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Protein Ontology report - retinoic acid receptor alpha isoform 1 (mouse)
PR:P11416-1 -
http://purl.obolibrary.org/obo/PR_P11416-1
Protein Forms
Annotations
Ontology Information
Show OBO stanza
/
PAF
/
GPI
PRO ID
PR:P11416-1
PRO name
retinoic acid receptor alpha isoform 1 (mouse)
Synonyms
PRO-Short-label
:
EXACT:
mRARA/iso:1
Other
:
EXACT:
mRARalpha1
Definition
"A retinoic acid receptor alpha isoform 1 that is encoded in the genome of mouse." [PRO:HJD]
PRO Category
organism-sequence
Parent
PR:000022009
retinoic acid receptor alpha isoform 1
PR:P11416
retinoic acid receptor alpha (mouse)
Taxon
NCBITaxon:10090
Mus musculus
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Sequence
0
Organism-Sequence
1
Modification
0
Organism-Modification
1
Term Hierarchy
Visualization
DAG:
OLS:
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Related Cross References
Db identifiers
UniProtKB:P11416-1
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Protein Forms
Switch to
Extended View
Category
PRO Form Name
Ann.
Has Annotation?
Comp.
In Complex?
organism-sequence
PR:P11416-1
retinoic acid receptor alpha isoform 1 (mouse), mRARA/iso:1
Yes
organism-modification
PR:000026077
retinoic acid receptor alpha isoform 1 phosphorylated 1 (mouse), mRARA/iso:1/Phos:1
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Functional Annotation (PRO-centric view)
Switch to
GO Centric View
PRO Term
GO Annotation
Evidence
PR:P11416-1
mRARA/iso:1
mRARalpha1
"A retinoic acid receptor alpha isoform 1 that is encoded in the genome of mouse." [PRO:HJD]
acts_upstream_of_or_within
GO:0000122
negative regulation of transcription by RNA polymerase II
PMID:8152920
GO:0006355
regulation of DNA-templated transcription
PMID:12101409
GO:0006355
regulation of DNA-templated transcription
PMID:12101409
GO:0045892
negative regulation of DNA-templated transcription
PMID:11641275
GO:0045947
negative regulation of translational initiation
MGI:3803427
;
PMID:18495661
enables
GO:0000977
RNA polymerase II transcription regulatory region sequence-specific DNA binding
MGI:3053708
;
PMID:1655807
GO:0003677
DNA binding
PMID:15528198
GO:0003677
DNA binding
PMID:15528198
GO:0003700
DNA-binding transcription factor activity
PMID:8152920
GO:0003700
DNA-binding transcription factor activity
PMID:8152920
GO:0004879
nuclear receptor activity
PMID:15322135
GO:0004879
nuclear receptor activity
PMID:15322135
GO:0005515
protein binding
PMID:10531331
GO:0005515
protein binding
PMID:10531331
GO:0043565
sequence-specific DNA binding
PMID:17928865
located_in
GO:0005634
nucleus
with
CHEBI:15367
PMID:12079996
GO:0005737
cytoplasm
PMID:12079996
GO:0030425
dendrite
MGI:3803427
;
PMID:18495661
GO:0043025
neuronal cell body
MGI:3803427
;
PMID:18495661
