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Protein Ontology report - regulator of nonsense transcripts 1
PR:000017108 - http://purl.obolibrary.org/obo/PR_000017108
 
  Protein Forms  Annotations      
Ontology Information Show OBO stanza
  PRO ID
PR:000017108   
  PRO nameregulator of nonsense transcripts 1 
  Synonyms
PRO-Short-label: EXACT:UPF1
Gene-based: RELATED:KIAA0221 | RENT1
Other: EXACT:ATP-dependent helicase RENT1 | nonsense mRNA reducing factor 1 | NORF1 | up-frameshift suppressor 1 homolog | Upf1
  Definition"A protein that is a translation product of the human UPF1 gene or a 1:1 ortholog thereof." [PRO:DNx] 
  PRO Categorygene 
  ParentPR:000000001 protein
  Terms by PRO Category
Organism-Independent Organism-Specific
         Category          Number of Terms          Category          Number of Terms
         Gene1                                                  Organism-Gene 9                                        
         Sequence2                                                  Organism-Sequence 4                                        
         Modification0                                                  Organism-Modification 10                                        
  Term Hierarchy
  Visualization
DAG: OLS:
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Protein Forms  Switch to Extended View   

Category  

PRO Form Name

Ann. Has Annotation?

Comp. In Complex?
gene



PR:000017108 regulator of nonsense transcripts 1, UPF1


organism-gene



PR:F1RCY6 regulator of nonsense transcripts 1 (zebrafish), z-UPF1


organism-gene



PR:O76512 regulator of nonsense transcripts 1 (worm), UPF1 (worm)


organism-gene



PR:P30771 ATP-dependent helicase NAM7 (yeast), yUPF1


organism-gene



PR:Q09820 ATP-dependent helicase upf1 (Schizosaccharomyces pombe 972h-), Spom972h-UPF1


organism-gene



PR:Q54I89 regulator of nonsense transcripts 1 (Dictyostelium discoideum), Dicty-UPF1


organism-gene



PR:Q92900 regulator of nonsense transcripts 1 (human), hUPF1


organism-sequence



PR:Q92900-1 regulator of nonsense transcripts 1 isoform 1 (human), hUPF1/iso:1


organism-sequence



PR:Q92900-2 regulator of nonsense transcripts 1 isoform 2 (human), hUPF1/iso:2

Yes

organism-modification



PR:000049622 regulator of nonsense transcripts 1 phosphorylated 1 (human), hUPF1/Phos:1


organism-modification



PR:000071124 regulator of nonsense transcripts 1 deaminated 1 (human), hUPF1/Deam:1


organism-modification



PR:000072368 regulator of nonsense transcripts 1 cysteinylated 1 (human), hUPF1/Cyst:1


organism-modification



PR:000072759 regulator of nonsense transcripts 1 cysteinylated 2 (human), hUPF1/Cyst:2


organism-modification



PR:000073311 regulator of nonsense transcripts 1 deaminated 2 (human), hUPF1/Deam:2


organism-modification



PR:000074861 regulator of nonsense transcripts 1 methylated 1 (human), hUPF1/Me:1


organism-modification



PR:000076607 regulator of nonsense transcripts 1 methylated 2 (human), hUPF1/Me:2


organism-modification



PR:000080473 regulator of nonsense transcripts 1 methylated 3 (human), hUPF1/Me:3


organism-modification



PR:000080541 regulator of nonsense transcripts 1 methylated 4 (human), hUPF1/Me:4


organism-modification



PR:000083032 regulator of nonsense transcripts 1 deaminated 3 (human), hUPF1/Deam:3


organism-gene



PR:Q9EPU0 regulator of nonsense transcripts 1 (mouse), mUPF1


organism-sequence



PR:Q9EPU0-1 regulator of nonsense transcripts 1 isoform 1 (mouse), mUPF1/iso:1


organism-sequence



PR:Q9EPU0-2 regulator of nonsense transcripts 1 isoform 2 (mouse), mUPF1/iso:2


organism-gene



PR:Q9FJR0 regulator of nonsense transcripts 1 homolog (Arabidopsis thaliana), At-UPF1


organism-gene



PR:Q9VYS3 regulator of nonsense transcripts 1 homolog (fruit fly), fly-UPF1


sequence



PR:000026502 regulator of nonsense transcripts 1 isoform 1, UPF1/iso:1


organism-sequence



PR:Q92900-1 regulator of nonsense transcripts 1 isoform 1 (human), hUPF1/iso:1


organism-sequence



PR:Q9EPU0-1 regulator of nonsense transcripts 1 isoform 1 (mouse), mUPF1/iso:1


sequence



PR:000026504 regulator of nonsense transcripts 1 isoform 2, UPF1/iso:2


organism-sequence



PR:Q92900-2 regulator of nonsense transcripts 1 isoform 2 (human), hUPF1/iso:2

Yes

organism-sequence



PR:Q9EPU0-2 regulator of nonsense transcripts 1 isoform 2 (mouse), mUPF1/iso:2


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Functional Annotation (PRO-centric view) Switch to GO Centric View   
PRO Term GO Annotation Evidence
PR:Q92900-2 hUPF1/iso:2

"A regulator of nonsense transcripts 1 isoform 2 that is encoded in the genome of human." [PMID:18423202]
enablesGO:0005515 protein binding with PR:Q14152 eIF-3-theta (human) PMID:18423202