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Protein Ontology report - lysine-specific histone demethylase 2
PR:000003320 - http://purl.obolibrary.org/obo/PR_000003320
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000003320   
  PRO namelysine-specific histone demethylase 2 
  Synonyms
PRO-Short-label: EXACT:KDM1B
Gene-based: RELATED:AOF1 | C6orf193 | LSD2
Other: EXACT:flavin-containing amine oxidase domain-containing protein 1 | lysine-specific histone demethylase 1B
  Definition"A protein that is a translation product of the human KDM1B gene or a 1:1 ortholog thereof." [MGI:2145261, PRO:HJD] 
  PRO Categorygene 
  ParentPR:000000001
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 4                                        
         Sequence1                                                  Organism-Sequence 6                                        
         Modification0                                                  Organism-Modification 1                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Related Cross References

  Db identifiers
IUPHARobj:2670
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Protein Forms  Switch to Extended View   

Category  
PRO Form Name
Ann. Has Annotation?

Comp. In Complex?
gene


PR:000003320 lysine-specific histone demethylase 2, KDM1B

organism-gene


PR:P50264 polyamine oxidase FMS1 (yeast), yKDM1B

organism-gene


PR:Q21988 lysine-specific histone demethylase 1B homolog (worm), KDM1B (worm)

organism-gene


PR:Q8CIG3 lysine-specific histone demethylase 1B (mouse), mKDM1B
Yes
organism-sequence


PR:Q8CIG3-1 lysine-specific histone demethylase 1B isoform 1 (mouse), mKDM1B/iso:1
Yes
organism-sequence


PR:Q8CIG3-2 lysine-specific histone demethylase 1B isoform m2 (mouse), mKDM1B/iso:m2

organism-sequence


PR:Q8CIG3-3 lysine-specific histone demethylase 1B isoform m3 (mouse), mKDM1B/iso:m3

organism-gene


PR:Q8NB78 lysine-specific histone demethylase 2 (human), hKDM1B

organism-sequence


PR:Q8NB78-1 lysine-specific histone demethylase 2 isoform 1 (human), hKDM1B/iso:1

organism-sequence


PR:Q8NB78-2 lysine-specific histone demethylase 2 isoform h2 (human), hKDM1B/iso:h2

organism-sequence


PR:Q8NB78-4 lysine-specific histone demethylase 2 isoform h4 (human), hKDM1B/iso:h4

organism-modification


PR:000068653 lysine-specific histone demethylase 2 deaminated 1 (human), hKDM1B/Deam:1

sequence


PR:000003321 lysine-specific histone demethylase 2 isoform 1, KDM1B/iso:1

organism-sequence


PR:Q8CIG3-1 lysine-specific histone demethylase 1B isoform 1 (mouse), mKDM1B/iso:1
Yes
organism-sequence


PR:Q8NB78-1 lysine-specific histone demethylase 2 isoform 1 (human), hKDM1B/iso:1

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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q8CIG3
mKDM1B
Aof1 | Kdm1b | Lsd2 | flavin-containing amine oxidase domain-containing protein 1 (mouse) | lysine-specific histone demethylase 2 (mouse)		 acts_upstream_of_or_withinGO:0071514 genomic imprinting PMID:19727073
PR:Q8CIG3-1
mKDM1B/iso:1
 acts_upstream_of_or_withinGO:0034720 histone H3-K4 demethylation PMID:19727073
enablesGO:0008270 zinc ion binding PMID:19407342
GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity PMID:19727073
GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity PMID:19727073
GO:0034720 histone H3-K4 demethylation PMID:19727073
GO:0050660 flavin adenine dinucleotide binding PMID:19407342
located_inGO:0005634 nucleus PMID:19727073