uberon: Ontology Comparison Report

Files used:

  • file 1 (old): uberon-lastbuild.obo; data version: 2013-02-06
  • file 2 (new): uberon.obo; data version: 2013-02-12

New terms

ID name namespace
UBERON:0013527 pectoral flipper tubercle
UBERON:0013528 Brodmann (1909) area 11
UBERON:0013529 Brodmann area
UBERON:0013531 retrosplenial region
UBERON:0013533 Brodmann (1909) area 2
UBERON:0013535 Brodmann (1909) area 4
UBERON:0013538 Brodmann (1909) area 7
UBERON:0013539 Brodmann (1909) area 8
UBERON:0013540 Brodmann (1909) area 9
UBERON:0013541 Brodmann (1909) area 10
UBERON:0013543 Brodmann (1909) area 12
UBERON:0013544 Brodmann (1909) area 13
UBERON:0013545 Brodmann (1909) area 14
UBERON:0013546 Brodmann (1909) area 15
UBERON:0013547 Brodmann (1909) area 16
UBERON:0013550 Brodmann (1909) area 19
UBERON:0013551 Brodmann (1909) area 20
UBERON:0013552 Brodmann (1909) area 21
UBERON:0013553 Brodmann (1909) area 22
UBERON:0013554 Brodmann (1909) area 23
UBERON:0013556 Brodmann (1909) area 25
UBERON:0013558 Brodmann (1909) area 27
UBERON:0013559 Brodmann (1909) area 28
UBERON:0013560 Brodmann (1909) area 32
UBERON:0013561 Brodmann (1909) area 43
UBERON:0013562 Brodmann (1909) area 8a
UBERON:0013573 Brodmann (1909) area 40
UBERON:0013581 metapodium bone 1
UBERON:0013582 metapodium bone 2
UBERON:0013583 metapodium bone 3
UBERON:0013584 metapodium bone 4
UBERON:0013585 metapodium bone 5
UBERON:0013586 fused metapodial bones 3 and 4
UBERON:0013587 fused metacarpal bones 3 and 4
UBERON:0013588 fused metatarsal bones 3 and 4
UBERON:0013589 koniocortex
UBERON:0013590 cruciate sulcus
UBERON:0013591 postsylvian sulcus
UBERON:0013592 presylvian sulcus
UBERON:0013593 suprasylvian sulcus
UBERON:0013594 ectosylvian sulcus
UBERON:0013595 postlateral sulcus
UBERON:0013596 brain coronal sulcus
UBERON:0013598 accessory nucleus of optic tract
UBERON:0013599 dorsal accessory nucleus of optic tract
UBERON:0013600 lateral accessory nucleus of optic tract
UBERON:0013601 medial accessory nucleus of optic tract
UBERON:0013605 layer of lateral geniculate body
UBERON:0013606 magnocellular layer of dorsal nucleus of lateral geniculate body
UBERON:0013607 parvocellular layer of dorsal nucleus of lateral geniculate body
UBERON:0013608 inferior olive dorsal accessory nucleus
UBERON:0013609 inferior olive medial accessory nucleus
UBERON:0013610 inferior olive ventral accessory nucleus
UBERON:0013612 tooth cingulid
UBERON:0013613 tooth cingulum
UBERON:0013614 fasciculus aberans
UBERON:0013615 koniocellular layer of dorsal nucleus of lateral geniculate body
UBERON:0013616 primary molar tooth
UBERON:0013617 upper primary molar tooth
UBERON:0013618 secondary molar tooth
UBERON:0013619 upper secondary molar tooth
UBERON:0013620 lower primary molar tooth
UBERON:0013621 lower secondary molar tooth
UBERON:0013622 manual autopod pad
UBERON:0013623 pedal autopod pad
UBERON:0013626 medial metatarsal pad
UBERON:0013627 lateral metatarsal pad
UBERON:0013628 pollical pad
UBERON:0013629 hallical pad
UBERON:0013630 short bone
UBERON:0013631 sesamoid element
UBERON:0013632 sesamoid cartilage

Term merges

None

Term changes

KEY: 'A' : added, 'D' : deleted, 'C' : changed (for properties with only one value)

Changes in term-related data
Term ID name alt_id def comment subset synonym xref is_a intersection_of disjoint_from relationship is_obsolete
Term ID name alt_id def comment subset synonym xref is_a intersection_of disjoint_from relationship is_obsolete
UBERON:0000935
anterior commissure		 1 D, 1 A
UBERON:0000993
oviduct		 1 D
UBERON:0001013
adipose tissue
UBERON:0001023
obsolete dendrite		 C C 10 D 1 D A
UBERON:0001024
obsolete neurite		 C C 6 D 1 D A
UBERON:0001025
synapse		 C 9 D 1 D A
UBERON:0001030
obsolete synaptic ribbon		 C D 3 D 2 D 1 D A
UBERON:0001299
glans penis		 1 A
UBERON:0001393
auditory cortex		 3 D, 5 A
UBERON:0001466
pedal digit		 1 A
UBERON:0001479
sesamoid bone		 1 D, 1 A 1 D 1 D, 1 A 2 A 1 D
UBERON:0001570
inferior pharyngeal constrictor		 2 A
UBERON:0001794
inner limiting layer of retina
UBERON:0001888
lateral olfactory tract		 C 1 A
UBERON:0001953
presubiculum		 C C 3 D, 2 A 1 D, 1 A
UBERON:0002098
apex of heart		 C 1 D, 1 A
UBERON:0002102
forelimb		 C 1 A
UBERON:0002245
hemisphere of cerebellum		 1 A
UBERON:0002256
dorsal horn of spinal cord		 1 A
UBERON:0002336
corpus callosum		 1 D, 1 A
UBERON:0002390
hematopoietic system
UBERON:0002423
hepatobiliary system
UBERON:0002436
primary visual cortex		 2 D, 4 A
UBERON:0002465
lymphoid system
UBERON:0002479
dorsal lateral geniculate nucleus		 A
UBERON:0002541
germ ring
UBERON:0002595
orbital sulcus		 A 1 D, 2 A 1 D, 1 A
UBERON:0002687
area X		 C
UBERON:0002688
supramarginal gyrus		 D 1 D, 2 A
UBERON:0002721
lateral sulcus		 1 D, 2 A
UBERON:0002728
entorhinal area		 1 D, 1 A 1 D
UBERON:0002829
dorsal cochlear nucleus		 1 A
UBERON:0002895
secondary olfactory cortex		 4 D, 1 A 2 D
UBERON:0002933
nucleus of anterior commissure		 1 D, 1 A 1 A
UBERON:0003062
primitive knot
UBERON:0003091
thyroid primordium
UBERON:0003467
sesamoid bone of gastrocnemius		 2 D
UBERON:0003631
pedal digit 1		 1 A
UBERON:0003632
pedal digit 2		 1 A
UBERON:0003633
pedal digit 3		 1 A
UBERON:0003634
pedal digit 4		 1 A
UBERON:0003635
pedal digit 5		 1 A
UBERON:0003645
metacarpal bone of digit 1		 1 A
UBERON:0003646
metacarpal bone of digit 2		 1 A
UBERON:0003647
metacarpal bone of digit 3		 1 A
UBERON:0003648
metacarpal bone of digit 4		 1 A
UBERON:0003649
metacarpal bone of digit 5		 1 A
UBERON:0003650
metatarsal bone of digit 1		 1 A
UBERON:0003651
metatarsal bone of digit 2		 1 A
UBERON:0003652
metatarsal bone of digit 3		 1 A
UBERON:0003653
metatarsal bone of digit 4		 1 A
UBERON:0003654
metatarsal bone of digit 5		 1 A
UBERON:0003666
upper jaw molar		 3 D, 3 A 1 D 1 D, 1 A 1 A
UBERON:0003667
lower jaw molar		 2 D, 2 A 1 D 1 D, 1 A 1 A
UBERON:0003889
fallopian tube		 2 D, 4 A
UBERON:0003902
retinal neural layer		 C
UBERON:0003925
photoreceptor inner segment layer		 A 1 A
UBERON:0003926
photoreceptor outer segment layer		 1 A
UBERON:0003961
cingulum of brain		 C 1 A 1 A
UBERON:0004685
middle temporal area		 D 2 D 1 D
UBERON:0004717
Brodmann (1909) area 29		 C C 6 A 1 A 1 D, 1 A
UBERON:0004718
Brodmann (1909) area 26		 C C 6 A 1 A 1 D, 1 A
UBERON:0004728
amphibian larval stage		 1 A
UBERON:0004739
pronephric glomerulus		 C C 1 D, 3 A 1 D, 1 A
UBERON:0004880
chordamesoderm
UBERON:0005798
bicornuate uterus		 1 A
UBERON:0005893
leg bone		 1 A
UBERON:0005970
brain commissure		 1 A
UBERON:0006095
anterior transverse termporal area 41		 1 A 1 D, 8 A 1 A 1 D, 1 A 1 D
UBERON:0006096
posterior transverse termporal area 42		 1 A 1 D, 8 A 1 A 2 D, 1 A 1 D
UBERON:0006099
Brodmann (1909) area 1		 1 A 1 D, 1 A
UBERON:0006100
Brodmann (1909) area 3		 1 A 1 D, 1 A
UBERON:0006101
Brodmann (1909) area 24		 1 D, 2 A 1 D, 1 A
UBERON:0006102
Brodmann (1909) area 35		 1 D, 2 A 1 D, 1 A 1 D
UBERON:0006104
Brodmann (1909) area 36		 1 A 1 D, 1 A 1 D
UBERON:0006378
vibrissa hair		 1 D, 2 A
UBERON:0006471
brodmann (1909) area 5		 1 D, 2 A
UBERON:0006472
brodmann (1909) area 6		 1 D, 2 A
UBERON:0006473
brodmann (1909) area 18		 D 1 D, 3 A
UBERON:0006474
brodmann (1909) area 30		 A 1 D, 3 A
UBERON:0006475
brodmann (1909) area 31		 A 1 D, 3 A 1 A
UBERON:0006476
brodmann (1909) area 33		 A 1 D, 3 A
UBERON:0006477
brodmann (1909) area 34		 A 1 D, 3 A
UBERON:0006478
brodmann (1909) area 37		 A 1 D, 3 A
UBERON:0006479
brodmann (1909) area 38		 1 D, 2 A
UBERON:0006480
brodmann (1909) area 39		 A 1 D, 2 A
UBERON:0006481
brodmann (1909) area 44		 1 D, 2 A
UBERON:0006482
brodmann (1909) area 45		 A 1 D, 3 A
UBERON:0006483
brodmann (1909) area 46		 1 D, 2 A
UBERON:0006484
brodmann (1909) area 47		 A 1 D, 3 A
UBERON:0006485
brodmann (1909) area 48		 A 1 D, 2 A
UBERON:0006486
brodmann (1909) area 52		 1 D, 2 A
UBERON:0006496
external acoustic meatus osseus part		 1 A
UBERON:0006558
lymphatic part of lymphoid system
UBERON:0006685
pharyngeal tubercle		 1 D, 2 A 1 A
UBERON:0007283
presumptive shield		 D
UBERON:0007812
post-anal tail		 1 A
UBERON:0007993
ulnar sesamoid bone		 2 D
UBERON:0007997
sesamoid bone of manus		 1 D, 1 A
UBERON:0008000
sesamoid bone of pes		 1 D, 1 A
UBERON:0008257
radial sesamoid		 1 D
UBERON:0008294
feather barb		 1 A
UBERON:0008295
feather barbule		 1 A
UBERON:0008593
zygomaticus major muscle		 C 1 D 1 A
UBERON:0008594
zygomaticus minor muscle		 C 1 D
UBERON:0008595
levator anguli oris		 1 D, 1 A
UBERON:0008596
mentalis		 2 D, 1 A
UBERON:0008838
metapodial pad		 C A 4 D
UBERON:0008839
palmar pad		 A 1 D, 1 A
UBERON:0008840
plantar pad		 A 1 D, 1 A
UBERON:0008897
fin		 C
UBERON:0010311
scleral sesamoid bone		 1 D
UBERON:0010437
zygomaticus muscle		 C 2 A 1 D, 1 A 2 A
UBERON:0010759
equine distal sesamoid		 2 D
UBERON:0010911
ossicle		 C 1 D, 1 A 1 D
UBERON:0010928
cricopharyngeus muscle		 C A 1 D, 2 A 2 A
UBERON:0010936
thyropharyngeus muscle		 C 1 A 1 A
UBERON:0011581
platypus calcaneus spur		 1 A
UBERON:0011785
ramus of feather barb		 1 A
UBERON:0011786
ramus of feather barbule		 1 A
UBERON:0011984
pedal digit 6		 1 A
UBERON:0012104
sesamoid bone of the peroneus longus muscle		 2 D
UBERON:0012106
baleen plate bristle		 2 A
UBERON:0012127
feather barbicel		 1 A
UBERON:0012137
pedal digit 7		 1 A
UBERON:0012138
pedal digit 8		 1 A
UBERON:0012291
lateral malleolus of fibula		 2 A
UBERON:0012349
digital pad		 A 4 A 1 D, 1 A
UBERON:0012350
carpal pad		 1 D, 1 A
UBERON:0012447
podotheca		 C
UBERON:0013164
molariform tooth		 1 A

File Stats

Term counts for the old and new files
Ontology Old file New file Change
uberon 8275
6724 (81.3%) defined 		8343
6760 (81.0%) defined 		+68
Obsolete 196
(2.3% of total)		 200
(2.3% of total)		 +4 (+2.0%)
Totals 8275
6724 (81.3%) defined
8471 inc. obsoletes 		8343
6760 (81.0%) defined
8543 inc. obsoletes 		+72 (+0.8%)

Ontology report info