A data specification established for use by The Canadian COVID-19 Genomics Network (CanCOGeN) project for SARS-CoV-2 contextual data (metadata) harmonization and curation across data providers. https://orcid.org/0000-0002-9578-0788 2021-04-24T00:18:57Z The Canadian COVID-19 Genomics Network SARS-CoV-2 specification The Canadian COVID-19 Genomics Network severe acute respiratory syndrome coronavirus 2 specification The Canadian coronavirus 2019 Genomics Network severe acute respiratory syndrome coronavirus 2 specification CanCOGeN SARS-CoV-2 CanCOGeN SARS-CoV-2 specification https://github.com/cidgoh/pathogen-genomics-package A data specification established for use by The Public Health Alliance for Genomic Epidemiology (PHA4GE) project for SARS-CoV-2 contextual data (metadata) harmonization and curation across data providers. PHA4GE SARS-CoV-2 contextual data specification https://orcid.org/0000-0002-9578-0788 2022-12-09T20:18:38.910Z Public Health Alliance for Genomic Epidemiology SARS-CoV-2 specification Public Health Alliance for Genomic Epidemiology severe acute respiratory syndrome coronavirus 2 specification PHA4GE SARS-CoV-2 PHA4GE SARS-CoV-2 specification Manuscript: https://doi.org/10.1093/gigascience/giac003 GitHub: https://github.com/pha4ge/SARS-CoV-2-Contextual-Data-Specification A data specification established for pathogen genomics contextual data (metadata) harmonization and curation across Canadian data providers. https://orcid.org/0000-0002-9578-0788 2022-12-09T20:18:38.910Z Canadian pathogen genomics specification https://github.com/cidgoh/pathogen-genomics-package A data specification established for use by The Canadian Genomics Research & Development Initiative (GRDI) Antimicrobial Resistance (AMR) project for contextual data (metadata) harmonization and curation across data providers. https://orcid.org/0000-0002-9578-0788 2022-12-09T20:18:38.910Z Genomics Research & Development Initiative Antimicrobial Resistance One Health specification GRDI GRDI AMR One Health specification https://github.com/cidgoh/GRDI_AMR_One_Health A data specification established for Monkeypox pathogen genomics contextual data (metadata) harmonization and curation across Canadian data providers. https://orcid.org/0000-0002-9578-0788 2022-12-09T20:18:38.910Z Monkeypox Canadian Monkeypox specification https://github.com/cidgoh/pathogen-genomics-package A data specification established for Monkeypox pathogen genomics contextual data (metadata) harmonization and curation across international data providers. https://orcid.org/0000-0002-9578-0788 2022-12-09T20:18:38.910Z Monkeypox-International International Monkeypox specification https://github.com/cidgoh/pathogen-genomics-package A data specification established by the Public Health Alliance for Genomic Epidemiology (PHA4GE) for genomics contextual data (metadata) harmonization and curation. https://orcid.org/0000-0002-9578-0788 2023-01-22T23:12:40.795Z Public Health Alliance for Genomic Epidemiology specification PHA4GE genomics specification GitHub: https://github.com/pha4ge A data specification established by the Public Health Alliance for Genomic Epidemiology (PHA4GE) for genomics contextual data (metadata) harmonization and curation. PHA4GE QC contextual data tags specification PHA4GE QC tags specification PHA4GE quality control contextual data tags specification https://orcid.org/0000-0002-1107-9135 https://orcid.org/0000-0002-9578-0788 2023-01-22T23:12:40.795Z PHA4GE QC specification Public Health Alliance for Genomic Epidemiology quality control specification PHA4GE QC Tag PHA4GE quality control specification GitHub: https://github.com/pha4ge/contextual_data_QC_tags