format-version: 1.2 data-version: 2022-03-15 ontology: ontoavida property_value: http://purl.org/dc/elements/1.1/description "The Ontology for Avida (OntoAvida) project aims to develop an integrated vocabulary for the description of the most widely used computational approach for performing experimental evolution using digital organisms (i.e., self-replicating computer programs that evolve within a user-defined computational environment).\n\nThe lack of a clearly defined vocabulary makes biologists feel reluctant to embrace the field of digital evolution. This unique ontology has the potential to change this picture overnight.\n\nOntoAvida was initially developed by https://fortunalab.org, the computational biology lab at the Doñana Biological Station (a research institute of the Spanish National Research Council based at Seville, Spain). Contributors to OntoAvida are expected to include members of the Digital Evolution Laboratory (https://devolab.org/) at Michigan State University (USA).\n\nMore information can be found at https://obofoundry.org/ontology/ontoavida.html" xsd:string property_value: http://purl.org/dc/elements/1.1/title "OntoAvida: ontology for Avida digital evolution platform." xsd:string property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/4.0/ owl-axioms: Prefix(owl:=)\nPrefix(rdf:=)\nPrefix(xml:=)\nPrefix(xsd:=)\nPrefix(rdfs:=)\n\n\nOntology(\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(Class())\nDeclaration(ObjectProperty())\nDeclaration(ObjectProperty())\nDeclaration(ObjectProperty())\nDeclaration(ObjectProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\nDeclaration(DataProperty())\n\n############################\n# Data Properties\n############################\n\n# Data Property: (gestation time)\n\nSubDataPropertyOf( owl:topDataProperty)\nDataPropertyDomain( )\nDataPropertyRange( xsd:integer)\n\n# Data Property: (doi)\n\nSubDataPropertyOf( owl:topDataProperty)\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:string)\n\n# Data Property: (virtual CPU)\n\nSubDataPropertyOf( owl:topDataProperty)\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( DataOneOf(\"default\" \"transsmt\"))\n\n# Data Property: (tandem repeat instruction sequence)\n\nSubDataPropertyOf( )\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:string)\n\n# Data Property: (genome instruction sequence)\n\nSubDataPropertyOf( )\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:string)\n\n# Data Property: (transcriptome instruction sequence)\n\nSubDataPropertyOf( )\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:string)\n\n# Data Property: (tandem repeat length)\n\nSubDataPropertyOf( owl:topDataProperty)\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:integer)\n\n# Data Property: (position at genome)\n\nSubDataPropertyOf( owl:topDataProperty)\n\n# Data Property: (transcriptome position at genome)\n\nSubDataPropertyOf( )\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:string)\n\n# Data Property: (tandem repeat position at genome)\n\nSubDataPropertyOf( )\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:string)\n\n# Data Property: (genome length)\n\nSubDataPropertyOf( owl:topDataProperty)\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:integer)\n\n# Data Property: (transcriptome length)\n\nSubDataPropertyOf( owl:topDataProperty)\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:integer)\n\n# Data Property: (viable)\n\nSubDataPropertyOf( owl:topDataProperty)\nDataPropertyDomain( )\nDataPropertyRange( xsd:boolean)\n\n# Data Property: (genome length executed)\n\nSubDataPropertyOf( owl:topDataProperty)\nDataPropertyDomain( )\nDataPropertyRange( xsd:integer)\n\n# Data Property: (number of tandem repetitions)\n\nSubDataPropertyOf( owl:topDataProperty)\nFunctionalDataProperty()\nDataPropertyDomain( )\nDataPropertyRange( xsd:integer)\n\n\n\n############################\n# Classes\n############################\n\n# Class: (paper)\n\nSubClassOf( owl:Thing)\n\n# Class: (digital organism)\n\nSubClassOf( owl:Thing)\n\n# Class: (experiment)\n\nSubClassOf( owl:Thing)\n\n# Class: (configuration file)\n\n\n# Class: (executable file)\n\n\n# Class: (instruction set file)\n\n\n# Class: (logic environment)\n\nSubClassOf( owl:Thing)\n\n# Class: (avida configuration file)\n\n\n# Class: (events configuration file)\n\n\n# Class: (environment configuration file)\n\n\n# Class: (configuration command)\n\nSubClassOf( owl:Thing)\n\n# Class: (analyze configuration file)\n\n\n# Class: (instruction code)\n\nSubClassOf( owl:Thing)\n\n# Class: (digital organism file)\n\n\n# Class: (instset-transsmt.cfg)\n\n\n# Class: (instset-heads-sex.cfg)\n\n\n# Class: (instset-heads.cfg)\n\n\n# Class: (digital genome)\n\nSubClassOf( owl:Thing)\n\n# Class: (CPU cycle)\n\nSubClassOf( owl:Thing)\n\n# Class: (head)\n\nSubClassOf( owl:Thing)\n\n# Class: (logic operation)\n\nSubClassOf( owl:Thing)\n\n# Class: (and)\n\n\n# Class: (and-not)\n\n\n# Class: (equals)\n\n\n# Class: (not-and)\n\n\n# Class: (not-or)\n\n\n# Class: (not)\n\n\n# Class: (or)\n\n\n# Class: (orn-not)\n\n\n# Class: (exclusive or)\n\n\n# Class: (digital transcriptome)\n\nSubClassOf( owl:Thing)\n\n# Class: (update)\n\nSubClassOf( owl:Thing)\n\n# Class: (digital storage space)\n\nSubClassOf( owl:Thing)\n\n# Class: (instruction set)\n\nSubClassOf( owl:Thing)\n\n# Class: (heads_default)\n\n\n# Class: (heads_sex)\n\n\n# Class: (transsmt)\n\n\n# Class: (digital tandem repeat)\n\nSubClassOf( owl:Thing)\n\n# Class: (template)\n\nSubClassOf( owl:Thing)\n\n# Class: (nop notation)\n\nSubClassOf( owl:Thing)\n\n# Class: (hardware type)\n\nSubClassOf( owl:Thing)\n\n# Class: (digital phenotype)\n\nSubClassOf( owl:Thing)\n\n# Class: (execution thread)\n\nSubClassOf( owl:Thing)\n\n# Class: (world grid)\n\nSubClassOf( owl:Thing)\n\n# Class: (world grid cell)\n\nSubClassOf( owl:Thing)\n\n# Class: (complementary template)\n\nSubClassOf( owl:Thing)\n\n# Class: (digital file)\n\nSubClassOf( owl:Thing)\n\n\nDisjointClasses( )\nDisjointClasses( )\nDisjointClasses( )\nDisjointClasses( )\nDisjointClasses( )\nSubObjectPropertyOf(ObjectPropertyChain( ) )\n) [Term] id: FBcv:0000212 name: paper namespace: pub_type def: "An article reporting original research, published in a peer-reviewed journal." [FBC:SM] comment: Note that this is a much more specific class than that referred to by MeSH Journal article (D016428). synonym: "Journal article" BROAD [MeSH:D016428] xref: MeSH:D016428 [Term] id: GSSO:009994 name: digital organism def: "A digital organism is a self-replicating computer program that mutates and evolve within a user-defined computational environment." [] disjoint_from: ONTOAVIDA:00000097 ! digital genome disjoint_from: ONTOAVIDA:00000124 ! digital transcriptome disjoint_from: ONTOAVIDA:00000135 ! digital tandem repeat disjoint_from: ONTOAVIDA:00000151 ! digital phenotype [Term] id: NCIT:C42790 name: experiment def: "An experiment is a scientific procedure undertaken to make a discovery, test a hypothesis, or demonstrate a known fact." [] [Term] id: ONTOAVIDA:00000001 name: configuration file def: "A configuration file is a digital file that stores settings that are specific to a particular software." [] is_a: STATO:0000002 ! digital file disjoint_from: ONTOAVIDA:00000002 ! executable file [Term] id: ONTOAVIDA:00000002 name: executable file def: "An executable file is a digital file that executes a process." [] is_a: STATO:0000002 ! digital file [Term] id: ONTOAVIDA:00000003 name: instruction set file def: "An instruction set file is a digital file containing the instruction set that defines the genetic language of a digital organism in Avida (i.e., the instruction codes that a digital organism can hold in its genome). The name of the instruction set may not be the same as the name of the file containing the instruction set (i.e., one file may contain multiple instruction sets)." [] is_a: STATO:0000002 ! digital file [Term] id: ONTOAVIDA:00000007 name: logic environment def: "A computational environment that defines the logic operations that are listed in the environment configuration file." [] [Term] id: ONTOAVIDA:00000008 name: avida configuration file def: "An avida configuration file is a configuracion file that set up all the basic conditions for performing an experiment in Avida." [] is_a: ONTOAVIDA:00000001 ! configuration file disjoint_from: ONTOAVIDA:00000009 ! events configuration file [Term] id: ONTOAVIDA:00000009 name: events configuration file def: "An events configuration file is a configuration file that controls the events that need to occur throughout the course of an experiment in Avida.\n\nThis file consists of a list of events that will be triggered either singly or periodically. The format for each line is: 'type' 'timing' 'event' 'arguments'. The type determines what kind of timings the event will be based off of (i.e., immediate [i], based on update [u], or based on generation [g]). The timing should only be included for non-immediate events. If a single number is given for timing, the event occurs at that update/generation. A second number can be included (separated by a colon ':') to indicate how often the event should be repeated. And if a third number is listed (again, colon seperated) this will be the last time the event can occur on. The event is simply the name of the action that should be performed, and the arguments detail exactly how it should work when it is triggered." [] is_a: ONTOAVIDA:00000001 ! configuration file [Term] id: ONTOAVIDA:00000010 name: environment configuration file def: "An environment configuration file is a configuration file that set up the way a digital organism interacts with its computational environment in Avida." [] is_a: ONTOAVIDA:00000001 ! configuration file [Term] id: ONTOAVIDA:00000011 name: configuration command def: "A configuration command is a directive included in a configuration file that make up a configuration file in Avida." [] [Term] id: ONTOAVIDA:00000012 name: analyze configuration file def: "An analyze configuration file is a configuration file that involves loading the genomes of digital organisms in one or more batches to perform additional tests after an evolutionary experiment in Avida has been completed." [] is_a: ONTOAVIDA:00000001 ! configuration file [Term] id: ONTOAVIDA:00000013 name: analyze mode def: "The analyze mode is an execution mode of Avida consisting of performing an experiment where the genome of a single digital organism is executed in a test virtual CPU to compute its properties." [] is_a: ONTOAVIDA:00000096 ! avida experiment relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000002 {cardinality="1"} ! involves executable file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000003 {cardinality="1"} ! involves instruction set file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000008 {cardinality="1"} ! involves avida configuration file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000009 {cardinality="1"} ! involves events configuration file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000010 {cardinality="1"} ! involves environment configuration file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000012 {cardinality="1"} ! involves analyze configuration file [Term] id: ONTOAVIDA:00000014 name: standard mode def: "The standard mode is an execution mode of Avida consisting of performing an experiment where populations of digital organisms evolve in a open ended computational environment (i.e., standard or transsmt virtual CPU)." [] is_a: ONTOAVIDA:00000096 ! avida experiment relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000002 {cardinality="1"} ! involves executable file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000003 {cardinality="1"} ! involves instruction set file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000008 {cardinality="1"} ! involves avida configuration file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000009 {cardinality="1"} ! involves events configuration file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000010 {cardinality="1"} ! involves environment configuration file relationship: ONTOAVIDA:00001200 ONTOAVIDA:00000012 {cardinality="0"} ! involves analyze configuration file [Term] id: ONTOAVIDA:00000017 name: host digital organism def: "A host digital organism is a digital organism whose CPU-cycles can be stolen by another digital organism." [] is_a: GSSO:009994 ! digital organism disjoint_from: ONTOAVIDA:00000018 ! parasite digital organism [Term] id: ONTOAVIDA:00000018 name: parasite digital organism def: "A parasite digital organism is a digital organism capable of stealing CPU-cycles from another digital organism." [] is_a: GSSO:009994 ! digital organism [Term] id: ONTOAVIDA:00000022 name: instruction code def: "An instruction code is a group of bits that instruct the computer to perform a specific operation. Each intruction code may be followed by a series of options that define how that instruction code should be used. In Avida, each position of a digital organism genome consists of an instruction code." [] [Term] id: ONTOAVIDA:00000023 name: add def: "The instruction code 'add' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the BX and CX registers and sums them together. The result of this operation is then placed in the ?BX? register. This instruction code can be modified by one 'nop' instruction code, which specify which register is used to place the result of this operation." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000024 name: dec def: "The instruction code 'dec' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the ?BX? register and decrements it by one. This instruction code is destructive (I.e., it pops the old value off the register), and can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000025 name: Divide-Erase def: "The instruction code 'Divide-Erase' is an instruction code of the transsmt instruction set that attempts to divide off a finished offspring copy. It uses whatever memory space the write-head is currently pointing to as the offspring's genome. If this instruction code fails, the memory space is cleared and the organism's heads are reset. Note that this instruction code is equivalent to the instruction code 'h-divide' of the heads_default instruction set." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000026 name: divide-sex def: "The instruction code 'divide-sex' is an instruction code of the head_sex instruction set that attempts to divide off a finished offspring copy. But, instead of placing it in the population immediately, its offspring is stored until the offspring of another digital organism is produced, at which time they recombine their genomes and the two recombinant products are placed into the population." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000027 name: get-head def: "The instruction code 'get-head' is an instruction code of the heads_default and heads_sex instruction sets that copy the position of the instruction pointer ?IP? into the CX register. This instruction code can be modified by one 'nop' instruction, which specifies which head its position will be copied." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000028 name: h-alloc def: "The instruction code 'h-allow' is an instruction code of the heads_default and heads_sex instruction sets that allocates additional memory for the digital organism up to the maximum it is allowed to use for its offspring." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000029 name: h-copy def: "The instruction code 'h-copy' is an instruction code of the heads_default and heads_sex instruction sets that reads the contents of the digital organism's memory at the position of the read-head and copy that to the position of the write-head. If a non-zero copy mutation rate is set, a test will be made based on this probability to determine if a mutation occurs. If so, a random instruction code (chosen from the full instruction set with equal probability) will be placed at the write-head instead." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000030 name: h-divide def: "The instruction code 'h-divide' is an instruction code of the heads_default instruction set that attempts to divide off a finished offspring copy. The original digital organism keeps the state of its memory up until the read-head. The offspring's memory is initialized to everything between the read-head and the write-head. All digital organism's memory past the write-head is removed entirely." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000031 name: h-search def: "The instruction code 'h-search' is an instruction code of the heads_default and heads_sex instruction sets that will read in the template that follows it, and find the location of a complement template in the code. The BX register will be set to the distance to the complement from the current position of the instruction pointer, and the CX register will be set to the size of the template. The flow-head will also be placed at the beginning of the complement template. If no template follows, both BX and CX will be set to zero, and the flow-head will be placed on the instruction immediatly following the 'h-search' instruction code." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000032 name: Head-Move def: "The instruction code 'Head-Move' is an instruction code of the transsmt instruction set that will cause the instruction pointer ?IP? to jump to the position in memory of the flow-head. This instruction code can be modified by one 'Nop' instruction code, which specify which head to move to the position pointed to by the flow-head. Note that this instruction code is equivalent to the 'mov-head' instruction code of the heads_default instruction set." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000033 name: Head-Pop def: "The instruction code 'Head-Pop' is an instruction code of the transsmt instruction set that pops a position of the ?B? stack and moves the instruction pointer ?IP? to that position. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are compared. The first 'Nop' instruction code specifies which head (read-head, write-head, flow-head, or instruction pointer) is used, and the second 'Nop' instruction code specifies from which stack the position is popped." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000034 name: Head-Push def: "The instruction code 'Head-Push' is an instruction code of the transsmt instruction set that pushes the position of the instruction pointer ?IP? onto the ?B? stack. Note that this instruction code differs from the instruction code 'Inst-Read' in that it pushes the location of the specified head rather than the value at that position. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are compared. The first 'Nop' instruction code specifies which head (read-head, write-head, flow-head, or instruction pointer) is used, and the second 'Nop' instruction code specifies on which stack the position is pushed." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000035 name: If-Equal def: "The instruction code 'If-Equal' is an instruction code of the transsmt instruction set that compares the value on the top of the ?A? stack to the value on the top of the ?B? stack. If they are equal, the next instruction code (after a modifying 'Nop' instruction code, if one is present) is executed. If they are not equal, that next instruction code is skipped. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are compared." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000036 name: If-Greater def: "The instruction code 'If-Greater' is an instruction code of the transsmt instruction set that compares the value on the top of the ?A? stack to the value on the top of the ?B? stack. If the value of the ?A? stack is greater that the value of the ?B? stack, the next instruction code (after a modifying Nop' instruction code, if one is present) is executed, otherwise it will be skipped. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are compared." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000037 name: if-label def: "The instruction code 'if-label' is an instruction code of the heads_default and heads_sex instruction sets that reads in the template that follows it, and tests if its complement template was the most recent series of instruction codes copied. If so, it executes the next instruction code, otherwise it skips it. This instruction code is commonly used for a digital organism to determine when it has finished producing its offspring." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000038 name: if-less def: "The instruction code 'if-less' is an instruction code of the heads_default and heads_sex instruction sets that compares the ?BX? register to its complement. If ?BX? is the lesser of the pair, the next instruction code (after a modifying 'nop' instruction code, if one is present) is executed. If it is greater or equal, then that next instruction code is skipped. This instruction code can be modified by one 'nop' instruction code, which specifies which register is compared." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000039 name: If-Less def: "The instruction code 'If-Less' is an instruction code of the transsmt instruction set that compares the value on the top of the ?A? stack to the value on the top of the ?B? stack. If the value of the ?A? stack is less that the value of the ?B? stack, the next instruction code (after a modifying 'Nop' instruction code, if one is present) is executed, otherwise it will be skipped. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are compared." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000040 name: if-n-equ def: "The instruction code 'if-n-equ' is an instruction code of the heads_default and heads_sex instruction sets that compares the ?BX? register to its complement. If they are not equal, the next instruction code (after a modifying 'nop' instruction code, if one is present) is executed. If they are equal, that next instruction code is skipped." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000041 name: If-Not-Equal def: "The instruction code 'If-Not-Equal' is an instruction code of the transsmt instruction set that compares the value on the top of the ?A? stack to the value on the top of the ?B? stack. If they are not equal, the next instruction (after a modifying 'Nop' instruction code, if one is present) is executed. If they are equal, that next instruction code is skipped. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are compared." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000042 name: inc def: "The instruction code 'inc' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the ?BX? register and increments it by one. This instruction code is destructive (i.e., it pops the old value off the register). This instruction code can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000043 name: Inject def: "The instruction code 'Inject' is an instruction code of the transsmt instruction set that acts similarly to the instruction code 'Divide-Erase', but instead of dividing off a \"free-living\" organism, it attempts to \"infect\" a host digital organism with its parasite genome contained in the memory space pointed to by the write-head. This instruction code allows a digital organism to become a parasite digital organism." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000044 name: input-output def: "The instruction code 'input-output' is an instruction code of the heads_default and heads_sex instruction sets that takes the contents of the ?BX? register (i.e., a 32-bit binary number) and outputs it, checking it for any logic operation that may have been performed on the two 32-bit binary numbers stored in its input buffers. It also places a randomly generated 32-bit binary number from the environment into the ?BX? register. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used. Input-output instruction codes can be executed either only once or many times during the time it takes to produce an offspring. This means that a digital organism can take input numbers from the environment more than once before replicating and can compute the result of more than one logic operation." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000045 name: Inst-Read def: "The instruction code 'Inst-Read' is an instruction code of the transsmt instruction set that pushes the instruction code pointed ?IP? to by the read-head onto the ?A? stack and advances the read-head by one position. This instruction code can be modified by one or two 'Nop' instruction codes. The first 'Nop' instruction code specifies which head (read-head, write-head, flow-head, or instruction pointer) is used, and the second 'Nop' instruction code specifies on which stack the instruction pointer is pushed." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000046 name: Inst-Write def: "The instruction code 'Inst-Write' is an instruction code of the transsmt instruction set that pops the instruction code on the ?A? stack and writes it into the memory location pointed to by the write-head ?WH?, and and advances the write-head ?WH? by one position. This instruction code can be modified by one or two 'Nop' instruction codes. The first 'Nop' instruction code specifies which head (read-head, write-head, flow-head, or instruction pointer) is used, and the second 'Nop' instruction code specifies from which stack the instruction is read." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000047 name: IO def: "The instruction code 'IO' is an instruction code of the transsmt instruction set that outputs the 32-bit binary number stored at the top of the ?B? stack, checking it for any logic operation that may have been performed on the two 32-bit binary numbers stored in its input buffers. It also places a randomly generated 32-bit binary number from the environment onto the ?B? stack. Input-output instruction codes can be executed either only once or many times during the time it takes to generate an offspring. This means that a digital organism can take input numbers from the environment more than once before replicating and can compute the result of more than one logic operation. This instruction code can be modified by one or two 'Nop' instruction codes. The first 'Nop' instruction code specifies the input stack, and the second 'Nop' instruction code specifies the output stack. If only one 'Nop' instruction code is used, the same stack is used for both the input and output values. Note that the 'input-output' instruction code of the heads_default instruction set can only be modified by one 'nop' instruction code (i.e., the same register is used for both the input and output values)." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000048 name: jump-head def: "The instruction code 'jump-head' is an instruction code of the heads_default and heads_sex instruction sets that reads in the value of the CX register, and the move the instruction pointer ?IP? by that fixed amount through the organism's memory. This instruction code can be modified by one 'nop' instruction code, which specifies which head to move." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000049 name: move-head def: "The instruction code 'move-head' is an instruction code of the heads_default and heads_sex instruction sets that will cause the instruction pointer ?IP? to jump to the position in memory of the flow-head. This instruction code can be modified by one 'nop' instruction code, which specifies which head to move to the position pointed to by the flow-head." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000050 name: nand def: "The instruction code 'nand' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the BX and CX registers (each of which are 32-bit binary numbers) and performs a bitwise NAND operation on them. The result of this operation is placed in the ?BX? register. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used to place the result of this operation. Note that this is the only logic operation provided by the instruction set." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000051 name: nop def: "The instruction code 'nop' is an instruction code of the heads_default and heads_sex instruction sets that does nothing or modifies the behavior of the instruction code preceeding it by changing the virtual CPU component that it affects (register or head), or acts as part of a template to denote positions in a digital organism's genome. A register name (AX, BX, or CX) surrounded by question marks refers to that register being used by default when the instruction code in question is being executed, but if the instruction code is followed by a 'nop' instruction code, the 'nop' instruction code will alter the register used. A head abbreviation (IP, RH, WH, or FH) surrounded by question marks refers to that head being used as a default, when the instruction code in question is being executed, but if the instruction code is followed by a 'nop' instruction code, the 'nop' instruction code will alter the head used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000052 name: nop-A def: "The instruction code 'nop-A' is an instruction code of the heads_default and heads_sex instruction sets that does nothing or modifies the register being used by default to the register AX or the head being used by default to the instruction pointer." [] is_a: ONTOAVIDA:00000051 ! nop [Term] id: ONTOAVIDA:00000053 name: nop-B def: "The instruction code 'nop-B' is an instruction code of the heads_default and heads_sex instruction sets that does nothing or modifies the register being used by default to the register BX or the head being used by default to the read-head." [] is_a: ONTOAVIDA:00000051 ! nop [Term] id: ONTOAVIDA:00000054 name: nop-C def: "The instruction code 'nop-C' is an instruction code of the heads_default and heads_sex instruction sets that does nothing or modifies the register being used by default to the register CX or the head being used by default to the write-head." [] is_a: ONTOAVIDA:00000051 ! nop [Term] id: ONTOAVIDA:00000055 name: Nop def: "The instruction code 'Nop' is an instruction code of the transsmt instruction set that does nothing or modifies the behavior of the instruction code preceeding it by changing the virtual CPU component that it affects (stack or head), or acts as part of a template to denote positions in a digital organism's genome. Note that most operations that use 2 'Nop' instruction codes to specify which stacks to use can also be parameterized by a single 'Nop' instruction code, in which case the second modifier is assigned the next stack in sequence (e.g., C->D, D->A, etc.)." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000056 name: Nop-A def: "The instruction code 'Nop-A' is an instruction code of the transsmt instruction set that does nothing or modifies the stack being used by default to the stack A or the head being used by default to the instruction pointer." [] is_a: ONTOAVIDA:00000055 ! Nop [Term] id: ONTOAVIDA:00000057 name: Nop-B def: "The instruction code 'Nop-B' is aninstruction code of the transsmt instruction set that does nothing or modifies the stack being used by default to the stack B or the head being used by default to the read-head." [] is_a: ONTOAVIDA:00000055 ! Nop [Term] id: ONTOAVIDA:00000058 name: Nop-C def: "The instruction code 'Nop-C' is an instruction code of the transsmt instruction set that does nothing or modifies the stack being used by default to the stack C or the head being used by default to the write-head." [] is_a: ONTOAVIDA:00000055 ! Nop [Term] id: ONTOAVIDA:00000059 name: Nop-D def: "The instruction code 'Nop-D' is an instruction code of the transsmt instruction set that does nothing or modifies the stack being used by default to the stack D or the head being used by default to the flow-head." [] is_a: ONTOAVIDA:00000055 ! Nop [Term] id: ONTOAVIDA:00000060 name: pop def: "The instruction set 'pop' is an instruction code of the heads_default and heads_sex instruction sets that removes the top element from the active stack, and places it into the ?BX? register. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000061 name: push def: "The instruction code 'push' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the ?BX? register, and places it as a new entry at the top of the active stack.This instruction code can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000062 name: Push-Comp def: "The instruction code 'Push-Comp' is an instruction code of the transsmt instruction set that pops a value off of the ?B? stack and pushes it onto the complement stack (i.e., the stack two over in sequence), in this case, the ?D? stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify the source and the destination stacks, respectively." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000063 name: Push-Next def: "The instruction code 'Push-Next' is an instruction code of the transsmt instruction set that pops a value off of the ?A? stack and pushes it onto the next stack in sequence (the ?B? stack). This instruction code can be modified by one or two 'Nop' instruction codes, which specify the source and the destination stacks, respectively." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000064 name: Push-Prev def: "The instruction code 'Push-Prev' is an instruction code of the transsmt instruction set that pops a value off of the ?B? stack and pushes it onto the previous stack in sequence (the ?A? stack). This instruction code can be modified by one or two 'Nop' instruction codes, which specify the source and the destination stacks, respectively." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000065 name: Search def: "The instruction code 'Search' is an instruction code of the transsmt instruction set that reads in the sequence of 'Nop' instruction codes that follows it, and searches for the location of a complement template (e.g., B:C:D -> D:A:B) in a digital organism's genome. If the complement is not found, a value of 0 will be pushed to the top of the B stack. If a complement is found, the distance between the current instruction code being executed and the beginning of the complement will be pushed onto the B stack, the size of the template will be pushed on the A stack, and the flow-head will be moved to the end of the complement template." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000066 name: set-flow def: "The instruction code 'set-flow' is an instruction code of the heads_default and heads_sex instruction sets that moves the flow-head to the memory position specify by the ?CX? register. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used to move the flow-head." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000067 name: SetMemory def: "The instruction code 'SetMemory' is an instruction code of the transsmt instruction set that selects which memory space is active (I.e., which memory space the flow-head is pointing to). The memory spaces can be labeled with up to 4 'Nop' instruction codes. If no 'Nop' instruction codes are given, the memory space containing the currently executing digital organism is selected. If a 'Nop' instruction code is provided that does not yet exist, a new memory space is created." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000068 name: shift-l def: "The instruction code 'shift-l' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the ?BX? register, and shifts all of the bits in that register to the left by one, placing a zero as the new rightmost bit, and truncating any bits beyond the 32 maximum. For values that require fewer than 32 bits, it effectively multiplies that value by two. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000069 name: shift-r def: "The instruction code 'shift-r' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the ?BX? register and shifts all of the bits in that register to the right by one. In effect, it divides the value stored in the register by two, rounding down. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000070 name: sub def: "The instruction code 'sub' is an instruction code of the heads_default and heads_sex instruction sets that reads in the contents of the BX and CX registers and subtracts CX from BX. The result of this operation is then placed in the ?BX? register. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used to place the result of this operation." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000071 name: swap def: "The instruction code 'swap' is an instruction code of the heads_default and heads_sex instruction sets that swaps the contents of the ?BX? register with its complement. This instruction code can be modified by one 'nop' instruction code, which specifies which register is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000072 name: swap-stk def: "The instruction code 'swap-stk' is an instruction code of the heads_default and heads_sex instruction sets that toggles the active stack in the virtual CPU. All other instruction codes that use a stack will always use the active one." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000073 name: Val-Add def: "The instruction code 'Val-Add' is an instruction code of the transsmt instruction set that pushes the sum of values from the top of the ?B? and ?C? stacks onto the B stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are added." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000074 name: Val-Copy def: "The instruction code 'Val-Copy' is an instruction code of the transsmt instruction set that pushes a copy of the value at the top of the ?B? stack onto the ?B? stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify the source and the destination stacks, respectively. In this case, if only one 'Nop' instruction code is used, the value is copied and pushed onto the same stack as the source." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000075 name: Val-Dec def: "The instruction code 'Val-Dec' is an instruction code of the transsmt instruction set that decrements the value at the top of ?B? stack by one. This instruction code is destructive (I.e., it pops the old value off the stack)." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000076 name: Val-Delete def: "The instruction code 'Val-Delete' is an instruction code of the transsmt instruction set that pops off a value from the ?B? stack. This instruction code may be modified by one 'Nop' instruction code, which determines from which stack to remove a value." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000077 name: Val-Div def: "The instruction code 'Val-Div' is an instruction code of the transsmt instruction set that pushes the result of the integer division of the value from the top of the ?B? stack by the value at the top of the ?C? stak onto the B stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are divided. If there is an arithmetic error caused by the division, the instruction code fails and does not return a value." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000078 name: Val-Inc def: "The instruction code 'Val-Inc' is an instruction code of the transsmt instruction set that increments the value at the top of ?B? stack by one. This instruction code is destructive (i.e., it pops the old value off the stack)." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000079 name: Val-Mod def: "The instruction code 'Val-Mod' is an instruction code of the transsmt instruction set that pushes the remainder from integer division between the value from the top of the ?B? stack by the value at the top of the ?C? stak onto the B stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are divided. If there is an arithmetic error caused by the division, the instructioncode fails and does not return a value." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000080 name: Val-Mult def: "The instruction code 'Val-Mult' is an instruction code of the transsmt instruction set that pushes the result of multiplying the values from the top of the ?B? and ?C? staks onto the B stack. This instruction code can be modified by one or two 'Nop' instructions, which specify which stacks are multiplied." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000081 name: Val-Nand def: "The instruction code 'Val-Nand' is an instruction code of the transsmt instruction set that computes the bitwise NAND logic operation on the values at the top of the ?B? and ?C? stacks. The result of this operation is pushed onto the top of the B stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are used for computing the logic operation. Note that this is the only logic operation provided by the instruction set." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000082 name: Val-Shift-L def: "The instruction code 'Val-Shift-L' is an instruction code of the transsmt instruction set that shifts the value at the top of the ?B? stack over one bit to the left, effectively multiplying the value by two and ignoring any potential overflow. This instruction code can be modified by one 'Nop' instruction code, which specifies which stack is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000083 name: Val-Shift-R def: "The instruction code 'Val-Shift-R' is an instruction code of the transsmt instruction set that shifts the value at the top of the ?B? stack over one bit to the right, effectively dividing the value by two and rounding down. This instruction code can be modified by one 'Nop' instruction code, which specifies which stack is used." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000084 name: Val-Sub def: "The instruction code 'Val-Sub' is an instruction code of the transsmt instruction set that pushes the result of substracting the values from the top of the ?B? and ?C? stacks onto the B stack. This instruction code can be modified by one or two 'Nop' instruction codes, which specify which stacks are substracted." [] is_a: ONTOAVIDA:00000022 ! instruction code [Term] id: ONTOAVIDA:00000085 name: digital organism file def: "A digital organism file is a digital file containing the list of instruction codes that constitutes the genome of a digital organism in Avida." [] is_a: STATO:0000002 ! digital file [Term] id: ONTOAVIDA:00000086 name: instset-transsmt.cfg def: "An instruction set file containing the instruction set that allows host-parasite interactions to take place in Avida." [] is_a: ONTOAVIDA:00000003 ! instruction set file disjoint_from: ONTOAVIDA:00000087 ! instset-heads-sex.cfg [Term] id: ONTOAVIDA:00000087 name: instset-heads-sex.cfg def: "An instruction set file containing the instruction set that allows digital organisms reproduce sexually in Avida." [] is_a: ONTOAVIDA:00000003 ! instruction set file [Term] id: ONTOAVIDA:00000088 name: instset-heads.cfg def: "An instruction set file containing the default instruction set in Avida." [] is_a: ONTOAVIDA:00000003 ! instruction set file [Term] id: ONTOAVIDA:00000089 name: avida def: "The digital file that executes Avida." [] is_a: ONTOAVIDA:00000002 ! executable file [Term] id: ONTOAVIDA:00000090 name: analyze.cfg def: "The default analyze configuration file." [] is_a: ONTOAVIDA:00000012 ! analyze configuration file [Term] id: ONTOAVIDA:00000091 name: environment.cfg def: "The default environment configuration file. The default environment provides a digital organism with new, random input strings every time an 'input-output' instruction code ('IO' for the transsmt instruction set) is executed. The genome of a digital organism can harbor one or several input-output instructions that can be executed either only once or many times during the time it takes to generate an offspring. This means that the organism can take input numbers from the environment more than once before replicating and can compute the result of more than one logic operation." [] is_a: ONTOAVIDA:00000010 ! environment configuration file [Term] id: ONTOAVIDA:00000092 name: events.cfg def: "The default events configuration file." [] is_a: ONTOAVIDA:00000009 ! events configuration file [Term] id: ONTOAVIDA:00000093 name: avida.cfg def: "The default avida configuration file. This file is actually an excellent guide to itself; every option has a description of what it does and what its options are." [] is_a: ONTOAVIDA:00000008 ! avida configuration file [Term] id: ONTOAVIDA:00000094 name: default-heads.org def: "The default file containing a digital organism that is defined by the default instruction set and the default hardware type." [] is_a: ONTOAVIDA:00000085 ! digital organism file disjoint_from: ONTOAVIDA:00000095 ! default-transsmt.org [Term] id: ONTOAVIDA:00000095 name: default-transsmt.org def: "The default file containing a parasite digital organism that is defined by the transsmt instruction set and the transSMT hardware type." [] is_a: ONTOAVIDA:00000085 ! digital organism file [Term] id: ONTOAVIDA:00000096 name: avida experiment def: "An avida experiment is an experiment carried out in Avida using digital organisms." [] is_a: NCIT:C42790 ! experiment [Term] id: ONTOAVIDA:00000097 name: digital genome def: "A digital genome is a circular list of instruction codes that can be executed sequentially by the virtual CPU of a digital organism." [] disjoint_from: ONTOAVIDA:00000124 ! digital transcriptome disjoint_from: ONTOAVIDA:00000135 ! digital tandem repeat disjoint_from: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00000100 name: stack def: "A stack is a digital storage space that a digital organism uses for storing numbers. The default virtual CPU and the transsmt virtual CPU have two and four stacks, respectively, used for storing numbers. In the default virtual CPU, the 'push' and 'pop' instruction codes are used to move numbers between the registers and the stack, and the 'swap-stk' instruction toggles the active stack in use. A digital organism can theoretically store an arbitrary amount of data in the stacks, but for practical purposes the maximum stack depth is limited to ten." [] is_a: ONTOAVIDA:00000129 ! digital storage space [Term] id: ONTOAVIDA:00000101 name: batch def: "A batch is a digital storage space where the genomes of the digital organisms are loaded before being executed in analyze mode." [] is_a: ONTOAVIDA:00000129 ! digital storage space [Term] id: ONTOAVIDA:00000102 name: buffer def: "A buffer is a digital storage space that a digital organism uses to receive information or return the processed results." [] is_a: ONTOAVIDA:00000129 ! digital storage space [Term] id: ONTOAVIDA:00000103 name: input buffer def: "An input buffer is the buffer that a digital organism uses to receive information." [] is_a: ONTOAVIDA:00000102 ! buffer [Term] id: ONTOAVIDA:00000104 name: output buffer def: "An output buffer is the buffer that a digital organism uses to return the processed results." [] is_a: ONTOAVIDA:00000102 ! buffer [Term] id: ONTOAVIDA:00000105 name: CPU cycle def: "A CPU cycle is the amount of time it takes the virtual CPU of a digital organism in Avida to execute a single instruction code in its memory." [] [Term] id: ONTOAVIDA:00000106 name: head def: "A head is a mechanism that reads data from or writes data to the digital organism's memory space." [] [Term] id: ONTOAVIDA:00000107 name: flow-head def: "A flow-head is the head that marks the beginning of a loop in a digital organism's memory space to jump the instruction pointer back to from the loop's end." [] is_a: ONTOAVIDA:00000106 ! head [Term] id: ONTOAVIDA:00000108 name: instruction pointer def: "An instruction-pointer is the head that determines the next instruction code to be executed by the virtual CPU of a digital organism. After each execution, the instruction pointer is automaticall advanced (unless the instruction code executed dictates otherwise)." [] is_a: ONTOAVIDA:00000106 ! head [Term] id: ONTOAVIDA:00000109 name: read-head def: "A read-head is the head that determines what instruction code is copied by the virtual CPU of a digital organism when a 'h-copy' instruction code is executed ('Val-Copy' instruction code if the transsmt instruction set is used)." [] is_a: ONTOAVIDA:00000106 ! head [Term] id: ONTOAVIDA:00000110 name: write-head def: "A writ- head is the head that determines the position of a digital organism's memory space where the instruction code is going to be copied to by the virtual CPU of a digital organism." [] is_a: ONTOAVIDA:00000106 ! head [Term] id: ONTOAVIDA:00000111 name: logic operation def: "A logic operation is a mathematical function in which each bit is treated independently of all the other bits in a binary number. Thus if a logic operation 'and' was performed between two bitstrings, the first bit of the first string would be added to the first bit in the second string, the second bit to the second bit and so on." [] [Term] id: ONTOAVIDA:00000112 name: and def: "The 'and' logic operation is a logic operation on two bitstrings that returns 1 if and only if both inputs are 1 (otherwise it returns 0)." [] is_a: ONTOAVIDA:00000111 ! logic operation disjoint_from: ONTOAVIDA:00000113 ! and-not [Term] id: ONTOAVIDA:00000113 name: and-not def: "The 'and-not' logic operation is a logic operation on two bitstrings that only returns 1 if for each bit pair one input is 1 and the other input is 0 (otherwise it returns 0)." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000114 name: equals def: "The 'equals' logic operation is a logic operation on two bitstrings that returns 1 if both bits are identical, and 0 if they are different." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000115 name: not-and def: "The 'not-and' logic operation is a logic operation on two bitstrings that returns 0 if and only if both inputs at the corresponding bit positions are 1 (otherwise it returns 1)." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000116 name: not-or def: "The 'not-or' logic operation is a logic operation on two bitstrings that returns 1 only if both inputs are 0 (otherwise it returns 0)." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000117 name: not def: "The 'not' logic operation is a logic operation on a single bitstring that returns 1 at a bit position if the input is 0 at that bit position, and 0 if the input is 1." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000118 name: or def: "The 'or' logic operation is a logic operation on two bitstrings that returns 1 if either the first input, the second input, or both are 1 (otherwise it returns 0)." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000119 name: orn-not def: "The 'orn-not' logic operation is a logic operation on two bitstrings that returns 1 if for each input bit pair one input bit is 1 or the other is 0 (otherwise it returns 0)." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000120 name: exclusive or def: "The 'exclusive-or' logic opertation is a logic operation on two bitstrings that returns 1 if one but not both of the inputs are 1 (otherwise it returns 0)." [] is_a: ONTOAVIDA:00000111 ! logic operation [Term] id: ONTOAVIDA:00000124 name: digital transcriptome def: "A digital transcriptome is a list of the instruction codes that have been executed by the virtual CPU of a digital organism during its replication." [] disjoint_from: ONTOAVIDA:00000135 ! digital tandem repeat disjoint_from: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00000126 name: register def: "A register is a digital storage space that a digital organism uses for storing a single number. The default virtual CPU contains three registers (XA, XB, and XC), each of which is made up of 32 bits. All math-based instruction codes operate on the registers, and various instruction codes will move the values in the registers around." [] is_a: ONTOAVIDA:00000129 ! digital storage space [Term] id: ONTOAVIDA:00000127 name: update def: "An update is the amount of time during which a digital organism executes on average 30 instruction codes from its genome." [] [Term] id: ONTOAVIDA:00000128 name: digital organism memory def: "A digital organism memory is a digital storage space that a digital organism uses to hold a sequence of instruction codes to be executed. The memory space is initialize to the genome of the digital organism, but it will be modified over the lifetime of the digital organism, typically as an offspring is produced. As section of the memory is then divided off to initialize the offspring. Memory is treated as circular, such that execution will loop back to the first instruction code after the last instruction code has been executed." [] is_a: ONTOAVIDA:00000129 ! digital storage space [Term] id: ONTOAVIDA:00000129 name: digital storage space def: "A digital storage space is a memory or disk space of a computer that is used to retain digital data." [] [Term] id: ONTOAVIDA:00000130 name: instruction set def: "An instruction set is a list of instruction codes that a digital organism can hold in its genome (i.e., its genetic language)." [] [Term] id: ONTOAVIDA:00000131 name: heads_default def: "The heads_default instruction set is the default instruction set in Avida." [] is_a: ONTOAVIDA:00000130 ! instruction set disjoint_from: ONTOAVIDA:00000132 ! heads_sex [Term] id: ONTOAVIDA:00000132 name: heads_sex def: "The heads_sex instruction set is the instruction set that allows digital organisms reproduce sexually in Avida." [] is_a: ONTOAVIDA:00000130 ! instruction set [Term] id: ONTOAVIDA:00000133 name: transsmt def: "The transsmt instruction set is the instruction set that allows host-parasite interactions to take place in Avida." [] is_a: ONTOAVIDA:00000130 ! instruction set [Term] id: ONTOAVIDA:00000135 name: digital tandem repeat def: "A digital tandem repeat is a string of two or more instruction codes within a digital transcriptome that are executed sequentially more than once by a digital organism." [] disjoint_from: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00000136 name: template def: "A template is a sequence of no-operation instruction codes ('nop' or 'Nop', for the heads_default and transsmt instruction sets, respectively) used to mark regions of code within a digital organism's genome." [] [Term] id: ONTOAVIDA:00000137 name: nop notation def: "A nop notation is a single or two capital letters (IP, RH, WH, or FH for heads; AX, BX, and CX for registers; and A, B, C, D for stacks) surrounded by question marks that refer to the head, register, or stack being used as a default." [] [Term] id: ONTOAVIDA:00000138 name: nop-head notation def: "A nop-head notation is a two-letter notation (IP, RH, WH, or FH) surrounded by question marks that refers to that head being used as a default, when the instruction code in question is being executed. But if the instruction code is followed by a no-operation ('nop' or 'Nop') instruction code, the 'nop' or 'Nop' instruction code will alter the register used. A 'nop-A' or 'Nop-A' instruction code indicates the instruction pointer (IP); a 'nop-B' or 'Nop-B' instruction code indicates the read-head (RH); a 'nop-C' or 'Nop-C' instruction code indicates the write-head (WH); and a 'Nop-D' instruction code indicates the flow-head (FH)." [] is_a: ONTOAVIDA:00000137 ! nop notation [Term] id: ONTOAVIDA:00000139 name: nop-register notation def: "A nop-register notation is a two-letter notation (AX, BX, or CX) surrounded by question marks that refers to that register being used by default when the instruction in question is being executed. But if the instruction code is followed by a no-operation ('nop') instruction code, the 'nop' instruction code will alter the register used. A 'nop-A' instruction indicates the AX register; a 'nop-B' instruction code indicates the BX register; and a 'nop-C' instruction code indicates the CX register. It does not apply to the transsmt virtual CPU because the Transsmt hardware does not use registers." [] is_a: ONTOAVIDA:00000137 ! nop notation [Term] id: ONTOAVIDA:00000140 name: nop-stack notation def: "A nop-stack notation is a single-letter noation (A, B, C, or D) surrounded by question marks that refers to that stack being used by default when the instruction code in question is being executed. But if the instruction code is followed by a no-operation ('Nop') instruction code, the 'Nop' instruction code will alter the register used. A 'Nop-A' instruction code indicates the stack A; a 'Nop-B' instruction code indicates the stack B; a 'Nop-C' instruction code indicates the stack C; and a 'Nop-D' instruction code indicates the stack D. It only applies to the transsmt virtual CPU, because the TransSMT hardware does not use registers." [] is_a: ONTOAVIDA:00000137 ! nop notation [Term] id: ONTOAVIDA:00000141 name: hardware type def: "A hardware type is the way the memory of a digital organism and the execution threads are managed by Avida." [] [Term] id: ONTOAVIDA:00000142 name: TransSMT hardware def: "The TransSMT hardware is the hardware type that allows host-parasite interactions to take place in Avida." [] is_a: ONTOAVIDA:00000141 ! hardware type disjoint_from: ONTOAVIDA:00000143 ! default hardware [Term] id: ONTOAVIDA:00000143 name: default hardware def: "The default hardware is the default hardware type used in Avida." [] is_a: ONTOAVIDA:00000141 ! hardware type [Term] id: ONTOAVIDA:00000144 name: analyze configuration command def: "The analyze configuration command is a directive included in the analyze configuration file that is used for loading, manipulating, and saving data from an experiment performed in the analyze mode of Avida." [] is_a: ONTOAVIDA:00000011 ! configuration command [Term] id: ONTOAVIDA:00000145 name: analyze configuration DETAIL command def: "The analyze configuration DETAIL command is an analyze configuration command that, after the execution of an analyze configuration RECALC or RECALCULATE command, writes statistics of the genomes of the digital organisms (one per line) loaded in a batch and executed in analyze mode to an output file." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000146 name: analyze configuration LOAD_ORGANISM command def: "The analyze configuration LOAD_ORGANISM command is an analyze configuration command that loads a single genome in a batch from a digital organism file." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000147 name: analyze configuration LOAD_SEQUENCE command def: "The analyze configuration LOAD_SEQUENCE command is an analyze configuration command that loads a single genome in a batch from a genome instruction sequence." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000148 name: analyze configuration RECALCULATE command def: "The analyze configuration RECALCULATE command is an analyze configuration command that runs all of the genomes loaded in the current batch through a test virtual CPU and records the measurements taken (fitness, gestation time, etc.). This command overrides any values that may have been loaded in with the genomes. The \"use_resources\" flags means whether or not the test virtual CPU will use resources when it runs. If the \"use_random_inputs\" flag is set, then digital organisms will be provided with new, random input 32-bit binary numbers for each trace as they would experience during an experiment performed using the standard mode of Avida. By default, the same inputs are provided every time to digital organisms in analyze mode. Phenotypic plasticity information is not available from the analyze configuration RECALCULATE command (you should use the analyze configuration RECALC command with \"num_trials X\", where X is greater than 1, for phenotypic plasticity statistics)." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000149 name: analyze configuration RECALC command def: "The analyze configuration RECALC command is an analyze configuration command that performs the same operations as the analyze configuration RECALCULATE command but has a few additional features (e.g., computes phenotypic plasticity). If \"num_trials\" is set to greater than one, random inputs will be used to gather phenotypic plasticity information. Please note that phenotypic plasticity analysis performed by using the analyze configuration RECALC command will reset genome statistics to the values for the most likely phenotype. Implicit phenotypic plasticity analysis (e.g. by not calling RECALC or calling RECALC with \"num_trials 1\") will not re-evaluate the genome statistics in this manner and instead rely on the initial values or those values from a single recalculation." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000150 name: analyze configuration TRACE command def: "The analyze configuration TRACE command is an analyze configuration command that shows step-by-step the status of all of the virtual CPU components and the genome of a digital organism during the course of its execution in analyze mode. The filename used for each trace will be the genotype's name with a \".trace\" appended. Four parameters need to be specified: the name of the folder that will contain the trace files, whether the digital organism uses resources (1) or not (0) when running in analyze mode, the update at which resources will be available (-1 if resources are not used), and whether the environment configuration file provides new random input numbers to the digital organisms (1) or not (0) everytime the analyze mode is called." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000151 name: digital phenotype def: "A digital phenotype is a unique combination of logic operations that the digital organism performs on 32-bit one- and two-binary input numbers. Any two digital organisms that compute the same logic operations are considered to have the same phenotype." [] [Term] id: ONTOAVIDA:00000155 name: avida configuration command def: "An avida configuration command is a directive included in the avida configuration file that is used for setting up all the basic conditions for performing an experiment in the standard mode of Avida." [] is_a: ONTOAVIDA:00000011 ! configuration command [Term] id: ONTOAVIDA:00000157 name: execution thread def: "A thread of execution is the smallest sequence of programmed instructions that can be managed independently by a scheduler, which is typically a part of the operating system." [] [Term] id: ONTOAVIDA:00000162 name: analyze configuration PURGE_BATCH command def: "The analyze configuration PURGE_BATCH command is an analyze configuration command that remove the genomes of all digital organisms loaded in a batch." [] is_a: ONTOAVIDA:00000144 ! analyze configuration command [Term] id: ONTOAVIDA:00000163 name: environment configuration command def: "An environment configuration command is a directive included in the environment configuration file that is used for xxx from an experiment performed in the standard mode of Avida." [] is_a: ONTOAVIDA:00000011 ! configuration command [Term] id: ONTOAVIDA:00000164 name: events configuration command def: "An events configuration command is a directive included in the events configuration file that is used for controlling the events that need to occur throughout the course of an experiment performed in the standard mode of Avida. An event configuration command will be triggered either a single time or periodically. The format for each command is: 'type' 'timing' 'event' 'arguments'. The type determines what kind of timings the event will be based off of (i.e., immediate 'i', based on update 'u', or based on generation 'g'). The timing should only be included for non-immediate events. If a single number is given for timing, the event occurs at that update/generation. A second number can be included (separated by a colon ':') to indicate how often the event should be repeated. And if a third number is listed (again, colon seperated) this will be the last time the event can occur on. The event is simply the name of the action that should be performed, and the arguments detail exactly how it should work when it is triggered." [] is_a: ONTOAVIDA:00000011 ! configuration command [Term] id: ONTOAVIDA:00000165 name: environment configuration RESOURCE command def: "An environment configuration RESOURCE command is an environment configuration command that allow us to set up a computational quantity (i.e., resource) that can be used to modify the fitness of a digital organism. The resource can be a global quantity or a quantity that vary from cell to cell within the world grid." [] is_a: ONTOAVIDA:00000163 ! environment configuration command [Term] id: ONTOAVIDA:00000168 name: world grid def: "A world grid is the topology of the world where digital organisms live." [] [Term] id: ONTOAVIDA:00000169 name: world grid cell def: "A world grid cell is a unit that make up the world grid." [] [Term] id: ONTOAVIDA:00000170 name: environment configuration REACTION command def: "An environment configuration REACTION command is an environment configuration command that allows us to set up a computational function that can be used by a digital organism to consume or produce resources when it performs certain logic operations. By defining reactions, a digital organism can be rewarded or punished for performing the logic operations that triggers them." [] is_a: ONTOAVIDA:00000163 ! environment configuration command [Term] id: ONTOAVIDA:00000171 name: events configuration Exit command def: "An event configuration Exit command is an event configuration command that allows us to specify the end of an experiment performed in the standard mode of Avida." [] is_a: ONTOAVIDA:00000164 ! events configuration command [Term] id: ONTOAVIDA:00000172 name: events configuration SavePopulation command def: "An event configuration SavePopulation command is an event configuration command that allows us to save the state of the entire population of digital organisms to a file at any time during the course of an experiment performed in the standard mode of Avida." [] is_a: ONTOAVIDA:00000164 ! events configuration command [Term] id: ONTOAVIDA:00000173 name: events configuration InjectRange command def: "An event configuration InjectRange command is an event configuration command that allows us to add digital organisms to the world grid at any time during the course of an experiment performed in the standard mode of Avida." [] is_a: ONTOAVIDA:00000164 ! events configuration command [Term] id: ONTOAVIDA:00000174 name: complementary template def: "A complementary template is a sequence of 'nop' instructions that are found, in the heads_default and heads_sex instruction sets, by taking each 'nop' instruction that makes up that template, and shifting it to the next in alphabetical order, looping around at the end. Thus, 'nop-A' -> 'nop-B' -> 'nop-C' -> 'nop-A'. In the transsmt instruction set, the complement is the template where each 'Nop' is shifted over in sequence by 2, such that the complement of the complement recovers the original template: 'Nop-A' -> 'Nop-C' -> 'Nop-A' and 'Nop-B' -> 'Nop-D' -> 'Nop-B'." [] [Term] id: ONTOAVIDA:00000190 name: multiple-trait digital organism def: "A multiple-trait digital organism is a digital organism that computes more than one logic operation." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000182 ONTOAVIDA:00000111 {minCardinality="2"} ! computes logic operation disjoint_from: ONTOAVIDA:00001209 ! merely-viable digital organism disjoint_from: ONTOAVIDA:00001210 ! single-trait digital organism relationship: ONTOAVIDA:00000182 ONTOAVIDA:00000111 ! computes logic operation [Term] id: ONTOAVIDA:00001201 name: logic9 def: "A logic environment where 9 logic operations are listed in the environment configuration file." [] is_a: ONTOAVIDA:00000007 ! logic environment [Term] id: ONTOAVIDA:00001202 name: logic77 def: "A logic environment where 77 logic operations are listed in the environment configuration file." [] is_a: ONTOAVIDA:00000007 ! logic environment [Term] id: ONTOAVIDA:00001205 name: plastic digital organism def: "A plastic digital organism is a digital organism whose genome encodes distinct phenotypes in different environments (i.e., a digital organism that computes different logic operations in different environments)." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000134 ONTOAVIDA:00000151 {minCardinality="2"} ! has digital phenotype digital phenotype disjoint_from: ONTOAVIDA:00001206 ! non-plastic digital organism relationship: ONTOAVIDA:00000134 ONTOAVIDA:00000151 ! has digital phenotype digital phenotype [Term] id: ONTOAVIDA:00001206 name: non-plastic digital organism def: "A non-plastic digital organism is a digital organism whose genome encodes the same phenotype in all environments (i.e., a digital organism that computes the same set of logic operations in all environments)." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000134 ONTOAVIDA:00000151 {cardinality="1"} ! has digital phenotype digital phenotype relationship: ONTOAVIDA:00000134 ONTOAVIDA:00000151 ! has digital phenotype digital phenotype [Term] id: ONTOAVIDA:00001207 name: transcriptome-robust digital organism def: "A transcriptome-robust digital organism is a digital organism that executes the same transcriptome in all environments (i.e., a digital organism that executes the same instruction codes in all environments)." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000004 ONTOAVIDA:00000124 {cardinality="1"} ! executes digital transcriptome disjoint_from: ONTOAVIDA:00001208 ! transcriptome-sensitive digital organism relationship: ONTOAVIDA:00000004 ONTOAVIDA:00000124 ! executes digital transcriptome [Term] id: ONTOAVIDA:00001208 name: transcriptome-sensitive digital organism def: "A transcriptome-sensitive digital organism is a digital organism that executes distinct transcriptomes in different environments (i.e., a digital organism that executes different instruction codes in different environments)." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000004 ONTOAVIDA:00000124 {minCardinality="2"} ! executes digital transcriptome relationship: ONTOAVIDA:00000004 ONTOAVIDA:00000124 ! executes digital transcriptome [Term] id: ONTOAVIDA:00001209 name: merely-viable digital organism def: "A merely-viable digital organism is a digital organism that does not compute any logic operation (i.e., it can only produce an offpring)." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000182 ONTOAVIDA:00000111 {cardinality="0"} ! computes logic operation disjoint_from: ONTOAVIDA:00001210 ! single-trait digital organism [Term] id: ONTOAVIDA:00001210 name: single-trait digital organism def: "A single-trait digital organism is a digital organism that computes a single logic operation." [] is_a: GSSO:009994 ! digital organism intersection_of: GSSO:009994 ! digital organism intersection_of: ONTOAVIDA:00000182 ONTOAVIDA:00000111 {cardinality="1"} ! computes logic operation relationship: ONTOAVIDA:00000182 ONTOAVIDA:00000111 ! computes logic operation [Term] id: ONTOAVIDA:00002001 name: digital organism phenotype 0 def: "The digital phenotype of the logic9 environment that a digital organism that is not capable of computing any logic operation has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002002 name: digital organism phenotype 1 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002003 name: digital organism phenotype 2 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'not-and' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002004 name: digital organism phenotype 3 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'not-and' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002005 name: digital organism phenotype 4 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'and' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002006 name: digital organism phenotype 5 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'and' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002007 name: digital organism phenotype 6 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'and' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002008 name: digital organism phenotype 7 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'and' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002009 name: digital organism phenotype 8 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002010 name: digital organism phenotype 9 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002011 name: digital organism phenotype 10 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002012 name: digital organism phenotype 11 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002013 name: digital organism phenotype 12 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002014 name: digital organism phenotype 13 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002015 name: digital organism phenotype 14 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002016 name: digital organism phenotype 15 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and' and 'orn-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002017 name: digital organism phenotype 16 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002018 name: digital organism phenotype 17 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002019 name: digital organism phenotype 18 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002020 name: digital organism phenotype 19 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002021 name: digital organism phenotype 20 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002022 name: digital organism phenotype 21 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002023 name: digital organism phenotype 22 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002024 name: digital organism phenotype 23 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002025 name: digital organism phenotype 24 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002026 name: digital organism phenotype 25 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002027 name: digital organism phenotype 26 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002028 name: digital organism phenotype 27 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002029 name: digital organism phenotype 28 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002030 name: digital organism phenotype 29 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002031 name: digital organism phenotype 30 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002032 name: digital organism phenotype 31 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not' and 'or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002033 name: digital organism phenotype 32 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002034 name: digital organism phenotype 33 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002035 name: digital organism phenotype 34 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002036 name: digital organism phenotype 35 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002037 name: digital organism phenotype 36 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002038 name: digital organism phenotype 37 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002039 name: digital organism phenotype 38 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002040 name: digital organism phenotype 39 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002041 name: digital organism phenotype 40 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002042 name: digital organism phenotype 41 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002043 name: digital organism phenotype 42 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002044 name: digital organism phenotype 43 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002045 name: digital organism phenotype 44 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002046 name: digital organism phenotype 45 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002047 name: digital organism phenotype 46 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002048 name: digital organism phenotype 47 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002049 name: digital organism phenotype 48 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002050 name: digital organism phenotype 49 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002051 name: digital organism phenotype 50 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002052 name: digital organism phenotype 51 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002053 name: digital organism phenotype 52 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002054 name: digital organism phenotype 53 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002055 name: digital organism phenotype 54 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002056 name: digital organism phenotype 55 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002057 name: digital organism phenotype 56 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002058 name: digital organism phenotype 57 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002059 name: digital organism phenotype 58 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002060 name: digital organism phenotype 59 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002061 name: digital organism phenotype 60 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002062 name: digital organism phenotype 61 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002063 name: digital organism phenotype 62 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002064 name: digital organism phenotype 63 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or' and 'and-not' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002065 name: digital organism phenotype 64 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002066 name: digital organism phenotype 65 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002067 name: digital organism phenotype 66 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002068 name: digital organism phenotype 67 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002069 name: digital organism phenotype 68 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002070 name: digital organism phenotype 69 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002071 name: digital organism phenotype 70 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002072 name: digital organism phenotype 71 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002073 name: digital organism phenotype 72 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002074 name: digital organism phenotype 73 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002075 name: digital organism phenotype 74 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002076 name: digital organism phenotype 75 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002077 name: digital organism phenotype 76 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002078 name: digital organism phenotype 77 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002079 name: digital organism phenotype 78 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002080 name: digital organism phenotype 79 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002081 name: digital organism phenotype 80 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002082 name: digital organism phenotype 81 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002083 name: digital organism phenotype 82 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002084 name: digital organism phenotype 83 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002085 name: digital organism phenotype 84 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002086 name: digital organism phenotype 85 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002087 name: digital organism phenotype 86 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002088 name: digital organism phenotype 87 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002089 name: digital organism phenotype 88 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002090 name: digital organism phenotype 89 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002091 name: digital organism phenotype 90 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002092 name: digital organism phenotype 91 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002093 name: digital organism phenotype 92 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002094 name: digital organism phenotype 93 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002095 name: digital organism phenotype 94 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002096 name: digital organism phenotype 95 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002097 name: digital organism phenotype 96 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002098 name: digital organism phenotype 97 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002099 name: digital organism phenotype 98 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002100 name: digital organism phenotype 99 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002101 name: digital organism phenotype 100 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002102 name: digital organism phenotype 101 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002103 name: digital organism phenotype 102 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002104 name: digital organism phenotype 103 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002105 name: digital organism phenotype 104 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002106 name: digital organism phenotype 105 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002107 name: digital organism phenotype 106 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002108 name: digital organism phenotype 107 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002109 name: digital organism phenotype 108 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002110 name: digital organism phenotype 109 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002111 name: digital organism phenotype 110 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002112 name: digital organism phenotype 111 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002113 name: digital organism phenotype 112 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002114 name: digital organism phenotype 113 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002115 name: digital organism phenotype 114 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002116 name: digital organism phenotype 115 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002117 name: digital organism phenotype 116 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002118 name: digital organism phenotype 117 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002119 name: digital organism phenotype 118 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002120 name: digital organism phenotype 119 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002121 name: digital organism phenotype 120 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002122 name: digital organism phenotype 121 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002123 name: digital organism phenotype 122 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002124 name: digital organism phenotype 123 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002125 name: digital organism phenotype 124 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002126 name: digital organism phenotype 125 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002127 name: digital organism phenotype 126 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002128 name: digital organism phenotype 127 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not' and 'not-or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002129 name: digital organism phenotype 128 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002130 name: digital organism phenotype 129 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002131 name: digital organism phenotype 130 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002132 name: digital organism phenotype 131 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002133 name: digital organism phenotype 132 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002134 name: digital organism phenotype 133 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002135 name: digital organism phenotype 134 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002136 name: digital organism phenotype 135 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002137 name: digital organism phenotype 136 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002138 name: digital organism phenotype 137 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002139 name: digital organism phenotype 138 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002140 name: digital organism phenotype 139 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002141 name: digital organism phenotype 140 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002142 name: digital organism phenotype 141 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002143 name: digital organism phenotype 142 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002144 name: digital organism phenotype 143 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002145 name: digital organism phenotype 144 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002146 name: digital organism phenotype 145 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002147 name: digital organism phenotype 146 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002148 name: digital organism phenotype 147 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002149 name: digital organism phenotype 148 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002150 name: digital organism phenotype 149 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002151 name: digital organism phenotype 150 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002152 name: digital organism phenotype 151 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002153 name: digital organism phenotype 152 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002154 name: digital organism phenotype 153 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002155 name: digital organism phenotype 154 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002156 name: digital organism phenotype 155 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002157 name: digital organism phenotype 156 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002158 name: digital organism phenotype 157 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002159 name: digital organism phenotype 158 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002160 name: digital organism phenotype 159 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002161 name: digital organism phenotype 160 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002162 name: digital organism phenotype 161 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002163 name: digital organism phenotype 162 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002164 name: digital organism phenotype 163 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002165 name: digital organism phenotype 164 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002166 name: digital organism phenotype 165 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002167 name: digital organism phenotype 166 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002168 name: digital organism phenotype 167 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002169 name: digital organism phenotype 168 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002170 name: digital organism phenotype 169 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002171 name: digital organism phenotype 170 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002172 name: digital organism phenotype 171 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002173 name: digital organism phenotype 172 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002174 name: digital organism phenotype 173 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002175 name: digital organism phenotype 174 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002176 name: digital organism phenotype 175 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002177 name: digital organism phenotype 176 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002178 name: digital organism phenotype 177 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002179 name: digital organism phenotype 178 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002180 name: digital organism phenotype 179 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002181 name: digital organism phenotype 180 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002182 name: digital organism phenotype 181 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002183 name: digital organism phenotype 182 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002184 name: digital organism phenotype 183 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002185 name: digital organism phenotype 184 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002186 name: digital organism phenotype 185 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002187 name: digital organism phenotype 186 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002188 name: digital organism phenotype 187 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002189 name: digital organism phenotype 188 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002190 name: digital organism phenotype 189 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002191 name: digital organism phenotype 190 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002192 name: digital organism phenotype 191 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002193 name: digital organism phenotype 192 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002194 name: digital organism phenotype 193 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002195 name: digital organism phenotype 194 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002196 name: digital organism phenotype 195 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002197 name: digital organism phenotype 196 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002198 name: digital organism phenotype 197 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002199 name: digital organism phenotype 198 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002200 name: digital organism phenotype 199 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002201 name: digital organism phenotype 200 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002202 name: digital organism phenotype 201 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002203 name: digital organism phenotype 202 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002204 name: digital organism phenotype 203 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002205 name: digital organism phenotype 204 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002206 name: digital organism phenotype 205 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002207 name: digital organism phenotype 206 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002208 name: digital organism phenotype 207 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002209 name: digital organism phenotype 208 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002210 name: digital organism phenotype 209 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002211 name: digital organism phenotype 210 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002212 name: digital organism phenotype 211 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002213 name: digital organism phenotype 212 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002214 name: digital organism phenotype 213 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002215 name: digital organism phenotype 214 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002216 name: digital organism phenotype 215 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002217 name: digital organism phenotype 216 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002218 name: digital organism phenotype 217 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002219 name: digital organism phenotype 218 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002220 name: digital organism phenotype 219 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002221 name: digital organism phenotype 220 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002222 name: digital organism phenotype 221 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002223 name: digital organism phenotype 222 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002224 name: digital organism phenotype 223 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002225 name: digital organism phenotype 224 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002226 name: digital organism phenotype 225 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002227 name: digital organism phenotype 226 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002228 name: digital organism phenotype 227 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002229 name: digital organism phenotype 228 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002230 name: digital organism phenotype 229 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002231 name: digital organism phenotype 230 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002232 name: digital organism phenotype 231 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002233 name: digital organism phenotype 232 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002234 name: digital organism phenotype 233 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002235 name: digital organism phenotype 234 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002236 name: digital organism phenotype 235 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002237 name: digital organism phenotype 236 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002238 name: digital organism phenotype 237 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002239 name: digital organism phenotype 238 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002240 name: digital organism phenotype 239 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002241 name: digital organism phenotype 240 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002242 name: digital organism phenotype 241 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002243 name: digital organism phenotype 242 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002244 name: digital organism phenotype 243 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002245 name: digital organism phenotype 244 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002246 name: digital organism phenotype 245 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002247 name: digital organism phenotype 246 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002248 name: digital organism phenotype 247 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002249 name: digital organism phenotype 248 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002250 name: digital organism phenotype 249 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002251 name: digital organism phenotype 250 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002252 name: digital organism phenotype 251 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002253 name: digital organism phenotype 252 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002254 name: digital organism phenotype 253 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002255 name: digital organism phenotype 254 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002256 name: digital organism phenotype 255 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'exclusive or' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002257 name: digital organism phenotype 256 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operation 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002258 name: digital organism phenotype 257 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002259 name: digital organism phenotype 258 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002260 name: digital organism phenotype 259 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002261 name: digital organism phenotype 260 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002262 name: digital organism phenotype 261 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002263 name: digital organism phenotype 262 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002264 name: digital organism phenotype 263 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002265 name: digital organism phenotype 264 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002266 name: digital organism phenotype 265 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002267 name: digital organism phenotype 266 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002268 name: digital organism phenotype 267 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002269 name: digital organism phenotype 268 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002270 name: digital organism phenotype 269 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002271 name: digital organism phenotype 270 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002272 name: digital organism phenotype 271 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002273 name: digital organism phenotype 272 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002274 name: digital organism phenotype 273 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002275 name: digital organism phenotype 274 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002276 name: digital organism phenotype 275 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002277 name: digital organism phenotype 276 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002278 name: digital organism phenotype 277 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002279 name: digital organism phenotype 278 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002280 name: digital organism phenotype 279 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002281 name: digital organism phenotype 280 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002282 name: digital organism phenotype 281 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002283 name: digital organism phenotype 282 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002284 name: digital organism phenotype 283 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002285 name: digital organism phenotype 284 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002286 name: digital organism phenotype 285 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002287 name: digital organism phenotype 286 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002288 name: digital organism phenotype 287 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002289 name: digital organism phenotype 288 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002290 name: digital organism phenotype 289 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002291 name: digital organism phenotype 290 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002292 name: digital organism phenotype 291 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002293 name: digital organism phenotype 292 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002294 name: digital organism phenotype 293 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002295 name: digital organism phenotype 294 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002296 name: digital organism phenotype 295 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002297 name: digital organism phenotype 296 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002298 name: digital organism phenotype 297 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002299 name: digital organism phenotype 298 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002300 name: digital organism phenotype 299 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002301 name: digital organism phenotype 300 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002302 name: digital organism phenotype 301 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002303 name: digital organism phenotype 302 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002304 name: digital organism phenotype 303 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002305 name: digital organism phenotype 304 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002306 name: digital organism phenotype 305 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002307 name: digital organism phenotype 306 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002308 name: digital organism phenotype 307 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002309 name: digital organism phenotype 308 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002310 name: digital organism phenotype 309 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002311 name: digital organism phenotype 310 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002312 name: digital organism phenotype 311 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002313 name: digital organism phenotype 312 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002314 name: digital organism phenotype 313 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002315 name: digital organism phenotype 314 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002316 name: digital organism phenotype 315 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002317 name: digital organism phenotype 316 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002318 name: digital organism phenotype 317 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002319 name: digital organism phenotype 318 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002320 name: digital organism phenotype 319 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002321 name: digital organism phenotype 320 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002322 name: digital organism phenotype 321 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002323 name: digital organism phenotype 322 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002324 name: digital organism phenotype 323 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002325 name: digital organism phenotype 324 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002326 name: digital organism phenotype 325 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002327 name: digital organism phenotype 326 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002328 name: digital organism phenotype 327 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002329 name: digital organism phenotype 328 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002330 name: digital organism phenotype 329 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002331 name: digital organism phenotype 330 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002332 name: digital organism phenotype 331 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002333 name: digital organism phenotype 332 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002334 name: digital organism phenotype 333 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002335 name: digital organism phenotype 334 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002336 name: digital organism phenotype 335 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002337 name: digital organism phenotype 336 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002338 name: digital organism phenotype 337 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002339 name: digital organism phenotype 338 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002340 name: digital organism phenotype 339 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002341 name: digital organism phenotype 340 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002342 name: digital organism phenotype 341 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002343 name: digital organism phenotype 342 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002344 name: digital organism phenotype 343 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002345 name: digital organism phenotype 344 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002346 name: digital organism phenotype 345 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002347 name: digital organism phenotype 346 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002348 name: digital organism phenotype 347 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002349 name: digital organism phenotype 348 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002350 name: digital organism phenotype 349 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002351 name: digital organism phenotype 350 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002352 name: digital organism phenotype 351 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002353 name: digital organism phenotype 352 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002354 name: digital organism phenotype 353 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002355 name: digital organism phenotype 354 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002356 name: digital organism phenotype 355 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002357 name: digital organism phenotype 356 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002358 name: digital organism phenotype 357 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002359 name: digital organism phenotype 358 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002360 name: digital organism phenotype 359 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002361 name: digital organism phenotype 360 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002362 name: digital organism phenotype 361 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002363 name: digital organism phenotype 362 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002364 name: digital organism phenotype 363 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002365 name: digital organism phenotype 364 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002366 name: digital organism phenotype 365 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002367 name: digital organism phenotype 366 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002368 name: digital organism phenotype 367 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002369 name: digital organism phenotype 368 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002370 name: digital organism phenotype 369 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002371 name: digital organism phenotype 370 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002372 name: digital organism phenotype 371 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002373 name: digital organism phenotype 372 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002374 name: digital organism phenotype 373 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002375 name: digital organism phenotype 374 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002376 name: digital organism phenotype 375 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002377 name: digital organism phenotype 376 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002378 name: digital organism phenotype 377 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002379 name: digital organism phenotype 378 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002380 name: digital organism phenotype 379 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002381 name: digital organism phenotype 380 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002382 name: digital organism phenotype 381 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002383 name: digital organism phenotype 382 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002384 name: digital organism phenotype 383 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not', 'not-or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002385 name: digital organism phenotype 384 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002386 name: digital organism phenotype 385 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002387 name: digital organism phenotype 386 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002388 name: digital organism phenotype 387 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002389 name: digital organism phenotype 388 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002390 name: digital organism phenotype 389 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002391 name: digital organism phenotype 390 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002392 name: digital organism phenotype 391 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002393 name: digital organism phenotype 392 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002394 name: digital organism phenotype 393 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002395 name: digital organism phenotype 394 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002396 name: digital organism phenotype 395 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002397 name: digital organism phenotype 396 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002398 name: digital organism phenotype 397 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002399 name: digital organism phenotype 398 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002400 name: digital organism phenotype 399 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002401 name: digital organism phenotype 400 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002402 name: digital organism phenotype 401 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002403 name: digital organism phenotype 402 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002404 name: digital organism phenotype 403 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002405 name: digital organism phenotype 404 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002406 name: digital organism phenotype 405 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002407 name: digital organism phenotype 406 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002408 name: digital organism phenotype 407 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002409 name: digital organism phenotype 408 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002410 name: digital organism phenotype 409 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002411 name: digital organism phenotype 410 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002412 name: digital organism phenotype 411 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002413 name: digital organism phenotype 412 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002414 name: digital organism phenotype 413 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002415 name: digital organism phenotype 414 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002416 name: digital organism phenotype 415 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002417 name: digital organism phenotype 416 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002418 name: digital organism phenotype 417 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002419 name: digital organism phenotype 418 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002420 name: digital organism phenotype 419 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002421 name: digital organism phenotype 420 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002422 name: digital organism phenotype 421 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002423 name: digital organism phenotype 422 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002424 name: digital organism phenotype 423 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002425 name: digital organism phenotype 424 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002426 name: digital organism phenotype 425 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002427 name: digital organism phenotype 426 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002428 name: digital organism phenotype 427 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002429 name: digital organism phenotype 428 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002430 name: digital organism phenotype 429 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002431 name: digital organism phenotype 430 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002432 name: digital organism phenotype 431 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002433 name: digital organism phenotype 432 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002434 name: digital organism phenotype 433 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002435 name: digital organism phenotype 434 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002436 name: digital organism phenotype 435 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002437 name: digital organism phenotype 436 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002438 name: digital organism phenotype 437 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002439 name: digital organism phenotype 438 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002440 name: digital organism phenotype 439 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002441 name: digital organism phenotype 440 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002442 name: digital organism phenotype 441 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002443 name: digital organism phenotype 442 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002444 name: digital organism phenotype 443 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002445 name: digital organism phenotype 444 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002446 name: digital organism phenotype 445 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002447 name: digital organism phenotype 446 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002448 name: digital organism phenotype 447 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002449 name: digital organism phenotype 448 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002450 name: digital organism phenotype 449 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002451 name: digital organism phenotype 450 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002452 name: digital organism phenotype 451 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002453 name: digital organism phenotype 452 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002454 name: digital organism phenotype 453 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002455 name: digital organism phenotype 454 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002456 name: digital organism phenotype 455 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002457 name: digital organism phenotype 456 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002458 name: digital organism phenotype 457 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002459 name: digital organism phenotype 458 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002460 name: digital organism phenotype 459 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002461 name: digital organism phenotype 460 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002462 name: digital organism phenotype 461 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002463 name: digital organism phenotype 462 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002464 name: digital organism phenotype 463 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002465 name: digital organism phenotype 464 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002466 name: digital organism phenotype 465 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002467 name: digital organism phenotype 466 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002468 name: digital organism phenotype 467 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002469 name: digital organism phenotype 468 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002470 name: digital organism phenotype 469 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002471 name: digital organism phenotype 470 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002472 name: digital organism phenotype 471 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002473 name: digital organism phenotype 472 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002474 name: digital organism phenotype 473 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002475 name: digital organism phenotype 474 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002476 name: digital organism phenotype 475 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002477 name: digital organism phenotype 476 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002478 name: digital organism phenotype 477 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002479 name: digital organism phenotype 478 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002480 name: digital organism phenotype 479 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002481 name: digital organism phenotype 480 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002482 name: digital organism phenotype 481 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002483 name: digital organism phenotype 482 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002484 name: digital organism phenotype 483 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002485 name: digital organism phenotype 484 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002486 name: digital organism phenotype 485 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002487 name: digital organism phenotype 486 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002488 name: digital organism phenotype 487 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002489 name: digital organism phenotype 488 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002490 name: digital organism phenotype 489 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002491 name: digital organism phenotype 490 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002492 name: digital organism phenotype 491 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002493 name: digital organism phenotype 492 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002494 name: digital organism phenotype 493 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002495 name: digital organism phenotype 494 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002496 name: digital organism phenotype 495 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002497 name: digital organism phenotype 496 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002498 name: digital organism phenotype 497 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002499 name: digital organism phenotype 498 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002500 name: digital organism phenotype 499 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002501 name: digital organism phenotype 500 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002502 name: digital organism phenotype 501 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002503 name: digital organism phenotype 502 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002504 name: digital organism phenotype 503 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002505 name: digital organism phenotype 504 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002506 name: digital organism phenotype 505 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002507 name: digital organism phenotype 506 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002508 name: digital organism phenotype 507 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002509 name: digital organism phenotype 508 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'and', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002510 name: digital organism phenotype 509 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'and', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002511 name: digital organism phenotype 510 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not-and', 'and', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: ONTOAVIDA:00002512 name: digital organism phenotype 511 def: "The digital phenotype of the logic9 environment that a digital organism computing the logic operations 'not', 'not-and', 'and', 'orn-not', 'or', 'and-not', 'not-or', 'exclusive or' and 'equals' has." [] is_a: ONTOAVIDA:00000151 ! digital phenotype [Term] id: STATO:0000002 name: digital file def: "A digital file is an information content entity which conforms to a specificacion or format and which is meant to hold data and information in digital form, accessible to software agents." [] [Typedef] id: ONTOAVIDA:00000004 name: executes def: "A relation between a digital organism and its transcriptome, in which the instruction codes harbored in its genome are executed to produce the transcriptome. It might depend on the environment (i.e., \"executes at seed\", being seed the integer used for starting the pseudo-random number generator)." [] domain: GSSO:009994 ! digital organism range: ONTOAVIDA:00000124 ! digital transcriptome inverse_of: ONTOAVIDA:00000005 ! is executed by is_asymmetric: true [Typedef] id: ONTOAVIDA:00000005 name: is executed by def: "A relation between a digital organism and its transcriptome, in which the transcriptome results from executing the instruction codes harbored in the genome of the digital organism. It might depend on the environment (i.e., \"is executed by at seed\", being seed the integer used for starting the pseudo-random number generator)." [] domain: ONTOAVIDA:00000124 ! digital transcriptome range: GSSO:009994 ! digital organism is_asymmetric: true [Typedef] id: ONTOAVIDA:00000134 name: has digital phenotype def: "A relation between a digital organism and the digital phenotype encoded by its digital genome. A digital genome can encode different digital phenotypes in distinct computational environments, and therefore, a digital organism can have more than one digital phenotype." [] domain: GSSO:009994 ! digital organism range: ONTOAVIDA:00000151 ! digital phenotype holds_over_chain: RO:0002180 ONTOAVIDA:00001197 is_asymmetric: true [Typedef] id: ONTOAVIDA:00000154 name: mutant of def: "A relation between two digital organisms where their genomes differ in a single instruction code." [] domain: GSSO:009994 ! digital organism range: GSSO:009994 ! digital organism is_symmetric: true [Typedef] id: ONTOAVIDA:00000176 name: is computed by def: "A relation between a digital organism and a logic operation, in which the logic operation is performed when the digital organism executes the instruction codes harbored in its genome. It might depend on the environment (i.e., \"is computed at seed\", being seed the integer used for starting the pseudo-random number generator)." [] domain: ONTOAVIDA:00000111 ! logic operation range: GSSO:009994 ! digital organism inverse_of: ONTOAVIDA:00000182 ! computes is_asymmetric: true [Typedef] id: ONTOAVIDA:00000182 name: computes def: "A relation between a digital organism and a logic operation, in which the digital organism performs the logic operation by executing the instruction codes harbored in its genome. It might depend on the environment (i.e., \"computes at seed\", being seed the integer used for starting the pseudo-random number generator)." [] domain: GSSO:009994 ! digital organism range: ONTOAVIDA:00000111 ! logic operation is_asymmetric: true [Typedef] id: ONTOAVIDA:00001197 name: encodes def: "A relation between the genome and the phenotype of a digital organism, in which the genome contains information that is used to produce the phenotype. It might depend on the environment (i.e., \"encodes at seed\", being seed the integer used for starting the pseudo-random number generator)." [] domain: ONTOAVIDA:00000097 ! digital genome range: ONTOAVIDA:00000151 ! digital phenotype holds_over_chain: ONTOAVIDA:00001198 member inverse_of: ONTOAVIDA:00001199 ! is encoded by is_asymmetric: true [Typedef] id: ONTOAVIDA:00001198 name: encodes seq def: "A relation between the genome and the container storing the phenotypes a digital organism has in different environments (i.e., \"encodes at seed\", being seed the integer used for starting the pseudo-random number generator), in which the genome contains information that is used to produce the phenotype." [] domain: ONTOAVIDA:00000097 ! digital genome range: ONTOAVIDA:00000151 ! digital phenotype is_asymmetric: true [Typedef] id: ONTOAVIDA:00001199 name: is encoded by def: "A relation between the genome and the phenotype of a digital organism, in which the phenotype is produced from the information contained in the genome. It might depend on the environment (i.e., \"is encoded by at seed\", being seed the integer used for starting the pseudo-random number generator)." [] domain: ONTOAVIDA:00000151 ! digital phenotype range: ONTOAVIDA:00000097 ! digital genome is_asymmetric: true [Typedef] id: ONTOAVIDA:00001200 name: involves def: "A relation where p involves c if and only if some process p' is enabled by c', and c' is part of c." [] domain: ONTOAVIDA:00000096 ! avida experiment range: STATO:0000002 ! digital file inverse_of: RO:0002331 ! involved in is_asymmetric: true [Typedef] id: RO:0000056 name: participates in def: "A relation between a continuant and a process, in which the continuant is somehow involved in the process." [] is_asymmetric: true [Typedef] id: RO:0001018 name: contained in def: "A relation where w is 'contained in' p implies that w is part of the structure of p" [] domain: ONTOAVIDA:00000135 ! digital tandem repeat range: ONTOAVIDA:00000124 ! digital transcriptome inverse_of: RO:0001019 ! contains is_asymmetric: true [Typedef] id: RO:0001019 name: contains def: "A relation where w 'contains' p implies that p is part of the structure of w" [] domain: ONTOAVIDA:00000124 ! digital transcriptome range: ONTOAVIDA:00000135 ! digital tandem repeat is_asymmetric: true [Typedef] id: RO:0002180 name: has component def: "A relation where w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type." [] domain: GSSO:009994 ! digital organism range: ONTOAVIDA:00000097 ! digital genome is_asymmetric: true [Typedef] id: RO:0002331 name: involved in def: "A relation where c is involved in p if and only if c enables some process p', and p' is part of p." [] domain: STATO:0000002 ! digital file range: ONTOAVIDA:00000096 ! avida experiment is_a: RO:0000056 ! participates in is_asymmetric: true [Typedef] id: RO:0002353 name: output of def: "A relation where c is output p if c participates in p, c is not present at the beginning of p, and c is not present at the end of p." [] domain: FBcv:0000212 ! paper range: ONTOAVIDA:00000096 ! avida experiment is_a: RO:0000056 ! participates in is_asymmetric: true [Typedef] id: RO:0002443 name: interacts with via parasite-host interaction def: "An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO)." [] subset: ro-eco property_value: IAO:0000117 "Chris Mungall" xsd:string property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/19278549 xsd:anyURI property_value: IAO:0000232 "This relation groups a pair of inverse relations, parasite of and parasitized by" xsd:string is_symmetric: true [Typedef] id: RO:0002444 name: parasite of def: "A relation in which one organism, the parasite, lives off of another organism, the host, harming it and possibly causing death." [] subset: ro-eco synonym: "direct parasite of" EXACT [] property_value: IAO:0000112 "Pediculus humanus capitis parasite of human" xsd:string property_value: IAO:0000117 "Chris Mungall" xsd:string property_value: IAO:0000118 "parasitizes" xsd:string property_value: seeAlso http://eol.org/schema/terms/parasitizes xsd:string domain: ONTOAVIDA:00000018 ! parasite digital organism range: ONTOAVIDA:00000017 ! host digital organism is_a: RO:0002443 ! interacts with via parasite-host interaction inverse_of: RO:0002445 ! parasitized by is_asymmetric: true [Typedef] id: RO:0002445 name: parasitized by def: "A relation in which one organism, the host, harbours another organism, the parasite, being harmed and possibly killed by it." [] subset: ro-eco synonym: "directly parasitized by" EXACT [] property_value: IAO:0000117 "Chris Mungall" xsd:string property_value: IAO:0000118 "has parasite" xsd:string property_value: IAO:0000118 "parasitised by" xsd:string property_value: seeAlso http://eol.org/schema/terms/hasParasite xsd:string domain: ONTOAVIDA:00000017 ! host digital organism range: ONTOAVIDA:00000018 ! parasite digital organism is_a: RO:0002443 ! interacts with via parasite-host interaction is_asymmetric: true [Typedef] id: RO:0002507 name: determined by def: "A relation where s determined by f if and only if s is a type of system, and f is a material entity that is part of s, such that f exerts a strong causal influence on the functioning of s, and the removal of f would cause the collapse of s." [] domain: ONTOAVIDA:00000151 ! digital phenotype range: ONTOAVIDA:00000111 ! logic operation is_asymmetric: true