* BSPO:$sequence(7,0,999999999)$ 24:07:2019 14:15 spatial 1.2 based on FBql definition term replaced by synonym typically used in the context of human anatomy synonym typically used in the context of vertebrate anatomy namespace-id-rule synonym_type_property database_cross_reference has_exact_synonym has_narrow_synonym has_obo_format_version has_obo_namespace has_related_synonym has_scope has_synonym_type shorthand http://www.w3.org/2000/01/rdf-schema#seeAlso spatial seeAlso true seeAlso see also BFO:0000050 spatial part_of part_of part of BFO:0000051 spatial has_part has_part has part BSPO:0000095 spatial anatomical_relation anatomical_relation anatomical relation true x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. BSPO:0000096 rostral_to spatial anterior_to anterior_to anterior to x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. BSPO:cjm x distal to y iff x is further along the proximo-distal axis than y, towards the appendage tip. A proximo-distal axis extends from tip of an appendage (distal) to where it joins the body (proximal). BSPO:0000097 spatial distal_to distal_to distal to x distal to y iff x is further along the proximo-distal axis than y, towards the appendage tip. A proximo-distal axis extends from tip of an appendage (distal) to where it joins the body (proximal). BSPO:cjm x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). BSPO:0000098 spatial dorsal_to dorsal_to dorsal to x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). BSPO:cjm x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. BSPO:0000099 caudal to spatial posterior_to posterior_to posterior to x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. BSPO:cjm caudal to x proximal to y iff x is closer to the point of attachment with the body than y. BSPO:0000100 spatial proximal_to proximal_to The elbow is proximal to the hand, but distal to the shoulder. proximal to x proximal to y iff x is closer to the point of attachment with the body than y. BSPO:cjm RO:0002221 BSPO:0000101 spatial obsolete_surrounds obsolete_surrounds obsolete surrounds true x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). BSPO:0000102 spatial ventral_to ventral_to ventral to x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). BSPO:cjm BSPO:0000103 spatial vicinity_of vicinity_of vicinity of Crosses at an angle that is 90 degrees, or close to 90 degrees. In any non-linear organism, the main axes are rarely perpendicular when taken through the organism as a whole. BSPO:0000104 spatial approximately_perpendicular_to approximately_perpendicular_to approximately perpendicular to Crosses at an angle that is 90 degrees, or close to 90 degrees. In any non-linear organism, the main axes are rarely perpendicular when taken through the organism as a whole. BSPO:cjm On the same side as. For example, the left arm is ipsilateral to the left leg. BSPO:0000105 spatial ipsilateral_to ipsilateral_to ipsilateral to On the same side as. For example, the left arm is ipsilateral to the left leg. BSPO:cjm On the opposite side from. For example, the left arm is contralateral to the right arm (and the right leg). BSPO:0000106 spatial contralateral_to contralateral_to contralateral to On the opposite side from. For example, the left arm is contralateral to the right arm (and the right leg). BSPO:cjm Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines. BSPO:0000107 spatial deep_to deep_to deep to Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines. BSPO:cjm Near the outer surface of the organism. Thus, skin is superficial to the muscle layer. BSPO:0000108 spatial superficial_to superficial_to superficial to Near the outer surface of the organism. Thus, skin is superficial to the muscle layer. BSPO:cjm RO:0002219 BSPO:0000109 spatial obsolete_surrounded_by obsolete_surrounded_by obsolete surrounded_by true Closer to the left side of the organism. Example: The dorsal fin is right of the left pectoral fin, but is left of the right eye. On the type level: X left of Y <=> every instance x of X is left of some instance y of Y, and there exists some organism o such that x part of o and y part of o. BSPO:0000110 spatial left_of left_of left of Closer to the left side of the organism. Example: The dorsal fin is right of the left pectoral fin, but is left of the right eye. On the type level: X left of Y <=> every instance x of X is left of some instance y of Y, and there exists some organism o such that x part of o and y part of o. BSPO:cjm Closer to the right side of the organism. Example: The dorsal fin is right of the left pectoral fin, but is left of the right eye. On the type level: X left of Y <=> every instance x of X is right of some instance y of Y, and there exists some organism o such that x part of o and y part of o. BSPO:0000111 spatial right_of right_of right of Closer to the right side of the organism. Example: The dorsal fin is right of the left pectoral fin, but is left of the right eye. On the type level: X left of Y <=> every instance x of X is right of some instance y of Y, and there exists some organism o such that x part of o and y part of o. BSPO:cjm Direcly opposite to. i.e. on the opposite side through the axis. BSPO:0000113 spatial opposite_to opposite_to opposite to Direcly opposite to. i.e. on the opposite side through the axis. BSPO:cjm X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion. BSPO:0000120 spatial in_left_side_of in_left_side_of in left side of https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion. BSPO:PATO_mtg_2009 X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion. BSPO:0000121 spatial in_right_side_of in_right_side_of in right side of https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion. BSPO:PATO_mtg_2009 X posterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the posterior portion. BSPO:0000122 spatial in_posterior_side_of in_posterior_side_of in posterior side of X posterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the posterior portion. BSPO:PATO_mtg_2009 X anterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the anterior portion. BSPO:0000123 spatial in_anterior_side_of in_anterior_side_of in anterior side of X anterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the anterior portion. BSPO:PATO_mtg_2009 x in proximal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the proximal portion. BSPO:0000124 spatial in_proximal_side_of in_proximal_side_of in proximal side of x in proximal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the proximal portion. BSPO:PATO_mtg_2009 x in distal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the distal portion. BSPO:0000125 spatial in_distal_side_of in_distal_side_of in distal side of x in distal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the distal portion. BSPO:PATO_mtg_2009 X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure BSPO:0000126 spatial in_lateral_side_of in_lateral_side_of in lateral side of https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure UBERON:cjm X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the superficial portion. BSPO:0001100 spatial in_superficial_part_of in_superficial_part_of in superficial part of X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the superficial portion. BSPO:cjm X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the deep portion. BSPO:0001101 spatial in_deep_part_of in_deep_part_of in deep part of X superficial part of Y <=> if Y is subdivided into two superficial and deep portions, X is part of the deep portion. BSPO:cjm X proximalmost part of Y <=> X is in proximal side of Y and X is adjacent to the proximal boundary of Y BSPO:0001106 spatial proximalmost_part_of proximalmost_part_of proximalmost part of X proximalmost part of Y <=> X is in proximal side of Y and X is adjacent to the proximal boundary of Y https://orcid.org/0000-0002-6601-2165 x immediately deep to y iff x deep_to y and x is contiguous with y. BSPO:0001107 spatial immediately_deep_to immediately_deep_to immediately deep to x immediately deep to y iff x deep_to y and x is contiguous with y. BSPO:curators X distalmost part of Y <=> X is in distal side of Y and X is adjacent to the distal boundary of Y BSPO:0001108 spatial distalmost_part_of distalmost_part_of distalmost part of X distalmost part of Y <=> X is in distal side of Y and X is adjacent to the distal boundary of Y https://orcid.org/0000-0002-6601-2165 BSPO:0001113 spatial preaxialmost_part_of preaxialmost_part_of preaxialmost part of x preaxial to y iff x is further along the preaxial-postaxial axis than y, towards the postaxial side. BSPO:0001114 spatial posterior to (developmentally) postaxial_to postaxial_to postaxial to x preaxial to y iff x is further along the preaxial-postaxial axis than y, towards the postaxial side. http://medical-dictionary.thefreedictionary.com/postaxial posterior to (developmentally) MA:th BSPO:0001115 spatial postaxialmost_part_of postaxialmost_part_of postaxialmost part of X intersects median plane of iff X crosses the midine plane of Y. BSPO:0005001 spatial intersects_midsagittal_plane_of intersects_midsagittal_plane_of intersects midsagittal plane of BSPO:0015001 spatial finishes_axis finishes_axis A directional axis can be divided by a plane. Following Allen Interval Algebra terminology we say that the side on which the axis initiates starts the axis, with the other side finishing the axis. If s finishes axis x, and x has end point p, then x overlaps p finishes axis BSPO:0015002 spatial follows_axis follows_axis follows axis BSPO:0015003 spatial has_axis has_axis has axis A relation between an axis and a part of an organism, in which the part defines the initial point of the axis. BSPO:0015004 spatial has_end_point has_end_point Axes can be defined in a given species by subtyping the relevant axis type and stating a end and end point has end point A relation between an axis and a part of an organism, in which the part defines the initial point of the axis. BSPO:cjm crossing at right angles BSPO:0015005 spatial orthogonal_to orthogonal_to orthogonal to crossing at right angles BSPO:cjm Intersects at two points. BSPO:0015006 spatial passes_through passes_through passes through Intersects at two points. BSPO:cjm BSPO:0015007 spatial starts_axis starts_axis A directional axis can be divided by a plane. Following Allen Interval Algebra terminology we say that the side on which the axis initiates starts the axis, with the other side finishing the axis. . If s starts axis x, and x has start point p, then x overlaps p starts axis BSPO:0015008 spatial surface_of surface_of placeholder. used for relation between anatomical surface and an anatomical side. surface of x immediately anterior to y iff x anterior to y and x is contiguous with y. BSPO:0015009 spatial immediately_anterior_to immediately_anterior_to immediately anterior to x immediately anterior to y iff x anterior to y and x is contiguous with y. BSPO:curators x immediately distal to y iff x distal to y and x is contiguous with y. BSPO:0015010 spatial immediately_distal_to immediately_distal_to immediately distal to x immediately distal to y iff x distal to y and x is contiguous with y. BSPO:curators x immediately dorsal to y iff x dorsal to y and x is contiguous with y. BSPO:0015011 spatial immediately_dorsal_to immediately_dorsal_to immediately dorsal to x immediately dorsal to y iff x dorsal to y and x is contiguous with y. BSPO:curators x immediately posterior to y iff x posterior_to y and x is contiguous with y. BSPO:0015012 spatial immediately_posterior_to immediately_posterior_to immediately posterior to x immediately posterior to y iff x posterior_to y and x is contiguous with y. BSPO:curators x immediately proximal to y iff x proximal to y and x is contiguous with y. BSPO:0015013 spatial immediately_proximal_to immediately_proximal_to immediately proximal to x immediately proximal to y iff x proximal to y and x is contiguous with y. BSPO:curators x immediately superficial to y iff x superficial to y and x is contiguous with y. BSPO:0015014 spatial immediately_superficial_to immediately_superficial_to immediately superficial to x immediately superficial to y iff x superficial to y and x is contiguous with y. BSPO:curators x immediately ventral to y iff x ventral to y and x is contiguous with y. BSPO:0015015 spatial immediately_ventral_to immediately_ventral_to immediately ventral to x immediately ventral to y iff x ventral to y and x is contiguous with y. BSPO:curators x immediately left of y iff x left_of y and x is contiguous with y. BSPO:0015016 spatial immediately_left_of immediately_left_of immediately left of x immediately left of y iff x left_of y and x is contiguous with y. BSPO:curators x immediately right of y iff x right of y and x is contiguous with y. BSPO:0015017 spatial immediately_right_of immediately_right_of immediately right of x immediately right of y iff x right of y and x is contiguous with y. BSPO:curators X dorsal side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the dorsal portion. BSPO:0015101 spatial in_dorsal_side_of in_dorsal_side_of in dorsal side of X dorsal side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the dorsal portion. BSPO:cjm X ventral side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the ventral portion. BSPO:0015102 spatial in_ventral_side_of in_ventral_side_of in ventral side of X ventral side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the ventral portion. BSPO:cjm nearer to the oral opening of the organism, on the oral-aboral axis. BSPO:0015201 spatial oral_to oral_to oral to nearer to the oral opening of the organism, on the oral-aboral axis. BSPO:cjm nearer to the aboral opening of the organism, on the oral-aboral axis. BSPO:0015202 spatial aboral_to aboral_to aboral to nearer to the aboral opening of the organism, on the oral-aboral axis. BSPO:cjm x preaxial to y iff x is further along the preaxial-postaxial axis than y, towards the front. BSPO:1000000 spatial anterior to (developmentally) lateral (radial) to medial (tibial) to preaxial_to preaxial_to preaxial to x preaxial to y iff x is further along the preaxial-postaxial axis than y, towards the front. http://medical-dictionary.thefreedictionary.com/preaxial anterior to (developmentally) MA:th x overlaps y iff they have some part in common. RO:0002131 spatial overlaps overlaps "(forall (x y) (iff (overlaps x y) (exists (z) (and (part of z x) (part of z y)))))" CLIF [] overlaps x overlaps y iff they have some part in common. BSPO:cjm RO:0002220 spatial adjacent_to adjacent_to adjacent to A relation between an axis and a part of an organism, in which the part defines the initial point of the axis. :has_start_point spatial has_start_point has_start_point Axes can be defined in a given species by subtyping the relevant axis type and stating a start and end point. has start point A relation between an axis and a part of an organism, in which the part defines the initial point of the axis. BSPO:cjm x is parallel t y iff x and y are lines or planes which when extended indefinitely do not cross. spatial parallel_to parallel to x is parallel t y iff x and y are lines or planes which when extended indefinitely do not cross. BSPO:curators The side of an organism that is left of the sagittal plane. left spatial BSPO:0000000 left side The side of an organism that is left of the sagittal plane. BSPO:cjm upper spatial BSPO:0000001 Consider merging with superior side. upper side lower spatial BSPO:0000002 Consider merging with inferior side. lower side BSPO:0000021 spatial BSPO:00000021 was made obsolete because the ID had too many digits deep-superficial gradient (obsolete) true deep spatial BSPO:0000003 deep side superficial spatial BSPO:0000004 superficial side A 2D surface of an anatomical continuant. FMA:24137 surface spatial BSPO:0000005 to be merged into CARO anatomical surface A 2D surface of an anatomical continuant. BSPO:cjm Fiat anatomical region extending a short distance from the boundary of an object inwards. edge margin spatial BSPO:0000006 anatomical margin Fiat anatomical region extending a short distance from the boundary of an object inwards. BSPO:cjm The side of an organism that is right of the sagittal plane. right spatial BSPO:0000007 right side The side of an organism that is right of the sagittal plane. BSPO:cjm BSPO:wd Sagittal plane that divides a bilateral body into unequal left and right parts. parasagittal section spatial BSPO:0000008 parasagittal plane Sagittal plane that divides a bilateral body into unequal left and right parts. BSPO:mah Sagittal plane that divides bilateral body into equal left and right parts. FMA:74563 median sagittal plane midline plane midsagittal section spatial median plane BSPO:0000009 only in bilaterally symmetrical organisms midsagittal plane Sagittal plane that divides bilateral body into equal left and right parts. BSPO:mah median sagittal plane FMA:74563 A straight line through space, intersecting an anatomical entity. http://upload.wikimedia.org/wikipedia/commons/3/34/Anatomical_Directions_and_Axes.JPG spatial BSPO:0000010 Axis directions are defined in terms of axes. anatomical axis A straight line through space, intersecting an anatomical entity. BSPO:cjm An anatomical axis determined by gravity. spatial superior-inferior axis BSPO:0000011 upper-lower axis An anatomical axis determined by gravity. BSPO:cjm An axis that extends from an internal position to a more external position in the body or body part. spatial BSPO:0000012 Muscles are frequently categorized as 'deep', 'intermediate', and 'superficial'. deep-superficial axis An axis that extends from an internal position to a more external position in the body or body part. BSPO:PM An axis that extends through an organism from head end to opposite end of body or tail. A-P axis AP axis anteroposterior axis cephalocaudal axis craniocaudal axis rostral/caudal rostrocaudal axis spatial longitudinal axis BSPO:0000013 In sponges, AP is used to indicate the direction of movement [in larval stage] (as it is in other metazoans that move, e.g., the basal bilaterians). [PM] anterior-posterior axis An axis that extends through an organism from head end to opposite end of body or tail. BSPO:cjm cephalocaudal axis http://en.wikipedia.org/wiki/Anatomical_terms_of_location craniocaudal axis rostral/caudal rostrocaudal axis An axis that extends through an organism or organism part from the part of the organism or organism part attached to a substrate (basal) to the furthest from the attachment (apical). Note that the apical-basal axis is often used for organismal parts where there is attachment via a basal lamina or other structure. apical/basal spatial longitudinal axis BSPO:0000014 apical-basal axis relative to substrate An axis that extends through an organism or organism part from the part of the organism or organism part attached to a substrate (basal) to the furthest from the attachment (apical). Note that the apical-basal axis is often used for organismal parts where there is attachment via a basal lamina or other structure. BSPO:mah An axis that extends from the point of attachment of a structure (proximal) to the point furthest away from the plane of attachment (distal). proximal/distal proximodistal spatial BSPO:0000015 In some communities, proximal and distal are used when specifying the position of parts of elements that are contained within the body, such as gill arches or vertebral spines. In these cases, use of the classes medial-lateral axis or medial-external axis are more appropriate. proximal-distal axis An axis that extends from the point of attachment of a structure (proximal) to the point furthest away from the plane of attachment (distal). BSPO:curators http://en.wikipedia.org/wiki/Anatomical_terms_of_location An axis that is approximately perpendicular to the anterior-posterior axis and that extends through the horizontal plane of the body. D-V axis DV axis dorsoventral axis anterior-posterior axis spatial BSPO:0000016 dorsal-ventral axis An axis that is approximately perpendicular to the anterior-posterior axis and that extends through the horizontal plane of the body. BSPO:curators anterior-posterior axis An axis that bisects an organism from left to right sides of body, through a sagittal plane. L-R axis LR axis R-L axis RL axis dextro-sinister axis left to right axis right to left axis right-left axis spatial BSPO:0000017 left-right axis An axis that bisects an organism from left to right sides of body, through a sagittal plane. BSPO:cjm Anatomical plane that divides body into anterior and posterior parts. FMA:12247 axial plane axial section transverse section spatial cross-section BSPO:0000018 transverse plane Anatomical plane that divides body into anterior and posterior parts. BSPO:mah Anatomical plane that divides bilateral body into dorsal and ventral parts. FMA:52810 frontal plane horizontal anatomical plane horizontal section spatial coronal section frontal section BSPO:0000019 horizontal plane Anatomical plane that divides bilateral body into dorsal and ventral parts. BSPO:mah horizontal anatomical plane FMA:52810 Anatomical gradient that is distributed along the upper-lower axis. spatial BSPO:0000020 upper-lower gradient Anatomical gradient that is distributed along the upper-lower axis. BSPO:wd Anatomical gradient that is distributed along the deep-superficial axis. spatial BSPO:0000021 deep-superficial gradient Anatomical gradient that is distributed along the deep-superficial axis. BSPO:wd The side that is higher relative to the substrate. superior spatial cranial BSPO:0000022 superior side The side that is higher relative to the substrate. BSPO:curators Anatomical gradient that is distributed along the apical-basal axis. spatial BSPO:0000023 apical-basal gradient Anatomical gradient that is distributed along the apical-basal axis. BSPO:wd Anatomical gradient that is distributed along the proximal-distal axis. spatial BSPO:0000024 proximal-distal gradient Anatomical gradient that is distributed along the proximal-distal axis. BSPO:wd The side that is lower relative to the substrate. inferior spatial caudal BSPO:0000025 inferior side The side that is lower relative to the substrate. BSPO:curators Anatomical region that overlaps the anterior and dorsal regions of a body or body part. Melissa Haendel 2009-06-15T01:01:38Z anterodorsal region spatial BSPO:0000026 antero-dorsal region Anatomical region that overlaps the anterior and dorsal regions of a body or body part. BSPO:wd Anatomical region that overlaps the anterior and ventral regions of a body or body part. Melissa Haendel 2009-06-15T01:04:59Z anteroventral region spatial BSPO:0000027 antero-ventral region Anatomical region that overlaps the anterior and ventral regions of a body or body part. BSPO:wd Anatomical region that overlaps the posterior and lateral regions of the body or body part. Melissa Haendel 2009-06-15T01:06:01Z posterolateral region spatial BSPO:0000028 postero-lateral region Anatomical region that overlaps the posterior and lateral regions of the body or body part. BSPO:wd Anatomical region that overlaps the anterior and lateral regions of a body or body part. Melissa Haendel 2009-06-15T01:07:18Z anterolateral region spatial BSPO:0000029 antero-lateral region Anatomical region that overlaps the anterior and lateral regions of a body or body part. BSPO:wd Anatomical region that overlaps the posterior and dorsal regions of the body or body part. Melissa Haendel 2009-06-15T01:08:13Z posterodorsal region spatial BSPO:0000030 postero-dorsal region Anatomical region that overlaps the posterior and dorsal regions of the body or body part. BSPO:wd spatial BSPO:0000031 upper region spatial BSPO:0000032 lower region Anatomical region located deep within an organism or structure. spatial BSPO:0000033 deep region Anatomical region located deep within an organism or structure. BSPO:wd Anatomical region superficially located on the body or body part. spatial BSPO:0000034 superficial region Anatomical region superficially located on the body or body part. BSPO:wd Anatomical region that overlaps the posterior and ventral regions of a body or body part. Melissa Haendel 2009-06-15T01:08:38Z posteroventral region spatial BSPO:0000035 postero-ventral region Anatomical region that overlaps the posterior and ventral regions of a body or body part. BSPO:wd Melissa Haendel 2009-06-16T08:49:03Z anterior-most anteriormost spatial BSPO:0000036 anterior-most region Melissa Haendel 2009-06-16T08:49:50Z posterior-most posteriormost spatial BSPO:0000037 posterior-most region Melissa Haendel 2009-06-16T08:50:26Z dorsal-most dorsalmost spatial BSPO:0000038 dorsal-most region Melissa Haendel 2009-06-16T08:51:07Z ventral-most ventralmost spatial BSPO:0000039 ventral-most region spatial BSPO:0000040 upper/lower compartment boundary spatial BSPO:0000041 deep/superficial compartment boundary Anatomical margin that is located on the antero-medial region of the body or body part. Melissa Haendel 2009-09-10T08:49:57Z anteromedial margin spatial BSPO:0000042 antero-medial margin Anatomical margin that is located on the antero-medial region of the body or body part. BSPO:wd spatial BSPO:0000043 apical/basal compartment boundary spatial BSPO:0000044 proximal/distal compartment boundary Anatomical margin that is located on the antero-lateral region of the body or body part. Melissa Haendel 2009-09-10T08:50:37Z anterolateral margin spatial BSPO:0000045 antero-lateral margin Anatomical margin that is located on the antero-lateral region of the body or body part. BSPO:wd Anatomical margin that is located on the postero-medial region of the body or body part. Melissa Haendel 2009-09-10T08:51:07Z posteromedial margin spatial BSPO:0000046 postero-medial margin Anatomical margin that is located on the postero-medial region of the body or body part. BSPO:wd Anatomical margin that is located on the postero-lateral region of the body or body part. Melissa Haendel 2009-09-10T08:51:42Z posterolateral margin spatial BSPO:0000047 postero-lateral margin Anatomical margin that is located on the postero-lateral region of the body or body part. BSPO:wd Anatomical margin that is located on the dorso-medial region of the body or body part. Melissa Haendel 2009-09-10T08:52:04Z dorso-medial margin spatial BSPO:0000048 dorso-medial margin Anatomical margin that is located on the dorso-medial region of the body or body part. BSPO:wd Anatomical margin that is located on the ventro-medial region of the body or body part. Melissa Haendel 2009-09-10T08:52:48Z ventromedial margin spatial BSPO:0000049 ventro-medial margin Anatomical margin that is located on the ventro-medial region of the body or body part. BSPO:wd Anatomical region that overlaps the anterior and medial regions of the body or body part. Melissa Haendel 2009-09-10T08:55:32Z anteromedial region spatial BSPO:0000050 antero-medial region Anatomical region that overlaps the anterior and medial regions of the body or body part. BSPO:wd Material anatomical entity defined by change in the value of some quantity per unit of distance across some spatial axis. FBql:00005254 spatial BSPO:0000051 anatomical gradient Material anatomical entity defined by change in the value of some quantity per unit of distance across some spatial axis. BSPO:cjm Anatomical gradient that is distributed along the anterior-posterior axis. FBcv:0000142 FBql:00005256 spatial BSPO:0000052 anterior-posterior gradient Anatomical gradient that is distributed along the anterior-posterior axis. BSPO:wd Anatomical gradient that is distributed along the dorsal-ventral axis. FBcv:0000143 FBql:00005255 spatial BSPO:0000053 dorsal-ventral gradient Anatomical gradient that is distributed along the dorsal-ventral axis. BSPO:wd An anatomical region bounded by a plane perpendicular to an axis through the middle. FBql:00005841 spatial BSPO:0000054 anatomical side An anatomical region bounded by a plane perpendicular to an axis through the middle. BSPO:cjm An anatomical region that is the entire part of an anatomical structure anterior to a transverse plane and bounded on one side by the same transverse plane. FBcv:0000053 FBql:00005848 anterior rostral spatial BSPO:0000055 anterior side An anatomical region that is the entire part of an anatomical structure anterior to a transverse plane and bounded on one side by the same transverse plane. BSPO:RW An anatomical region that is the entire part of an anatomical structure posterior to a transverse plane and bounded on one side by the same transverse plane. FBcv:0000065 FBql:00005849 posterior caudal spatial BSPO:0000056 posterior side An anatomical region that is the entire part of an anatomical structure posterior to a transverse plane and bounded on one side by the same transverse plane. BSPO:RW BSPO:wd caudal Anatomical side that is located on the apical end of an organism or structure. FBcv:0000054 FBql:00005854 apical spatial BSPO:0000057 apical side Anatomical side that is located on the apical end of an organism or structure. BSPO:wd Anatomical side that is located on the basal end of an organism or structure. FBcv:0000055 FBql:00005855 basal spatial BSPO:0000058 The part of the organism attached to a substrate. Axis of symmetry. basal side Anatomical side that is located on the basal end of an organism or structure. BSPO:wd Anatomical side that is centrally located on an organism or structure. FBcv:0000056 FBql:00015851 central spatial BSPO:0000059 central is not an axis direction central side Anatomical side that is centrally located on an organism or structure. BSPO:wd On the opposite side. FBcv:0000057 FBql:00005851 contralateral spatial BSPO:0000060 inherited from flybase cv. not clear how this would be used. Suggest we obsolete, and use the corresponding relation. contralateral side On the opposite side. BSPO:cjm FBcv:0000066 FBql:00005852 proximal spatial BSPO:0000061 proximal side Anatomical side that is distally located on an organism or structure. FBcv:0000058 FBql:00005853 distal spatial BSPO:0000062 distal side Anatomical side that is distally located on an organism or structure. BSPO:wd An anatomical region that is the entire part of an anatomical structure dorsal to a horizontal plane and bounded on one side by the same transverse plane. FBcv:0000059 FBql:00005842 dorsal spatial BSPO:0000063 dorsal side An anatomical region that is the entire part of an anatomical structure dorsal to a horizontal plane and bounded on one side by the same transverse plane. BSPO:wd Anatomical region that overlaps the posterior and medial regions of the body or body part. Melissa Haendel 2009-09-10T08:56:39Z posteromedial region spatial BSPO:0000064 postero-medial region Anatomical region that overlaps the posterior and medial regions of the body or body part. BSPO:wd On the same side FBcv:0000062 FBql:00005850 ipsilateral spatial BSPO:0000065 inherited from flybase cv. not clear how this would be used. Suggest we obsolete, and use the corresponding relation. ipsilateral side On the same side BSPO:cjm FBcv:0000063 FBql:00005844 lateral spatial BSPO:0000066 lateral side FBcv:0000064 FBql:00005847 medial spatial BSPO:0000067 a point in the centre of the organism (where the left-right axis intersects the midsagittal plane) medial side An anatomical region that is the entire part of an anatomical structure ventral to a horizontal plane and bounded on one side by the same horizontal plane. FBcv:0000070 FBql:00005843 ventral spatial BSPO:0000068 ventral side An anatomical region that is the entire part of an anatomical structure ventral to a horizontal plane and bounded on one side by the same horizontal plane. BSPO:RW BSPO:wd Anatomical region that overlaps the dorsal and medial regions of the body or body part. Melissa Haendel 2009-09-10T08:57:22Z dorsomedial region spatial BSPO:0000069 dorso-medial region Anatomical region that overlaps the dorsal and medial regions of the body or body part. BSPO:wd A 3D region in space without well-defined compartmental boundaries; for example, the dorsal region of an ectoderm. FBql:00005841 spatial BSPO:0000070 to be merged into CARO anatomical region A 3D region in space without well-defined compartmental boundaries; for example, the dorsal region of an ectoderm. BSPO:cjm Anatomical region anteriorly located on the body or body part. FBql:00005848 spatial BSPO:0000071 anterior region Anatomical region anteriorly located on the body or body part. BSPO:wd Anatomical region posteriorly located on the body or body part. FBql:00005849 spatial BSPO:0000072 posterior region Anatomical region posteriorly located on the body or body part. BSPO:wd Anatomical region located on the apical end on the body or body part. FBql:00005854 spatial BSPO:0000073 apical region Anatomical region located on the apical end on the body or body part. BSPO:wd Anatomical region located basally on the body or body part. FBql:00005855 spatial BSPO:0000074 basal region Anatomical region located basally on the body or body part. BSPO:wd Anatomical region centrally located on the body or body part. FBql:00015851 spatial BSPO:0000075 central region Anatomical region centrally located on the body or body part. BSPO:wd FBql:00005851 spatial BSPO:0000076 inherited from flybase cv. not clear how this would be used contralateral region Anatomical region proximally located on the body or body part. FBql:00005852 spatial BSPO:0000077 proximal region Anatomical region proximally located on the body or body part. BSPO:wd Anatomical region distally located on the body or body part. FBql:00005853 spatial BSPO:0000078 distal region Anatomical region distally located on the body or body part. BSPO:wd Anatomical region dorsally located on the body or body part. FBql:00005842 spatial BSPO:0000079 dorsal region Anatomical region dorsally located on the body or body part. BSPO:wd Anatomical region that overlaps the dorsal and lateral regions of a body or body part. FBql:00005845 dorsolateral region spatial BSPO:0000080 dorso-lateral region Anatomical region that overlaps the dorsal and lateral regions of a body or body part. BSPO:wd FBql:00005850 spatial BSPO:0000081 ipsilateral region Anatomical region laterally located on the body or body part. FBql:00005844 spatial BSPO:0000082 lateral region Anatomical region laterally located on the body or body part. BSPO:wd Anatomical region medially located on the body or body part. FBql:00005847 spatial BSPO:0000083 medial region Anatomical region medially located on the body or body part. BSPO:wd Anatomical region ventrally located on the body or body part. FBql:00005843 spatial BSPO:0000084 ventral region Anatomical region ventrally located on the body or body part. BSPO:wd Anatomical region that overlaps the ventral and lateral regions of a body or body part. FBql:00005846 ventrolateral region spatial BSPO:0000085 This is an example of a composition of two axis positions. ventro-lateral region Anatomical region that overlaps the ventral and lateral regions of a body or body part. BSPO:wd FBql:00005873 FMA:9647 spatial BSPO:0000086 to be merged into CARO anatomical compartment FBcv:0000031 FBql:00005874 spatial BSPO:0000087 anterior compartment FBcv:0000032 FBql:00005878 spatial BSPO:0000088 compartment boundary FBcv:0000035 FBql:00005876 spatial BSPO:0000089 dorsal compartment FBcv:0000036 FBql:00005875 spatial BSPO:0000090 posterior compartment FBcv:0000037 FBql:00005877 spatial BSPO:0000091 ventral compartment FBql:00005881 spatial BSPO:0000092 to be merged into CARO anatomical compartment boundary FBcv:0000033 FBql:00005880 spatial BSPO:0000093 anterior/posterior compartment boundary FBcv:0000034 FBql:00005879 spatial BSPO:0000094 dorsal/ventral compartment boundary The region corresponding to the ventral region of the entity, towards the midline. Melissa Haendel 2009-09-10T08:57:54Z medioventral region ventromedial region spatial BSPO:0000112 ventro-medial region The region corresponding to the ventral region of the entity, towards the midline. BSPO:wd Anatomical region peripherally located on the body or body part. spatial BSPO:0000127 peripheral region Anatomical region peripherally located on the body or body part. BSPO:wd spatial BSPO:0000128 axial region spatial BSPO:0000129 peripheral side spatial BSPO:0000130 axial side An anatomical axis that extends from the side of the anatomical entity that is closer to an axis (adaxial) to the side that is further from the same axis (abaxial). wasila.dahdul 2013-07-02T11:20:29Z AA axis spatial dorsal-ventral axis BSPO:0000195 adaxial-abaxial axis An anatomical axis that extends from the side of the anatomical entity that is closer to an axis (adaxial) to the side that is further from the same axis (abaxial). BSPO:RW An anatomical axis that extends from the center of the body outwards or externally. wasila.dahdul 2013-07-02T11:21:42Z spatial proximal-distal axis BSPO:0000196 The medial-external axis could apply to a sphere-shaped body. medial-external axis An anatomical axis that extends from the center of the body outwards or externally. BSPO:curators An anatomical axis that is perpendicular to an apical/basal axis or proximal/distal axis and extends from the center of an axis (shoot axis or root in the case of plants) to any point on the exterior of the axis. wasila.dahdul 2013-07-02T11:23:31Z M-R axis MR axis spatial BSPO:0000197 In plants, lateral growth (http://purl.obolibrary.org/obo/GO_0080190) run is along the medial/radial axis (from medial to radial) [RW]. Also applies to radially symmetrical animals such as sea urchins, cnidarians [PM] or applies to more-or-less cylindrical body parts in animals, like limbs. medial-radial axis An anatomical axis that is perpendicular to an apical/basal axis or proximal/distal axis and extends from the center of an axis (shoot axis or root in the case of plants) to any point on the exterior of the axis. BSPO:curators An axis that extends from the oral opening to the furthest point in an organism that is directly opposite. wasila.dahdul 2013-07-02T11:29:33Z spatial BSPO:0000198 oral-aboral axis An axis that extends from the oral opening to the furthest point in an organism that is directly opposite. BSPO:PM An axis that extends from the animal end of an egg or early embryo to the opposite, vegetal end. In animals with yolk-bearing eggs, the vegetal end is the yolk bearing pole. (pertains to animals only - both vertebrate and invertebrate embryos). wasila.dahdul 2013-07-02T11:30:13Z A-V axis AV axis animal/vegetal axis spatial BSPO:0000199 animal-vegetal axis An axis that extends from the animal end of an egg or early embryo to the opposite, vegetal end. In animals with yolk-bearing eggs, the vegetal end is the yolk bearing pole. (pertains to animals only - both vertebrate and invertebrate embryos). BSPO:PM An axis of a plant structure that is determined by the direction of apical growth, either by an apical meristem or an apical cell. Apical is toward the direction of apical growth: toward the tip of a growing shoot axis, root, thallus, or non-vascular leaf. Basal is away from the direction of apical growth: toward the root-shoot junction in the case of the primary root or stem, toward the primary root or stem for higher order roots or branches, toward the point of attachment for non-vascular leaves, and toward the original point of growth (as determined in the embryo) for thalli. spatial BSPO:0000200 Plant structures that do not grow from an apical meristem, such as vascular leaves or petals, should be described using the proximal-distal axis. The proximal-distal axis may also be used for branches or lateral roots, and, in those cases, is concordant with the apical-basal axis. apical-basal axis relative to direction of growth An axis of a plant structure that is determined by the direction of apical growth, either by an apical meristem or an apical cell. Apical is toward the direction of apical growth: toward the tip of a growing shoot axis, root, thallus, or non-vascular leaf. Basal is away from the direction of apical growth: toward the root-shoot junction in the case of the primary root or stem, toward the primary root or stem for higher order roots or branches, toward the point of attachment for non-vascular leaves, and toward the original point of growth (as determined in the embryo) for thalli. BSPO:RW Anatomical plane that is perpendicular to a radial plane. wasila.dahdul 2014-01-22T15:34:31Z spatial BSPO:0000201 Need to add logical definitions. tangential plane Anatomical plane that is perpendicular to a radial plane. BSPO:wd Anatomical plane that follows the two dimensions specified by an apical-basal axis relative to direction of growth and a medial-lateral axis. wasila.dahdul 2014-01-22T15:34:02Z spatial BSPO:0000202 Need to add logical definitions. radial plane Anatomical plane that follows the two dimensions specified by an apical-basal axis relative to direction of growth and a medial-lateral axis. BSPO:wd Anatomical surface that is located on the anterior side of the body or body part. FBql:00005848 spatial BSPO:0000371 anterior surface Anatomical surface that is located on the anterior side of the body or body part. BSPO:wd Anatomical surface that is located on the posterior side of the body or body part. FBql:00005849 spatial BSPO:0000372 posterior surface Anatomical surface that is located on the posterior side of the body or body part. BSPO:wd Anatomical surface that is located on the apical side of the body or body part. FBql:00005854 spatial BSPO:0000373 apical surface Anatomical surface that is located on the apical side of the body or body part. BSPO:wd Anatomical surface that is located on the basal side of the body or body part. FBql:00005855 spatial BSPO:0000374 basal surface Anatomical surface that is located on the basal side of the body or body part. BSPO:wd FBql:00005851 spatial BSPO:0000376 contralateral surface Anatomical surface that is located on the proximal side of the body or body part. FBql:00005852 spatial BSPO:0000377 proximal surface Anatomical surface that is located on the proximal side of the body or body part. BSPO:wd Anatomical surface that is located on the distal side of the body or body part. FBql:00005853 spatial BSPO:0000378 distal surface Anatomical surface that is located on the distal side of the body or body part. BSPO:wd Anatomical surface that located on the dorsal side of the body or body part. FBql:00005842 spatial BSPO:0000379 dorsal surface Anatomical surface that located on the dorsal side of the body or body part. BSPO:wd Anatomical surface that is located on the same side of an organism or structure. FBql:00005850 spatial BSPO:0000381 ipsilateral surface Anatomical surface that is located on the same side of an organism or structure. BSPO:wd Anatomical surface that located on the lateral side of the body or body part. FBql:00005844 spatial BSPO:0000382 lateral surface Anatomical surface that located on the lateral side of the body or body part. BSPO:wd Anatomical surface that located on the medial side of the body or body part. FBql:00005847 spatial BSPO:0000383 medial surface Anatomical surface that located on the medial side of the body or body part. BSPO:wd Anatomical surface that is located on the ventral side of the body or body part. FBql:00005843 spatial BSPO:0000384 ventral surface Anatomical surface that is located on the ventral side of the body or body part. BSPO:wd A flat 2D plane intersecting an anatomical continuant, dividing it into two adjacent portions. FMA:242982 anatomical cross-section anatomical section plane section spatial cross-section BSPO:0000400 These anatomical sections are applicable to most bilaterally symmetrical animals, but bipedal animals such as humans have more complex usage of these terms. For example, in post-embryonic humans a coronal plane is vertical and a transverse plane is horizontal, but for embryos and quadrupeds a coronal plane is horizontal and a transverse plane is vertical. anatomical plane A flat 2D plane intersecting an anatomical continuant, dividing it into two adjacent portions. BSPO:cjm Anatomical plane that divides a bilateral body into left and right parts, not necessarily of even size. FMA:11361 left/right plane median plane sagittal section spatial BSPO:0000417 sagittal plane Anatomical plane that divides a bilateral body into left and right parts, not necessarily of even size. BSPO:DOS BSPO:cjm BSPO:mah Anatomical margin that is located on the anterior side of a body or body part. spatial BSPO:0000671 anterior margin Anatomical margin that is located on the anterior side of a body or body part. BSPO:wd Anatomical margin that is located on the posterior side of the body or body part. spatial BSPO:0000672 posterior margin Anatomical margin that is located on the posterior side of the body or body part. BSPO:wd Anatomical margin that is located on the apical side of the body or body part. spatial BSPO:0000673 apical margin Anatomical margin that is located on the apical side of the body or body part. BSPO:wd Anatomical margin that is located on the basal side of the body or body part. spatial BSPO:0000674 basal margin Anatomical margin that is located on the basal side of the body or body part. BSPO:wd Anatomical margin that is located on the proximal region of the body or body part. spatial BSPO:0000677 proximal margin Anatomical margin that is located on the proximal region of the body or body part. BSPO:wd Anatomical margin that is located on the distal side of the body or body part. spatial BSPO:0000678 distal margin Anatomical margin that is located on the distal side of the body or body part. BSPO:wd Anatomical margin that is located on the dorsal side of body or body part. spatial BSPO:0000679 dorsal margin Anatomical margin that is located on the dorsal side of body or body part. BSPO:wd Anatomical margin that is located on the dorso-lateral region of the body or body part. dorsolateral margin spatial BSPO:0000680 dorso-lateral margin Anatomical margin that is located on the dorso-lateral region of the body or body part. BSPO:wd Anatomical margin that is located on the lateral side of the body or body part. spatial BSPO:0000682 lateral margin Anatomical margin that is located on the lateral side of the body or body part. BSPO:wd Anatomical margin that is located on the medial side of the body or body part. spatial BSPO:0000683 medial margin Anatomical margin that is located on the medial side of the body or body part. BSPO:wd Anatomical margin that is located on the ventral side of the body or body part. spatial BSPO:0000684 ventral margin Anatomical margin that is located on the ventral side of the body or body part. BSPO:wd Anatomical margin that is located on the ventro-lateral region of the body or body part. ventrolateral margin spatial BSPO:0000685 This is an example of a composition of two axis positions ventro-lateral margin Anatomical margin that is located on the ventro-lateral region of the body or body part. BSPO:wd Anatomical margin that is located on the antero-dorso region of the body or body part. anterodorsal margin spatial BSPO:0000686 antero-dorsal margin Anatomical margin that is located on the antero-dorso region of the body or body part. BSPO:wd Anatomical margin that is located on the postero-dorsal region of the body or body part. posterodorsal margin spatial BSPO:0000687 postero-dorsal margin Anatomical margin that is located on the postero-dorsal region of the body or body part. BSPO:wd Anatomical margin that is located on the antero-ventral region of the body or body part. anteroventral margin spatial BSPO:0000688 antero-ventral margin Anatomical margin that is located on the antero-ventral region of the body or body part. BSPO:wd Anatomical margin that is located on the postero-ventral region of the body or body part. posteroventral margin spatial BSPO:0000689 postero-ventral margin Anatomical margin that is located on the postero-ventral region of the body or body part. BSPO:wd An axis that extends from the center of organism to one or other side. http://upload.wikimedia.org/wikipedia/commons/3/34/Anatomical_Directions_and_Axes.JPG M-L axis ML axis medio-lateral axis mediolateral axis spatial proximal-distal axis BSPO:0001001 Properly, the ML axis is a half axis; practically, its usage is less clumsy and less linguistically biased than "left-right". The terms may still be used relatively to describe locations along the LR axis. The gills are medial to the operculum, but lateral to the heart. medial-lateral axis An axis that extends from the center of organism to one or other side. BSPO:cjm Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. spatial CARO:0000000 anatomical entity Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. CARO:MAH Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome. spatial CARO:0000003 anatomical structure Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome. CC:DOS An anatomical entity that has mass. spatial CARO:0000006 material anatomical entity An anatomical entity that has mass. CC:DOS An anatomical entity that has no mass. spatial CARO:0000007 immaterial anatomical entity An anatomical entity that has no mass. CC:DOS A one dimensional, immaterial anatomical entity. spatial CARO:0000008 anatomical line A one dimensional, immaterial anatomical entity. CC:DOS A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures. spatial CARO:0000010 anatomical boundary A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures. CC:DOS