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Protein Ontology report - retinoic acid receptor alpha (mouse)
PR:P11416 -
http://purl.obolibrary.org/obo/PR_P11416
Protein Forms
Annotations
Ontology Information
Show OBO stanza
/
PAF
/
GPI
PRO ID
PR:P11416
PRO name
retinoic acid receptor alpha (mouse)
Synonyms
PRO-Short-label
:
EXACT:
mRARA
Gene-based
:
RELATED:
Nr1b1 | Rara
Other
:
EXACT:
nuclear receptor subfamily 1 group B member 1 (mouse) | RAR-alpha (mouse)
Definition
"A retinoic acid receptor alpha that is encoded in the genome of mouse." [
OMA:P11416
, PRO:DNx]
PRO Category
organism-gene
Parent
PR:000013736
retinoic acid receptor alpha
PR:000029032
Mus musculus protein
Gene Template
MGI:97856
Rara (mouse)
Taxon
NCBITaxon:10090
Mus musculus
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Gene
0
Organism-Gene
1
Sequence
0
Organism-Sequence
2
Modification
0
Organism-Modification
1
Term Hierarchy
Visualization
DAG:
OLS:
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Related Cross References
Db identifiers
UniProtKB:P11416
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Protein Forms
Switch to
Extended View
Category
PRO Form Name
Ann.
Has Annotation?
Comp.
In Complex?
organism-gene
PR:P11416
retinoic acid receptor alpha (mouse), mRARA
Yes
organism-sequence
PR:P11416-1
retinoic acid receptor alpha isoform 1 (mouse), mRARA/iso:1
Yes
organism-modification
PR:000026077
retinoic acid receptor alpha isoform 1 phosphorylated 1 (mouse), mRARA/iso:1/Phos:1
organism-sequence
PR:P11416-2
retinoic acid receptor alpha isoform Alpha-2 (mouse), mRARA/iso:Alpha-2
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Functional Annotation (PRO-centric view)
Switch to
GO Centric View
PRO Term
GO Annotation
Evidence
PR:P11416
mRARA
Nr1b1 | Rara | nuclear receptor subfamily 1 group B member 1 (mouse) | RAR-alpha (mouse)
"A retinoic acid receptor alpha that is encoded in the genome of mouse." [OMA:P11416, PRO:DNx]
acts_upstream_of_or_within
GO:0000122
negative regulation of transcription by RNA polymerase II
PMID:7566114
GO:0001657
ureteric bud development
PMID:12195422
GO:0007283
spermatogenesis
MGI:61760
;
PMID:8394014
GO:0008284
positive regulation of cell population proliferation
PMID:18026104
GO:0010629
negative regulation of gene expression
PMID:18026104
GO:0030852
regulation of granulocyte differentiation
PMID:11222375
GO:0032526
response to retinoic acid
PMID:11222375
GO:0045944
positive regulation of transcription by RNA polymerase II
PMID:7823919
GO:0045944
positive regulation of transcription by RNA polymerase II
PMID:7823919
GO:0055012
ventricular cardiac muscle cell differentiation
PMID:9428411
enables
GO:0043565
sequence-specific DNA binding
PMID:7823919
PR:P11416-1
mRARA/iso:1
mRARalpha1
"A retinoic acid receptor alpha isoform 1 that is encoded in the genome of mouse." [PRO:HJD]
acts_upstream_of_or_within
GO:0000122
negative regulation of transcription by RNA polymerase II
PMID:8152920
GO:0006355
regulation of DNA-templated transcription
PMID:12101409
GO:0006355
regulation of DNA-templated transcription
PMID:12101409
GO:0045892
negative regulation of DNA-templated transcription
PMID:11641275
GO:0045947
negative regulation of translational initiation
MGI:3803427
;
PMID:18495661
enables
GO:0000977
RNA polymerase II transcription regulatory region sequence-specific DNA binding
MGI:3053708
;
PMID:1655807
GO:0003677
DNA binding
PMID:15528198
GO:0003677
DNA binding
PMID:15528198
GO:0003700
DNA-binding transcription factor activity
PMID:8152920
GO:0003700
DNA-binding transcription factor activity
PMID:8152920
GO:0004879
nuclear receptor activity
PMID:15322135
GO:0004879
nuclear receptor activity
PMID:15322135
GO:0005515
protein binding
PMID:10531331
GO:0005515
protein binding
PMID:10531331
GO:0043565
sequence-specific DNA binding
PMID:17928865
located_in
GO:0005634
nucleus
with
CHEBI:15367
PMID:12079996
GO:0005737
cytoplasm
PMID:12079996
GO:0030425
dendrite
MGI:3803427
;
PMID:18495661
GO:0043025
neuronal cell body
MGI:3803427
;
PMID:18495661
