform 1 (mouse), mOPN4/iso:1
Yes
sequence
PR:000035679
melanopsin isoform 2, OPN4/iso:2
organism-sequence
PR:Q9QXZ9-2
melanopsin isoform 2 (mouse), mOPN4/iso:2
Yes
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Functional Annotation (PRO-centric view)
Switch to
GO Centric View
PRO Term
GO Annotation
Evidence
PR:Q9QXZ9-1
mOPN4/iso:1
melanopsin 4 long form (mouse) | Opn4L (mouse)
"A melanopsin isoform 1 that is encoded in the genome of mouse." [PMID:10632589, PMID:19793992, PRO:HJD]
acts_upstream_of_or_within
GO:0016056
rhodopsin mediated signaling pathway
MGI:4438311
;
PMID:19793992
enables
GO:0008020
G protein-coupled photoreceptor activity
MGI:4438311
;
PMID:19793992
located_in
GO:0005886
plasma membrane
MGI:4438311
;
PMID:19793992
PR:Q9QXZ9-2
mOPN4/iso:2
melanopsin 4 short form (mouse) | Opn4S (mouse)
"A melanopsin isoform 2 that is encoded in the genome of mouse." [PMID:19793992, PRO:HJD]
acts_upstream_of_or_within
GO:0016056
rhodopsin mediated signaling pathway
MGI:4438311
;
PMID:19793992
enables
GO:0008020
G protein-coupled photoreceptor activity
MGI:4438311
;
PMID:19793992
located_in
GO:0005886
plasma membrane
MGI:4438311
;
PMID:19793992
