# Permanent URL of this document: # http://purl.obolibrary.org/obo/eco/gaf-eco-mapping.txt # # Always use this URL # # About: # This mapping translates evidence codes used in a GAF to a specific evidence type in ECO # # Each mapping is from a pair: # 1. GAF evidence code (e.g. IEA) # 2. A GO_REF (found in the GAF Reference column; see http://www.geneontology.org/cgi-bin/references.cgi) # to a class identifier in ECO (http://purl.obolibrary.org/obo/eco.owl) # 3. ECO ID # # If the value 'Default' is in column 2 then this mapping is used if # no more specific mapping can be found # # This document consists of these comments (after #s) followed by # a set of mappings, each represented as the above 3 columns separated by tabs # # For example an IEA supported by # http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 # maps to ECO:0000256 'match to sequence model evidence used in automatic assertion' # # To request changes in the mappings, submit an item to # https://github.com/evidenceontology/evidenceontology/issues # EXP Default ECO:0000269 HDA Default ECO:0007005 HEP Default ECO:0007007 HGI Default ECO:0007003 HMP Default ECO:0007001 HTP Default ECO:0006056 IBA Default ECO:0000318 IBD Default ECO:0000319 IC Default ECO:0000305 IDA Default ECO:0000314 IEA Default ECO:0000501 IEA GO_REF:0000002 ECO:0000256 IEA GO_REF:0000003 ECO:0000501 IEA GO_REF:0000004 ECO:0007322 IEA GO_REF:0000023 ECO:0007322 IEA GO_REF:0000020 ECO:0000501 IEA GO_REF:0000035 ECO:0000265 IEA GO_REF:0000041 ECO:0000501 IEA GO_REF:0000043 ECO:0000501 IEA GO_REF:0000116 ECO:0000501 IEA GO_REF:0000044 ECO:0000501 IEA GO_REF:0000107 ECO:0000249 IEA GO_REF:0000108 ECO:0000363 IEP Default ECO:0000270 IGC Default ECO:0000317 IGC GO_REF:0000025 ECO:0000354 IGI Default ECO:0000316 IKR Default ECO:0000320 IMP Default ECO:0000315 IPI Default ECO:0000353 IRD Default ECO:0000321 ISA Default ECO:0000247 ISM Default ECO:0000255 ISO Default ECO:0000266 ISS Default ECO:0000250 ISS GO_REF:0000011 ECO:0000255 ISS GO_REF:0000012 ECO:0000031 ISS GO_REF:0000027 ECO:0000031 NAS Default ECO:0000303 ND Default ECO:0000307 RCA Default ECO:0000245 TAS Default ECO:0000304