Uberon core
Uberon with vertebrate extensions
aggregates AAO from 13:04:2012
aggregates TAO from 09:08:2012
aggregates VSAO from 16:07:2012
http://phenoscape.org/wiki/Ontologies
http://uberon.org#Phenoscape-ext
uberon with extensions
definition
term replaced by
expert consultation and attribution required
BRAND NAME
A historic synonym, no longer encouraged
developmental term
dubious or contested synonym
FORMULA
a synonym made on the basis of a possibly homologous structure in another species
preferred term when talking about an instance of this class in Homo sapiens
indicates that a synonym is used in an inconsistent or confusing way, typically between species
INN
IUPAC NAME
InChI
InChIKey
latin term
plural term
Unique short label for PRO terms for display purposes
Unique short label curated by PSI-MOD
taxonomic disambiguation
SMILES
Abnormal/normal slim
Absent/present slim
Attribute slim
cell_quality
cyclostome structures
classes that are defined by relative position counting from first in a series of elements along an axis in an individual organism rather than by strict homology
developmental_classification
A class which has a weakened disjointness axiom, to avoid inconsistency. These are kept separately in the uberon_disjoint_from_strict ontology.
Disposition slim
Indicates that subclasses in AOs may be inappropriately linked
A class that represents an early developmental structure, like a blastocyst. This part of the ontology is undergoing review to remove inappropriate grouping classes.
derived from the union of EHDAA2 and EMAPA - still to be checked
functional_classification
Aspergillus GO slim
Candida GO slim
Generic GO slim
GOA and proteome slim
Metagenomics GO slim
PIR GO slim
Plant GO slim
Fission yeast GO slim
Yeast GO slim
Prokaryotic GO subset
Subset consisting of classes creating for grouping purposes
High-level terms not to be used for direct annotation
classes that have some inconsistency with FMA
A grouping class that originates in two or more separate anatomical ontologies. Includes 'region of X' type terms
loose concept
somewhat fuzzy grouping for analysis purposes, currently composed of something like: liver, heart, skeletal, kidney, bladder, brain, skin, mouth, esophagus, stomach, small intestine, large intestines, trachea nose, lungs, brain, spinal cord, peripheral nerves, kidneys, ureters, bladder, urethra, gonads
core classes typically found across metazoa. one purpose is to create a rough set of terms that could be used to start a new metazoan AO. Note this subset is not yet fully fleshed out
Catalytic activity terms in need of attention
organs, excluding individual muscles and skeletal elements
A subset specifically created for the 2012 Phenotype RCN meeting. Includes some human-specific terms that may eventually be removed when they are adequately represented with part of relationships in FMA
Relational slim: types of quality that require an additional entity in order to exist
Scalar slim
Systematic synonym
Uberon slim - somewhat arbitrary subset that excludes obscure terms and deep compositional terms
Indicates that the class encompasses classes from other AOs that have not been verified
abstract upper-level terms not directly useful for analysis
Terms in this subset group together terms from different anatomy ontologies that have conflicting upper ontology/CARO assignments. For example, in FMA the naris is immaterial and in ZFA it is an organism subdivision.
Value slim
core classes typically found across vertebrates. one purpose is to create a rough set of terms that could be used to start a new vertebrate AO
Viral overhaul terms
subset_property
synonym_type_property
has_alternative_id
has_broad_synonym
database_cross_reference
has_exact_synonym
has_obo_format_version
has_obo_namespace
has_related_synonym
has_scope
has_synonym_type
treat-xrefs-as-equivalent
treat-xrefs-as-has-subclass
treat-xrefs-as-is_a
treat-xrefs-as-reverse-genus-differentia
true
true
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true
basibranchial element
Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.
Median ventral cartilage or bony element at the ventral point of a branchial arch, behind the tongue[http://www.fishbase.org/Glossary/Glossary.php?q=basibranchial&sc=is].
UBERON:0013746
basibranchial
basibranchials
copula I
uberon
ZFA:0000170
basibranchials
Median ventral cartilage or bony element at the ventral point of a branchial arch, behind the tongue[http://www.fishbase.org/Glossary/Glossary.php?q=basibranchial&sc=is].
http://www.fishbase.org/Glossary/Glossary.php?q=basibranchial&sc=is
ZFA:0000170
basibranchial
Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.
TAO:wd
AAO:0000686
copula I
true
ZFA
scapular blade
Enlarged and broad extension of the scapula distal to the glenoid region that conforms to the contour of the ribs. Origin for the major shoulder muscles including the deltoid group.
In non-tetrapod sarcopterygians the role of the scapula blade is filled by the enlarge cleithrum.
PERSON: Alex Dececchi
lateral line canal
Anatomical space that contains a portion of the lateral line system.
TO DO: think about definitions for spaces in bone, in which pass through nerves, muscles, tendons and are defined by them.
Anatomical space that contains a portion of the lateral line system.
PHENOSCAPE:MAH
ischial cartilage
Paired cartilaginous element forming the posterior portion of the pelvic girdle. [D.F. Markle, BULLETIN OF MARINE SCIENCE. 30(1): 45-53. 1980]
true
paired fin radial
Radial that is part of a paired fin.
true
true
mesopterygium
Relevant for Elasmobranchii, Holocephali and primitive Teleostomi.
The median, elongated basal cartilage of the pectoral fin.
Relevant for Elasmobranchii, Holocephali and primitive Teleostomi.
http://www.briancoad.com/dictionary/DicPics/mesopterygium.htm
pelvic fin distal radial
Melissa Haendel
Pelvic fin radial that develops from the pelvic fin endoskeletal disc. Pelvic fin distal radials are paired.
Placeholder definition, fix me.
pelvic fin basipterygial radial
Melissa Haendel
Pelvic fin radial that is an endochondral fused radials or pterygiophores at the base of the pelvic fin.
Pelvic fin radial that is an endochondral fused radials or pterygiophores at the base of the pelvic fin.
http://www.briancoad.com/dictionary/complete%20dictionary.htm
pelvic fin middle radial
Melissa Haendel
Pelvic fin radial in the middle of the pelvic fin.
placeholder def, fix me.
Brachet's cleft
The visible division between epiblast and hypoblast in the gastrula. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The visible division between epiblast and hypoblast in the gastrula. Kimmel et al, 1995.
ZFIN:curator
Kupffer's vesicle
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kimmel et al, 1995. Kupffer's vesicle has been compared to the mouse embryonic node. Drummond et al, 2005.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period. Kimmel et al, 1995. Kupffer's vesicle has been compared to the mouse embryonic node. Drummond et al, 2005.
ZFIN:curator
obsolete adaxial cell
TO DO: replaced by CL:0007016 not in release of CL yet.
adaxial cells
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000003
adaxial cells
anterior axial hypoblast
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pre-polster
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ZFIN:ZDB-PUB-051019-5
pre-polster
ball
The anterior round region of the yolk cell present after the yolk extension forms during the segmentation period. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
yolk ball
ZFIN:ZDB-PUB-961014-576
yolk ball
The anterior round region of the yolk cell present after the yolk extension forms during the segmentation period. Kimmel et al, 1995.
ZFIN:curator
true
obsolete forerunner cell group
A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kuppfer's vesicle. Cooper and D'Amico, 1996.
DFCs
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal forerunner cells
forerunner cells
incorrectly generalized to teleosts so being obsoleted. 'embryonic structure' and develops_from some 'noninvoluting endocytic marginal cell cluster'
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000023
forerunner cells
TAO:0000023
dorsal forerunner cells
A group of cells that migrate at the leading edge of shield during gastrulation but do not involute. At the end of gastrulation, forerunner cells migrate deep into the embryo and organize to form Kuppfer's vesicle. Cooper and D'Amico, 1996.
ZFIN:curator
DFCs
TAO:0000023
intermediate cell mass of mesoderm
ICM
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
intermediate cell mass of Oellacher
posterior intermediate cell mass
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ICM
TAO:0000033
TAO:0000033
posterior intermediate cell mass
TAO:0000033
intermediate cell mass of Oellacher
median axial vein
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
median fin fold
Surface structure that will develop into one of the median fins. Extends from dorsal surface of fish, caudal to the 8th somite, to the ventral surface ending at the caudal side of the vent.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
median fin
median fin-fold
median fin-folds
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000040
median fin
Surface structure that will develop into one of the median fins. Extends from dorsal surface of fish, caudal to the 8th somite, to the ventral surface ending at the caudal side of the vent.
ZFIN:curator
TAO:0000040
median fin-folds
TAO:0000040
median fin-fold
obsolete muscle pioneer somite 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 1
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000043
muscle pioneers somite 1
myotome somite 14
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
dorsal actinotrichium
Actinotrichium which is part of the dorsal fin fold.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal actinotrichia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000052
dorsal actinotrichia
Actinotrichium which is part of the dorsal fin fold.
TAO:wd
polster
The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pillow
teleost_anatomy_curators
uberon/phenoscape-anatomy
ZFIN:ZDB-PUB-961014-576
pillow
The hatching gland rudiment at the time it underlies the forebrain during the early segmentation period. Kimmel et al, 1995.
ZFIN:curator
true
proneural cluster
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
proneural clusters
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000068
proneural clusters
obsolete sensory axons peripheral
removed axiom: part_of some 'sensory system'.
Seems out of scope for uberon and/or not very useful as a class.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
somite 1
1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 5
5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 26
26
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
ventral actinotrichium
Actinotrichium which is part of the ventral fin fold.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral actinotrichia
TAO:0000078
ventral actinotrichia
Actinotrichium which is part of the ventral fin fold.
TAO:wd
ventral mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
yolk
Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Nutrient store for embryonic development in the form of semicrystalline phospholipoprotein and contained within yolk granules. Kimmel et al, 1995.
ZFIN:curator
YSL
Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
periblast
teleost_anatomy_curators
uberon/phenoscape-anatomy
yolk syncytial layer
Peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm. Kimmel et al, 1995.
ZFIN:curator
ZFIN:ZDB-PUB-961014-576
periblast
ZFIN:ZDB-PUB-961014-576
yolk syncytial layer
actinotrichium
Elastoidin fin ray that is slender, sometimes branched distally and present in the embryonic fin fold. Actinotrichia are translucent and exhibit birefringence.
actinotrichia
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichia are required for lepidotrichium development. They are occasionally retained in adult fishes. Further taxon comments from Witten & Huysseune (2007): "Actinotrichia are found in the embryonic fin fold, along the outer edge of the fin in Actinopterygii, and in the adipose fin in teleosts (Starck 1979; Géraudie and Meunier 1982; Becerra et al. 1983). Only in polypterids has their presence been reported in the joints between adjacent lepidotrichial elements (Géraudie 1988). In the sarcopterygian lineage, actinotrichia are present in coelacanths (Géraudie and Meunier 1980) and in young dipnoans (Arratia et al. 2001)."
PHENOSCAPE:pm
TAO:0000089
actinotrichia
Elastoidin fin ray that is slender, sometimes branched distally and present in the embryonic fin fold. Actinotrichia are translucent and exhibit birefringence.
http://purl.obolibrary.org/obo/uberon/tracker/129
PHENOSCAPE:pm
apical ectodermal ridge dorsal fin
Apical ectodermal ridge that is part of the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Apical ectodermal ridge that is part of the dorsal fin.
ZFIN:curator
obsolete axis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
midline
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000092
midline
obsolete blastomere
A cell arising during cleavage; the term encompasses the partially cleaved, incomplete cells at the blastodisc margin before they collectively form the yolk syncytial layer (YSL) in the midblastula. Kimmel et al, 1995.
Term already present in CL. For the subclasses, see http://purl.obolibrary.org/obo/cl/tracker/18
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
blastomeres
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
A cell arising during cleavage; the term encompasses the partially cleaved, incomplete cells at the blastodisc margin before they collectively form the yolk syncytial layer (YSL) in the midblastula. Kimmel et al, 1995.
ZFIN:curator
TAO:0000093
blastomeres
cardinal system
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
proliferative region
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cell cycle
cell division
proliferation
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000098
cell cycle
TAO:0000098
cell division
TAO:0000098
proliferation
dorsal fin fold
Region of the median fin fold that develops into the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
Region of the median fin fold that develops into the dorsal fin.
ZFIN:curator
TAO:0000102
dorsal fin-fold
supramaxilla
Dermal bone that is located on the dorsal margin of the maxilla, usually at the dorso-posterior region of maxilla. The supramaxilla is a paired bone.
The supramaxilla may be present as one or two bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is located on the dorsal margin of the maxilla, usually at the dorso-posterior region of maxilla. The supramaxilla is a paired bone.
TAO:ga_tg
suprapreopercle
Dermal bone that is located dorsal to the preopercle or lies on the antero-dorsal corner of the opercle, and encloses the upper section of the preopercular canal. The suprapreopercle is paired.
Synonyms:
supraopercle (Roberts 1969)
supraopercular bone (Buckup 1998)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
supraopercle
supraopercular bone
suprapreopercles
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000104
supraopercular bone
Dermal bone that is located dorsal to the preopercle or lies on the antero-dorsal corner of the opercle, and encloses the upper section of the preopercular canal. The suprapreopercle is paired.
TAO:GA_TG
TAO:0000104
suprapreopercles
TAO:0000104
supraopercle
extension
The posterior elongated region of the yolk cell that forms during the segmentation period. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
yolk extension
true
ZFIN:ZDB-PUB-961014-576
yolk extension
The posterior elongated region of the yolk cell that forms during the segmentation period. Kimmel et al, 1995.
ZFIN:curator
macula lagena
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
mandibular lateral line neuromast
Neuromast that is part of the mandibular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neuromast mandibular
neuromasts mandibular
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neuromast that is part of the mandibular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
TAO:0000125
neuromasts mandibular
TAO:0000125
neuromast mandibular
antorbital
Dermal bone positioned as the first bone of the infraorbital series. The antorbital articulates with the lacrimal or infraorbital 1 anteroventrally and the supraorbital posterodorsally. The antorbital is a paired bone.
The antorbital in some teleosts fuses with the lacrimal. The antorbital contains the end branch of the infraorbital canal or neuromasts for the infraorbital canal in basal teleosts such as elopiformes, some osteoglossomorphs and fossil basal teleosts.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
adnasal
lateral rostral
perorbital
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:Bridge_1877
perorbital
true
TAO:Jollie_1984
lateral rostral
Dermal bone positioned as the first bone of the infraorbital series. The antorbital articulates with the lacrimal or infraorbital 1 anteroventrally and the supraorbital posterodorsally. The antorbital is a paired bone.
TAO:GA_TG
TAO:Goodrich_1930
TAO:Regan_1923
adnasal
otic lateral line neuromast
Neuromast that is part of the otic lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neuromast otic
neuromasts otic
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000136
neuromast otic
Neuromast that is part of the otic lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
TAO:0000136
neuromasts otic
immature otolith
Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for otolith by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
immature otoliths
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
Brightly refractile stone-like organ within the otic vesicle and positioned over a sensory macula; two form in each vesicle during the late segmentation period. Kimmel et al, 1995. (Also see Anatomical Atlas entry for otolith by T. Whitfield.)
ZFIN:curator
TAO:0000139
immature otoliths
presumptive epidermis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
somite 20
20
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 30
30
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
ventral mesenchyme
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
inferior lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
inferior lobes
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000165
inferior lobes
true
obsolete anal fin skeleton
Median fin skeleton that is located posterior to the anus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000166
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Median fin skeleton that is located posterior to the anus.
TAO:wd
anterior macula
Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
am
sensory patch
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000168
sensory patch
true
Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)
ZFIN:curator
true
TAO:0000168
am
interhyal bone
It articulates ventrally with the posterior end of the posterior ceratohyal.
Replacement bone that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
stylohyal
teleost_anatomy_curators
uberon/phenoscape-anatomy
Replacement bone that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.
TAO:wd
TAO:0000171
stylohyal
caudal cerebellar tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior lateral line nerve
Cranial nerve which enters the brain between cranial nerves VIII and IX; contains afferents and sensory efferents to the posterior lateral line ganglion and middle ganglion. Fibers from the posterior lateral line ganglion innervate the occipital dorsal lateral line and trunk lateral lines.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal lateral line nerve
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000175
caudal lateral line nerve
Cranial nerve which enters the brain between cranial nerves VIII and IX; contains afferents and sensory efferents to the posterior lateral line ganglion and middle ganglion. Fibers from the posterior lateral line ganglion innervate the occipital dorsal lateral line and trunk lateral lines.
ZFIN:curator
lateral entopeduncular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
caudal oblique
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal peduncle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal zone of D
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior zone of dorsal telencephalic area
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000181
posterior zone of dorsal telencephalic area
central caudal thalamic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
central posterior thalamic nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000182
central posterior thalamic nucleus
central pretectum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
commissura rostral, pars ventralis
Part of the anterior commissure which abuts the preoptic region dorsally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ISBN:3764351209
Part of the anterior commissure which abuts the preoptic region dorsally.
true
lateral granular eminence
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
corpus cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cerebellar corpus
corpus cerebellum
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000188
cerebellar corpus
TAO:0000188
corpus cerebellum
diffuse nuclei
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsal accessory optic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsal depressor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal hypohyal bone
Replacement bone that is bilaterally paired and articulates with the anterior ceratohyal posteriorly and the ventral hypohyal bone ventrally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal hypohyals
dorsohyal
teleost_anatomy_curators
uberon/phenoscape-anatomy
upper hypohyal
TAO:0000196
dorsal hypohyals
TAO:0000196
dorsohyal
TAO:0000196
upper hypohyal
Replacement bone that is bilaterally paired and articulates with the anterior ceratohyal posteriorly and the ventral hypohyal bone ventrally.
ZFIN:curator
true
obsolete dorsal nucleus
removed axiom: part_of some habenula.
Obsoleted because this term refererences a teleost specific region of the habenula, that has a homology relationship with a different portion of the habenula in mammals - that is currently not represented in Uberon. Can reinstate upon further classification of habenular structures.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
dorsal periventricular hypothalamus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsal transverse
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
transversus dorsalis
uberon/phenoscape-anatomy
TAO:0000201
transversus dorsalis
efferent branchial artery
EBA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
EBA
TAO:0000202
true
true
rhinosphenoid
An endochondral bone which is located anterior to the orbitosphenoid and medial to the paired lateral ethmoid. Rhinosphenoid is a median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
An endochondral bone which is located anterior to the orbitosphenoid and medial to the paired lateral ethmoid. Rhinosphenoid is a median bone.
TAO:wd
true
external ventral flexor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lateral preglomerular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
gigantocellular part of magnocellular preoptic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
gill lamella
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gill lamellae
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000211
gill lamellae
true
true
granular eminence
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
hypobranchial vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypobranchial vessels
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000214
hypobranchial vessels
infracarinalis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
internal levator
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
isthmic primary nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
infraorbital 1
Infraorbital that is the first (anteriormost) bone of the infraorbital series.
Suborbital and infraorbital 1 are synonymized by some authors (e.g., Cuvier), however, a suborbital bone in fishes has a different meaning than an infraorbital 1; it is a bone(s) that it is placed between the postero-dorsal infraorbitals and preopercle. A suborbital (also named postorbital by some authors) is not present in extant teleosts with the exception of Arapaima where it is occasionally present. Suborbital bones are found in some fossil basal teleosts. [G. Arratia]
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lachrymal bone
lacrimal bone
lacrymal bone
suborbital
teleost_anatomy_curators
uberon/phenoscape-anatomy
lachrymal
lacrymal
TAO:0000223
lacrymal bone
PSPUB:0000164
lacrymal
TAO:0000223
lachrymal bone
Infraorbital that is the first (anteriormost) bone of the infraorbital series.
ZFIN:curator
PSPUB:0000119
lachrymal
TAO:0000223
lacrimal bone
TAO:0000223
suborbital
quadrate ventral process
Process that is the ventral, posteriorly-oriented bony extension of the quadrate.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
Process that is the ventral, posteriorly-oriented bony extension of the quadrate.
TAO:wd
lateral crista primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral crista primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000225
lateral crista primordia
lateral ethmoid
Endochondral bone that separates the olfactory region from the orbit, extends medially to meet its fellow medially below the frontal bones and is bordered by the mesethmoid anteriorly. It may articulate with the autopalatine and infraorbital 1 laterally. The lateral ethmoid is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral ethmoids
teleost_anatomy_curators
uberon/phenoscape-anatomy
parethmoïde
pleurethmoïde
éthmoïde latéral
true
TAO:0000226
lateral ethmoids
PSPUB:0000164
éthmoïde latéral
PSPUB:0000134
pleurethmoïde
PSPUB:0000141
parethmoïde
true
Endochondral bone that separates the olfactory region from the orbit, extends medially to meet its fellow medially below the frontal bones and is bordered by the mesethmoid anteriorly. It may articulate with the autopalatine and infraorbital 1 laterally. The lateral ethmoid is paired.
ZFIN:curator
lateral line primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral line primordia
llp
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000228
llp
TAO:0000228
lateral line primordia
true
longitudinal hypochordal
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lateral semicircular canal primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral semicircular canal primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000232
lateral semicircular canal primordia
true
lower oral valve
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
macula neglecta
Macula positioned on the floor of the utricle adjacent to the utriculosaccular foramen at the base of the common crus.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Macula positioned on the floor of the utricle adjacent to the utriculosaccular foramen at the base of the common crus.
ZFA:0000234
magnocellular superficial pretectal nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
medial forebrain bundle diencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
medial olfactory tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
mesocoracoid bone
Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Meoscoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesocoracoideum
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000239
mesocoracoideum
Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Meoscoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired.
TAO:wd
true
metapterygoid
Endochondral bone that forms the posteriormost element of the palatal complex. It overlies the quadrate and symplectic, posteriorly it articulates with the hyomandibula and anteriorly with the entopterygoid and ectopterygoid. It curves dorsally to form the posteroventral surface of the orbit. The metapterygoid is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
metapterygoids
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000240
metapterygoids
Endochondral bone that forms the posteriormost element of the palatal complex. It overlies the quadrate and symplectic, posteriorly it articulates with the hyomandibula and anteriorly with the entopterygoid and ectopterygoid. It curves dorsally to form the posteroventral surface of the orbit. The metapterygoid is paired.
ZFIN:curator
midline column
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
nucleus of the descending root
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
nucleus taeniae
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
magnocellular preoptic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
opercle
Dermal bone that forms the postero-dorsal part of the opercular series. The opercle articulates with the hyomandibula antero-dorsally and with the subopercle ventrally. The opercle is a paired bone.
The opercle is usually a large, flat bone that may be partially covered by the posterior region of the preopercle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
opercles
operculare
operculum
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000250
operculum
TAO:0000250
opercles
Dermal bone that forms the postero-dorsal part of the opercular series. The opercle articulates with the hyomandibula antero-dorsally and with the subopercle ventrally. The opercle is a paired bone.
TAO:GA_TG
TAO:0000250
operculare
adipose fin
A fin that is fleshy, lacks supporting rays, and is located posterior to the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
A fin that is fleshy, lacks supporting rays, and is located posterior to the dorsal fin.
TAO:wd
pars subcommissuralis of V
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
mandibular lateral line
One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
true
pharyngohyoid
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
preopercle
Dermal bone that is part of the opercular series and bears the preopercular sensory canal. The preopercle is a paired bone and typically L-shaped, with the horizontal limb overlying the interopercle and the vertical limb overlying the opercle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
preopercles
preoperculum
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is part of the opercular series and bears the preopercular sensory canal. The preopercle is a paired bone and typically L-shaped, with the horizontal limb overlying the interopercle and the vertical limb overlying the opercle.
TAO:wd
TAO:0000264
preoperculum
TAO:0000264
preopercles
presumptive dorsal mesoderm
Portion of presumptive mesoderm fated to become dorsal mesoderm.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of presumptive mesoderm fated to become dorsal mesoderm.
ZFA:0000265
pretecto-mamillary tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pretectomamillary tract
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000266
pretectomamillary tract
primary olfactory fiber layer
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
anal fin proximal radial
Rod-like internal median skeletal support bones of the anal fin, which articulate with the distal radials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basal radial of anal fin
proximal anal-fin radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000268
proximal anal-fin radial
Rod-like internal median skeletal support bones of the anal fin, which articulate with the distal radials.
ZFIN:curator
TAO:0000268
basal radial of anal fin
inferior ventral flexor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
radial
Radials are the internal skeletal supports of the median and paired fins.
Radials may be cartilaginous or bony; always present at the base of fins; typically support lepidotrichia.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
actinost
radials
teleost_anatomy_curators
uberon/phenoscape-anatomy
Radials are the internal skeletal supports of the median and paired fins.
TAO:wd
TAO:0000271
actinost
TAO:0000271
radials
rostral octaval nerve sensory nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
rostrolateral thalamic nucleus of Butler & Saidel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
secondary gustatory nucleus medulla oblongata
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
medial division
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
hair cell posterior macula
Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sensory hair cells posterior macula
teleost_anatomy_curators
uberon/phenoscape-anatomy
Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)
ZFIN:curator
TAO:0000281
sensory hair cells posterior macula
obsolete sternohyoid
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
subopercle
Dermal bone that is part of the opercular series, lying below the opercle. The subopercle is paired and is typically a thin bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
subopercles
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is part of the opercular series, lying below the opercle. The subopercle is paired and is typically a thin bone.
TAO:wd
TAO:0000284
subopercles
superficial adductor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
superficial lateralis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
superior dorsal flexor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
supracarinalis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
preopercle horizontal limb
A dermal bone that is the lower, horizontal portion of the preopercle bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
preopercle horizontal arm
preopercle lower limb
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000289
preopercle lower limb
A dermal bone that is the lower, horizontal portion of the preopercle bone.
TAO:wd
TAO:0000289
preopercle horizontal arm
medial octavolateralis nucleus
Lateral line sensory nucleus located in the cerebellum that processes sensory input from the lateral line.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lateral line sensory nucleus located in the cerebellum that processes sensory input from the lateral line.
ZFA:0000291
synencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
torus lateralis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
uncrossed tecto-bulbar tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vagal lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
motor nucleus X
nX
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000297
nX
TAO:0000297
motor nucleus X
vent
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral entopeduncular nucleus V
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral hypohyal bone
Replacement bone that is bilaterally paired and articulates with the ceratohyal bone posteriorly and the dorsal hypohyal bone dorsally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lower hypohyal
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral hypohyals
ventrohyal
TAO:0000300
ventral hypohyals
Replacement bone that is bilaterally paired and articulates with the ceratohyal bone posteriorly and the dorsal hypohyal bone dorsally.
ZFIN:curator
true
TAO:0000300
lower hypohyal
TAO:0000300
ventrohyal
obsolete ventral nucleus
removed axiom: part_of some habenula.
Obsoleted because this term refererences a teleost specific region of the habenula, that has a homology relationship with a different portion of the habenula in mammals - that is currently not represented in Uberon. Can reinstate upon further classification of habenular structures.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
ventral sulcus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vestibulolateralis lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
E-YSL
The portion of the YSL that is outside of the blastoderm margin during epiboly. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
external yolk syncytial layer
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ZFIN:ZDB-PUB-961014-576
external yolk syncytial layer
The portion of the YSL that is outside of the blastoderm margin during epiboly. Kimmel et al, 1995.
ZFIN:curator
adductor mandibulae complex
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
anal inclinator
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
asteriscus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lagenar otolith
lagenolith
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000315
lagenar otolith
TAO:0000315
lagenolith
brainstem and spinal white matter
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
brain stem/spinal tracts and commissures
teleost_anatomy_curators
uberon/phenoscape-anatomy
CNS white matter that is part of the brain stem or spinal cord[ZFIN].
TAO:0000318
brain stem/spinal tracts and commissures
branchiostegal membrane
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
caudal levator
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal octaval nerve sensory nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal periventricular hypothalamus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
commissure infima of Haller
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
crossed tecto-bulbar tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
preopercle vertical limb
A dermal bone that is the upper, vertical portion of the preopercle bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ascending arm of preopercle
preopercle upper limb
preopercle vertical arm
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000336
preopercle vertical arm
TAO:0000336
ascending arm of preopercle
A dermal bone that is the upper, vertical portion of the preopercle bone.
TAO:wd
TAO:0000336
preopercle upper limb
basioccipital posterodorsal region
Endochondral bone which is the posterodorsal region of the basioccipital bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Endochondral bone which is the posterodorsal region of the basioccipital bone.
TAO:wd
dorsal entopeduncular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal flexor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal inclinator
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal nucleus of V
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal zone of median tuberal portion of hypothalamus
teleost_anatomy_curators
uberon/phenoscape-anatomy
exoccipital posteroventral region
Endochondral bone which is the posterodorsal region of the basioccipital bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Endochondral bone which is the posterodorsal region of the basioccipital bone.
TAO:wd
epaxialis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
epipleural
Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epipleurals
teleost_anatomy_curators
uberon/phenoscape-anatomy
pleuroïde
épipleural
épipleure
TAO:0000350
epipleurals
PSPUB:0000153
pleuroïde
PSPUB:0000164
épipleural
Epipleurals lie below the horizontal septum and are posteroventrally directed. There are ossified epipleurals in certain ostariophysans. In many lower elopocephalan teleosts including ostariophysans the epipleural bones develop an anterodorsal branch so that they are forked proximally.
ZFIN:curator
PSPUB:0000133
épipleure
external cellular layer
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
gill raker
Dermal bone that is a projection present on the inner surface of a branchial arch.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gill rakers
gill-raker
gillraker
teleost_anatomy_curators
uberon/phenoscape-anatomy
branchiocténie
branchiospine
TAO:0000356
gill-raker
PSPUB:0000164
branchiospine
Dermal bone that is a projection present on the inner surface of a branchial arch.
ZFIN:curator
TAO:0000356
gill rakers
PSPUB:0000133
branchiocténie
TAO:0000356
gillraker
granular layer corpus cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
hypaxialis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
hypobranchial bone
Replacement bone that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Replacement bone that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial cartilage or bone.
ZFIN:curator
hypural
Laterally flattened haemal spine of an ural vertebra that lacks its arch and supports a few principal caudal lepidotrichia distally. A hypural may articulate or fuse with its ural centrum proximally or may lie ventral to the notochord. A hypural is an unpaired median bone that ossifies perichondrally. (Modified from Monod, 1968 and Arratia and Schultze, 1992).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hyp
hypuralia
hypurals
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000364
hypuralia
TAO:0000364
hypurals
TAO:0000364
hyp
true
Laterally flattened haemal spine of an ural vertebra that lacks its arch and supports a few principal caudal lepidotrichia distally. A hypural may articulate or fuse with its ural centrum proximally or may lie ventral to the notochord. A hypural is an unpaired median bone that ossifies perichondrally. (Modified from Monod, 1968 and Arratia and Schultze, 1992).
TAO:GA_TG
ZFIN:curator
internal pharyngoclavicularis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
interpeduncular nucleus medulla oblongata
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsal fin actinotrichium
Actinotrichium that is part of the dorsal fin skeleton.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichium that is part of the dorsal fin skeleton.
TAO:wd
true
anal fin actinotrichium
Actinotrichium that is part of the anal fin skeleton.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichium that is part of the anal fin skeleton.
TAO:wd
infraorbital
Dermal bone that is located anterior, ventral or posterior to the eye. Infraorbital bones may or may not contain the infraorbital sensory canal. Infraorbital bones are numbered starting with the anteriormost element of the series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000489
circumorbital series
circumorbitals
infraorbital series
infraorbitals
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000376
infraorbital series
TAO:0000376
circumorbitals
TAO:0000376
circumorbital series
TAO:0000376
infraorbitals
true
Dermal bone that is located anterior, ventral or posterior to the eye. Infraorbital bones may or may not contain the infraorbital sensory canal. Infraorbital bones are numbered starting with the anteriormost element of the series.
ZFIN:curator
lateral forebrain bundle diencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lateral line sensory nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
levator arcus palatini
Jaw muscle that connects the sphenotic to the metapterygoid and hyomandibula and promotes the elevation/abduction of the suspensorium.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Jaw muscle that connects the sphenotic to the metapterygoid and hyomandibula and promotes the elevation/abduction of the suspensorium.
PMID:18307809
obsolete nucleus motorius of nervi vagi
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
medial caudal lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
medial funicular nucleus medulla oblongata
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
medial preglomerular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
medial zone of D
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
median tuberal portion
Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain.
teleost_anatomy_curators
uberon/phenoscape-anatomy
ISBN:3764351209
Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain.
molecular layer corpus cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete muscle pioneer somite 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 2
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000395
muscle pioneers somite 2
nucleus subglomerulosis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
nucleus isthmi
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
secondary gustatory nucleus trigeminal nuclei
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
octaval nerve sensory nucleus
TO DO: see DOI: 10.1002/cne.902660403 for next steps in defining different octaval nerve nuclei.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
paracommissural nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
parvocellular superficial pretectal nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
periventricular nucleus of caudal tuberculum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
postcleithrum
Commonly, the postcleithra form a bilateral series including one to three flat, thin postcleithra of variable shapes (in teleosts). Basal teleosts may have a series up to seven postcleithra (see Arratia 1984 and 1997 and references herein).
Dermal bone placed postero-medially to the supracleithrum and/or cleithrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
postclavicle
postcleithra
teleost_anatomy_curators
uberon/phenoscape-anatomy
métacleithrum
métaclithrum
paraclithrum
postcleithrum
PSPUB:0000131
métaclithrum
Dermal bone placed postero-medially to the supracleithrum and/or cleithrum.
TAO:GA_TG
TAO:wd
TAO:0000410
postclavicle
true
PSPUB:0000131
métacleithrum
PSPUB:0000143
paraclithrum
PSPUB:0000164
postcleithrum
TAO:0000410
postcleithra
posterior crista primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior crista primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000411
posterior crista primordia
true
posterior semicircular canal primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior semicircular canal primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
TAO:0000412
posterior semicircular canal primordia
presumptive cephalic mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pterosphenoid
Endochondral bone that sutures with the orbitosphenoid anteriorly, the frontal bone dorsally and the sphenotic and prootic posteriorly. The pterosphenoid forms part of the orbitosphenoid region. The pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves. The pterosphenoid is a paired bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
alisphenoid
pterosphenoids
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000419
pterosphenoids
true
true
Endochondral bone that sutures with the orbitosphenoid anteriorly, the frontal bone dorsally and the sphenotic and prootic posteriorly. The pterosphenoid forms part of the orbitosphenoid region. The pterosphenoid bears foramina that accommodate branches of the trigeminal and facial nerves. The pterosphenoid is a paired bone.
ZFIN:curator
TAO:0000419
alisphenoid
retroarticular
The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The retroarticular is a cartilage bone that forms at the posteroventral tip of Meckel's cartilage where the interoperculomandibular ligament attaches (5.1 mm NL). In the adult it is basically triangular in shape. The retroarticular is ligamentously connected to the interopercle and preopercle posteriorly and abuts the ventral shelf of the dentary anteriorly.
ZFIN:curator
true
opercular lateral line
One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
anterior lateral line nerve
Cranial nerve which enters the brain between cranial nerves VI and VII; contains afferents and sensory efferents to the anterior lateral line ganglia.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral lateral line nerve
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cranial nerve which enters the brain between cranial nerves VI and VII; contains afferents and sensory efferents to the anterior lateral line ganglia.
ZFIN:curator
TAO:0000425
rostral lateral line nerve
rostral parvocellular preoptic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
scaphium
Neural arch and Weberian ossicle that is reduced in size relative to other neural arches. Scaphium has a process which articulates with the first centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Weberian ossicle 2
second Weberian ossicle
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Neural arch and Weberian ossicle that is reduced in size relative to other neural arches. Scaphium has a process which articulates with the first centrum.
ZFIN:curator
true
TAO:0000429
Weberian ossicle 2
TAO:0000429
second Weberian ossicle
secondary gustatory tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
caudal fin actinotrichium
Actinotrichium that is part of the caudal fin skeleton.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichium that is part of the caudal fin skeleton.
TAO:wd
parhypural
Haemal spine of last hemal arch that is pierced by the haemal canal through which the caudal vessels pass or haemal arch of preural centrum 1. Its distal part commonly supports lepidotrichia. The parhypural is an unpaired median haemal spine.
The parhypural is frequently confused with the arch plus spine of preural centrum 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000562
hemal spine of preural centrum 1
parahypural
parhyural
phy
teleost_anatomy_curators
uberon/phenoscape-anatomy
parhypural
parhypural hypaxonal
prohypural
PSPUB:0000164
parhypural
PSPUB:0000133
parhypural hypaxonal
TAO:0000438
parhyural
TAO:0000438
phy
true
TAO:0000438
hemal spine of preural centrum 1
PSPUB:0000143
prohypural
Haemal spine of last hemal arch that is pierced by the haemal canal through which the caudal vessels pass or haemal arch of preural centrum 1. Its distal part commonly supports lepidotrichia. The parhypural is an unpaired median haemal spine.
TAO:GA_TG
TAO:0000438
parahypural
superficial pelvic abductor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
superior raphe nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior raphe nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000440
anterior raphe nucleus
supraneural bone
Endochondral bone that is median and located in the dorsal skeletogenous septum between the cranium and the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
predorsal
predorsal bone
sn
supraneurals
teleost_anatomy_curators
uberon/phenoscape-anatomy
axonoste libre
pseudaxonoste
supraneural
PSPUB:0000164
axonoste libre
TAO:0000442
predorsal bone
PSPUB:0000164
supraneural
TAO:0000442
predorsal
TAO:0000442
sn
Endochondral bone that is median and located in the dorsal skeletogenous septum between the cranium and the dorsal fin.
ZFIN:curator
true
PSPUB:0000156
pseudaxonoste
TAO:0000442
supraneurals
tertiary gustatory nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
torus longitudinalis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
upper oral valve
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
urohyal
Tendon bone that forms in the tendon of the sternohyoid muscles ventral to the anterior end of copula 1. The urohyal associates by ligaments to the ventral hypohyals or it articulates with the ventral hypohyals. The urohyal is an unpaired bone.
The urohyal forms as a single ossification in most teleosts, or as a paired ossification.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
parurohyal
teleost_anatomy_curators
uberon/phenoscape-anatomy
clidoste
interclaviculaire
jugulaire
urohyal
PSPUB:0000164
urohyal
PSPUB:0000143
interclaviculaire
PSPUB:0000109
jugulaire
TAO:Arratia_Schultze_1990
parurohyal
TAO:GA_TG
TAO:wd
Tendon bone that forms in the tendon of the sternohyoid muscles ventral to the anterior end of copula 1. The urohyal associates by ligaments to the ventral hypohyals or it articulates with the ventral hypohyals. The urohyal is an unpaired bone.
PSPUB:0000140
clidoste
ventral accessory optic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ventral flexor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral nucleus of V
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventromedial thalamic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
adipose fin actinotrichium
Actinotrichium that is part of the adipose fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichium that is part of the adipose fin.
TAO:wd
Weberian ossicle
Bone that is an element associated with a Weberian vertebra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Weberian ossicles
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bone that is an element associated with a Weberian vertebra.
ZFIN:curator
TAO:0000461
Weberian ossicles
true
abductor hyohyoid
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete adductor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
false
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
otic lateral line
One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
adductor operculi
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal depressor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anterior crista primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior crista primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000468
anterior crista primordia
anterior semicircular canal primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior semicircular canal primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000469
anterior semicircular canal primordia
true
intercalar
Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
opisthotic
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.
ZFIN:curator
true
TAO:0000474
opisthotic
paraventricular organ
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
branchiostegal ray
Although the branchiostegals are articulated or attached to the hyoid arch, they belong to the opercular series. Branchiostegal rays are of variable shape and number and their homology is problematic. Usually they are numbered from anterior to posterior elements, instead from posterior to anteriorly considering that the last element of the series is consistently associated to the subopercle. For a survey of branchiostegal rays see Mc Allister (1968).
Dermal bone that is a flattened element that supports the branchiostegal membrane. Branchiostegal rays are generally present in a series articulating ventrally or ventro-medially with the anterior and posterior ceratobranchials whereas the most posterior ray articulates with the subopercle. The branchiostegal ray is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchiostegal rays
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000476
branchiostegal rays
Dermal bone that is a flattened element that supports the branchiostegal membrane. Branchiostegal rays are generally present in a series articulating ventrally or ventro-medially with the anterior and posterior ceratobranchials whereas the most posterior ray articulates with the subopercle. The branchiostegal ray is paired.
ZFIN:curator
caudal mesencephalo-cerebellar tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
caudal octavolateralis nucleus
Hindbrain nucleus which is part of the medulla oblongata and is a mechanoreceptive area along with the medial octavolateralis nucleus. It is smaller than the medial octavolateralis nucleus and is located lateral to the facial and vagal lobes of the medulla oblongata. From Neuroanatomy of the Zebrafish Brain.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hindbrain nucleus which is part of the medulla oblongata and is a mechanoreceptive area along with the medial octavolateralis nucleus. It is smaller than the medial octavolateralis nucleus and is located lateral to the facial and vagal lobes of the medulla oblongata. From Neuroanatomy of the Zebrafish Brain.
ISBN:3764351209
caudal preglomerular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal tuberal nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior tuberal nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000482
posterior tuberal nucleus
celiacomesenteric artery
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
central nucleus inferior lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
central nucleus inferior lobes
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000485
central nucleus inferior lobes
central zone of D
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ceratobranchial bone
Endochondral bone that is bilaterally paired and forms part of the ventral branchial arches.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ceratobranchials
teleost_anatomy_curators
uberon/phenoscape-anatomy
Endochondral bone that is bilaterally paired and forms part of the ventral branchial arches.
ZFIN:curator
TAO:0000488
ceratobranchials
commissure of the caudal tuberculum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
coracoradialis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
decussation of medial funicular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
infraorbital 5
Infraorbital that is the fifth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dermosphenotic
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the fifth bone of the infraorbital series.
ZFIN:curator
TAO:0000495
dermosphenotic
pelvic adductor profundus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dilator operculi
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal arrector
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsal erector
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal motor nucleus trigeminal nerve
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
motor nucleus V
nV
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000502
motor nucleus V
TAO:0000502
nV
dorsal oblique branchial muscle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal oblique branchial muscles
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000503
dorsal oblique branchial muscles
dorsal retractor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal zone of D
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural
Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g., Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Some or all epineural bones ossify free from the neural arches in most teleosts. In some lower teleosts, e.g., Leptolepis, Hiodon, elopiforms and albuliforms, ossification proceeds from the attachment point of the ligament to the arch, and the epineural is a process of the neural arch. In many lower teleosts epineurals are forked proximally.
ZFIN:curator
pelvic fin radial
Pelvic fin radials are internal skeletal supports of the pelvic fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pelvic actinost
pelvic radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pelvic fin radials are internal skeletal supports of the pelvic fin.
TAO:wd
TAO:0000508
pelvic actinost
true
TAO:0000508
pelvic radial
external levatores
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
facial lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
fast muscle cell somite 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 1
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000513
fast muscle cells somite 1
periventricular grey zone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
glossopharyngeal lobe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
horizontal commissure
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
inferior hyohyoid
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
inferior reticular formation
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
intercalarium
Neural arch and Weberian ossicle that has been modified in shape relative to other neural arches. Intercalarium includes three parts: an anterolateral process (the manubrium) which is embedded in the interossicular ligament and the ascending and articulating processes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Weberian ossicle 3
teleost_anatomy_curators
third Weberian ossicle
uberon/phenoscape-anatomy
TAO:0000525
Weberian ossicle 3
TAO:0000525
third Weberian ossicle
Neural arch and Weberian ossicle that has been modified in shape relative to other neural arches. Intercalarium includes three parts: an anterolateral process (the manubrium) which is embedded in the interossicular ligament and the ascending and articulating processes.
ZFIN:curator
true
true
intermuscular bone
Axial bone which is a segmental ossification that forms in the myoseptum.
Intermuscular bones are found in teleosts fishes only.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
métamyoste
métaxymyoste
os intermusculaire
PSPUB:0000153
métaxymyoste
PSPUB:0000164
os intermusculaire
true
Axial bone which is a segmental ossification that forms in the myoseptum.
ZFIN:curator
PSPUB:0000147
métamyoste
pharyngobranchial bone
Endochondral bone of the branchial arches located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial
pharyngobranchials
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000527
pharyngobranchials
Endochondral bone of the branchial arches located medial to the epibranchials.
ZFIN:curator
TAO:0000527
infrapharyngobranchial
interradialis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lapillus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
utricular otolith
utriculith
TAO:0000530
utriculith
TAO:0000530
utricular otolith
lateral division
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
lateral longitudinal fasciculus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000198
lateral longitundinal fasciculus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000534
lateral longitundinal fasciculus
true
true
lateral zone of D
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
magnocellular octaval nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete marginal blastomere
Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ZFA:0000541
marginal blastomeres
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000541
marginal blastomeres
Cells (incompletely cleaved before the YSL forms), located at the surface just at the rim of the blastodisc, external to the deep blastomeres. Kimmel et al, 1995.
ZFIN:curator
medial column
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
pectoral fin actinotrichium
Actinotrichium that is part of the pectoral fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichium that is part of the pectoral fin.
TAO:wd
true
posttemporal
Dermal bone of the secondary pectoral girdle that attaches the girdle to the skull. Its dorsal process attaches to the epiotic or epioccipital, the ventral process to the intercalar and the body articulates with the supracleithrum. The postotic sensory canal or lateral line runs within or lateral to bone.
The posttemporal is commonly a Y-shaped bone with two elongate processes. The dorsal process may be equal or longer than the ventral process or the opposite. The ventral process may be absent in some teleosts.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
post-temporal
postemporal
posttemporale
suprascapula
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000549
post-temporal
TAO:0000549
postemporal
Dermal bone of the secondary pectoral girdle that attaches the girdle to the skull. Its dorsal process attaches to the epiotic or epioccipital, the ventral process to the intercalar and the body articulates with the supracleithrum. The postotic sensory canal or lateral line runs within or lateral to bone.
TAO:GA_TG
TAO:0000549
posttemporale
true
TAO:0000549
suprascapula
true
nucleus lateralis valvulae
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
opercular flap
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gill cover
opercular apparatus
operculum
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000555
gill cover
TAO:0000555
opercular apparatus
TAO:0000555
operculum
preural 1 vertebra
Last caudal vertebra identified as the point at which the caudal vessels bifurcate, leaving the protection of the haemal arches of the caudal vertebrae and running laterally to the hypurals. This vertebra bears, commonly, a well-developed haemal arch and its spine (parhypural).
The haemal arch may be fused to the centrum or not. In contrast, the neural arch and spine may be well developed, or rudimentary or absent in different teleost subgroups.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
penultimate vertebra
preural centrum 1
pu1
second last vertebra
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000557
preural centrum 1
TAO:0000557
penultimate vertebra
Last caudal vertebra identified as the point at which the caudal vessels bifurcate, leaving the protection of the haemal arches of the caudal vertebrae and running laterally to the hypurals. This vertebra bears, commonly, a well-developed haemal arch and its spine (parhypural).
TAO:GA_TG
TAO:0000557
pu1
TAO:0000557
second last vertebra
posterior macula
Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pm
posteromedial macula
sensory patch
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000558
sensory patch
Patches of thickened, pseudostratified epithelium of the inner ear, consisting of regular arrays of sensory hair cells interspersed with supporting cells. Each patch has its own charcteristic shape and polarity pattern. (See Anatomical Atlas entry for sensory patches of the ear by T. Whitfield.)
ZFIN:curator
TAO:0000558
pm
TAO:0000558
posteromedial macula
pelvic abductor profundus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
presumptive telencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
internal cellular layer
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
pterotic
Endochondral bone that articulates with the autosphenotic anteriorly, the parietal dorsomedially, the prootic ventrally (and the intercalar occasionally), and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet. The pterotic is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
autopterotic
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000576
autopterotic
true
true
Endochondral bone that articulates with the autosphenotic anteriorly, the parietal dorsomedially, the prootic ventrally (and the intercalar occasionally), and the epiotic and exoccipital posteriorly. The pterotic encloses the horizontal semicircular canal of the inner ear. The lower edge of the pterotic contributes to the hyomandibular facet. The pterotic is paired.
ZFIN:curator
true
rostral mesencephalo-cerebellar tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
rostral preglomerular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
rostral tuberal nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior tuberal nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000581
anterior tuberal nucleus
saccus dorsalis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
kinethmoid cartilage
Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
kinethmoideum cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid.
ZFIN:curator
TAO:0000585
kinethmoideum cartilage
preural 2 vertebra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra anterior to preural centrum 1; sometimes termed the 'antepenultimate' vertebra. Mabee and Bird, 2001.
antepenultimate vertebra
preural centrum 2
pu2
teleost_anatomy_curators
third last vertebra
uberon/phenoscape-anatomy
TAO:0000586
pu2
Vertebra anterior to preural centrum 1; sometimes termed the 'antepenultimate' vertebra. Mabee and Bird, 2001.
ZFIN:curator
TAO:0000586
antepenultimate vertebra
TAO:0000586
preural centrum 2
TAO:0000586
third last vertebra
sphenotic
Endochondral bone that sutures with the pterosphenoid anteriorly, the prootic ventrally, the frontal bone dorso-medially, and the pterotic dorso-posteriorly. Occasionally the sphenotic sutures with the parietal bone. The sphenotic separates the orbital from the otic region. The sphenotic bears a large antero-lateral or lateral or ventro-lateral process that borders the postero-dorsal margin of the orbit. The sphenotic is a paired bone.
The lower edge of the sphenotic may contribute to the hyomandibular facet depending on the fish group.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
autosphenotic
sphenotics
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000587
autosphenotic
Endochondral bone that sutures with the pterosphenoid anteriorly, the prootic ventrally, the frontal bone dorso-medially, and the pterotic dorso-posteriorly. Occasionally the sphenotic sutures with the parietal bone. The sphenotic separates the orbital from the otic region. The sphenotic bears a large antero-lateral or lateral or ventro-lateral process that borders the postero-dorsal margin of the orbit. The sphenotic is a paired bone.
ZFIN:curator
true
true
TAO:0000587
sphenotics
sulcus ypsiloniformis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
superficial pelvic adductor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
superior reticular formation medial column
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
supracleithrum
Dermal bone that articulates dorsally with the posttemporal and ventrally with the cleithrum. Supracleithrum is part of the secondary pectoral girdle and commonly, carries part of the lateral line canal.
The dorsalmost postcleithrum or postcleithrum 1 may lie medial to the ventral part of the supracleithrum. The postotic canal or lateral line may run close to the dorsal margin or in the upper third or in the lowest third of the bone depending on the fish group.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
supracleithra
teleost_anatomy_curators
uberon/phenoscape-anatomy
hypercleithrum
supracleithrum
épiclithrum
PSPUB:0000131
hypercleithrum
Dermal bone that articulates dorsally with the posttemporal and ventrally with the cleithrum. Supracleithrum is part of the secondary pectoral girdle and commonly, carries part of the lateral line canal.
TAO:GA_TG
TAO:wd
TAO:0000594
supracleithra
PSPUB:0000132
épiclithrum
PSPUB:0000164
supracleithrum
true
pelvic fin actinotrichium
Actinotrichium that is part of the pelvic fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Actinotrichium that is part of the pelvic fin.
TAO:wd
true
telencephalic tracts
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
torus semicircularis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
pretectal periventricular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
uroneural
Neural arch that extends along the dorso-lateral surface of the last preural centra and/or ural centra and the notochord (Arratia & Schultze, 1992). An uroneural develops as a modification of the neural arch of an ural centrum (Patterson, 1968). The series of uroneurals may include from 7 to 1 elements that are numbered from rostrad to caudad. An uroneural is a paired membrane bone.
The presence of modified ural neural arches or uroneurals is interpreted as a synapomorphy of Teleostei. Uroneurals present some modifications in certain teleost subgroups and such specialized structures are named pleurostyle (e.g., ostarioclupeomorphs) and stegural (e.g., salmonids).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
uroneurals
TAO:0000602
uroneurals
true
Neural arch that extends along the dorso-lateral surface of the last preural centra and/or ural centra and the notochord (Arratia & Schultze, 1992). An uroneural develops as a modification of the neural arch of an ural centrum (Patterson, 1968). The series of uroneurals may include from 7 to 1 elements that are numbered from rostrad to caudad. An uroneural is a paired membrane bone.
TAO:Arratia_Schultze_1992
TAO:Patterson_1968
valvula cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
valvula cerebellum
true
TAO:0000603
valvula cerebellum
obsolete ventral oblique branchial muscle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
removed axiom: part_of some 'pharyngeal muscle'
no information about this class, may be zebrafish specific nomenclature.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
ventral oblique branchial muscles
TAO:0000606
ventral oblique branchial muscles
ventral rhombencephalic commissure brain stem
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral transverse
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventrolateral nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
vertical myoseptum
Connective tissue partitions developing between the myotomes. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
transverse myoseptum
uberon/phenoscape-anatomy
Connective tissue partitions developing between the myotomes. Kimmel et al, 1995.
ZFIN:curator
TAO:0000610
transverse myoseptum
visceromotor column
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
abductor profundus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
adductor arcus palatini
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
adductor profundus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
anal erector
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ansulate commissure
A brainstem commissure that contains major crossed descending projections from both tectal lobes.
This class is present in fishes and amphibians.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
A brainstem commissure that contains major crossed descending projections from both tectal lobes.
http://www.ncbi.nlm.nih.gov/pubmed/3496554
autopalatine
Endochondral bone that is part of the antero-lateral region of the palate. Commonly, it articulates with the maxilla anterolaterally and with the ethmoidal region medially. It may also articulate with the dermopalatine ventro-laterally and with the entopterygoid posteriorly. The autopalatine is paired.
The cartilaginous autopalatine forms from the anterior palatoquadrate arch. Possession of a dorsomedial process, which abuts the ethmoid, is a unique feature shared by Cypriniformes (Fink and Fink, 1981). The palatine has two components, the autopalatine (derived from pars autopalatine) and the dermal component having teeth, the dermopalatine Arratia & Schultze 1990. The element in cypriniforms is only the cartilage part, so that it is more correct to name it autopalatine and not as palatine in general that it implies a fusion of elements (as in perciforms).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
palatine bone
palatines
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000620
palatine bone
true
TAO:0000620
palatines
Endochondral bone that is part of the antero-lateral region of the palate. Commonly, it articulates with the maxilla anterolaterally and with the ethmoidal region medially. It may also articulate with the dermopalatine ventro-laterally and with the entopterygoid posteriorly. The autopalatine is paired.
ZFIN:curator
barbel
Surface structure which is a tactile structure found in the branchial region. Barbels are covered with epidermis rich in taste buds, and are innervated by branches of the cranial nerves.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
barbels
barble
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000622
barble
TAO:0000622
barbels
Surface structure which is a tactile structure found in the branchial region. Barbels are covered with epidermis rich in taste buds, and are innervated by branches of the cranial nerves.
ZFIN:curator
basipterygium
Endochondral bone that is paired and supports the pelvic fin. The basipterygium has a posteromedial process called the ischiac process (Wietzman 1962).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basipterygia
pelvic bone
teleost_anatomy_curators
uberon/phenoscape-anatomy
basiptérygium ischiatique
os pelvien
true
Endochondral bone that is paired and supports the pelvic fin. The basipterygium has a posteromedial process called the ischiac process (Wietzman 1962).
TAO:wd
PSPUB:0000145
basiptérygium ischiatique
TAO:0000623
pelvic bone
PSPUB:0000164
os pelvien
TAO:0000623
basipterygia
obsolete brachium conjunctivum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
brachium conjunctivium
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000624
brachium conjunctivium
bulbo-spinal tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior ceratohyal
Posterohyal is used in Rapp Py Daniel (1997).
Replacement bone that is bilaterally paired and articulates anteriorly with the anterior ceratohyal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal ceratohyal
epihyal
posterohyal
proximal ceratohyal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000627
caudal ceratohyal
TAO:0000627
epihyal
Replacement bone that is bilaterally paired and articulates anteriorly with the anterior ceratohyal.
ZFIN:curator
TAO:0000627
posterohyal
true
TAO:0000627
proximal ceratohyal
caudal fin musculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal motor nucleus of abducens
Caudal part of the abducens nucleus that mediates motor function.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
caudal parvocellular preoptic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
caudal tuberculum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior tubercle
posterior tuberculum
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000633
posterior tuberculum
TAO:0000633
posterior tubercle
true
caudal zone of median tuberal portion of hypothalamus
teleost_anatomy_curators
uberon/phenoscape-anatomy
central pretectal nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
cerebellar crest
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
claustrum cartilage
Postcranial axial cartilage and Weberian ossicle that is located dorsal to the scaphium. The claustrum cartilage is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
first Weberian ossicle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000637
first Weberian ossicle
true
Postcranial axial cartilage and Weberian ossicle that is located dorsal to the scaphium. The claustrum cartilage is bilaterally paired.
ZFIN:curator
commissura rostral, pars dorsalis
Part of the anterior commissure which is located immediately ventral to the supracommissural nucleus of area ventralis telencephali.
teleost_anatomy_curators
uberon/phenoscape-anatomy
ISBN:3764351209
Part of the anterior commissure which is located immediately ventral to the supracommissural nucleus of area ventralis telencephali.
true
commissure of the secondary gustatory nuclei
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
decussation of the medial octavolateralis nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
rostral cerebellar tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete dental plate
obsoleted because was artificially generalized from zebrafish, wherein it is currently obsolete.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
descending octaval nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin distal radial
Rod-like internal median skeletal support bones of the anal fin, which articulate with the lepidotrichia distally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
distal anal fin radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rod-like internal median skeletal support bones of the anal fin, which articulate with the lepidotrichia distally.
ZFIN:curator
TAO:0000646
distal anal fin radial
dorsal caudal thalamic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal posterior thalamic nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000647
dorsal posterior thalamic nucleus
dorsal fin musculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsal pelvic arrector
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
rostral motor nucleus of abducens
Rostral part of the abducens nucleus that mediates motor function.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
obsolete dorsomedial optic tract
removed axiom: white matter and part_of some 'optic tract'.
Not clear that directional labels for optic tract parts are consistent across taxa. To be reviewed.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
entopterygoid
Dermal bone that forms the ventro-medial part of the palate and the antero-ventral and ventral wall of the orbit. The entopterygoid is a paired bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
endopterygoid bone
mesopterygoid
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that forms the ventro-medial part of the palate and the antero-ventral and ventral wall of the orbit. The entopterygoid is a paired bone.
TAO:GA_TG
TAO:0000657
mesopterygoid
true
true
epibranchial bone
Dorsal branchial arch bone that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone and medially with pharyngobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epibranchial bones
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000658
epibranchial bones
Dorsal branchial arch bone that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone and medially with pharyngobranchial cartilage or bone.
ZFIN:curator
epural
epiural apophysis
A free, modified neural spine of a preural or a ural vertebra that is placed between the last developed neural spine of a preural centrum and the dorsal axis (= anterior margin of first uroneural) of the caudal skeleton . An epural commonly supports one or more dorsal procurrent rays. An epural is an unpaired median perichondrally ossified bone.
The origin of the epurals is unclear, three hypotheses have been proposed: 1) The epurals are modified radials or dorsal radials; 2) the epurals are detached neural spines and may support fin rays; and 3) the epurals are a serial homologue of the supraneuralia. At least in teleosts the epural is a detached neural spine. For details see Schultze and Arratia (1989) and Arratia and Schultze (1992).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epiural
epurals
teleost_anatomy_curators
uberon/phenoscape-anatomy
éphural
épural
TAO:0000660
epiural
epiural apophysis
TAO:0000660
A free, modified neural spine of a preural or a ural vertebra that is placed between the last developed neural spine of a preural centrum and the dorsal axis (= anterior margin of first uroneural) of the caudal skeleton . An epural commonly supports one or more dorsal procurrent rays. An epural is an unpaired median perichondrally ossified bone.
TAO:Arratia and Schultze_1992
PSPUB:0000138
éphural
TAO:0000660
epurals
PSPUB:0000164
épural
external pharyngoclavicularis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
extrascapula
Dermal canal-bearing bone placed at the dorso-posterior region of the skull roof, lying on the posterior region of the pterotic and parietals, or the pterotic and epioccipital, or on the pterotic, epioccipital and occipital bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2001413
When it is present, the paired series of extrascapular bones may include one pair or two pairs or two pairs plus a median one. The most lateral is named lateral extrascapula and is the bone where the intersection of the otic, postotic and extrascapular or supratemporal canals occur. The medial and median extrascapulars carry the extrascapular or supratemporal canal.
extrascapular
extrascapular bone
scale bone
supratemporal
tabular
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000663
extrascapular
Dermal canal-bearing bone placed at the dorso-posterior region of the skull roof, lying on the posterior region of the pterotic and parietals, or the pterotic and epioccipital, or on the pterotic, epioccipital and occipital bones.
TAO:GA_TG
TAO:wd
TAO:Harrington_1955
TAO:Weitzman_1962
tabular
TAO:0000663
supratemporal
TAO:0000663
extrascapular bone
TAO:0000663
scale bone
filamental artery
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
filamental arteries
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000666
filamental arteries
true
hypobranchial artery
A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart.sogai et al. 2001.
HA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
HA
TAO:0000673
A pair of HA are connect one to each AA1. They run rostromedially until at the extreme rostro-ventral midline the two vessels merge and then run straight caudally along the ventral midline until they reach the cranial end of the ventral aorta (VA). There, the single HA passes just dorsal to the rostral end of the VA and then immediately splits again into a pair of HA. The paired HA continue caudally just to either side of the ventral midline. The HA provide blood supply to the ventral branchial region and the heart.sogai et al. 2001.
ZFIN:curator
true
interopercle
Dermal bone that is part of the opercular series. It is located ventro-medially to the preopercle and anterior to the subopercle. It is joined to the posterior part of the lower jaw (retroarticular) by a ligament. The interopercle is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
interopercles
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000674
interopercles
Dermal bone that is part of the opercular series. It is located ventro-medially to the preopercle and anterior to the subopercle. It is joined to the posterior part of the lower jaw (retroarticular) by a ligament. The interopercle is paired.
TAO:wd
sagitta
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
saccular otolith
sacculith
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000676
saccular otolith
TAO:0000676
sacculith
hair cell anterior macula
Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sensory hair cells anterior macula
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000678
sensory hair cells anterior macula
Specialized neuronal receptor cells of the lateral line and acoustico-vestibular systems. Kimmel et al, 1995. (Also see Anatomical Atlas entry for hair cells by T. Whitfield.)
ZFIN:curator
superficial abductor
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
superficial pretectum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete olfactory support cell
support cells
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000688
support cells
supracommissural nucleus of V
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
supraoptic commissure
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
supraorbital bone
Dermal bone that is part of the dorsal or upper border or antero-dorsal border of the orbit. The supraorbital bone may contact the orbital margin of the frontal bone medially, the antorbital antero-ventrally and the dermosphenotic posteriorly. The supraorbital bone does not carry sensory canals. The supraorbital bone is paired.
The supraorbital bone may be present as two or one bone in extant teleosts, although many of the advanced forms lack the bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is part of the dorsal or upper border or antero-dorsal border of the orbit. The supraorbital bone may contact the orbital margin of the frontal bone medially, the antorbital antero-ventrally and the dermosphenotic posteriorly. The supraorbital bone does not carry sensory canals. The supraorbital bone is paired.
TAO:GA_TG
true
symplectic
Replacement bone that is bilaterally paired and articulates with the hyomandibula and the quadrate.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
When the interhyal bone or cartilage is present it articulates at the articulation of the hyomandibula and symplectic.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Replacement bone that is bilaterally paired and articulates with the hyomandibula and the quadrate.
ZFIN:curator
tangential nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ceratobranchial 5 tooth
Ceratobranchial 5 teeth are the only teeth present in zebrafish and other cypriniforms.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that forms on ceratobranchial 5 cartilage or bone.
pharyngeal teeth
teleost_anatomy_curators
uberon/phenoscape-anatomy
Tooth that forms on ceratobranchial 5 cartilage or bone.
ZFIN:curator
TAO:0000694
pharyngeal teeth
labial cavities
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
tripus
Endochondral bone, membrane bone, and Weberian ossicle that is an element of third vertebra. Anteriorly it attaches to the interosseus ligament and posteriorly it extends as a transformator process embedded in the tunica externa of the swimbladder.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Weberian ossicle 4
fourth Weberian ossicle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000698
Weberian ossicle 4
TAO:0000698
fourth Weberian ossicle
true
Endochondral bone, membrane bone, and Weberian ossicle that is an element of third vertebra. Anteriorly it attaches to the interosseus ligament and posteriorly it extends as a transformator process embedded in the tunica externa of the swimbladder.
ZFIN:curator
entopterygoid vertical strut
Fink and Fink 1981, present in gymnotoids.
Process that is the dorsally directed, vertical process of the entopterygoid. The strut sometimes articulates with the orbitosphenoid.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
endopterygoid vertical strut
mesopterygoid vertical strut
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000699
endopterygoid vertical strut
true
TAO:0000699
mesopterygoid vertical strut
Process that is the dorsally directed, vertical process of the entopterygoid. The strut sometimes articulates with the orbitosphenoid.
TAO:wd
true
ventral arrector
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ventral motor nucleus trigeminal nerve
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral pelvic arrector
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ventral zone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete ventrolateral optic tract
removed axiom: part_of some 'optic tract'
Not clear that directional labels for optic tract parts are consistent across taxa. To be reviewed.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
viscerosensory commissural nucleus of Cajal
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
DEL
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast. Kimmel et al, 1995.
DEL cells
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
deep cell layer
teleost_anatomy_curators
uberon/phenoscape-anatomy
ZFIN:ZDB-PUB-961014-576
deep cell layer
A multilayer of deep cells of fairly uniform thickness that forms during early epiboly (at dome stage; upon conversion of the blastodisc to the blastoderm); during gastrulation the DEL (deep cell layer) gives rise to the epiblast and hypoblast. Kimmel et al, 1995.
ZFIN:curator
DEL cells
TAO:0000711
I-YSL
The portion of the YSL that lies deep to the blastoderm during epiboly. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
internal yolk syncytial layer
teleost_anatomy_curators
uberon/phenoscape-anatomy
The portion of the YSL that lies deep to the blastoderm during epiboly. Kimmel et al, 1995.
ZFIN:curator
true
ZFIN:ZDB-PUB-961014-576
internal yolk syncytial layer
accessory pretectal nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
adductor hyohyoid
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
afferent branchial artery
ABA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ABA
TAO:0000716
true
true
apical ectodermal ridge median fin fold
Apical ectodermal ridge that is part of the median fin fold.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
apical ectodermal ridge median fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000717
apical ectodermal ridge median fin-fold
Apical ectodermal ridge that is part of the median fin fold.
ZFIN:curator
epaxial region somite 27
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
slow muscle cell somite 21
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 21
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000719
slow muscle cells somite 21
slow muscle cell somite 24
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 24
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000720
slow muscle cells somite 24
slow muscle cell somite 27
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 27
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000721
slow muscle cells somite 27
slow muscle cell somite 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 3
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000722
slow muscle cells somite 3
slow muscle cell somite 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 5
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000723
slow muscle cells somite 5
slow muscle cell somite 8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 8
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000724
slow muscle cells somite 8
somite 11
11
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 14
14
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 17
17
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 2
2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 3
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
somite 23
23
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 27
27
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 3
3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 7
7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
preural vertebra
Caudal vertebra that is one of the last caudal vertebrae anterior to the ural vertebrae that with its neural and haemal spines supports the procurrent caudal fin rays or lepidotrichia. The numbering of preural vertebrae is from caudal to rostral direction.
The term preural vertebra was created by Nybelin (1963) for those vertebrae supporting caudal procurrent rays. For additional information see Arratia and Schultze (1992). Their neural and hemal arches may or may not be fused to their corresponding autocentrum. Fusion or separation of certain neural and/or haemal arches of preural centra is characteristic or certain teleosts subgroup. The boundary between preural and ural region is determined by the bifurcation of the four or five blood vessels running inside the hemal arches of the preural vertebrae (primary caudal artery, two secondary arterial trunks, primary caudal vein, and secondary subvertebral vein) (for details see Schultze & Arratia, 1989). The bifurcation of the caudal artery and vein was proposed as a landmark to homologize preural centrum 1 throughout actinopterygians (Nybelin, 1963).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin vertebra
specialized centra/vertebrae
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000734
specialized centra/vertebrae
TAO:0000734
caudal fin vertebra
Caudal vertebra that is one of the last caudal vertebrae anterior to the ural vertebrae that with its neural and haemal spines supports the procurrent caudal fin rays or lepidotrichia. The numbering of preural vertebrae is from caudal to rostral direction.
TAO:GA_TG
hemal postzygapophysis
Paired, ventromedially directed processes on the posterior ends of the centra, ligamentously joined to the hemal postzygapophyses of the immediately posterior vertebra. The most posterior caudal vertebrae lack hemal postzygapophyses.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haemal postzygapophysis
hemal postygopophysis
hemal postzygapophyses
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000735
haemal postzygapophysis
TAO:0000735
hemal postygopophysis
TAO:0000735
hemal postzygapophyses
Paired, ventromedially directed processes on the posterior ends of the centra, ligamentously joined to the hemal postzygapophyses of the immediately posterior vertebra. The most posterior caudal vertebrae lack hemal postzygapophyses.
ZFIN:curator
true
epaxial region somite 11
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 5
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 14
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 17
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 2
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 22
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 25
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 28
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 30
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 6
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 9
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
fast muscle cell somite 10
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 10
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000750
fast muscle cells somite 10
epaxial region somite 8
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
fast muscle cell somite 13
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 13
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000752
fast muscle cells somite 13
fast muscle cell somite 16
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 16
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000753
fast muscle cells somite 16
fast muscle cell somite 19
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 19
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000754
fast muscle cells somite 19
fast muscle cell somite 21
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 21
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000755
fast muscle cells somite 21
fast muscle cell somite 24
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 24
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000756
fast muscle cells somite 24
fast muscle cell somite 27
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 27
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000757
fast muscle cells somite 27
fast muscle cell somite 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 3
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000758
fast muscle cells somite 3
fast muscle cell somite 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 5
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000759
fast muscle cells somite 5
fast muscle cell somite 8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 8
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000760
fast muscle cells somite 8
granular layer valvula cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
hypaxial region somite 11
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 14
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 17
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 2
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 22
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 25
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
fast muscle cell somite 12
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 12
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000773
fast muscle cells somite 12
hypaxial region somite 28
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 30
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 6
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 9
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
obsolete interneuron spinal cord
interneurons spinal cord
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000778
interneurons spinal cord
lateral forebrain bundle telencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
fast muscle cell somite 15
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 15
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000784
fast muscle cells somite 15
mesenchyme dorsal fin
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete muscle pioneer somite 10
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 10
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000790
muscle pioneers somite 10
obsolete muscle pioneer somite 13
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 13
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000791
muscle pioneers somite 13
obsolete muscle pioneer somite 16
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 16
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000792
muscle pioneers somite 16
obsolete muscle pioneer somite 19
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 19
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000793
muscle pioneers somite 19
obsolete muscle pioneer somite 22
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 22
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000794
muscle pioneers somite 22
fast muscle cell somite 18
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 18
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000795
fast muscle cells somite 18
obsolete muscle pioneer somite 25
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 25
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000796
muscle pioneers somite 25
obsolete muscle pioneer somite 28
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 28
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000797
muscle pioneers somite 28
obsolete muscle pioneer somite 30
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 30
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000798
muscle pioneers somite 30
obsolete muscle pioneer somite 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 6
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000799
muscle pioneers somite 6
obsolete muscle pioneer somite 9
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 9
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000800
muscle pioneers somite 9
myotome somite 11
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 15
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 18
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 20
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 23
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
fast muscle cell somite 20
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 20
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000806
fast muscle cells somite 20
myotome somite 26
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 29
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 4
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 7
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
infraorbital lateral line neuromast
Neuromast that is part of the infraorbital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neuromast infraorbital
neuromasts infraorbital
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000813
neuromast infraorbital
Neuromast that is part of the infraorbital lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
TAO:0000813
neuromasts infraorbital
opercular lateral line neuromast
Neuromast that is part of the opercular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neuromast opercular
neuromasts opercular
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000814
neuromasts opercular
TAO:0000814
neuromast opercular
Neuromast that is part of the opercular lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
fast muscle cell somite 23
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 23
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000817
fast muscle cells somite 23
postcommissural nucleus of V central entopeduncular nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
presumptive neuron neural tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
presumptive neurons neural tube
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0000820
presumptive neurons neural tube
primary neuron hindbrain
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
primary neurons hindbrain
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000821
primary neurons hindbrain
central nucleus torus semicircularis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
fast muscle cell somite 26
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 26
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000827
fast muscle cells somite 26
sclerotome somite 11
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 14
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 17
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 2
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 22
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 25
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 28
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 30
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 6
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
fast muscle cell somite 29
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 29
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000838
fast muscle cells somite 29
sclerotome somite 9
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
slow muscle cell somite 11
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 11
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000840
slow muscle cells somite 11
slow muscle cell somite 14
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 14
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000841
slow muscle cells somite 14
slow muscle cell somite 17
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 17
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000842
slow muscle cells somite 17
slow muscle cell somite 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000843
slow muscle cells somite 2
slow muscle cell somite 22
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 22
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000844
slow muscle cells somite 22
slow muscle cell somite 25
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 25
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000845
slow muscle cells somite 25
slow muscle cell somite 28
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 28
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000846
slow muscle cells somite 28
slow muscle cell somite 30
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 30
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000847
slow muscle cells somite 30
slow muscle cell somite 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 6
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000848
slow muscle cells somite 6
fast muscle cell somite 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 4
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000849
fast muscle cells somite 4
slow muscle cell somite 9
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 9
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000850
slow muscle cells somite 9
somite 12
12
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 15
15
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 18
18
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 21
21
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 24
24
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 28
28
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 4
4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 8
8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
specialized hemal arch and spine
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ha(pu)
hemal arches (preural)
specialized haemal arch and spine
specialized hemal arches and spines
teleost_anatomy_curators
uberon/phenoscape-anatomy
ZFIN:ZDB-PUB-011008-1
hemal arches (preural)
true
TAO:0000859
specialized hemal arches and spines
TAO:0000859
ha(pu)
TAO:0000859
specialized haemal arch and spine
fast muscle cell somite 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 7
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000860
fast muscle cells somite 7
obsolete caudal fin skeleton
Median fin skeleton supporting the caudal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000167
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Median fin skeleton supporting the caudal fin.
TAO:wd
epaxial region somite 1
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 12
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 15
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 18
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 20
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 23
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 26
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 29
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 4
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 7
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. immel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. immel et al, 1995.
ZFIN:curator
fast muscle cell somite 11
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 11
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000876
fast muscle cells somite 11
fast muscle cell somite 14
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 14
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000877
fast muscle cells somite 14
fast muscle cell somite 17
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 17
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000878
fast muscle cells somite 17
fast muscle cell somite 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000879
fast muscle cells somite 2
fast muscle cell somite 22
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 22
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000880
fast muscle cells somite 22
fast muscle cell somite 25
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 25
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000881
fast muscle cells somite 25
fast muscle cell somite 28
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 28
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000883
fast muscle cells somite 28
fast muscle cell somite 30
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 30
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000884
fast muscle cells somite 30
fast muscle cell somite 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 6
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000885
fast muscle cells somite 6
fast muscle cell somite 9
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fast muscle cells somite 9
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000886
fast muscle cells somite 9
floor plate neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
floorplate neural rod
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000887
floorplate neural rod
hypaxial region somite 1
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 12
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 15
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 18
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 20
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 23
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 26
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 29
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 4
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 7
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypural musculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypural muscles
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000902
hypural muscles
medial forebrain bundle telencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
transverse process of neural arch 3
Endochondral bone that is the anterodorsally oriented process of the third neural arch.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterodorsal process of neural arch 3
teleost_anatomy_curators
transverse process of the third vertebra
uberon/phenoscape-anatomy
true
Endochondral bone that is the anterodorsally oriented process of the third neural arch.
TAO:wd
true
TAO:0000911
anterodorsal process of neural arch 3
TAO:0000911
transverse process of the third vertebra
mesenchyme median fin fold
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesenchyme median fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000912
mesenchyme median fin-fold
molecular layer valvula cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete muscle pioneer somite 11
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 11
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000915
muscle pioneers somite 11
obsolete muscle pioneer somite 14
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 14
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000916
muscle pioneers somite 14
obsolete muscle pioneer somite 17
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 17
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000917
muscle pioneers somite 17
obsolete muscle pioneer somite 20
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 20
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000918
muscle pioneers somite 20
obsolete muscle pioneer somite 23
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 23
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000919
muscle pioneers somite 23
obsolete muscle pioneer somite 26
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 26
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000920
muscle pioneers somite 26
obsolete muscle pioneer somite 29
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 29
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000921
muscle pioneers somite 29
obsolete muscle pioneer somite 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 4
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000922
muscle pioneers somite 4
obsolete muscle pioneer somite 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 7
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0000923
muscle pioneers somite 7
myotome somite 1
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 10
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
myotome somite 12
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 16
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 19
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.>
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.>
ZFIN:curator
myotome somite 21
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 24
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 27
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 3
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 5
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 8
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
dorsal fin distal radial
Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the lepidotrichia distally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the lepidotrichia distally.
ZFIN:curator
hypaxial region somite 13
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
posterior lateral line neuromast
Neuromast that is part of the posterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neuromast posterior
neuromasts posterior
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000940
neuromasts posterior
TAO:0000940
neuromast posterior
Neuromast that is part of the posterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
nucleus of the medial longitudinal fasciculus synencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete paraxial mesenchyme
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
hypaxial region somite 16
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
dorsal fin proximal radial
Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the distal radials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basal radial of dorsal fin
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rod-like internal median skeletal support bones of the dorsal fin, which articulate with the distal radials.
ZFIN:curator
TAO:0000947
basal radial of dorsal fin
sclerotome somite 1
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 12
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 15
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 18
Medial ventral region of the somite that will form vertebral cartilages. immel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. immel et al, 1995.
ZFIN:curator
sclerotome somite 20
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 19
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 23
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 26
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 29
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 4
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 7
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
slow muscle cell somite 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 1
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000963
slow muscle cells somite 1
slow muscle cell somite 12
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 12
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000964
slow muscle cells somite 12
slow muscle cell somite 15
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 15
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000965
slow muscle cells somite 15
slow muscle cell somite 18
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 18
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000966
slow muscle cells somite 18
slow muscle cell somite 20
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 20
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000967
slow muscle cells somite 20
hypaxial region somite 21
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
slow muscle cell somite 23
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 23
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000969
slow muscle cells somite 23
slow muscle cell somite 26
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 26
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000970
slow muscle cells somite 26
slow muscle cell somite 29
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 29
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000971
slow muscle cells somite 29
slow muscle cell somite 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 4
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000972
slow muscle cells somite 4
slow muscle cell somite 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 7
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0000973
slow muscle cells somite 7
somite 10
10
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 13
13
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 16
16
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 19
19
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 22
22
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 24
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
somite 25
25
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 29
29
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 6
6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
somite 9
9
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Undifferentiated mesodermal component of early trunk or tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome. Kimmel et al, 1995.
ZFIN:curator
superior reticular formation tegmentum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
ventral rhombencephalic commissure medulla oblongata
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
hypaxial region somite 27
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 3
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 5
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypaxial region somite 8
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present ventral to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 10
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
lateral wall neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
medial funicular nucleus trigeminal nuclei
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epaxial region somite 13
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
obsolete motor axons peripheral
removed axiom: part_of some 'central nervous system'
Seems out of scope for uberon and/or not very useful as a class.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete muscle pioneer somite 12
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 12
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001003
muscle pioneers somite 12
obsolete muscle pioneer somite 15
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 15
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001004
muscle pioneers somite 15
obsolete muscle pioneer somite 18
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 18
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001005
muscle pioneers somite 18
obsolete muscle pioneer somite 21
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 21
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001006
muscle pioneers somite 21
obsolete muscle pioneer somite 24
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 24
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001007
muscle pioneers somite 24
obsolete muscle pioneer somite 27
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 27
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001008
muscle pioneers somite 27
obsolete muscle pioneer somite 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 3
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001009
muscle pioneers somite 3
obsolete muscle pioneer somite 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 5
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001010
muscle pioneers somite 5
obsolete muscle pioneer somite 8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers somite 8
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001011
muscle pioneers somite 8
epaxial region somite 16
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
myotome somite 10
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 13
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 17
Portion of the somite giving rise to body wall muscle masses. immel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. immel et al, 1995.
ZFIN:curator
myotome somite 2
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 22
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 25
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 28
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 30
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 6
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. Kimmel et al, 1995.
ZFIN:curator
myotome somite 9
Portion of the somite giving rise to body wall muscle masses. immel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the somite giving rise to body wall muscle masses. immel et al, 1995.
ZFIN:curator
epaxial region somite 19
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
hypurapophysis
Lateral process, spine-like or crest-like, at the lateral wall of the haemal arch of the parhypural that serves for insertion of the hypochordal longitudinal muscle. The process may contribute to the lateral protection of the parhypural foramen (where the caudal blood vessels exit the hemal arch) and the hypural foramen (where a caudal heart may be present). The hypurapophysis is paired.
The structure, the processus parhypurale, was given the name of hypurapophysis by Nursall (1963). Additional processes may be present on the lateral walls of hypurals 1 and 2 in some teleost subgroups. They are named primary, secondary hypurapophyses, etc.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypurapophyses
parhypurapophyses
parhypurapophyses processes
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001028
parhypurapophyses
true
TAO:0001028
hypurapophyses
Lateral process, spine-like or crest-like, at the lateral wall of the haemal arch of the parhypural that serves for insertion of the hypochordal longitudinal muscle. The process may contribute to the lateral protection of the parhypural foramen (where the caudal blood vessels exit the hemal arch) and the hypural foramen (where a caudal heart may be present). The hypurapophysis is paired.
ZFIN:curator
true
TAO:0001028
parhypurapophyses processes
epaxial region somite 21
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 10
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 13
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 16
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 19
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
epaxial region somite 24
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Somite-derived body wall muscle present dorsal to the horizontal myoseptum. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 21
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 24
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 27
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 3
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 5
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
sclerotome somite 8
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Medial ventral region of the somite that will form vertebral cartilages. Kimmel et al, 1995.
ZFIN:curator
slow muscle cell somite 10
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 10
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001047
slow muscle cells somite 10
slow muscle cell somite 13
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 13
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001048
slow muscle cells somite 13
slow muscle cell somite 16
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 16
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001049
slow muscle cells somite 16
slow muscle cell somite 19
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
slow muscle cells somite 19
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001050
slow muscle cells somite 19
caudal division of the internal carotid artery
CaDI
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
CaDI
TAO:0001051
primordial hindbrain channel
PHCB
The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins. Isogai et al. (2002)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
medial head vein
teleost_anatomy_curators
uberon/phenoscape-anatomy
PHCB
TAO:0001052
true
TAO:0001052
medial head vein
true
The paired vessels that run along the lateral walls of the hindbrain and drain into the anterior cardinal veins. Isogai et al. (2002)
ZFIN:curator
primitive internal carotid artery
PICA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
PICA
TAO:0001053
lateral dorsal aorta
Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is is called the radiax of the aorta. Isogai et al. 2001.
LDA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Connect the outflow of the aortic arches to the dorsal aorta. The place where the lateral dorsal aorta fuse is is called the radiax of the aorta. Isogai et al. 2001.
ZFIN:curator
LDA
TAO:0001054
pronephric duct opening
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete caudal fin
The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000164
tail
tail fin
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
nageoire caudale
uroptère
uroptérygie
PSPUB:0000140
uroptérygie
PSPUB:0000164
nageoire caudale
PSPUB:0000135
uroptère
TAO:0001058
tail
The caudal fin is the most posterior median fin. It is composed of a complex of three modified centra and modified neural and hemal arches and spines. Mabee and Bird, 2001.
ZFIN:curator
TAO:0001058
tail fin
cranial division of the internal carotid artery
CrDI
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral division of the internal carotid artery
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001059
rostral division of the internal carotid artery
CrDI
TAO:0001059
true
true
basidorsal
Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
arcualia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001060
arcualia
Basidorsals are bilaterally paired cartilages on the dorsolateral side of the notochord which are replaced by ossified neural arches or dorsal arcocentra. In otophysan fishes, basidorsal 1, bd2, bd3, and bd4 give rise to parts of the Weberian apparatus.
ZFIN:curator
posterior caudal vein
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete lateral mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
ventral fin fold
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin fold
anal fin-fold
tail fin fold
tail fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral fin
ventral fin-fold
TAO:0001069
tail fin-fold
TAO:0001069
anal fin-fold
TAO:0001069
anal fin fold
TAO:0001069
ventral fin-fold
TAO:0001069
ventral fin
TAO:0001069
tail fin fold
axial vasculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
intestinal bulb
This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area. Wallace et al, 2005.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior intestine
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
This anteriormost portion of the intestine has the most digestive enzymes and the greatest epithelial surface area. Wallace et al, 2005.
ZFIN:curator
TAO:0001076
anterior intestine
obsolete muscle pioneer
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
muscle pioneers
non migratory adaxial cells
teleost_anatomy_curators
this class and all children are being obsoleted from uberon because they were unnecessarily generalized into TAO and because they are cell types.
true
uberon/phenoscape-anatomy
TAO:0001086
muscle pioneers
TAO:0001086
non migratory adaxial cells
myoseptum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete unspecified
Annotation with this anatomy term indicates that a structure was not specified by the author.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Annotation with this anatomy term indicates that a structure was not specified by the author.
ZFIN:curator
immature macula
An otic sensory epithelium that will develop into the mature macula.
immature maculae
immature sensory patch
immature sensory patches
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001095
immature maculae
An otic sensory epithelium that will develop into the mature macula.
ZFA:0001095
TAO:0001095
immature sensory patches
TAO:0001095
immature sensory patch
immature anterior macula
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
immature posterior macula
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
immature hair cell anterior macula
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
immature sensory hair cells anterior macula
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001098
immature sensory hair cells anterior macula
immature hair cell posterior macula
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
immature sensory hair cells posterior macula
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001099
immature sensory hair cells posterior macula
immature anterior otolith
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
immature posterior otolith
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete oocyte
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
egg
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001109
egg
urogenital papilla
A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed. Brion et al, 2004.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UGP
anal papilla
anal papillae
genital papilla
teleost_anatomy_curators
uberon/phenoscape-anatomy
urogenital papillae
true
TAO:0001118
UGP
A protuberance in front of the gential pore and behind the vent. Mature females have a well developed urogenital papillae whilst in mature males it is poorly developed. Brion et al, 2004.
ZFIN:curator
TAO:0001118
anal papilla
TAO:0001118
urogenital papillae
TAO:0001118
genital papilla
TAO:0001118
anal papillae
obsolete median fin skeleton
Postcranial axial skeleton that is unpaired and located on the sagittal plane of the organism.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000170
axial fin skeleton
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
unpaired fin skeleton
Postcranial axial skeleton that is unpaired and located on the sagittal plane of the organism.
TAO:wd
TAO:0001123
axial fin skeleton
TAO:0001123
unpaired fin skeleton
obsolete dorsal fin skeleton
Median fin skeleton located on the dorsal surface of the organism.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000168
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Median fin skeleton located on the dorsal surface of the organism.
TAO:wd
organizer inducing center
Nieuwkoop center
The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield. Ho et al, 1999.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Nieuwkoop center
TAO:0001125
The dorsal marginal region of the YSL where maternal dorsal determinants localize. Participates in positioning the shield. Ho et al, 1999.
ZFIN:curator
true
noninvoluting endocytic marginal cell cluster
NEM
The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution. Cooper et al, 1996.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
noninvoluting endocytic marginal cells
teleost_anatomy_curators
uberon/phenoscape-anatomy
The NEM cell cluster lies in a superficial position of the dorsal blastoderm margin encompassing EVL cells and one or two layers of underlying deep cells. Unlike other marginal blastomeres, cells in this cluster do not participate in involution. Cooper et al, 1996.
ZFIN:curator
TAO:0001126
noninvoluting endocytic marginal cells
NEM
TAO:0001126
true
pharyngeal pouches 2-6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral tooth row
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone.
mediodorsal tooth row
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, located between the dorsal tooth row and ventral tooth row.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, located between the dorsal tooth row and ventral tooth row.
dorsal tooth row
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone.
tooth 1V
1
Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row.
TAO:wd
true
tooth 5V
5
Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row.
TAO:wd
tooth 4V
4
Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row.
TAO:wd
tooth 2V
2
Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row.
TAO:wd
true
tooth 3V
3
Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row.
TAO:wd
true
true
tooth 1MD
1
Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row.
TAO:wd
true
tooth 2MD
2
Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row.
TAO:wd
tooth 1D
1
Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row.
TAO:wd
true
true
tooth 2D
2
Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row.
TAO:wd
true
true
tooth 4MD
4
Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row.
TAO:wd
tooth 3MD
3
Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row.
TAO:wd
true
true
anal fin musculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior lateral line placode
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior lateral line primordium
A migrating group of cells originating from the posterior lateral line placode. The primordium deposits seven to nine neuromasts and interneuromasts between them during its posterior migration to the tail. Gompel et al, 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior lateral line primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
A migrating group of cells originating from the posterior lateral line placode. The primordium deposits seven to nine neuromasts and interneuromasts between them during its posterior migration to the tail. Gompel et al, 2001.
ZFIN:curator
TAO:0001157
posterior lateral line primordia
dorsal scute
Scute that is a bony plate that forms in dorsal midline of body margin between the skull and dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scute that is a bony plate that forms in dorsal midline of body margin between the skull and dorsal fin.
TAO:wd
obsolete anal fin
Median fin that is located posterior to the anus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000163
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
nageoire anale
proctoptère
proctoptérygie
Median fin that is located posterior to the anus.
TAO:wd
PSPUB:0000136
proctoptère
PAPUB:0000142
PSPUB:0000140
proctoptérygie
PSPUB:0000164
nageoire anale
supraneural 7 bone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
supraneural 6 bone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sn6
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001164
sn6
supraneural 5 bone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sn5
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001165
sn5
supraneural 9 bone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vertebral element 1
1
vertebral element 2
2
Vertebra that is posteriorly adjacent to vertebra 1.
vertebral element 3
3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 2.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 2.
vertebral element 4
4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 5.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 5.
os suspensorium
Endochondral bone and Weberian ossicle that is an element of the fourth vertebra that curves ventrally around the anterior head of the swim bladder.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Weberian ossicle 5
fifth Weberian ossicle
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001171
Weberian ossicle 5
TAO:0001171
fifth Weberian ossicle
Endochondral bone and Weberian ossicle that is an element of the fourth vertebra that curves ventrally around the anterior head of the swim bladder.
ZFIN:curator
roofing cartilage
Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Bird and Mabee, 2003.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Bird and Mabee, 2003.
ZFIN:curator
epidermal superficial stratum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
epidermal intermediate stratum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dermal superficial region
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
stratum laxum
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001183
stratum laxum
true
collagenous dermal stroma
A layer of collagen fibrils present in the imature integument in an acellular subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region. Le Guellec et al, 2004.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
primary dermal stroma
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001186
primary dermal stroma
true
true
A layer of collagen fibrils present in the imature integument in an acellular subepidermal space. At first, the fibrils are all oriented in the same direction, later they form the complex plywood-like structure that is characteristic of the dermal deep region. Le Guellec et al, 2004.
ZFIN:curator
Weberian apparatus
Anatomical cluster that consists of the anteriormost vertebrae and associated structures that connect the swim bladder to the inner ear.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra 1-4, and sometimes vertebra 5 in some catfishes, are part of the Weberian apparatus. Weberian apparatus is present in Otophysi.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Anatomical cluster that consists of the anteriormost vertebrae and associated structures that connect the swim bladder to the inner ear.
ZFIN:curator
Weberian vertebra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is part of the Weberian apparatus.
Weberian vertebra are usually vertebra 1-4. Present in Otophysi.
Weberian vertebrae
teleost_anatomy_curators
uberon/phenoscape-anatomy
Vertebra that is part of the Weberian apparatus.
ZFIN:curator
TAO:0001190
Weberian vertebrae
supraneural 2 bone
In otophysans, supraneural 2 bone is part of the neural complex.
Supraneural bone located dorsal to vertebra 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
small supraneural
sn2
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:doi:10.1046/j.1096-3642.2002.00014.x
small supraneural
Supraneural bone located dorsal to vertebra 2.
ZFIN:curator
TAO:0001191
sn2
supraneural 3 bone
In otophysans, supraneural 3 bone is part of the neural complex and fuses in development with neural arches 3 and 4.
Supraneural bone that is located dorsal to vertebrae 3 and 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
large supraneural
sn3
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001192
sn3
TAO:doi:10.1046/j.1096-3642.2002.00014.x
large supraneural
Supraneural bone that is located dorsal to vertebrae 3 and 4.
ZFIN:curator
supraneural 8 bone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
corpuscles of Stannius
Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism.
ZFIN:curator
true
ventral lateral mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete ciliary body
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
basibranchial copula
Pharyngeal arch cartilage that is ventral, median, and associated with more than one pharyngeal arch in the pharyngeal arch 3-7 skeleton.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
copula
copulae
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001220
copulae
true
Pharyngeal arch cartilage that is ventral, median, and associated with more than one pharyngeal arch in the pharyngeal arch 3-7 skeleton.
ZFIN:curator
TAO:0001220
copula
anterior copula
Copula that is ventral, median, and associated with pharyngeal arches 3-5.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior basibranchial copula
copula 1
copula 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
Copula that is ventral, median, and associated with pharyngeal arches 3-5.
ZFIN:curator
TAO:0001221
copula 1
TAO:0001221
copula 2
TAO:0001221
anterior basibranchial copula
posterior copula
Copula that is ventral, median, and associated with branchial arches 4 and 5 (pharyngeal arches 6-7).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
copula 2
copula 3
posterior basibranchial copula
posterior copula
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001222
copula 3
TAO:0001222
posterior copula
TAO:0001222
posterior basibranchial copula
Copula that is ventral, median, and associated with branchial arches 4 and 5 (pharyngeal arches 6-7).
ZFIN:curator
TAO:0001222
copula 2
basibranchial 1 bone
Basibranchial bone that is ventral, median, and associated with branchial arch 1 (pharyngeal arch 3). Typically develops in the anterior copula cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Basibranchial bone that is ventral, median, and associated with branchial arch 1 (pharyngeal arch 3). Typically develops in the anterior copula cartilage.
ZFIN:curator
true
basibranchial 2 bone
Basibranchial bone that is ventral, median, and associated with branchial arch 2 (pharyngeal arch 4). Typically develops in the anterior copula cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Basibranchial bone that is ventral, median, and associated with branchial arch 2 (pharyngeal arch 4). Typically develops in the anterior copula cartilage.
ZFIN:curator
true
basibranchial 3 bone
Basibranchial bone that is ventral, median, and associated with branchial arch 3 (pharyngeal arch 5). Typically develops in the anterior copula cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Basibranchial bone that is ventral, median, and associated with branchial arch 3 (pharyngeal arch 5). Typically develops in the anterior copula cartilage.
ZFIN:curator
basibranchial 4 bone
Basibranchial bone that is ventral, median, and associated with branchial arch 4 (pharyngeal arch 6). Develops in posterior copula cartilage or basibranchial 4 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Basibranchial bone that is ventral, median, and associated with branchial arch 4 (pharyngeal arch 6). Develops in posterior copula cartilage or basibranchial 4 cartilage.
ZFIN:curator
pharyngeal arch 3 skeleton
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial arch 1
gill arch 1 skeleton
teleost_anatomy_curators
uberon/phenoscape-anatomy
visceral arch 3
true
TAO:0001228
visceral arch 3
TAO:0001228
branchial arch 1
TAO:0001228
gill arch 1 skeleton
pharyngeal arch 7 skeleton
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial arch 5 skeleton
gill arch 5 skeleton
teleost_anatomy_curators
uberon/phenoscape-anatomy
visceral arch 7 skeleton
TAO:0001229
branchial arch 5 skeleton
true
TAO:0001229
visceral arch 7 skeleton
TAO:0001229
gill arch 5 skeleton
pharyngeal arch 6 skeleton
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial arch 4 skeleton
gill arch 4 skeleton
teleost_anatomy_curators
uberon/phenoscape-anatomy
visceral arch 6 skeleton
TAO:0001230
gill arch 4 skeleton
TAO:0001230
visceral arch 6 skeleton
TAO:0001230
branchial arch 4 skeleton
true
pharyngeal arch 4 skeleton
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial arch 2 skeleton
gill arch 2 skeleton
teleost_anatomy_curators
uberon/phenoscape-anatomy
visceral arch 4 skeleton
TAO:0001231
gill arch 2 skeleton
true
TAO:0001231
visceral arch 4 skeleton
TAO:0001231
branchial arch 2 skeleton
pharyngeal arch 5 skeleton
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial arch 3 skeleton
gill arch 3 skeleton
teleost_anatomy_curators
uberon/phenoscape-anatomy
visceral arch 5 skeleton
TAO:0001232
branchial arch 3 skeleton
TAO:0001232
gill arch 3 skeleton
true
TAO:0001232
visceral arch 5 skeleton
hypobranchial 1 bone
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 1 element laterally. Develops in hypobranchial 1 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 1 element laterally. Develops in hypobranchial 1 cartilage.
ZFIN:curator
hypobranchial 4 bone
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 4 element laterally. Develops in hypobranchial 4 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 4 element laterally. Develops in hypobranchial 4 cartilage.
ZFIN:curator
hypobranchial 3 bone
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 3 element laterally. Develops in hypobranchial 3 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 3 element laterally. Develops in hypobranchial 3 cartilage.
ZFIN:curator
hypobranchial 2 bone
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 2 element laterally. Develops in hypobranchial 2 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial bone that is bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 2 element laterally. Develops in hypobranchial 2 cartilage.
ZFIN:curator
ceratobranchial 1 bone
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone.
ZFIN:curator
ceratobranchial 5 bone
Ceratobranchial bone that is the most posterior, bilaterally paired ventral pharyngeal arch bone.
Synonym 'lower pharyngeal' from Weitzman, 1962.
Synonym 'inferior pharyngeal bone' from Saxena, S.C. (1960). The cranial musculature of a hill-stream cyprinid fish Garra mullya (Sykes). Proceedings of the National Institute of Science in India. 26B(4): 176-188.
Synonym 'pharyngeal arch' from Eastman, J.T. (1971). The pharyngeal bone musculature of the carp, Cyprinus carpio. Journal of Morphology. 134(2): 131-140.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
inferior pharyngeal bone
lower pharyngeal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001239
inferior pharyngeal bone
Ceratobranchial bone that is the most posterior, bilaterally paired ventral pharyngeal arch bone.
ZFIN:curator
TAO:0001239
lower pharyngeal
ceratobranchial 4 bone
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone.
ZFIN:curator
ceratobranchial 3 bone
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone.
ZFIN:curator
ceratobranchial 2 bone
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial bone that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone.
ZFIN:curator
epibranchial 1 bone
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and medially with pharyngobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and medially with pharyngobranchial cartilage or bone.
ZFIN:curator
epibranchial 5 cartilage
Epibranchial cartilage that is bilaterally paired and located at the articulation of epibranchial 4 cartilage or bone and the posterior tip of ceratobranchial 4 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
accessory cartilage
interbranchial
interbranchial IV
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001244
interbranchial IV
TAO:0001244
accessory cartilage
TAO:0001244
interbranchial
Epibranchial cartilage that is bilaterally paired and located at the articulation of epibranchial 4 cartilage or bone and the posterior tip of ceratobranchial 4 cartilage or bone.
ZFIN:curator
epibranchial 4 bone
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and medially with pharyngobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and medially with pharyngobranchial cartilage or bone.
ZFIN:curator
epibranchial 2 bone
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and medially with pharyngobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and medially with pharyngobranchial cartilage or bone.
ZFIN:curator
epibranchial 3 bone
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and medially with pharyngobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial bone that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and medially with pharyngobranchial cartilage or bone.
ZFIN:curator
dorsal scute series
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pharyngobranchial 2 bone
Pharyngobranchial bone, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngobranchial bone, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.
ZFIN:curator
TAO:0001250
infrapharyngobranchial 2
pharyngobranchial 4 cartilage
Most posterior pharyngobranchial cartilage, located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 4 cartilage
infrapharyngobranchials
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001251
infrapharyngobranchials
Most posterior pharyngobranchial cartilage, located medial to the epibranchials.
ZFIN:curator
TAO:0001251
infrapharyngobranchial 4 cartilage
pharyngobranchial 3 bone
Pharyngobranchial bone, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 3
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001252
infrapharyngobranchial 3
Pharyngobranchial bone, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.
TAO:wd
neural arch 2
Neural arch that is the second after the neurocranium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural arch that is the second after the neurocranium.
TAO:wd
abdominal scute series
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
abdominal scutes
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001254
abdominal scutes
lateral floor plate
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
medial floor plate
The medial portion of the spinal cord floor plate, located adjacent to the notochord.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The medial portion of the spinal cord floor plate, located adjacent to the notochord.
ZFIN:curator
true
true
true
forebrain ventricle
This class was obsoleted as it was discovered to be equivalent to an existing class
forebrain vesicle
prosencephalic ventricle
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
UBERON:0006284
TAO:0001259
forebrain vesicle
TAO:0001259
prosencephalic ventricle
ovarian follicle stage I
Stage I follicles (less than 140 microns) are primary growth stage. Selman et al, 1993.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
previtillogenic ovarian follicle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001263
previtillogenic ovarian follicle
Stage I follicles (less than 140 microns) are primary growth stage. Selman et al, 1993.
ZFIN:curator
ovarian follicle stage II
Stage II follicles (140-340 microns) are cortical alveolus stage. Selman et al, 1993.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Stage II follicles (140-340 microns) are cortical alveolus stage. Selman et al, 1993.
ZFIN:curator
ovarian follicle stage III
Stage III (340-690 microns) are vitellogenesis. Selman et al, 1993.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Stage III (340-690 microns) are vitellogenesis. Selman et al, 1993.
ZFIN:curator
coronomeckelian
Tendon bone located on the median side of the lower jaw, dorsal to Meckel's cartilage and medial to the angular. The coronomeckelian forms as an ossification of the tendon of the adductor mandibulae muscle. The coronomeckelian is a paired bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sesamoid articular
sesamoid coronoid
teleost_anatomy_curators
uberon/phenoscape-anatomy
Tendon bone located on the median side of the lower jaw, dorsal to Meckel's cartilage and medial to the angular. The coronomeckelian forms as an ossification of the tendon of the adductor mandibulae muscle. The coronomeckelian is a paired bone.
ZFIN:curator
true
TAO:0001274
sesamoid coronoid
TAO:0001274
sesamoid articular
true
true
sublingual
Endochondral bone that is the median element of the ventral hyoid arch, generally lying between the paired ventral hypohyals.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Endochondral bone that is the median element of the ventral hyoid arch, generally lying between the paired ventral hypohyals.
TAO:je
anterior chamber swim bladder
The anterior compartment of the swim bladder is thought to have acoustic resonance properties that play a key role in audition. It is connected to the posterior chamber via the dusctus communicans. Finney et al, 2006.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The anterior compartment of the swim bladder is thought to have acoustic resonance properties that play a key role in audition. It is connected to the posterior chamber via the dusctus communicans. Finney et al, 2006.
ZFIN:curator
posterior chamber swim bladder
The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the dusctus communicans. Finney et al, 2006.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the dusctus communicans. Finney et al, 2006.
ZFIN:curator
branchiostegal ray 1
Branchiostegal ray that is the anterior-most ray in the adult.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Branchiostegal ray that is the anterior-most ray in the adult.
ZFIN:curator
branchiostegal ray 3
Branchiostegal ray that is the third anterior-most ray in the adult.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Branchiostegal ray that is the third anterior-most ray in the adult.
ZFIN:curator
branchiostegal ray 2
Branchiostegal ray that is the second anterior-most ray in the adult.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Branchiostegal ray that is the second anterior-most ray in the adult.
ZFIN:curator
intersegmental vessel
Se
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
intersegmental vessels
intersomitic vessels
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
TAO:0001285
intersegmental vessels
Se
TAO:0001285
TAO:0001285
intersomitic vessels
caudal vein plexus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior kidney
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
vagal placode 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vagal placode 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vagal placode 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vagal placode 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vagal ganglion 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gX1
nodose ganglion 1
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001302
gX1
TAO:0001302
nodose ganglion 1
vagal ganglion 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gX2
nodose ganglion 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001303
gX2
TAO:0001303
nodose ganglion 2
vagal ganglion 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gX3
nodose ganglion 3
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001304
gX3
TAO:0001304
nodose ganglion 3
vagal ganglion 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
gX4
nodose ganglion 4
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001305
gX4
TAO:0001305
nodose ganglion 4
ventral anterior lateral line ganglion
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anteroventral lateral line ganglion
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001313
anteroventral lateral line ganglion
posterior lateral line ganglion
The posterior lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the posterior lateral line system.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The posterior lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the posterior lateral line system.
ZFIN:curator
true
dorsoventral diencephalic tract
A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure. Ross et al, 1992.
DVDT
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
A tract originating in the epiphysis and fasiculating with the tract of the postoptic commissure. Ross et al, 1992.
ZFIN:curator
DVDT
TAO:0001322
enteric musculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
sublingual dorsal and ventral fused
Sublingual that is the single element resulting from the fusion of the sublingual dorsal ossification and sublingual ventral ossification.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Sublingual that is the single element resulting from the fusion of the sublingual dorsal ossification and sublingual ventral ossification.
TAO:wd
supradorsal
Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Supradorsals are small paired nodules of cartilage positioned at the distal ends of neural arches and the proximal end of neural spines (Arratia et al., 2001).
ZFIN:curator
obsolete spermatogonia
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
nucleus of the tract of the anterior commissure
Telencephalic nucleus containing the cell bodies of neurons whose axons form the anterior commissure.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ntAC
teleost_anatomy_curators
uberon/phenoscape-anatomy
Telencephalic nucleus containing the cell bodies of neurons whose axons form the anterior commissure.
ZFIN:curator
TAO:0001339
ntAC
nucleus of the tract of the postoptic commissure
The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ntPOC
teleost_anatomy_curators
uberon/phenoscape-anatomy
The nucleus containing the cell bodies of neurons whose axons form the postoptic commissure.
ZFIN:curator
TAO:0001340
ntPOC
intervening zone
A zone of delayed differentiation at the midbrainhindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates. Geling et al, 2003.
IZ
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
A zone of delayed differentiation at the midbrainhindbrain boundary. The IZ separates midbrain from anterior hindbrain neuronal clusters and has been described in all vertebrates. Geling et al, 2003.
ZFIN:curator
IZ
TAO:0001341
presumptive intervening zone
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
telencephalon diencephalon boundary
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
stratum fibrosum et griseum superficiale
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
stratum marginale
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
stratum opticum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
stratum periventriculare
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete mesencephalic tegmentum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
alar plate midbrain
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
pineal complex
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
parapineal organ
An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry. Gamse et al, 2003.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry. Gamse et al, 2003.
ZFIN:curator
true
basiventral
Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
arcualia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001361
arcualia
Basiventrals are bilaterally paired cartilages lateral to the notochord which are replaced by ossified parapophyses or hemal arches.
ZFIN:curator
neural complex
Anatomical cluster that consists of supraneural 2 bone and supraneural 3 bone and their extensions, and which is part of the Weberian apparatus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2001398
Weberian supraneural
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that consists of supraneural 2 bone and supraneural 3 bone and their extensions, and which is part of the Weberian apparatus.
ZFIN:curator
true
TAO:0001363
Weberian supraneural
hemal spine
Hemal spines are extensions of hemal arches in the ventral skeletogenous septum of the caudal region.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haemal spine
teleost_anatomy_curators
uberon/phenoscape-anatomy
haemacanthe
hémacanthe
épine hémale
PSPUB:0000143
hémacanthe
PSPUB:0000115
haemacanthe
Hemal spines are extensions of hemal arches in the ventral skeletogenous septum of the caudal region.
ZFIN:curator
true
true
PSPUB:0000164
épine hémale
TAO:0001364
haemal spine
tract of the postoptic commissure
TPOC
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001366
TPOC
pancreatic system
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete migratory slow muscle precursor cell
Cells that initially are located adjacent to the spinal cord and notochord along that migrate from their initial medial position radially through the myotome to the lateral surface of the somites.
likely very zebrafish specific so being obsoleted for now.
migratory slow muscle precursor cells
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001373
migratory slow muscle precursor cells
Cells that initially are located adjacent to the spinal cord and notochord along that migrate from their initial medial position radially through the myotome to the lateral surface of the somites.
ZFIN:curator
axial hypoblast
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
pharyngeal ectoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
epibranchial bone uncinate process
Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Epibranchials 1-3 in adults are compound elements formed by the fusion of epibranchial cartilages and the so-called uncinate processes. Posteromedially directed uncinate processes develop on the posterior edge of epibranchials 1-3. These appear as separate centers of chondrification (6.2 mm) that later fuse laterally to the posterior edges of the epibranchial cartilages (6.8 mm).
ZFIN:curator
parapophysis 1
Parapophysis that is the lateral projections from the first centrum in cyprinids, absent in catostomids, and absent in characiphysans (Fink and Fink, 1996).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basipophysis 1
lateral process 1
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001392
lateral process 1
Parapophysis that is the lateral projections from the first centrum in cyprinids, absent in catostomids, and absent in characiphysans (Fink and Fink, 1996).
ZFIN:curator
TAO:0001392
basipophysis 1
true
parapophysis 2
Parapophysis that is lateral projection from the second centrum, absent in Siluriformes (Fink and Fink, 1996).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basipophysis
lateral process 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001393
lateral process 2
Parapophysis that is lateral projection from the second centrum, absent in Siluriformes (Fink and Fink, 1996).
ZFIN:curator
TAO:0001393
basipophysis
neural arch 3
Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal.
ZFIN:curator
neural arch 4
Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex.
ZFIN:curator
parapophysis + rib of vertebra 4
The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fourth pleural rib plus parapophysis
fourth rib plus parapophysis
parapophysis/rib
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001396
parapophysis/rib
TAO:0001396
fourth pleural rib plus parapophysis
true
TAO:0001396
fourth rib plus parapophysis
The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface.
ZFIN:curator
post-Weberian supraneural
Posterior to the Weberian apparatus, otophysan supraneurals form as median, unpaired, rod- or platelike elements, as in other actinopterygians.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Posterior to the Weberian apparatus, otophysan supraneurals form as median, unpaired, rod- or platelike elements, as in other actinopterygians.
ZFIN:curator
supraethmoid
Dermal bone that first appears as paired ossifications in the membrane (dermis) dorsolateral to the ethmoid cartilage and anterolateral to the lateral ethmoids, later having the appearance of one butterfly-shaped element. Fused to the anterodorsal margin of the mesethmoid. Bordered anteriorly by the kinethmoid and posteriorly by the frontal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Dermal bone that first appears as paired ossifications in the membrane (dermis) dorsolateral to the ethmoid cartilage and anterolateral to the lateral ethmoids, later having the appearance of one butterfly-shaped element. Fused to the anterodorsal margin of the mesethmoid. Bordered anteriorly by the kinethmoid and posteriorly by the frontal.
TAO:GA_TG
preethmoid bone
Small rounded to egg-shaped cartilage bone that sits in an anterolateral depression on the prevomer. Articulates with the autopalatine in all cypriniforms.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small rounded to egg-shaped cartilage bone that sits in an anterolateral depression on the prevomer. Articulates with the autopalatine in all cypriniforms.
ZFIN:curator
true
true
kinethmoid bone
Sesamoid bone located in the premaxillary-ethmoid ligament, between the mesethmoid and the premaxilla. The kinethmoid is an unpaired median bone.
The kinethmoid is part of the protrusion mechanism of the upper jaw and is restricted to cypriniform fishes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
kinethmoideum bone
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sesamoid bone located in the premaxillary-ethmoid ligament, between the mesethmoid and the premaxilla. The kinethmoid is an unpaired median bone.
TAO:GA_TG
ZFIN:curator
TAO:0001406
kinethmoideum bone
true
infraorbital 2
Infraorbital that is the second bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the second bone of the infraorbital series.
ZFIN:curator
infraorbital 3
Infraorbital that is the third bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the third bone of the infraorbital series.
ZFIN:curator
infraorbital 4
Infraorbital that is the fourth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the fourth bone of the infraorbital series.
ZFIN:curator
epiotic
Endochondral bone that borders that medial edge of the posttemporal fossa. The epiotics are sutured to parietals and supraoccipital dorsally, the exoccipitals ventrally and the pterotics laterally. The epiotic is a paired bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000659
epioccipital
epioccipitals
teleost_anatomy_curators
uberon/phenoscape-anatomy
Endochondral bone that borders that medial edge of the posttemporal fossa. The epiotics are sutured to parietals and supraoccipital dorsally, the exoccipitals ventrally and the pterotics laterally. The epiotic is a paired bone.
ZFIN:curator
TAO:0001412
epioccipitals
true
true
TAO:0001412
epioccipital
pelvic fin distal radial 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin distal radial 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin distal radial 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete dorsal fin lepidotrichium
Lepidotrichium which is part of the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000177
dorsal fin lepidotrichia
dorsal fin ray
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001418
dorsal fin lepidotrichia
Lepidotrichium which is part of the dorsal fin.
ZFIN:curator
TAO:0001418
dorsal fin ray
dorsal fin pterygiophore
A range of seven to nine rod-like internal median skeletal support structures of the dorsal fin, comprised of both bone and cartilage and found between vertebrae 11 and 18.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal fin pterygiophores
dorsal fin support
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001419
dorsal fin support
TAO:0001419
dorsal fin pterygiophores
A range of seven to nine rod-like internal median skeletal support structures of the dorsal fin, comprised of both bone and cartilage and found between vertebrae 11 and 18.
ZFIN:curator
anal fin pterygiophore
A range of twelve to fourteen rod-like internal median skeletal support structures of the anal fin, comprised of both bone and cartilage and found between vertebrae 14 and 21.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin pterygiophores
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001420
anal fin pterygiophores
A range of twelve to fourteen rod-like internal median skeletal support structures of the anal fin, comprised of both bone and cartilage and found between vertebrae 14 and 21.
ZFIN:curator
obsolete anal fin lepidotrichium
Lepidotrichium which is part of the anal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000176
anal fin lepidotrichia
anal fin ray
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001421
anal fin ray
Lepidotrichium which is part of the anal fin.
ZFIN:curator
TAO:0001421
anal fin lepidotrichia
basal plate cartilage
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior naris
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior nostril
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001426
posterior nostril
anterior naris
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior nostril
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001427
anterior nostril
olfactory rosette
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
nasal rosette
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001428
nasal rosette
true
pneumatic duct
A duct connecting the esophagus to the posterior chamber of the swim bladder. Finney et al, 2006.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
A duct connecting the esophagus to the posterior chamber of the swim bladder. Finney et al, 2006.
ZFIN:curator
primitive olfactory epithelium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
anterior sclerotic bone
Sclerotic bone that is located anterior to the eye.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sclerotic bone that is located anterior to the eye.
TAO:wd
posterior sclerotic bone
Sclerotic bone that is located posterior to the eye.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sclerotic bone that is located posterior to the eye.
TAO:wd
ductus communicans
The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening. Finney et al, 2006.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening. Finney et al, 2006.
ZFIN:curator
apical ectodermal ridge pelvic fin
Apical ectodermal ridge that is part of the pelvic fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Apical ectodermal ridge that is part of the pelvic fin.
ZFIN:curator
true
pectoral fin endoskeletal disc
A plate-like chondrogenic condensation within the pectoral fin, which subdivides into individual radials by decomposition of extracellular matrix in the inter-radial mesenchyme (Grandel and Schulte-Merker, 1998).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fin plate cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001456
fin plate cartilage
A plate-like chondrogenic condensation within the pectoral fin, which subdivides into individual radials by decomposition of extracellular matrix in the inter-radial mesenchyme (Grandel and Schulte-Merker, 1998).
ZFIN:curator
postcranial axial cartilage
Cartilage which is part of the axial skeleton.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cartilage which is part of the axial skeleton.
ZFIN:curator
true
somite border
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
somite border cell
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001462
somite border cell
melanophore stripe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
stripe
stripes
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001463
stripes
TAO:0001463
stripe
pharyngeal mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
posterior lateral line system
The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.
ZFIN:curator
anterior lateral line neuromast
Neuromast that is part of the anterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neuromast anterior
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neuromast that is part of the anterior lateral line. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)
ZFIN:curator
TAO:0001472
neuromast anterior
obsolete deep blastomere
Cells (completely cleaved), located underneath the superficial blastomeres and internal to the marginal blastomeres. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ZFA:0001473
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Cells (completely cleaved), located underneath the superficial blastomeres and internal to the marginal blastomeres. Kimmel et al, 1995.
ZFIN:curator
sublingual dorsal and ventral separate
Anatomical cluster consisting of the paired sublingual dorsal ossification and sublingual ventral ossification.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster consisting of the paired sublingual dorsal ossification and sublingual ventral ossification.
TAO:wd
sublingual dorsal ossification
Sublingual that is the dorsal element paired with the sublingual ventral ossification.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sublingual that is the dorsal element paired with the sublingual ventral ossification.
TAO:wd
true
sublingual ventral ossification
Sublingual that is the ventral element paired with the sublingual dorsal ossification.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Sublingual that is the ventral element paired with the sublingual dorsal ossification.
TAO:wd
dorsal anterior lateral line nerve
Nerve fibers originating from the dorsal anterior lateral line ganglion. These rami innervate the otic, supraorbital, and infraorbital neuromasts.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Nerve fibers originating from the dorsal anterior lateral line ganglion. These rami innervate the otic, supraorbital, and infraorbital neuromasts.
ZFIN:curator
ventral anterior lateral line nerve
Nerve fibers originating from the ventral anterior lateral line ganglion. These rami innervate the mandibular and opercular neuromasts.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Nerve fibers originating from the ventral anterior lateral line ganglion. These rami innervate the mandibular and opercular neuromasts.
ZFIN:curator
middle lateral line nerve
Nerve fibers originating from the middle lateral line ganglion. These fibers innervate the middle lateral line.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Nerve fibers originating from the middle lateral line ganglion. These fibers innervate the middle lateral line.
ZFIN:curator
middle lateral line ganglion
The middle lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the middle lateral line.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The middle lateral line ganglion develops from a cranial ectodermal placode and contains sensory neurons that innervate the middle lateral line.
ZFIN:curator
obsolete superficial blastomere
Cells (completely cleaved), located at the surface of the blastodisc, above the deep blastomeres. Kimmel et al, 1995.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ZFA:0001484
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Cells (completely cleaved), located at the surface of the blastodisc, above the deep blastomeres. Kimmel et al, 1995.
ZFIN:curator
epiphyseal bar
Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar.
ZFIN:curator
occipital arch cartilage
Cranial cartilage which is a paired anterodorsal projection of the posterior end of the parachordal cartilage. It lies lateral to the notochord, just anterior to the posterior tip of the otic capsule. The bilaterally paired occipital arch cartilages fuse anterodorsally to the posterior edges of the auditory capsules and meet medially as the tectum synoticum (by 12 dpf).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cranial cartilage which is a paired anterodorsal projection of the posterior end of the parachordal cartilage. It lies lateral to the notochord, just anterior to the posterior tip of the otic capsule. The bilaterally paired occipital arch cartilages fuse anterodorsally to the posterior edges of the auditory capsules and meet medially as the tectum synoticum (by 12 dpf).
ZFIN:curator
taenia marginalis anterior
Cartilage bar (bilaterally paired) that grows anteroventrally from the epiphyseal bar to join the anterolatera1 edge of the ethmoid plate.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
orbital cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001505
orbital cartilage
true
Cartilage bar (bilaterally paired) that grows anteroventrally from the epiphyseal bar to join the anterolatera1 edge of the ethmoid plate.
ZFIN:curator
trabecula communis
Cartilage formed via medial fusion between bilaterally paired trabecula crani.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cartilage formed via medial fusion between bilaterally paired trabecula crani.
ZFIN:curator
true
interhyal cartilage
It articulates ventrally with the posterior end of the ceratohyal cartilage or the posterior ceratohyal.
Pharyngeal arch cartilage that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000218
stylohyal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001511
stylohyal
Pharyngeal arch cartilage that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.
ZFIN:curator
taenia marginalis posterior
Cartilage bar (bilaterally paired) that is first visible as an anterior extension of the auditory capsule. It grows anteriorly toward the middle of the orbit where it is connected to its mate on the other side by the epiphyseal bar.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
orbital cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001515
orbital cartilage
true
Cartilage bar (bilaterally paired) that is first visible as an anterior extension of the auditory capsule. It grows anteriorly toward the middle of the orbit where it is connected to its mate on the other side by the epiphyseal bar.
ZFIN:curator
ceratobranchial cartilage
Pharyngeal arch cartilage that forms the largest skeletal element of the ventral branchial arches.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that forms the largest skeletal element of the ventral branchial arches.
ZFIN:curator
ceratobranchial 2 cartilage
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone.
ZFIN:curator
ceratobranchial 3 cartilage
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone.
ZFIN:curator
ceratobranchial 4 cartilage
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone.
ZFIN:curator
ceratobranchial 1 cartilage
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 1 cartilage or bone.
ZFIN:curator
ceratobranchial 5 cartilage
Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage.
ZFIN:curator
hypobranchial cartilage
Pharyngeal arch cartilage that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial cartilage or bone.
The hypobranchial cartilage usually articulates medially with a basibranchial bone or cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial cartilage or bone.
ZFIN:curator
hypobranchial 4 cartilage
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone.
ZFIN:curator
hypobranchial 1 cartilage
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone.
ZFIN:curator
hypobranchial 2 cartilage
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone.
ZFIN:curator
hypobranchial 3 cartilage
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hypobranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone.
ZFIN:curator
epibranchial cartilage
Pharyngeal arch cartilage that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that is bilaterally paired and articulates laterally with ceratobranchial cartilage or bone.
TAO:wd
epibranchial 1 cartilage
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone.
ZFIN:curator
epibranchial 3 cartilage
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone.
ZFIN:curator
epibranchial 2 cartilage
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone.
ZFIN:curator
epibranchial 4 cartilage
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone.
ZFIN:curator
sublingual dorsal cartilage
Sublingual cartilage that is the dorsal element paired with the sublingual ventral cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sublingual cartilage that is the dorsal element paired with the sublingual ventral cartilage.
TAO:wd
pharyngobranchial cartilage
Paired cartilages that project medially from the medial tips of epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Paired cartilages that project medially from the medial tips of epibranchials.
ZFIN:curator
pharyngobranchial 3 cartilage
Pharyngobranchial cartilage, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngobranchial cartilage, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.
ZFIN:curator
median fin cartilage
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pharyngobranchial 2 cartilage
Pharyngobranchial cartilage, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngobranchial cartilage, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.
ZFIN:curator
mesocoracoid cartilage
Pectoral fin cartilage that is part of the embryonic primary pectoral girdle from which the mesocoracoid bone will ossify endochondrally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesocoracoideum
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin cartilage that is part of the embryonic primary pectoral girdle from which the mesocoracoid bone will ossify endochondrally.
TAO:GA_TG
ZFIN:curator
TAO:0001537
mesocoracoideum
pelvic radial cartilage
Small cartilage that forms at the posterior edge of the basipterygium.
TO DO: reconcile cartilage elements of fin with bony elements (e.g. develops from and labeling).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small cartilage that forms at the posterior edge of the basipterygium.
ZFIN:curator
basipterygium cartilage
Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962).
ZFIN:curator
pelvic radial 3 cartilage
Small cartilage that forms at the posterior and medial edge of the basipterygium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small cartilage that forms at the posterior and medial edge of the basipterygium.
ZFIN:curator
pelvic radial 2 cartilage
Small cartilage with a long posterior process and a shorter lateral one that forms at the posterior edge of the basipterygium, between radial cartilages 1 and 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small cartilage with a long posterior process and a shorter lateral one that forms at the posterior edge of the basipterygium, between radial cartilages 1 and 2.
ZFIN:curator
pelvic radial 1 cartilage
Small cartilage that forms at the posterior and lateral edge of the basipterygium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Small cartilage that forms at the posterior and lateral edge of the basipterygium.
ZFIN:curator
sublingual cartilage
Pharyngeal arch cartilage that is the median cartilage of the ventral hyoid arch, generally lying between the paired ventral hypohyals.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that is the median cartilage of the ventral hyoid arch, generally lying between the paired ventral hypohyals.
TAO:wd
sublingual ventral cartilage
Sublingual cartilage that is the ventral element paired with the sublingual dorsal cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sublingual cartilage that is the ventral element paired with the sublingual dorsal cartilage.
TAO:wd
neural spine 4
Neural spine that is associated with the fourth vertebra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural spine that is associated with the fourth vertebra.
TAO:wd
abdominal scute
Scute that is a bony plate that forms in the midline of ventral body margin between pectoral girdle and anal fin. Abdominal scutes may be present both anterior to and posterior to the pelvic girdle and fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scute that is a bony plate that forms in the midline of ventral body margin between pectoral girdle and anal fin. Abdominal scutes may be present both anterior to and posterior to the pelvic girdle and fin.
TAO:wd
intercalarium ascending process
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete caudal fin lepidotrichium
Lepidotrichium which is part of the caudal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000174
caudal fin ray
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Lepidotrichium which is part of the caudal fin.
ZFIN:curator
TAO:0001550
caudal fin ray
obsolete pectoral fin lepidotrichium
Each pectoral lepidotrichium may be unsegmented (e.g., spine), segmented but unbranched (e.g., leading ray) or segmented and branched. Definition of lepidotrichium by Schultze and Arratia (1989: 217). For additional information about lepidotrichia see Arratia et al. 2001 and Arratia 2008.
Lepidotrichium which is part of the pectoral fin, forming the pectoral fin skeleton and articulating with the pectoral radials. A pectoral lepidotrichium is composed of two hemitrichia that surround bundles of actinotrichia distally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000175
pectoral fin lepidotrichia
pectoral fin ray
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Lepidotrichium which is part of the pectoral fin, forming the pectoral fin skeleton and articulating with the pectoral radials. A pectoral lepidotrichium is composed of two hemitrichia that surround bundles of actinotrichia distally.
TAO:GA_TG
ZFIN:curator
TAO:0001551
pectoral fin lepidotrichia
TAO:0001551
pectoral fin ray
obsolete pelvic fin lepidotrichium
Lepidotrichium which is part of the pelvic fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000173
pelvic fin lepidotrichia
pelvic fin ray
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Lepidotrichium which is part of the pelvic fin.
ZFIN:curator
TAO:0001552
pelvic fin ray
TAO:0001552
pelvic fin lepidotrichia
manubrium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
intercalarium anterior process
intercalarium horizontal process
manubrium incudus
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
TAO:Bird 2003
manubrium incudus
true
TAO:Fink and Fink 1981
intercalarium horizontal process
TAO:Bird and Mabee 2003
intercalarium anterior process
obsolete lepidotrichium
Dermal bone that is rod-like, formed and usually contained in a fin membrane, and jointed to or adjacent to distal radials. Lepidotrichia are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:4000172
fin ray
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001554
fin ray
Dermal bone that is rod-like, formed and usually contained in a fin membrane, and jointed to or adjacent to distal radials. Lepidotrichia are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials.
ZFIN:curator
hypural 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
hypural 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
hypural 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
hypural 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
hypural 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete oocyte stage II
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete oocyte stage III
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete oocyte stage I
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete oocyte stage IV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete oocyte stage V
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mature egg
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
unactivated egg
TAO:0001569
mature egg
TAO:0001569
unactivated egg
obsolete unfertilized egg
activated oocyte
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001570
activated oocyte
postovulatory follicle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
premaxilla ascending process
Process of the premaxilla that extends posteriorly and overlays the mesethmoid.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process of the premaxilla that extends posteriorly and overlays the mesethmoid.
ZFIN:curator
true
true
true
anterior dorsomedial process of autopalatine
In cypriniforms the anterior portion of the palatine has a dorsomedial process which abuts against the mesethmoid. Such a process is not present in other ostariophysans or in other primitive teleosts.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
In cypriniforms the anterior portion of the palatine has a dorsomedial process which abuts against the mesethmoid. Such a process is not present in other ostariophysans or in other primitive teleosts.
ZFIN:curator
true
true
true
ural vertebra 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ural vertebra that is the second vertebra posterior to preural centrum 1. It may bear a rudimentary neural arch and sometimes a rudimentary spine or the neural arch and spine are completely absent and it may articulate or fuse with hypural 2 (polyural terminology). Ural vertebra 2 is an unpaired median bone.
Ural vertebrae 2 may be defined also as the second ural vertebrae bearing hypurals 3 or 3 and 4 or 3 plus more dorsal hypurals (diural terminology).
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:GA_TG
Ural vertebra that is the second vertebra posterior to preural centrum 1. It may bear a rudimentary neural arch and sometimes a rudimentary spine or the neural arch and spine are completely absent and it may articulate or fuse with hypural 2 (polyural terminology). Ural vertebra 2 is an unpaired median bone.
ural centrum 2
A vertebral centrum that is located immediately posterior to ural centrum 1. Ural centrum 2 is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ural centrum 2 (polyural terminology) may articulate or fuse with its neural arch dorsally or the neural arch may be absent, and with hypural 2 ventrally. Ural centrum 2 may be defined also as the second ural centrum bearing hypurals 3 or 3 and 4 or 3, 4 and more dorsal hypurals (diural terminology).
teleost_anatomy_curators
uberon/phenoscape-anatomy
A vertebral centrum that is located immediately posterior to ural centrum 1. Ural centrum 2 is an unpaired median bone.
TAO:GA_TG
true
true
non-Weberian precaudal vertebra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
preural centrum 1+ ural centrum 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Urostyle that is the result of fusion of preural centrum 1 with the first ural centrum (of polyural terminology).
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:GA_TG
Urostyle that is the result of fusion of preural centrum 1 with the first ural centrum (of polyural terminology).
caudal procurrent ray
Caudal fin lepidotrichium that form part of the anterior dorsal and ventral series of lepidotrichia of the caudal fin that may be associated with a neural spine or an epural or an uroneural (dorsal series) and with a haemal spine of a preural vertebra (ventral series). Caudal procurrent rays are shorter than the caudal principal rays. A caudal procurrent ray is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal precurrent ray
caudal procurrent lepidotrichium
caudal spiny ray
rudimentary ray
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001584
caudal spiny ray
TAO:0001584
caudal precurrent ray
TAO:0001584
rudimentary ray
Caudal fin lepidotrichium that form part of the anterior dorsal and ventral series of lepidotrichia of the caudal fin that may be associated with a neural spine or an epural or an uroneural (dorsal series) and with a haemal spine of a preural vertebra (ventral series). Caudal procurrent rays are shorter than the caudal principal rays. A caudal procurrent ray is an unpaired median bone.
TAO:Arratia_2008
TAO:GA_TG
TAO:0001584
caudal procurrent lepidotrichium
caudal principal ray
Caudal fin lepidotrichium that is adjacent to a branched ray. Caudal principal rays may be segmented but unbranched and the main element forming the dorsal or ventral leading margin of the caudal fin or a ray that may be only segmented-and-branched and forms part of the middle-posterior region of the fin. A caudal principal ray is an unpaired median bone.
Counts of caudal principal rays are taken as the number of branched rays plus two adjacent unbranched rays and counts are typically reported as, for example: 1,8,7,1 (1 unbranched and 8 branched upper rays, 7 branched and 1 unbranched lower rays). A caudal principal caudal ray may be associated with one or more hypurals or with hemal spines of preural centra 1 and 2 (Schultze and Arratia, 1989; Arratia, 2008). In basal teleosts the number of caudal principal rays is about 20. A decreasing of the number of the branched-and segmented rays is observed in more advanced teleosts (see Schultze and Arratia, 1989; Arratia, 1991, 2008).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin principal ray
caudal principal lepidotrichium
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001585
caudal principal lepidotrichium
TAO:0001585
caudal fin principal ray
Caudal fin lepidotrichium that is adjacent to a branched ray. Caudal principal rays may be segmented but unbranched and the main element forming the dorsal or ventral leading margin of the caudal fin or a ray that may be only segmented-and-branched and forms part of the middle-posterior region of the fin. A caudal principal ray is an unpaired median bone.
TAO:GA_TG
TAO:wd
pectoral fin radial
Pectoral fin radials are the internal skeletal supports of the pectoral fin which develop from the pectoral fin endoskeletal disc, supports the pectoral lepidotrichia or fin rays and connects the lepidotrichia with the primary pectoral girdle.
There are two paired series of pectoral radials, the proximal and the distal ones that may have variable shapes and sizes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral actinost
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin radials are the internal skeletal supports of the pectoral fin which develop from the pectoral fin endoskeletal disc, supports the pectoral lepidotrichia or fin rays and connects the lepidotrichia with the primary pectoral girdle.
TAO:GA_TG
true
TAO:0001586
pectoral actinost
pectoral fin proximal radial
Pectoral fin radial which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radials with the primary pectoral girdle (scapula and coracoid).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Two to four flat or slightly rod-like proximal pectoral radials, bilaterally, can be found in teleosts. Pectoral proximal radials are commonly hour-glass or rectangular shaped. The presence of four pectoral proximal radials is interpreted as a synapomorphy of teleosts (Patterson 1977, Arratia 1999).
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin radial which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radials with the primary pectoral girdle (scapula and coracoid).
TAO:GA_TG
pectoral fin distal radial
A variable number of pectoral distal radials may be present in each pectoral fin. They are commonly small elements, rod-like, round or square shaped.
Pectoral fin radial that sometimes ossifies, develops from the pectoral fin endoskeletal disc, and is located at the proximal region of a lepidotrichium, between its hemitrichia. Pectoral fin distal radial is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin radial that sometimes ossifies, develops from the pectoral fin endoskeletal disc, and is located at the proximal region of a lepidotrichium, between its hemitrichia. Pectoral fin distal radial is paired.
TAO:GA_TG
propterygium
The cartilaginous propterygium may partially ossify and fuse to the base of the pectoral hemilepidotrichium 1 in teleosts, but remains as a separate element in non-teleostean fishes.
The propterygium is the lateralmost or anteriormost basal cartilage that originates from the pectoral fin endoskeletal disc. The bases of the pectoral lepidotrichium 1 plus the propterygium articulates with the scapula.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral propterygium
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001589
pectoral propterygium
TAO:GA_TG
The propterygium is the lateralmost or anteriormost basal cartilage that originates from the pectoral fin endoskeletal disc. The bases of the pectoral lepidotrichium 1 plus the propterygium articulates with the scapula.
claustrum bone
Endochondral bone, membrane bone, and Weberian ossicle that is located dorsal to the scaphium. The claustrum bone is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
first Weberian ossicle
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Endochondral bone, membrane bone, and Weberian ossicle that is located dorsal to the scaphium. The claustrum bone is bilaterally paired.
ZFIN:curator
TAO:0001592
first Weberian ossicle
caudal fin upper lobe
Surface structure that is the dorsal portion of the caudal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin dorsal lobe
teleost_anatomy_curators
uberon/phenoscape-anatomy
Surface structure that is the dorsal portion of the caudal fin.
TAO:wd
TAO:0001593
caudal fin dorsal lobe
caudal fin lower lobe
Surface structure that is the ventral portion of the caudal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin ventral lobe
teleost_anatomy_curators
uberon/phenoscape-anatomy
Surface structure that is the ventral portion of the caudal fin.
TAO:wd
TAO:0001594
caudal fin ventral lobe
maxilla ascending process
Process that is the upper portion of the maxilla that rests on the posterior surface of the lateral portion of the premaxilla.
Synonyms maxilla ascending arm used in Zanata and Vari 2005, and maxilla upper arm used in Weitzman 1962
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
maxilla ascending arm
maxilla upper arm
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001603
maxilla ascending arm
TAO:0001603
maxilla upper arm
Process that is the upper portion of the maxilla that rests on the posterior surface of the lateral portion of the premaxilla.
TAO:wd
true
true
lateral ethmoid palatine process
Lateral bony projection proximal to lateral ethmoid-palatine joint, and located anterior to orbital region and posterior to olfactory region.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
antorbital process
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lateral bony projection proximal to lateral ethmoid-palatine joint, and located anterior to orbital region and posterior to olfactory region.
TAO:wd
TAO:0001604
antorbital process
true
true
true
caudal scute series
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal scute
Scute that is a median bony plate forming anterior to procurrent caudal fin rays.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scute that is a median bony plate forming anterior to procurrent caudal fin rays.
TAO:wd
basipterygoid process of parasphenoid
Process that is the paired process of the parasphenoid that articulates with the suspensorium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basipterygoid process
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Process that is the paired process of the parasphenoid that articulates with the suspensorium.
TAO:wd
TAO:0001607
basipterygoid process
true
true
autopalatine-lateral ethmoid joint
Joint that articulates the autopalatine and lateral ethmoid and bones. Autopalatine-lateral ethmoid joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the autopalatine and lateral ethmoid and bones. Autopalatine-lateral ethmoid joint is paired.
TAO:wd
pharyngobranchial 2 bone uncinate process
Bony projection that is part of the pharyngobranchial 2 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Bony projection that is part of the pharyngobranchial 2 bone.
TAO:wd
quadrate dorsal process
An endochondral bone that is the dorsally-oriented bony extension of the quadrate, extending from the anterior portion of the bone.
Term from Weitzman, 1962 and Sidlauskas and Vari, 2008.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
quadrate superior arm
teleost_anatomy_curators
uberon/phenoscape-anatomy
An endochondral bone that is the dorsally-oriented bony extension of the quadrate, extending from the anterior portion of the bone.
TAO:wd
TAO:0001610
quadrate superior arm
true
true
true
quadrate posterodorsal process
Process that is the posterior extension of the quadrate and located dorsal to the quadrate ventral process.
Term from Weitzman, 1962 and Sidlauskas and Vari, 2008.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Process that is the posterior extension of the quadrate and located dorsal to the quadrate ventral process.
TAO:wd
true
sensory canal
Multi-tissue structure that is a fluid-filled canal in the integument and usually dermal bones, and contains one or more neuromast organs.
Sensory canals usually communicate with the environment via pores in the sensory canal or at the distal ends of tubules, which extend from canal where pores would otherwise be.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral line canal
lateral-line canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001612
lateral-line canal
TAO:0001612
lateral line canal
Multi-tissue structure that is a fluid-filled canal in the integument and usually dermal bones, and contains one or more neuromast organs.
TAO:wd
true
dorsal fin middle radial
Dorsal fin radial that is the rod-like internal median skeletal support bone of the dorsal fin located between the dorsal fin proximal radial and dorsal fin distal radial.
Synonym dorsal fin medial radial from Weitzman, 1962.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal fin medial radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001613
dorsal fin medial radial
Dorsal fin radial that is the rod-like internal median skeletal support bone of the dorsal fin located between the dorsal fin proximal radial and dorsal fin distal radial.
TAO:wd
anal fin middle radial
Anal fin radial that is the rod-like internal median skeletal support bone of the anal fin located between the anal fin proximal radial and anal fin distal radial.
Synonym anal fin medial radial from Weitzman, 1962.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin medial radial
medial anal-fin radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anal fin radial that is the rod-like internal median skeletal support bone of the anal fin located between the anal fin proximal radial and anal fin distal radial.
TAO:wd
TAO:0001614
anal fin medial radial
TAO:0001614
medial anal-fin radial
sphenotic spine
Process of the sphenotic. The process may project antero-laterally or laterally or ventro-laterally and it has different development in different fish groups. The sphenotic spine is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sphenotic process
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
TAO:0001615
sphenotic process
Process of the sphenotic. The process may project antero-laterally or laterally or ventro-laterally and it has different development in different fish groups. The sphenotic spine is paired.
TAO:GA_TG
lateral ethmoid wing
Superficial and lateral bony projection anterior to orbital region. Sometimes with superficial ornamentation where in direct contact with skin.
Synonym of lateral ethmoid wing: lateral ethmoid ventral wing (characiforms).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral ethmoid ventral wing
teleost_anatomy_curators
uberon/phenoscape-anatomy
Superficial and lateral bony projection anterior to orbital region. Sometimes with superficial ornamentation where in direct contact with skin.
TAO:wd
true
true
true
TAO:0001616
lateral ethmoid ventral wing
trunk sensory canal
Pores frequently piercing scales if present; occasionally enclosed in bony ossicles.
Sensory canal on trunk which is posterior to the pectoral girdle and often reaching to or onto the caudal fin. The trunk sensory canal is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
trunk lateral line canal
uberon/phenoscape-anatomy
Sensory canal on trunk which is posterior to the pectoral girdle and often reaching to or onto the caudal fin. The trunk sensory canal is bilaterally paired.
TAO:wd
TAO:0001617
trunk lateral line canal
post-otic sensory canal
May be continuous with to the trunk sensory canal and anteriorly with the otic and preoperculo-mandibular sensory canals.
Sensory canal between and in close proximity to the trunk sensory canal and anteriorly with the otic and preoperculo-mandibular sensory canals. The post-otic sensory canal is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
post-temporal canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001619
post-temporal canal
Sensory canal between and in close proximity to the trunk sensory canal and anteriorly with the otic and preoperculo-mandibular sensory canals. The post-otic sensory canal is bilaterally paired.
TAO:wd
lagenar capsule
Anatomical cluster that consists of a bulla formed by the exoccipital and basioccipital bones, and surrounds the lagena.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that consists of a bulla formed by the exoccipital and basioccipital bones, and surrounds the lagena.
TAO:wd
odontode
Multi-tissue structure composed of enameloid and dentine surrounding a pulp cavity, and found either attached to dermal bone or freely in the skin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
odontodes
teleost_anatomy_curators
uberon/phenoscape-anatomy
Multi-tissue structure composed of enameloid and dentine surrounding a pulp cavity, and found either attached to dermal bone or freely in the skin.
TAO:wd
TAO:0001622
odontodes
type 1 odontode
Odontode that is attached to dermal bone.
Term from Schaefer & Buitrago-Suarez 2002.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Odontode that is attached to dermal bone.
TAO:wd
true
true
true
type 2 odontode
Odontode that is attached to the skin and without association to dermal bone.
Term from Schaefer & Buitrago-Suarez 2002.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Odontode that is attached to the skin and without association to dermal bone.
TAO:wd
premaxillary tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the premaxilla.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the premaxilla.
true
otic sensory canal
May be continuous with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals.
Sensory canal between and in close proximity posteriorly with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals. The otic sensory canal is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sensory canal between and in close proximity posteriorly with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals. The otic sensory canal is bilaterally paired.
TAO:wd
supratemporal sensory canal
Sensory canal that crosses over the dorsal midline and in close proximity to the contralateral post-otic sensory canals. The supratemporal sensory canal is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2001618
occipital canal
occipital sensory canal
supratemporal canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001630
occipital sensory canal
TAO:0001630
supratemporal canal
TAO:0001630
occipital canal
Sensory canal that crosses over the dorsal midline and in close proximity to the contralateral post-otic sensory canals. The supratemporal sensory canal is unpaired.
TAO:wd
ectopterygoid tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the ectopterygoid bone.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the ectopterygoid bone.
entopterygoid tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the entopterygoid bone.
mesopterygoid tooth
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001633
mesopterygoid tooth
TAO:wd
Tooth that is attached to the entopterygoid bone.
pharyngobranchial 1 cartilage
Most anterior pharyngobranchial cartilage, located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 1 cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001634
infrapharyngobranchial 1 cartilage
Most anterior pharyngobranchial cartilage, located medial to the epibranchials.
TAO:wd
pharyngobranchial 1 bone
Most anterior pharyngobranchial bone, located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 1 bone
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001635
infrapharyngobranchial 1 bone
Most anterior pharyngobranchial bone, located medial to the epibranchials.
TAO:wd
pharyngobranchial 4 bone
Most posterior pharyngobranchial bone, located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 4 bone
teleost_anatomy_curators
uberon/phenoscape-anatomy
Most posterior pharyngobranchial bone, located medial to the epibranchials.
TAO:wd
TAO:0001636
infrapharyngobranchial 4 bone
notochordal ossification
Perichordal bone that surrounds the anterior tip of the notochord.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Perichordal bone that surrounds the anterior tip of the notochord.
TAO:wd
pharyngeal tooth plate
Dermal bone of the pharyngeal arches usually bearing teeth.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngeal toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001647
pharyngeal toothplate
Dermal bone of the pharyngeal arches usually bearing teeth.
TAO:wd
basihyal tooth plate
Pharyngeal tooth plate that lies dorsal to the basihyal cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basihyal toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001648
basihyal toothplate
Pharyngeal tooth plate that lies dorsal to the basihyal cartilage or bone.
TAO:wd
basihyal tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the basihyal tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the basihyal tooth plate.
true
pharyngobranchial 2 tooth plate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 2 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngobranchial 2 toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal tooth plate that lies ventral to pharyngobranchial 2 bone.
TAO:wd
TAO:0001650
pharyngobranchial 2 toothplate
pharyngobranchial 2 tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the pharyngobranchial 2 tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:wd
Tooth that is attached to the pharyngobranchial 2 tooth plate.
pharyngobranchial 3 tooth plate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 3 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngobranchial 3 toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal tooth plate that lies ventral to pharyngobranchial 3 bone.
TAO:wd
TAO:0001652
pharyngobranchial 3 toothplate
pharyngobranchial 3 tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is part of the pharyngobranchial 3 tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:wd
Tooth that is part of the pharyngobranchial 3 tooth plate.
upper pharyngeal 4 tooth plate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 4, and located anterior to upper pharyngeal 5 tooth plate.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
upper pharyngeal 4 toothplate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 4, and located anterior to upper pharyngeal 5 tooth plate.
TAO:wd
TAO:0001654
upper pharyngeal 4 toothplate
upper pharyngeal 4 tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the upper pharyngeal 4 tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the upper pharyngeal 4 tooth plate.
true
upper pharyngeal 5 tooth plate
Pharyngeal toothplate that lies ventral to pharyngobranchial 4, and located posterior to upper pharyngeal 4 tooth plate.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
upper pharyngeal 5 toothplate
TAO:0001656
upper pharyngeal 5 toothplate
Pharyngeal toothplate that lies ventral to pharyngobranchial 4, and located posterior to upper pharyngeal 4 tooth plate.
TAO:wd
upper pharyngeal 5 tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the upper pharyngeal 5 tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the upper pharyngeal 5 tooth plate.
true
upper pharyngeal tooth plate
Pharyngeal tooth plate that lies ventral to pharyngobranchials 3 and 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This represents the condition found in catfishes.
teleost_anatomy_curators
uberon/phenoscape-anatomy
upper pharyngeal toothplate
Pharyngeal tooth plate that lies ventral to pharyngobranchials 3 and 4.
TAO:wd
TAO:0001658
upper pharyngeal toothplate
upper pharyngeal tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the upper pharyngeal tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the upper pharyngeal tooth plate.
true
basibranchial tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is part of the basibranchial tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is part of the basibranchial tooth plate.
true
basibranchial tooth plate
Pharyngeal tooth plate that lies dorsal to basibranchials 1-3.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basibranchial 1-3 toothplates
basibranchial toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001661
basibranchial toothplate
TAO:0001661
basibranchial 1-3 toothplates
Pharyngeal tooth plate that lies dorsal to basibranchials 1-3.
TAO:wd
basibranchial 4 tooth plate
Pharyngeal tooth plate that lies dorsal to basibranchial 4 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basibranchial 4 toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001662
basibranchial 4 toothplate
Pharyngeal tooth plate that lies dorsal to basibranchial 4 bone.
TAO:wd
basibranchial 4 tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the basibranchial 4 tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth that is attached to the basibranchial 4 tooth plate.
true
basibranchial 2 tooth plate
Pharyngeal tooth plate that lies dorsal to basibranchial 2 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basibranchial 2 toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001664
basibranchial 2 toothplate
Pharyngeal tooth plate that lies dorsal to basibranchial 2 bone.
TAO:wd
basibranchial 2 tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth that is attached to the basibranchial 2 tooth plate.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:wd
Tooth that is attached to the basibranchial 2 tooth plate.
rudimentary neural arch
Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002.
TAO:wd
anal fin radial
Anal fin radials are internal skeletal supports of the anal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anal fin radials are internal skeletal supports of the anal fin.
TAO:wd
dorsal fin radial
Dorsal fin radials are internal skeletal supports of the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Dorsal fin radials are internal skeletal supports of the dorsal fin.
TAO:wd
infraorbital 6
Infraorbital that is the sixth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dermosphenotic
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001674
dermosphenotic
Infraorbital that is the sixth bone of the infraorbital series.
TAO:wd
mesethmoid cornu
Bony projection that extends from the mesethmoid anteriorly. Mesethmoid cornua are paired processes each articulating with its ipsilateral premaxilla and both cornua bounding a median mesethmoid cleft.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cornu
cornua
cornuae
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001675
cornua
TAO:0001675
cornuae
true
Bony projection that extends from the mesethmoid anteriorly. Mesethmoid cornua are paired processes each articulating with its ipsilateral premaxilla and both cornua bounding a median mesethmoid cleft.
TAO:pem
true
TAO:0001675
cornu
true
mesethmoid-premaxillary joint
Joint that articulates the mesethmoid and premaxilla. Mesethmoid-premaxillary joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the mesethmoid and premaxilla. Mesethmoid-premaxillary joint is paired.
TAO:pem
true
mesethmoid-nasal joint
Joint that articulates the mesethmoid and nasal. Mesethmoid-nasal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the mesethmoid and nasal. Mesethmoid-nasal joint is paired.
TAO:pem
mesethmoid-frontal joint
Joint that articulates the mesethmoid and frontal. Mesethmoid-frontal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the mesethmoid and frontal. Mesethmoid-frontal joint is paired.
TAO:pem
mesethmoid-lateral ethmoid joint
Joint that articulates the mesethmoid and lateral ethmoid. Mesethmoid-lateral ethmoid joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the mesethmoid and lateral ethmoid. Mesethmoid-lateral ethmoid joint is paired.
TAO:wd
mesethmoid-vomer joint
Joint that articulates the mesethmoid and vomer. Mesethmoid-vomer joint is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesethmoid-prevomer joint
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001680
mesethmoid-prevomer joint
Joint that articulates the mesethmoid and vomer. Mesethmoid-vomer joint is unpaired.
TAO:pem
cornu mesial process
Bony projection that is mesially-directed and off the anteromedial corner of each mesethmoid cornu.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Bony projection that is mesially-directed and off the anteromedial corner of each mesethmoid cornu.
TAO:pem
true
true
transcapular ligament
Baudelot's ligament
Ligament that is attached to supracleithrum and basioccipital.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
transscapular ligament
uberon/phenoscape-anatomy
TAO:0001683
transscapular ligament
Ligament that is attached to supracleithrum and basioccipital.
TAO:wd
Baudelot's ligament
TAO:0001683
ossified transcapular ligament
Membrane bone that is fused to supracleithrum and is jointed to basioccipital and exoccipital.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ossified Baudelot's ligament
ossified transscapular ligament
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001684
ossified Baudelot's ligament
Membrane bone that is fused to supracleithrum and is jointed to basioccipital and exoccipital.
TAO:pem
TAO:0001684
ossified transscapular ligament
lateral ethmoid-ectopterygoid ligament
Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid.
TAO:wd
bony shelf above orbit
The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit.
interopercular-mandibular ligament
Interopercular-mandibular ligament is a ligament that connects the interopercle to an element of the lower jaw, typically the retroarticular.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
interopercular-retroarticular ligament
interoperculo-mandibular ligament
interoperculomandibular ligament
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001687
interoperculomandibular ligament
TAO:0001687
interoperculo-mandibular ligament
TAO:0001687
interopercular-retroarticular ligament
Interopercular-mandibular ligament is a ligament that connects the interopercle to an element of the lower jaw, typically the retroarticular.
TAO:wd
palatine cartilage
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
palatine cartilage - cartilage that is separate from and anterior to the pterygoquadrate cartilage.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
TAO:wd
palatine cartilage - cartilage that is separate from and anterior to the pterygoquadrate cartilage.
pterygoquadrate cartilage
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pterygoquadrate cartilage - cartilage that is separate from and posterior to the palatine cartilage.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
TAO:wd
pterygoquadrate cartilage - cartilage that is separate from and posterior to the palatine cartilage.
anterior cartilage of palatine
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior cartilage of palatine - cartilage that caps the anterior end of the autopalatine bone. It is typically present in adults.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
TAO:wd
anterior cartilage of palatine - cartilage that caps the anterior end of the autopalatine bone. It is typically present in adults.
posterior cartilage of palatine
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior cartilage of palatine - cartilage that caps the posterior end of the autopalatine bone. It is typically present in adults.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:wd
posterior cartilage of palatine - cartilage that caps the posterior end of the autopalatine bone. It is typically present in adults.
true
median premaxilla
Dermal bone that is located in the middle of the upper jaw, independently formed by fusion of tooth bases attached to soft tissue in the middle portion of the upper lip. The median premaxilla bears teeth in adults.
Recorded in trichomycterid subfamilies Stegophilinae and Vandelliinae (Baskin, 1973). submitted by Mario de Pinna.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is located in the middle of the upper jaw, independently formed by fusion of tooth bases attached to soft tissue in the middle portion of the upper lip. The median premaxilla bears teeth in adults.
TAO:wd
protractor operculi
Muscle located in the lateral region of the cheek, linking the lateral surface of opercle with the posterolateral margin of the suspensorium (usually the preopercle).
Occurs in most members of the Trichomycteridae, except in basal Copionodontinae and Trichogeninae (de Pinna, 1992).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Muscle located in the lateral region of the cheek, linking the lateral surface of opercle with the posterolateral margin of the suspensorium (usually the preopercle).
TAO:wd
humerovertebral ligament
Ligament that links the tip of the postcleithral process of the cleithrum with either the vertebral column (at the vertebral parapophysis or rib of the sixth vertebra) or with the soft tissue around the postcleithral region.
Recorded in siluriform families Aspredinidae, Amblycipitidae, Akysidae, Sisoridae and Erethistidae (dePinna 1996). Submitted by Mario de Pinna.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ligament that links the tip of the postcleithral process of the cleithrum with either the vertebral column (at the vertebral parapophysis or rib of the sixth vertebra) or with the soft tissue around the postcleithral region.
TAO:wd
mediopharyngobranchial
Pharyngeal arch cartilage, elongate and usually bifurcated posteriorly, located anteriorly on the upper branchial arches, attached to the anterior tips of the first infrapharyngobranchials. It supports rows of gill rakers on each side and is not homologous to other structures in the teleost gill-arch skeleton. One or two mediopharyngobranchials may be present.
Recorded in several Clupeoidei (Nelson, 1967). Submitted by Mario de Pinna.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage, elongate and usually bifurcated posteriorly, located anteriorly on the upper branchial arches, attached to the anterior tips of the first infrapharyngobranchials. It supports rows of gill rakers on each side and is not homologous to other structures in the teleost gill-arch skeleton. One or two mediopharyngobranchials may be present.
TAO:wd
gongyloid cartilage
Pharyngeal arch cartilage present on the dorsal surface of the middle portion of the upper branchial arches, dorsal to the point of contact between the second and third infrapharyngobranchials. It is round or cylyndrical in shape. Not homologous to the mediopharyngobranchial.
Recorded in Pristigasteridae and Engraulidae, of Clupeiformes, apparently also present in Chanos, of Gonorynchiformes (Di Dario, 2002).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage present on the dorsal surface of the middle portion of the upper branchial arches, dorsal to the point of contact between the second and third infrapharyngobranchials. It is round or cylyndrical in shape. Not homologous to the mediopharyngobranchial.
TAO:wd
transverse radial
Endochondral bone, which may be ossified or not in adults, located immediately anteriorly to the pterygiophore series of the anal fin. The structure is usually cylindrical, and its plane of symmetry is transverse to that of pterygiophores and fin rays.
Recorded in some Cetopsidae, Clariidae and Austroglanididae (Siluriformes) (De Pinna et al., 2007).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Endochondral bone, which may be ossified or not in adults, located immediately anteriorly to the pterygiophore series of the anal fin. The structure is usually cylindrical, and its plane of symmetry is transverse to that of pterygiophores and fin rays.
TAO:wd
anal-fin stay
Endochondral bone located posterior to the last anal fin pterygiophore. The anal fin stay is a median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin stay
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001698
anal fin stay
Endochondral bone located posterior to the last anal fin pterygiophore. The anal fin stay is a median bone.
TAO:wd
dorsal-fin stay
Endochondral bone located posterior to the last dorsal fin pterygiophore. The dorsal fin stay is a median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal fin stay
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001699
dorsal fin stay
Endochondral bone located posterior to the last dorsal fin pterygiophore. The dorsal fin stay is a median bone.
TAO:wd
caudal-fin stay
Dermal bone that is located anterior to the caudal fin procurrent rays. Caudal fin stays are unpaired median bones.
Development of caudal fin stays appears uncertain according to several authors (e.g., Zanata and Vari 2005, Vari 1995).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin stay
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001700
caudal fin stay
true
Dermal bone that is located anterior to the caudal fin procurrent rays. Caudal fin stays are unpaired median bones.
TAO:wd
basibranchial 5 bone
Basibranchial bone that is ventral, median, and associated with branchial arch 5 (pharyngeal arch 7). Develops in posterior copula cartilage or basibranchial 5 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Basibranchial bone that is ventral, median, and associated with branchial arch 5 (pharyngeal arch 7). Develops in posterior copula cartilage or basibranchial 5 cartilage.
TAO:wd
infraorbital 7
Infraorbital that is the seventh bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the seventh bone of the infraorbital series.
TAO:wd
infraorbital 8
Infraorbital that is the eighth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the eighth bone of the infraorbital series.
TAO:wd
infraorbital 9
Infraorbital that is the ninth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the ninth bone of the infraorbital series.
TAO:wd
infraorbital 10
Infraorbital that is the tenth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the tenth bone of the infraorbital series.
TAO:wd
infraorbital 11
Infraorbital that is the eleventh bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the eleventh bone of the infraorbital series.
TAO:wd
infraorbital 12
Infraorbital that is the twelfth bone of the infraorbital series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the twelfth bone of the infraorbital series.
TAO:wd
dermosphenotic
Infraorbital that is the last bone of the infraorbital series, carrying the infraorbital canal, and sometimes also the supraorbital, temporal, and/or preopercular canals. The dermosphenotic is sometimes sutured or fused completely to the skull, e.g. to the autosphenotic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infraorbital 5
infraorbital 6
infraorbital 7
infraorbital 8
teleost_anatomy_curators
uberon/phenoscape-anatomy
Infraorbital that is the last bone of the infraorbital series, carrying the infraorbital canal, and sometimes also the supraorbital, temporal, and/or preopercular canals. The dermosphenotic is sometimes sutured or fused completely to the skull, e.g. to the autosphenotic.
TAO:wd
TAO:0001708
infraorbital 8
TAO:0001708
infraorbital 5
TAO:0001708
infraorbital 7
TAO:0001708
infraorbital 6
infraorbital series
Anatomical cluster that is the series of dermal bones surrounding the orbit and associated with the infraorbital sensory canal.
The infraorbital series may include the antorbital, a variable number of infraorbitals, and dermosphenotic (or posteriormost dorsal infraorbital). The infraorbital series may be formed by seven (primitively) or less bones in teleosts. Consequently, the so called dermosphenotic may correspond to the seventh, sixth or fifth bone, etc., depending on the taxon.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
circumorbital series
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001709
circumorbital series
Anatomical cluster that is the series of dermal bones surrounding the orbit and associated with the infraorbital sensory canal.
TAO:GA_TG
opercle-interopercle joint
Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired.
TAO:wd
frontal-pterotic joint
Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired.
TAO:wd
caudal principal ray 1
Caudal principal ray that is the dorsalmost caudal principal ray of the caudal fin.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is the dorsalmost caudal principal ray of the caudal fin.
TAO:wd
caudal principal ray 2
Caudal principal ray that is ventrally adjacent to caudal principal ray 1.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 1.
TAO:wd
caudal principal ray 3
Caudal principal ray that is ventrally adjacent to caudal principal ray 2.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 2.
TAO:wd
caudal principal ray 4
Caudal principal ray that is ventrally adjacent to caudal principal ray 3.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 3.
TAO:wd
caudal principal ray 5
Caudal principal ray that is ventrally adjacent to caudal principal ray 4.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 4.
TAO:wd
caudal principal ray 6
Caudal principal ray that is ventrally adjacent to caudal principal ray 5.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 5.
TAO:wd
caudal principal ray 7
Caudal principal ray that is ventrally adjacent to caudal principal ray 6.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 6.
TAO:wd
caudal principal ray 8
Caudal principal ray that is ventrally adjacent to caudal principal ray 7.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 7.
TAO:wd
caudal principal ray 9
Caudal principal ray that is ventrally adjacent to caudal principal ray 8.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 8.
TAO:wd
caudal principal ray 10
Caudal principal ray that is ventrally adjacent to caudal principal ray 9.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 9.
TAO:wd
caudal principal ray 11
Caudal principal ray that is ventrally adjacent to caudal principal ray 10.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 10.
TAO:wd
caudal principal ray 12
Caudal principal ray that is ventrally adjacent to caudal principal ray 11.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 11.
TAO:wd
caudal principal ray 13
Caudal principal ray that is ventrally adjacent to caudal principal ray 12.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 12.
TAO:wd
caudal principal ray 14
Caudal principal ray that is ventrally adjacent to caudal principal ray 13.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 13.
TAO:wd
caudal principal ray 15
Caudal principal ray that is ventrally adjacent to caudal principal ray 14.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 14.
TAO:wd
caudal principal ray 16
Caudal principal ray that is ventrally adjacent to caudal principal ray 15.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 15.
TAO:wd
caudal principal ray 17
Caudal principal ray that is ventrally adjacent to caudal principal ray 16.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 16.
TAO:wd
caudal principal ray 18
Caudal principal ray that is ventrally adjacent to caudal principal ray 17.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 17.
TAO:wd
caudal principal ray 19
Caudal principal ray that is ventrally adjacent to caudal principal ray 18.
For reference, see Weitzman and Fink 1985 Figure 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal principal ray that is ventrally adjacent to caudal principal ray 18.
TAO:wd
vertebral element 5
5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 4.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 4.
mesethmoid ventral diverging lamella
Bony projection that is the posterolaterally oriented projection on the ventral region of the mesethmoid. Mesethmoid ventral diverging lamellae are paired and posteriorly contact the lateral ethmoid bones.
Reference: Weitzman 1962.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bony projection that is the posterolaterally oriented projection on the ventral region of the mesethmoid. Mesethmoid ventral diverging lamellae are paired and posteriorly contact the lateral ethmoid bones.
TAO:wd
true
true
true
posterior process of basipterygium
Process that is the posteriorly oriented, paired projection of the basipterygium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ischiac process
ischiatic process
posterior pelvic process
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001734
ischiac process
true
http://hdl.handle.net/10088/11710
posterior pelvic process
Process that is the posteriorly oriented, paired projection of the basipterygium.
TAO:wd
true
TAO:0001734
ischiatic process
scapular foramen
Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Weitzman 1962.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone.
TAO:wd
coracoid foramen
Foramen that is located in the coracoid.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen that is located in the coracoid.
TAO:wd
anterior cranial fontanel
Fontanel that is located between the contralateral frontals and anterior to the epiphyseal bar.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior fontanel
frontal fontanel
frontal fontanelle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001739
anterior fontanel
Fontanel that is located between the contralateral frontals and anterior to the epiphyseal bar.
TAO:wd
TAO:0001739
frontal fontanelle
TAO:0001739
frontal fontanel
posterior cranial fontanel
Fontanel that is located posterior to the epiphyseal bar, and typically located between the contralateral frontals and parietals (if present) and bordered posteriorly by the supraoccipital.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
parietal fontanel
posterior fontanel
posterior fontanelle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001740
posterior fontanel
Fontanel that is located posterior to the epiphyseal bar, and typically located between the contralateral frontals and parietals (if present) and bordered posteriorly by the supraoccipital.
TAO:wd
TAO:0001740
parietal fontanel
TAO:0001740
posterior fontanelle
trigeminofacial foramen
Foramen through which branches of cranial nerves V (trigeminal) and VII (facial) exit.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
i]In some vertebrates there are separate trigeminal foramen and facial foramen.
teleost_anatomy_curators
trigemino-facialis foramen
trigeminofacial nerve foramen
trigeminofacialis foramen
uberon/phenoscape-anatomy
TAO:0001741
trigeminofacial nerve foramen
Foramen through which branches of cranial nerves V (trigeminal) and VII (facial) exit.
TAO:wd
TAO:0001741
trigeminofacialis foramen
TAO:0001741
trigemino-facialis foramen
auditory foramen
Foramen through which cranial nerve VIII (auditory) exits.
Reference: Weitzman 1962.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen through which cranial nerve VIII (auditory) exits.
TAO:wd
replacement tooth trench
Anatomical space within a bone in which teeth develop.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
replacement tooth crypt
replacement tooth crypts
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical space within a bone in which teeth develop.
TAO:wd
TAO:0001744
replacement tooth crypts
TAO:0001744
replacement tooth crypt
premaxilla replacement tooth trench
Replacement tooth trench that is located in the premaxilla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Replacement tooth trench that is located in the premaxilla.
TAO:wd
dentary replacement tooth trench
Replacement tooth trench that is located in the dentary.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Replacement tooth trench that is located in the dentary.
TAO:wd
lateral mesethmoid wing
Bony projection located on the anteroventral region of the mesethmoid which articulates with the premaxilla.
Synonyms: mesethmoid lateral wing (Zanata and Vari 2005) lateral ethmoid wing (Weitzman 1962) premaxillary articular process (Fink and Fink 1996).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesethmoid lateral wing
premaxillary articular process
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bony projection located on the anteroventral region of the mesethmoid which articulates with the premaxilla.
TAO:wd
TAO:0001747
premaxillary articular process
true
true
TAO:0001747
mesethmoid lateral wing
true
superficial ophthalmic nerve foramen
Foramen through which the superficial ophthalmic nerve passes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen through which the superficial ophthalmic nerve passes.
TAO:wd
dentary-anguloarticular joint
Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired.
TAO:wd
rib of vertebra 6
Rib that articulates with the parapophysis of the sixth centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sixth pleural rib
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001750
sixth pleural rib
Rib that articulates with the parapophysis of the sixth centrum.
TAO:wd
rib of vertebra 5
Rib that articulates with the parapophysis of the fifth centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fifth pleural rib
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001751
fifth pleural rib
Rib that articulates with the parapophysis of the fifth centrum.
TAO:wd
pre-narial cartilage
Chen 1994.
The pre-narial cartilage is a cartilage that is located anterior to the anterior naris.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
The pre-narial cartilage is a cartilage that is located anterior to the anterior naris.
posttemporal fossa
Chen 1994 gives these two synonyms: "temporal fossa", Gauba 1967; and "temporal groove", Mahajan 1966.
Fossa where the exoccipital forms the medial portion and the epioccipital forms the lateral margin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
temporal fossa
temporal groove
uberon/phenoscape-anatomy
TAO:0001753
temporal groove
Fossa where the exoccipital forms the medial portion and the epioccipital forms the lateral margin.
ZFIN:ZDB-PUB-961014-192
TAO:0001753
temporal fossa
dorsal fin lepidotrichium 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin lepidotrichium 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin lepidotrichium 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin lepidotrichium 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin lepidotrichium 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin lepidotrichium 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin lepidotrichium 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pectoral fin lepidotrichium 1
Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched but occasionally may be a massive strong unsegmented element (e.g., spine).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 1
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched but occasionally may be a massive strong unsegmented element (e.g., spine).
TAO:GA_TG
TAO:0001761
pectoral fin ray 1
pectoral fin lepidotrichium 2
Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray that it is usually branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray that it is usually branched and segmented.
TAO:GA_TG
TAO:0001762
pectoral fin ray 2
pectoral fin lepidotrichium 3
Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray that it is usually branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 3
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray that it is usually branched and segmented.
TAO:GA_TG
TAO:0001763
pectoral fin ray 3
pectoral fin lepidotrichium 4
Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray that it is usually branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 4
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray that it is usually branched and segmented.
TAO:GA_TG
TAO:0001764
pectoral fin ray 4
pectoral fin lepidotrichium 5
Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray that it is usually branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 5
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001765
pectoral fin ray 5
Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray that it is usually branched and segmented.
TAO:GA_TG
pectoral fin lepidotrichium 6
Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray that it is usually branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 6
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001766
pectoral fin ray 6
Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray that it is usually branched and segmented.
TAO:GA_TG
pectoral fin lepidotrichium 7
Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray that it is usually branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin ray 7
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray that it is usually branched and segmented.
TAO:GA_TG
TAO:0001767
pectoral fin ray 7
retractor tentaculi
Bilaterally paired dorsal hyoid arch muscle that retracts the maxillary barbel.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bilaterally paired dorsal hyoid arch muscle that retracts the maxillary barbel.
TAO:wd
anal fin lepidotrichium 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin lepidotrichium 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin lepidotrichium 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin lepidotrichium 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin lepidotrichium 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin lepidotrichium 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin lepidotrichium 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pelvic fin lepidotrichium 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
supraoccipital crest
Process that is part of the supraoccipital. It is a posteriorly directed and unpaired median projection off the posterior margin of the supraoccipital bone.
The supraoccipital crest may be small and restricted to the dorsal part of the supraoccipital, or may be large and long and extending ventrally to the dorsal margin of the foramen magnum. The supraoccipital crest may be a large process extending above the skull roof in some teleostean subgroups.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
supraoccipital process
supraoccipital spine
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001783
supraoccipital process
true
Process that is part of the supraoccipital. It is a posteriorly directed and unpaired median projection off the posterior margin of the supraoccipital bone.
TAO:GA_TG
TAO:0001783
supraoccipital spine
true
autopalatine-vomer joint
Joint that articulates autopalatine and vomer bones. Autopalatine-vomer joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates autopalatine and vomer bones. Autopalatine-vomer joint is paired.
TAO:wd
branched dorsal fin ray
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
unbranched dorsal fin ray
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pectoral fin spine
Pectoral-fin lepidotrichium 1 with mostly co-ossified and unsegmented hemitrichia that form a stiff and usually thick shaft and enlarged basal processes that moveably articulate with the pectoral girdle. The pectoral fin spine may also result from the fusion of several lepidotrichia that form a stiff shaft.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral spine
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral-fin lepidotrichium 1 with mostly co-ossified and unsegmented hemitrichia that form a stiff and usually thick shaft and enlarged basal processes that moveably articulate with the pectoral girdle. The pectoral fin spine may also result from the fusion of several lepidotrichia that form a stiff shaft.
TAO:GA_TG
TAO:wd
TAO:0001787
pectoral spine
pelvic splint
Dermal bone that is located near the lateral margin of the pelvic fin, and lateral to pelvic-fin lepidotrichium 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Dermal bone that is located near the lateral margin of the pelvic fin, and lateral to pelvic-fin lepidotrichium 1.
TAO:wd
true
true
dorsal fin spine 1
Dorsal-fin lepidotrichium 1 with co-ossified and unsegmented hemitrichia that form a stiff shaft and enlarged base that moveably articulates with first (anteriormost) dorsal-fin pterygiophore.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal spine 1
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dorsal-fin lepidotrichium 1 with co-ossified and unsegmented hemitrichia that form a stiff shaft and enlarged base that moveably articulates with first (anteriormost) dorsal-fin pterygiophore.
TAO:wd
TAO:0001789
dorsal spine 1
dorsal fin spine 2
Dorsal-fin lepidotrichium 2 with co-ossified and unsegmented hemitrichia that form a stiff shaft and enlarged base that moveably articulates with second dorsal-fin pterygiophore.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal spine 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dorsal-fin lepidotrichium 2 with co-ossified and unsegmented hemitrichia that form a stiff shaft and enlarged base that moveably articulates with second dorsal-fin pterygiophore.
TAO:wd
TAO:0001790
dorsal spine 2
pharyngobranchial 3 bone uncinate process
Bony projection that is part of the pharyngobranchial 3.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bony projection that is part of the pharyngobranchial 3.
TAO:wd
true
true
pharyngobranchial 4 bone uncinate process
Bony projection that is part of the pharyngobranchial 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 4 bone uncinate process
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001793
infrapharyngobranchial 4 bone uncinate process
Bony projection that is part of the pharyngobranchial 4.
TAO:wd
true
true
orbitosphenoid-prootic joint
Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired.
TAO:wd
ceratohyal foramen
Foramen in the anterior ceratohyal for passage of the hyoidean artery.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
bericiform foramen
beryciform foramen
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen in the anterior ceratohyal for passage of the hyoidean artery.
TAO:wd
TAO:0001795
beryciform foramen
TAO:0001795
bericiform foramen
epibranchial 2 bone uncinate process
Epibranchial uncinate process that is part of epibranchial 2 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial uncinate process that is part of epibranchial 2 bone.
TAO:wd
epibranchial 1 bone uncinate process
Epibranchial uncinate process that is part of epibranchial 1 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial uncinate process that is part of epibranchial 1 bone.
TAO:wd
epicentral
Intermuscular bone that articulates with the vertebral centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
neoneural
teleost_anatomy_curators
uberon/phenoscape-anatomy
diépipleural
Intermuscular bone that articulates with the vertebral centrum.
TAO:wd
PSPUB:0000131
diépipleural
PSPUB:0000165
PSPUB:0000166
neoneural
recessus lateralis
Intracranial space formed by confluence of supraorbital, infraorbital, preopercular and temporal sensory canals. See also Di Dario (2004).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Intracranial space formed by confluence of supraorbital, infraorbital, preopercular and temporal sensory canals. See also Di Dario (2004).
TAO:wd
cephalic rib
Modified epicentral intermuscular bone that connects the back of the skull with the pectoral girdle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Modified epicentral intermuscular bone that connects the back of the skull with the pectoral girdle.
TAO:wd
quadrate-hyomandibula joint
Joint that articulates quadrate and hyomandibula bones. Quadrate-hyomandibula joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates quadrate and hyomandibula bones. Quadrate-hyomandibula joint is paired.
TAO:wd
quadrate-metapterygoid joint
Joint that articulates quadrate and metapterygoid bones. Quadrate-metapterygoid joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates quadrate and metapterygoid bones. Quadrate-metapterygoid joint is paired.
TAO:wd
olfactory nerve foramen
Foramen for the passage of the olfactory nerve or cranial nerve 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen for the passage of the olfactory nerve or cranial nerve 1.
TAO:wd
articular bone
Endochondral bone that is located posterior to the dentary, medial to the angular and antero-dorsal to the retroarticular forming the lower jaw. The articular bears a dorso-posterior articular facet for the condyle of the quadrate. The articular is a paired bone.
The articular fuses with the angular bone in clupeocephalans forming the anguloarticular.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
articular
teleost_anatomy_curators
uberon/phenoscape-anatomy
Endochondral ossification of the posterior articular part of Meckel's cartilage.[AAO]
AAO:0000028
Endochondral bone that is located posterior to the dentary, medial to the angular and antero-dorsal to the retroarticular forming the lower jaw. The articular bears a dorso-posterior articular facet for the condyle of the quadrate. The articular is a paired bone.
TAO:wd
TAO:0001805
articular
true
intracranial diverticulum of swimbladder
An anterior extension of the swimbladder that passes through a foramen in the exoccipital; part of the otophysic connection between swimbladder and inner ear.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
An anterior extension of the swimbladder that passes through a foramen in the exoccipital; part of the otophysic connection between swimbladder and inner ear.
TAO:wd
preepiotic fossa
Fossa that is a concavity on the dorsolateral surface of the skull roof found at least partially on the epiotic (epioccipital).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
preepioccipital fossa
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001807
preepioccipital fossa
Fossa that is a concavity on the dorsolateral surface of the skull roof found at least partially on the epiotic (epioccipital).
TAO:wd
facial foramen
Foramen through which cranial nerve VII (facial) exits.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This is the anterior opening of the trigeminofacialis (or trigeminal-facialis) chamber.
anterior opening trigeminofacialis chamber
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001808
anterior opening trigeminofacialis chamber
Foramen through which cranial nerve VII (facial) exits.
TAO:wd
trigeminal foramen
Foramen through which cranial nerve V (trigeminal) exits.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This is the posterior opening of trigeminofacialis (or trigeminal-facialis) chamber.
posterior opening of trigeminofacialis chamber
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001809
posterior opening of trigeminofacialis chamber
Foramen through which cranial nerve V (trigeminal) exits.
TAO:wd
supraorbital sensory canal
May be continuous with otic and infraorbital sensory canals.
Sensory canal anterior to and in close proximity to the otic and infraorbital sensory canals. The supraorbital sensory canal is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
supraorbital canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001810
supraorbital canal
Sensory canal anterior to and in close proximity to the otic and infraorbital sensory canals. The supraorbital sensory canal is bilaterally paired.
TAO:wd
infraorbital sensory canal
May be continuous with otic and supraorbital sensory canals at their union.
Sensory canal lateral or ventral to and in close proximity to the otic and supraorbital sensory canals at their union. The infraorbital sensory canal is bilaterally paired and associated with the infraorbital bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infraorbital canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001811
infraorbital canal
Sensory canal lateral or ventral to and in close proximity to the otic and supraorbital sensory canals at their union. The infraorbital sensory canal is bilaterally paired and associated with the infraorbital bones.
TAO:wd
preoperculo-mandibular sensory canal
May be continuous with the otic and post-otic sensory canals at their union.
Sensory canal lateral or ventral to and in close proximity to the otic and post-otic sensory canals at their union. The preoperculo-mandibular sensory canal is bilaterally paired and associated with the preopercle, angular and dentary bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
preoperculo-mandibular canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001812
preoperculo-mandibular canal
Sensory canal lateral or ventral to and in close proximity to the otic and post-otic sensory canals at their union. The preoperculo-mandibular sensory canal is bilaterally paired and associated with the preopercle, angular and dentary bones.
TAO:wd
preopercular sensory canal
May be continuous with the otic and post-otic sensory canals at their union.
Sensory canal lateral or ventral to and in close proximity with the otic and post-otic sensory canals at their union, and anteroventrally with the mandibular sensory canal. The preopercular sensory canal is bilaterally paired and associated with the preopercle bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sensory canal lateral or ventral to and in close proximity with the otic and post-otic sensory canals at their union, and anteroventrally with the mandibular sensory canal. The preopercular sensory canal is bilaterally paired and associated with the preopercle bone.
TAO:wd
mandibular sensory canal
May be continuous with the preoperculo-mandibular sensory canal.
Sensory canal anterior and ventral to and in close proximity with the preoperculo-mandibular sensory canal. The mandible sensory canal is bilaterally paired and associated with the angular and dentary bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mandibular canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001814
mandibular canal
Sensory canal anterior and ventral to and in close proximity with the preoperculo-mandibular sensory canal. The mandible sensory canal is bilaterally paired and associated with the angular and dentary bones.
TAO:wd
nuchal plate
Dermal bone that is a bony expansion in the integument anterior to or flanking the dorsal fin that is part of and at the distal end of a supraneural or dorsal fin proximal radial.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is a bony expansion in the integument anterior to or flanking the dorsal fin that is part of and at the distal end of a supraneural or dorsal fin proximal radial.
TAO:wd
anterior nuchal plate
Nuchal plate that is unpaired and part of the supraneural and in contact, or not, with the supraoccipital crest anteriorly and middle nuchal plate posteriorly.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
first nuchal plate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001816
first nuchal plate
Nuchal plate that is unpaired and part of the supraneural and in contact, or not, with the supraoccipital crest anteriorly and middle nuchal plate posteriorly.
TAO:wd
true
middle nuchal plate
Nuchal plate that is unpaired and part of dorsal fin proximal radial 1 and usually in contact with the anterior nuchal plate and paired posterior nuchal plates.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
median nuchal plate
second nuchal plate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001817
median nuchal plate
true
Nuchal plate that is unpaired and part of dorsal fin proximal radial 1 and usually in contact with the anterior nuchal plate and paired posterior nuchal plates.
TAO:wd
TAO:0001817
second nuchal plate
dorsal fin proximal radial 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior nuchal plate
Paired nuchal plate that is part of dorsal fin proximal radial 2 and usually in contact with the middle nuchal plate.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
third nuchal plate
uberon/phenoscape-anatomy
true
Paired nuchal plate that is part of dorsal fin proximal radial 2 and usually in contact with the middle nuchal plate.
TAO:wd
TAO:0001820
third nuchal plate
notochord posterior region
Portion of tissue that is part of the caudal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of tissue that is part of the caudal fin.
TAO:wd
true
true
epibranchial 3 bone uncinate process
Epibranchial uncinate process that is part of epibranchial 3 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial uncinate process that is part of epibranchial 3 bone.
TAO:wd
epibranchial 4 bone uncinate process
Epibranchial uncinate process that is part of epibranchial 4 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Epibranchial uncinate process that is part of epibranchial 4 bone.
TAO:wd
lateral line scale
Scale that is associated with the lateral line sensory canal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scale that is associated with the lateral line sensory canal.
TAO:wd
urohyal lateral process
Process that is part of the urohyal; it is the posterolaterally directed process located on the ventrolateral margin of urohyal. Urohyal lateral process is paired.
Synonyms: urohyal lateral lamella (Toledo-Piza 2007; Zanata and Vari 2005)
urohyal ventral wing (Castro and Vari 2004).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
urohyal lateral lamella
urohyal ventral wing
branche ventrale de l'urohyal
processus hyo-pelvien
true
true
Process that is part of the urohyal; it is the posterolaterally directed process located on the ventrolateral margin of urohyal. Urohyal lateral process is paired.
TAO:wd
true
PSPUB:0000164
branche ventrale de l'urohyal
TAO:0001825
urohyal ventral wing
TAO:0001825
urohyal lateral lamella
true
PSPUB:0000139
processus hyo-pelvien
urohyal median process
Process that is part of the urohyal; it is the posterodorsally directed and median process located on the dorsal margin of the urohyal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
Process that is part of the urohyal; it is the posterodorsally directed and median process located on the dorsal margin of the urohyal.
TAO:wd
true
premaxillary-maxillary ligament
Ligament that connects the premaxilla to the maxilla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ligament that connects the premaxilla to the maxilla.
TAO:wd
primordial ligament
Ligament that connects the maxilla with the lower jaw.
Synonym articular-maxillary ligament (Alexander 1964).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
articular-maxillary ligament
ligamentum primordiale
maxillo-mandibular ligament
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001828
ligamentum primordiale
Ligament that connects the maxilla with the lower jaw.
TAO:wd
TAO:0001828
articular-maxillary ligament
TAO:0001828
maxillo-mandibular ligament
caudal fin dorsal procurrent ray
Caudal procurrent ray that forms part of the anterior dorsal series of lepidotrichia of the caudal fin and may be associated with a neural spine or a epural or a uroneural. A pair of hemitrichia forms each ray.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2005262
dorsal caudal procurrent ray
dorsal procurrent caudal-fin ray
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal procurrent ray that forms part of the anterior dorsal series of lepidotrichia of the caudal fin and may be associated with a neural spine or a epural or a uroneural. A pair of hemitrichia forms each ray.
TAO:Arratia_2008
TAO:wd
TAO:0001829
dorsal procurrent caudal-fin ray
TAO:0001829
dorsal caudal procurrent ray
caudal fin ventral procurrent ray
Caudal procurrent ray that forms part of the anterior ventral series of lepidotrichia of the caudal fin that may be associated with a neural spine or a epural or an uroneural (dorsal series) and with a hemal spine of a preural vertebra (ventral series). A caudal procurrent ray is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2005263
precurrent ray
rudimentary ray
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral caudal procurrent ray
ventral procurrent caudal-fin ray
ventral procurrent ray
TAO:0001830
precurrent ray
TAO:0001830
ventral procurrent ray
TAO:0001830
rudimentary ray
Caudal procurrent ray that forms part of the anterior ventral series of lepidotrichia of the caudal fin that may be associated with a neural spine or a epural or an uroneural (dorsal series) and with a hemal spine of a preural vertebra (ventral series). A caudal procurrent ray is an unpaired median bone.
TAO:Arratia_2008
TAO:wd
TAO:0001830
ventral procurrent caudal-fin ray
TAO:0001830
ventral caudal procurrent ray
pterosphenoid-orbitosphenoid joint
Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired.
TAO:wd
parasphenoid-basioccipital joint
Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is unpaired.
TAO:wd
premaxillary tooth row
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth row that is on the premaxilla.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth row that is on the premaxilla.
tip
Anatomical point that is the apex of a projection or anything long and tapered; can be bony or cartilage
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
tips
uberon/phenoscape-anatomy
TAO:0001840
tips
Anatomical point that is the apex of a projection or anything long and tapered; can be bony or cartilage
TAO:wd
interhyal-epihyal joint
Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Logical definition to be added after generic element classes added to group/bone cartilage
Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired.
TAO:wd
epihyal-ceratohyal joint
Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired.
TAO:wd
ceratohyal-dorsal hypohyal joint
Joint that articulates the ceratohyal and dorsal hypohyal bones. Ceratohyal-dorsal hypohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the ceratohyal and dorsal hypohyal bones. Ceratohyal-dorsal hypohyal joint is paired.
TAO:wd
ceratohyal-ventral hypohyal joint
Joint that articulates the ceratohyal and ventral hypohyal bones. Ceratohyal-ventral hypohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the ceratohyal and ventral hypohyal bones. Ceratohyal-ventral hypohyal joint is paired.
TAO:wd
dorsal hypohyal-ventral hypohyal joint
Joint that articulates the dorsal hypohyal and ventral hypohyal bones. Dorsal hypohyal-ventral hypohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the dorsal hypohyal and ventral hypohyal bones. Dorsal hypohyal-ventral hypohyal joint is paired.
TAO:wd
inter-ventral hypohyal joint
Joint that articulates the contralateral ventral hypohyal bones or the contralateral ceratobranchial cartilages. Inter-ventral hypohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the contralateral ventral hypohyal bones or the contralateral ceratobranchial cartilages. Inter-ventral hypohyal joint is paired.
TAO:wd
dorsal hypohyal-urohyal joint
Joint that articulates the dorsal hypohyal and urohyal bones. Dorsal hypohyal-urohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the dorsal hypohyal and urohyal bones. Dorsal hypohyal-urohyal joint is paired.
TAO:wd
ventral hypohyal-urohyal joint
Joint that articulates the ventral hypohyal and urohyal bones. Ventral hypohyal-urohyal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the ventral hypohyal and urohyal bones. Ventral hypohyal-urohyal joint is paired.
TAO:wd
epihyal-branchiostegal ray joint
Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired.
TAO:wd
ceratohyal-branchiostegal ray joint
Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired.
TAO:wd
postcleithrum 1
Postcleithrum that anteriorly articulates with the supracleithrum and/or the cleithrum of the pectoral girdle; most dorsal element in a series of postcleithra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Postcleithrum that anteriorly articulates with the supracleithrum and/or the cleithrum of the pectoral girdle; most dorsal element in a series of postcleithra.
TAO:GA_TG
TAO:wd
postcleithrum 2
Postcleithrum that articulates dorsally with postcleithrum 1, ventrally with postcleithrum 3, and anteriorly with cleithrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Postcleithrum that articulates dorsally with postcleithrum 1, ventrally with postcleithrum 3, and anteriorly with cleithrum.
TAO:GA_TG
TAO:wd
postcleithrum 3
Postcleithrum that articulates dorsally with postcleithrum 2 and, sometimes, anteriorly with cleithrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Postcleithrum that articulates dorsally with postcleithrum 2 and, sometimes, anteriorly with cleithrum.
TAO:GA_TG
TAO:wd
hyomandibular condyle for the opercle
Process on the dorso-posterior margin of the hyomandibula cartilage or bone that articulates with a depression on the antero-dorsal margin of the opercle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
opercular process of hyomandibular
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process on the dorso-posterior margin of the hyomandibula cartilage or bone that articulates with a depression on the antero-dorsal margin of the opercle.
TAO:wd
TAO:0001855
opercular process of hyomandibular
true
gill ray
Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage.
TAO:wd
hyoidean artery
An artery that passes along the ventral portions of the hyoid arch; supplies oxygenated blood to the pseudobranch.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
An artery that passes along the ventral portions of the hyoid arch; supplies oxygenated blood to the pseudobranch.
TAO:wd
true
suprapharyngobranchial
A pharyngobranchial bone that articulates with the neurocranium dorsally and epibranchial 1 and pharyngobranchial 2 ventrally; lies dorsal to other elements of the dorsal portions of the branchial arches.
Articulates with the exoccipital or prootic depending on taxon.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial spiracle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001858
branchial spiracle
A pharyngobranchial bone that articulates with the neurocranium dorsally and epibranchial 1 and pharyngobranchial 2 ventrally; lies dorsal to other elements of the dorsal portions of the branchial arches.
TAO:wd
pharyngobranchial 1 tooth plate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 1 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngobranchial 1 toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001859
pharyngobranchial 1 toothplate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 1 bone.
TAO:wd
epibranchial 4-upper pharyngeal toothplate joint
Joint that articulates the epibranchial 4 cartilage or bone and upper pharyngeal toothplate. Epibranchial 4-upper pharyngeal toothplate joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the epibranchial 4 cartilage or bone and upper pharyngeal toothplate. Epibranchial 4-upper pharyngeal toothplate joint is paired.
TAO:wd
epibranchial 3-pharyngobranchial 3 joint
Joint that articulates the epibranchial 3 cartilage or bone and pharyngobranchial 3 cartilage or bone. Epibranchial 3-pharyngobranchial 3 joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the epibranchial 3 cartilage or bone and pharyngobranchial 3 cartilage or bone. Epibranchial 3-pharyngobranchial 3 joint is paired.
TAO:wd
epibranchial 3-pharyngobranchial 4 joint
Joint that articulates the epibranchial 3 cartilage or bone and pharyngobranchial 4 cartilage or bone. Epibranchial 3-pharyngobranchial 4 joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the epibranchial 3 cartilage or bone and pharyngobranchial 4 cartilage or bone. Epibranchial 3-pharyngobranchial 4 joint is paired.
TAO:wd
inter-hypobranchial 3 joint
Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired.
TAO:wd
basibranchial 1 cartilage
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 1 (pharyngeal arch 3).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 1 (pharyngeal arch 3).
TAO:wd
basibranchial 4 cartilage
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 4 (pharyngeal arch 6).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 4 (pharyngeal arch 6).
TAO:wd
true
basibranchial 5 cartilage
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 5 (pharyngeal arch 7).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 5 (pharyngeal arch 7).
TAO:wd
post-ceratobranchial cartilage
Pharyngeal arch cartilage that is ventral, median, and at or posterior to the juncture of the bilaterally paired ceratobranchial 5 cartilage or bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basibranchial 6
copula 4
pericardial cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001867
basibranchial 6
TAO:0001867
copula 4
TAO:0001867
pericardial cartilage
Pharyngeal arch cartilage that is ventral, median, and at or posterior to the juncture of the bilaterally paired ceratobranchial 5 cartilage or bone.
TAO:wd
supraneural 2 cartilage
Postcranial axial cartilage located dorsal to vertebra 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Postcranial axial cartilage located dorsal to vertebra 2.
TAO:wd
supraneural 3 cartilage
Postcranial axial cartilage located dorsal to vertebrae 3 and 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Postcranial axial cartilage located dorsal to vertebrae 3 and 4.
TAO:wd
Weberian ossicle set
Anatomical cluster that consists of the Weberian ossicles.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that consists of the Weberian ossicles.
TAO:wd
true
trunk sensory canal system
Lateral line system on trunk.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lateral line system on trunk.
TAO:wd
head sensory canal system
Lateral line system on head and pectoral girdle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cephalic sensory canal system
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lateral line system on head and pectoral girdle.
TAO:wd
TAO:0001873
cephalic sensory canal system
basibranchial 2 cartilage
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 2 (pharyngeal arch 4).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 2 (pharyngeal arch 4).
TAO:wd
true
opercular series
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
basibranchial 3 cartilage
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 3 (pharyngeal arch 5).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal arch cartilage that is ventral, median, and associated with branchial arch 3 (pharyngeal arch 5).
TAO:wd
true
neural arch 1
Neural arch that is the anteriormost neural arch.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural arch that is the anteriormost neural arch.
TAO:wd
rib of vertebra 2
Rib that articulates with the parapophysis of the second centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rib that articulates with the parapophysis of the second centrum.
TAO:wd
rib of vertebra 1
Rib that articulates with the parapophysis of the first centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rib that articulates with the parapophysis of the first centrum.
TAO:wd
rib of vertebra 3
Rib that articulates with the parapophysis of the third centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rib that articulates with the parapophysis of the third centrum.
TAO:wd
rib of vertebra 4
Rib that articulates with the parapophysis of the fourth centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Rib that articulates with the parapophysis of the fourth centrum.
TAO:wd
parapophysis + rib of vertebra 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
parapophysis + rib of vertebra 3 + rib of vertebra 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
accessory neural arch
Definition from de Pinna and Grande (2003).
Neural arch that is located posterior to the neurocranium and anterior to neural arch 1. The accessory neural arch is not associated with a vertebral centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural arch that is located posterior to the neurocranium and anterior to neural arch 1. The accessory neural arch is not associated with a vertebral centrum.
TAO:wd
neural spine 1
Neural spine that is associated with the first vertebra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural spine that is associated with the first vertebra.
TAO:wd
neural spine 2
Neural spine that is associated with the second vertebra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural spine that is associated with the second vertebra.
TAO:wd
neural spine 3
Neural spine that is associated with the third vertebra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural spine that is associated with the third vertebra.
TAO:wd
supraneural 1 bone
Supraneural bone located dorsal to vertebra 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Supraneural bone located dorsal to vertebra 1.
TAO:wd
supraneural 1 cartilage
Postcranial axial cartilage located dorsal to vertebra 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Postcranial axial cartilage located dorsal to vertebra 1.
TAO:wd
interhyal element
Skeletal element that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Skeletal element that is bilaterally paired and articulates dorsally with the hyosymplectic cartilage or the articulation of the hyomandibula and symplectic.
TAO:wd
hypobranchial element
Skeletal element that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is bilaterally paired and articulates medially with a median skeletal element and laterally with a ceratobranchial element.
TAO:wd
true
hypobranchial 1 element
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 1 element laterally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 1 element laterally.
TAO:wd
hypobranchial 2 element
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 2 element laterally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 2 element laterally.
TAO:wd
hypobranchial 3 element
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 3 element laterally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 3 element laterally.
TAO:wd
hypobranchial 4 element
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 4 element laterally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is ventral, bilaterally paired and articulates with a median skeletal element medially and with a ceratobranchial 4 element laterally.
TAO:wd
ceratobranchial element
Skeletal element that is bilaterally paired and forms part of the ventral branchial arches.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is bilaterally paired and forms part of the ventral branchial arches.
TAO:wd
true
ceratobranchial 1 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ceratobranchial 2 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ceratobranchial 3 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ceratobranchial 4 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ceratobranchial 5 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epibranchial element
Skeletal element that is bilaterally paired and articulates laterally with ceratobranchial element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epibranchial elements
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is bilaterally paired and articulates laterally with ceratobranchial element.
TAO:wd
TAO:0001904
epibranchial elements
true
epibranchial 1 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epibranchial 2 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epibranchial 3 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epibranchial 4 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pharyngobranchial element
Skeletal element of the branchial arches located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element of the branchial arches located medial to the epibranchials.
TAO:wd
true
pharyngobranchial 1 element
Most anterior pharyngobranchial element, located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Most anterior pharyngobranchial element, located medial to the epibranchials.
TAO:wd
pharyngobranchial 2 element
Pharyngobranchial element, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngobranchial element, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 1 element.
TAO:wd
pharyngobranchial 3 element
Pharyngobranchial element, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngobranchial element, located medial to the epibranchials and posteriorly adjacent to pharyngobranchial 2 element.
TAO:wd
pharyngobranchial 4 element
Most posterior pharyngobranchial element, located medial to the epibranchials.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
infrapharyngobranchial 4 element
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001913
infrapharyngobranchial 4 element
Most posterior pharyngobranchial element, located medial to the epibranchials.
TAO:wd
obsolete basibranchial element
Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
UBERON:0004740
Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton.
TAO:wd
basibranchial 1 element
Skeletal element that is median and associated with branchial arch 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is median and associated with branchial arch 1.
TAO:wd
basibranchial 2 element
Skeletal element that is median and associated with branchial arch 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is median and associated with branchial arch 2.
TAO:wd
basibranchial 3 element
Skeletal element that is median and associated with branchial arch 3.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is median and associated with branchial arch 3.
TAO:wd
basibranchial 4 element
Skeletal element that is median and associated with branchial arch 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is median and associated with branchial arch 4.
TAO:wd
basibranchial 5 element
Skeletal element that is median and associated with branchial arch 5.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Skeletal element that is median and associated with branchial arch 5.
TAO:wd
pseudotympanum
Anatomical structure that is formed as a hiatus in the muscles covering the anterior chamber of the swim bladder in the area of ribs 5 and 6.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
humeral hiatus
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical structure that is formed as a hiatus in the muscles covering the anterior chamber of the swim bladder in the area of ribs 5 and 6.
TAO:wd
TAO:0001920
humeral hiatus
adipose eyelid
Surface structure that is a fleshy membrane covering part of the eye.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Surface structure that is a fleshy membrane covering part of the eye.
TAO:wd
inter-frontal joint
Joint between the left and right frontal bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
interfrontal suture
metopic suture
teleost_anatomy_curators
uberon/phenoscape-anatomy
ZFIN:ZDB-PUB-060323-12
interfrontal suture
Joint between the left and right frontal bone.
TAO:wd
ZFIN:ZDB-PUB-060323-12
metopic suture
aortic canal
Canal that houses the dorsal aorta.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Canal that houses the dorsal aorta.
TAO:wd
occipital artery foramen
Foramina that allow passage of occipital arteries.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramina that allow passage of occipital arteries.
TAO:wd
spiracular canal
Foramen for passage of nerve supplying otic lateral line.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen for passage of nerve supplying otic lateral line.
TAO:wd
posterior myodome
Fossa or chamber on posterior portion of orbital region of neurocranium that serves as attachment site for posterior extrinsic eye muscles.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Fossa or chamber on posterior portion of orbital region of neurocranium that serves as attachment site for posterior extrinsic eye muscles.
TAO:wd
anterior myodome
Fossa or chamber on anterior portion of orbital region of neurocranium that serves as attachment site for anterior extrinsic eye musculature.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Fossa or chamber on anterior portion of orbital region of neurocranium that serves as attachment site for anterior extrinsic eye musculature.
TAO:wd
articular fossa of opercle
Fossa of opercle that articulates with hyomandibular condyle for opercle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Fossa of opercle that articulates with hyomandibular condyle for opercle.
TAO:wd
epioccipital posterior process
Process of the epioccipital that extends posteriorly, is laminar in form and is usually attached to Weberian apparatus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Process of the epioccipital that extends posteriorly, is laminar in form and is usually attached to Weberian apparatus.
TAO:wd
true
true
accessory vomerine tooth plate
Accessory vomerine tooth plate is not synonymous with dermopalatine tooth plate, palatine tooth plate, or pterygoid tooth plate.
Dermal bone that is located lateral to vomer off midline of palate. Accessory vomerine tooth plate bears teeth and may be present as one or more pairs.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is located lateral to vomer off midline of palate. Accessory vomerine tooth plate bears teeth and may be present as one or more pairs.
TAO:wd
true
infranuchal scute
Scute that is an elongated plate associated with a ligament running between posterior nuchal plate and rib on vertebra 6. Infranuchal scute is paired and develops from its associated ligament and sensory canal tubular ossicle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scute that is an elongated plate associated with a ligament running between posterior nuchal plate and rib on vertebra 6. Infranuchal scute is paired and develops from its associated ligament and sensory canal tubular ossicle.
TAO:wd
sensory canal tubular ossicle
Dermal bone that is ring-shaped or cylindrical and surrounds a sensory canal.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is ring-shaped or cylindrical and surrounds a sensory canal.
TAO:wd
sensory canal tubule
Sensory canal that is a side branch between a sensory canal proximally and a pore at its distal end. Sensory canal tubule is bilaterally paired although often imperfectly so.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Sensory canal that is a side branch between a sensory canal proximally and a pore at its distal end. Sensory canal tubule is bilaterally paired although often imperfectly so.
TAO:wd
rostral plate
Dermal bone that is located on midline of snout in skin above mesethmoid and lateral ethmoid bones. Rostral plate bears type 1 odontodes and is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is located on midline of snout in skin above mesethmoid and lateral ethmoid bones. Rostral plate bears type 1 odontodes and is unpaired.
TAO:wd
true
oral disk
Lip that is expanded to form a broad, rounded cup around the mouth.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lip that is expanded to form a broad, rounded cup around the mouth.
TAO:wd
posterior nasal barbel
Barbel that is attached to the anterior rim of the posterior nostril. Posterior nasal barbel is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Barbel that is attached to the anterior rim of the posterior nostril. Posterior nasal barbel is paired.
TAO:wd
anterior nasal barbel
Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired.
TAO:wd
maxillary barbel
Barbel that is attached to the distal end of the maxilla and that originates on the side of the mouth. Maxillary barbel is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Barbel that is attached to the distal end of the maxilla and that originates on the side of the mouth. Maxillary barbel is paired.
TAO:wd
inter-basipterygium joint
Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pelvic girdle symphysis
pelvic symphysis
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001939
pelvic symphysis
TAO:0001939
pelvic girdle symphysis
Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired.
TAO:wd
vertebra 4-vertebra 5 joint
Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5.
TAO:wd
orbitosphenoid-lateral ethmoid joint
Joint that articulates the orbitosphenoid cartilage or bone and lateral ethmoid cartilage or bone. Orbitosphenoid-lateral ethmoid joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the orbitosphenoid cartilage or bone and lateral ethmoid cartilage or bone. Orbitosphenoid-lateral ethmoid joint is paired.
TAO:wd
autopalatine-maxillary joint
Joint that articulates the autopalatine cartilage or bone and maxilla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the autopalatine cartilage or bone and maxilla.
TAO:wd
metapterygoid-autopalatine ligament
Ligament that connects the metapterygoid to the autopalatine.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ligament that connects the metapterygoid to the autopalatine.
TAO:wd
lateral ethmoid-autopalatine ligament
Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine.
TAO:wd
mesethmoid-premaxillary ligament
Mesethmoid-premaxillary ligament is a ligament that connects the mesethmoid to the premaxilla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Mesethmoid-premaxillary ligament is a ligament that connects the mesethmoid to the premaxilla.
TAO:wd
mesethmoid-maxillary ligament
Mesethmoid-maxillary ligament is a ligament that connects the mesethmoid to the maxilla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Mesethmoid-maxillary ligament is a ligament that connects the mesethmoid to the maxilla.
TAO:wd
hyomandibular-otic region joint
Joint that articulates the hyomandibular cartilage or bone and otic region cartilage or sphenotic bone, and often pterotic bone and prootic bone. Hyomandibular-otic region joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the hyomandibular cartilage or bone and otic region cartilage or sphenotic bone, and often pterotic bone and prootic bone. Hyomandibular-otic region joint is paired.
TAO:wd
anal-fin hook
Process that is part of the anal fin lepidotrichium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin hook
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
TAO:0001948
anal fin hook
Process that is part of the anal fin lepidotrichium.
TAO:wd
true
caudal-fin hook
Caudal fin hook is found in some characiform fishes.
Process that is part of the caudal fin lepidotrichium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin hook
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Process that is part of the caudal fin lepidotrichium.
TAO:wd
TAO:0001949
caudal fin hook
true
true
inter-premaxillary joint
Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired.
TAO:wd
skin flap
Surface structure that is a portion of skin that projects or hangs from the body.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Surface structure that is a portion of skin that projects or hangs from the body.
TAO:wd
dentary tooth row
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth row that is on the dentary.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth row that is on the dentary.
cranial muscle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete pigmentation
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
body pigmentation
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0001955
body pigmentation
epibranchial 1 bone proximal cartilage
Pharyngeal cartilage that is part of and at the proximal end of epibranchial 1 bone, and that usually articulates with a pharyngobranchial element. Epibranchial 1 bone proximal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epibranchial 1 anterior cartilage
epibranchial 1 mesial cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001956
epibranchial 1 anterior cartilage
TAO:0001956
epibranchial 1 mesial cartilage
Pharyngeal cartilage that is part of and at the proximal end of epibranchial 1 bone, and that usually articulates with a pharyngobranchial element. Epibranchial 1 bone proximal cartilage is paired.
TAO:wd
epibranchial 2 bone proximal cartilage
Pharyngeal cartilage that is part of and at the proximal end of epibranchial 2 bone, and that usually articulates with a pharyngobranchial element. Epibranchial 2 bone proximal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epibranchial 2 anterior cartilage
epibranchial 2 mesial cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001957
epibranchial 2 anterior cartilage
Pharyngeal cartilage that is part of and at the proximal end of epibranchial 2 bone, and that usually articulates with a pharyngobranchial element. Epibranchial 2 bone proximal cartilage is paired.
TAO:w
TAO:0001957
epibranchial 2 mesial cartilage
ceratobranchial 3 bone distal cartilage
Pharynbeal cartilage that is part of and at the distal end of ceratobranchial 3 bone, and that usually articulates with epibranchial 3 element. Ceratobranchial 3 bone distal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ceratobranchial 3 bone lateral cartilage
ceratobranchial 3 bone posterior cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001958
ceratobranchial 3 bone lateral cartilage
Pharynbeal cartilage that is part of and at the distal end of ceratobranchial 3 bone, and that usually articulates with epibranchial 3 element. Ceratobranchial 3 bone distal cartilage is paired.
TAO:wd
true
TAO:0001958
ceratobranchial 3 bone posterior cartilage
ceratobranchial 4 bone proximal cartilage
Pharyngeal cartilage that is part of and at the proximal end of ceratobranchial 4 bone, and that usually articulates with basibranchial 4 element. Ceratobranchial 4 proximal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ceratobranchial 4 bone anterior cartilage
ceratobranchial 4 bone mesial cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal cartilage that is part of and at the proximal end of ceratobranchial 4 bone, and that usually articulates with basibranchial 4 element. Ceratobranchial 4 proximal cartilage is paired.
TAO:wd
true
TAO:0001959
ceratobranchial 4 bone mesial cartilage
TAO:0001959
ceratobranchial 4 bone anterior cartilage
ceratobranchial 4 bone distal cartilage
Pharyngeal cartilage that is part of and at the distal end of ceratobranchial 4 bone, and that usually articulates with epibranchial 4 element. Ceratobranchial 4 distal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ceratobranchial 4 bone lateral cartilage
ceratobranchial 4 bone posterior cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal cartilage that is part of and at the distal end of ceratobranchial 4 bone, and that usually articulates with epibranchial 4 element. Ceratobranchial 4 distal cartilage is paired.
TAO:wd
TAO:0001960
ceratobranchial 4 bone posterior cartilage
true
TAO:0001960
ceratobranchial 4 bone lateral cartilage
ceratobranchial 5 bone distal cartilage
Pharyngeal cartilage that is part of and at the distal end of ceratobranchial 5 bone. Ceratobranchial 5 bone distal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ceratobranchial 5 bone lateral cartilage
ceratobranchial 5 bone posterior cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001961
ceratobranchial 5 bone lateral cartilage
Pharyngeal cartilage that is part of and at the distal end of ceratobranchial 5 bone. Ceratobranchial 5 bone distal cartilage is paired.
TAO:wd
true
TAO:0001961
ceratobranchial 5 bone posterior cartilage
hypobranchial 1 bone distal cartilage
Pharyngeal cartilage that is part of and at the distal end of hypobranchial 1 bone, and that usually articulates with ceratobranchial 1 element. Hypobranchial 1 bone distal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypobranchial 1 bone lateral cartilage
hypobranchial 1 bone posterior cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001962
hypobranchial 1 bone lateral cartilage
TAO:0001962
hypobranchial 1 bone posterior cartilage
Pharyngeal cartilage that is part of and at the distal end of hypobranchial 1 bone, and that usually articulates with ceratobranchial 1 element. Hypobranchial 1 bone distal cartilage is paired.
TAO:wd
hypobranchial 2 bone distal cartilage
Pharyngeal cartilage that is part of and at the distal end of hypobranchial 2 bone, and that usually articulates with ceratobranchial 2 element. Hypobranchial 2 bone distal cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypobranchial 2 bone lateral cartilage
hypobranchial 2 bone posterior cartilage
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001963
hypobranchial 2 bone posterior cartilage
Pharyngeal cartilage that is part of and at the distal end of hypobranchial 2 bone, and that usually articulates with ceratobranchial 2 element. Hypobranchial 2 bone distal cartilage is paired.
TAO:wd
TAO:0001963
hypobranchial 2 bone lateral cartilage
epibranchial 3 bone uncinate process cartilage
Pharyngeal cartilage that is part of and at the distal end of epibranchial bone 3 uncinate process. epibranchial bone 3 uncinate process cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal cartilage that is part of and at the distal end of epibranchial bone 3 uncinate process. epibranchial bone 3 uncinate process cartilage is paired.
TAO:wd
epibranchial 4 bone uncinate process cartilage
Pharyngeal cartilage that is part of and at the distal end of epibranchial bone 4 uncinate process. Epibranchial bone 4 uncinate process cartilage is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pharyngeal cartilage that is part of and at the distal end of epibranchial bone 4 uncinate process. Epibranchial bone 4 uncinate process cartilage is paired.
TAO:wd
epibranchial 5 element
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
orbit
Anatomical space that is the concavity containing the eye.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical space that is the concavity containing the eye.
TAO:wd
outer mental barbel
Mental barbel that originates on the chin, in a posterolateral position relative to the inner mental barbel.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Mental barbel that originates on the chin, in a posterolateral position relative to the inner mental barbel.
TAO:wd
inner mental barbel
Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel.
TAO:wd
parapophysis 4
Parapophysis that is the lateral projection from the fourth centrum. Parapophysis 4 is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Parapophysis that is the lateral projection from the fourth centrum. Parapophysis 4 is bilaterally paired.
TAO:wd
intercostal ligament
Ligament that connects one rib to another.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ligament that connects one rib to another.
TAO:wd
subtemporal fossa
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
suprabranchial artery
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
interorbital septum
Anatomical cluster composed of one or more bones and tissue that separates the orbits.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster composed of one or more bones and tissue that separates the orbits.
TAO:wd
pad
Surface structure that is a portion of the integument thickened relative to surrounding area.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pads
teleost_anatomy_curators
uberon/phenoscape-anatomy
Surface structure that is a portion of the integument thickened relative to surrounding area.
TAO:wd
TAO:0001977
pads
maxillary tooth row
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth row that is on the maxilla.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Tooth row that is on the maxilla.
hyomandibula-metapterygoid joint
Joint that articulates the hyomandibula bone and metapterygoid bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the hyomandibula bone and metapterygoid bone.
TAO:wd
vertebral element 6
6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 5.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 5.
vertebral element 7
7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 6.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 6.
vertebral element 8
8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 7.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 7.
centrum 1
Centrum that is part of vertebra 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Centrum that is part of vertebra 1.
TAO:wd
true
centrum 2
Centrum that is part of vertebra 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Centrum that is part of vertebra 2.
TAO:wd
centrum 3
Centrum that is part of vertebra 3.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Centrum that is part of vertebra 3.
TAO:wd
centrum 4
Centrum that is part of vertebra 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Centrum that is part of vertebra 4.
TAO:wd
centrum 5
Centrum that is part of vertebra 5.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Centrum that is part of vertebra 5.
TAO:wd
centrum 6
Centrum that is part of vertebra 6.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Centrum that is part of vertebra 6.
TAO:wd
mandibular-hyoid median cartilage
Pharyngeal arch cartilage that is a spherical mass of cartilage located between the mandibular symphysis and ventral hyoid arch. Mandibular-hyoid median cartilage is unpaired.
Schaefer, S. 1990. (Anatomy and relationships of the scoloplacid catfishes. Proc. Acad. Nat. Sci. Phil. 142: 167-210) described this structure in certain catfishes and applied the name hyomandibular cartilage. To avoid possible confusion of this structure with the hyomandibular cartilage (or bone) of the suspensorium, the term mandibular-hyoid median cartilage is used here.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hyomandibular cartilage sensu Schaefer (1990)
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001989
hyomandibular cartilage sensu Schaefer (1990)
Pharyngeal arch cartilage that is a spherical mass of cartilage located between the mandibular symphysis and ventral hyoid arch. Mandibular-hyoid median cartilage is unpaired.
TAO:wd
epibranchial arborescent organ
Anatomical cluster that is an outgrowth of the soft tissue around the dorsolateral corner of a branchial arch that is internally supported by a core of rigid cartilage-like tissue. Epibranchial arborescent organ is paired.
Greenwood, P. H. 1961 (A revision of the genus Dinotopterus Blgr. (pisces, Clariidae) with notes on the comparative anatomy of the suprabranchial organs in the Clariidae. Bull. British Mus (Nat. His.), Zool. 7(4): 217-241.) described this structure in certain catfishes and applied the term suprabranchial organ to it. To avoid possible confusion with distinctly different structures bearing the name suprabranchial organs in other teleosts, the term epibranchial arborescent organ is used here following the lead of de Pinna 1993.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
suprabranchial organ
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that is an outgrowth of the soft tissue around the dorsolateral corner of a branchial arch that is internally supported by a core of rigid cartilage-like tissue. Epibranchial arborescent organ is paired.
TAO:wd
TAO:0001990
suprabranchial organ
true
lateral bone
Membrane bone extending between a transverse process of the second proximal dorsal-fin radial and the pleural rib of the sixth vertebra. Lateral bone is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Membrane bone extending between a transverse process of the second proximal dorsal-fin radial and the pleural rib of the sixth vertebra. Lateral bone is paired.
TAO:wd
branched anal fin ray
Anal fin lepidotrichium that is distally branched.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin branched ray
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anal fin lepidotrichium that is distally branched.
TAO:wd
TAO:0001992
anal fin branched ray
branched pectoral fin ray
Pectoral fin lepidotrichium that is distally branched and segmented.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin branched ray
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001993
pectoral fin branched ray
Pectoral fin lepidotrichium that is distally branched and segmented.
TAO:wd
gill raker row
Anatomical cluster that consists of adjacent gill rakers constituting a row and is part of a ceratobranchial or epibranchial element of the branchial arches. Gill raker row is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that consists of adjacent gill rakers constituting a row and is part of a ceratobranchial or epibranchial element of the branchial arches. Gill raker row is paired.
TAO:wd
true
papilla
Surface structure that is a small, fleshy protuberance.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dermal papilla
papillae
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0001995
papillae
Surface structure that is a small, fleshy protuberance.
TAO:wd
TAO:0001995
dermal papilla
maxillary canal
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
parietal-supraoccipital
A parietal-supraoccipital or parieto-supraoccipital bone is an element present in Siluriformes.
Compound dermal and endochondral bone that results from the fusion of the paired dermal parietal bones and the median endodermal supraoccipital. Forms the dorso-posterior element of the dermatocranium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
parieto-supraoccipital
supraoccipital
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0001997
supraoccipital
Compound dermal and endochondral bone that results from the fusion of the paired dermal parietal bones and the median endodermal supraoccipital. Forms the dorso-posterior element of the dermatocranium.
TAO:GA_TG
TAO:0001997
parieto-supraoccipital
posttemporal-supracleithrum
A posttemporo-supracleithrum is a bone present in Siluriformes. There are different opinions if this is the result of an ontogenetic or a phylogenetic fusion or the loss or one or other bone.
Dermal bone that results from the fusion of the dermal posttemporal and the dermal supracleithrum. Forms the upper skeletal element of the pectoral girdle between the cleithrum and neurocranium. Posttemporal-supracleithrum is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
postemporo-supracleithrum
posttemporal
posttemporo-supracleithrum
supracleithrum
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Dermal bone that results from the fusion of the dermal posttemporal and the dermal supracleithrum. Forms the upper skeletal element of the pectoral girdle between the cleithrum and neurocranium. Posttemporal-supracleithrum is paired.
TAO:wd
TAO:0001998
postemporo-supracleithrum
TAO:0001998
posttemporal
TAO:0001998
supracleithrum
TAO:0001998
posttemporo-supracleithrum
posterior cleithral process
Process arising from the posterior or postero-dorsal margin of the cleithrum dorsally adjacent to the insertion of the pectoral fin. Posterior cleithral process is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
humeral process
postcleithral process
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
Process arising from the posterior or postero-dorsal margin of the cleithrum dorsally adjacent to the insertion of the pectoral fin. Posterior cleithral process is paired.
TAO:wd
TAO:0001999
postcleithral process
TAO:0001999
humeral process
true
posterior dentation of pectoral fin spine
Process that is tooth-like or thorn-like and arising from the posteriorly-facing margin of the abducted pectoral spine.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin spine posterior dentation
posterior denticle of pectoral fin spine
posterior serration of pectoral fin spine
posterior thorn of pectoral fin spine
posterior tooth of pectoral fin spine
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is tooth-like or thorn-like and arising from the posteriorly-facing margin of the abducted pectoral spine.
TAO:wd
true
TAO:0002000
posterior denticle of pectoral fin spine
TAO:0002000
pectoral fin spine posterior dentation
true
true
TAO:0002000
posterior thorn of pectoral fin spine
true
TAO:0002000
posterior tooth of pectoral fin spine
TAO:0002000
posterior serration of pectoral fin spine
anterior dentation of pectoral fin spine
Process that is tooth- or thorn-like and arising from the anteriorly-facing margin of the abducted pectoral spine. Anterior dentation of pectoral fin spine is usually present on the proximal and/or middle section of the pectoral fin spine.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior denticle of pectoral fin spine
anterior serration of pectoral fin spine
anterior thorn of pectoral fin spine
anterior tooth of pectoral fin spine
pectoral fin spine anterior dentation
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002001
anterior thorn of pectoral fin spine
TAO:0002001
anterior denticle of pectoral fin spine
true
TAO:0002001
pectoral fin spine anterior dentation
true
true
true
TAO:0002001
anterior tooth of pectoral fin spine
TAO:0002001
anterior serration of pectoral fin spine
Process that is tooth- or thorn-like and arising from the anteriorly-facing margin of the abducted pectoral spine. Anterior dentation of pectoral fin spine is usually present on the proximal and/or middle section of the pectoral fin spine.
TAO:wd
anterior distal serration of pectoral fin spine
Process that is retrorse, thorn-like and arising from the anteriorly-facing margin of the abducted pectoral spine. Anterior distal serration of pectoral fin spine is usually present on the distal section of the pectoral fin spine.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior denticle of pectoral fin spine
anterior serration of pectoral fin spine
anterior thorn of pectoral fin spine
anterior tooth of pectoral fin spine
pectoral fin spine anterior distal serration
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002002
anterior thorn of pectoral fin spine
TAO:0002002
anterior tooth of pectoral fin spine
Process that is retrorse, thorn-like and arising from the anteriorly-facing margin of the abducted pectoral spine. Anterior distal serration of pectoral fin spine is usually present on the distal section of the pectoral fin spine.
TAO:wd
true
TAO:0002002
anterior denticle of pectoral fin spine
true
TAO:0002002
pectoral fin spine anterior distal serration
true
TAO:0002002
anterior serration of pectoral fin spine
true
posterior dentation of dorsal fin spine 2
Process that is tooth or thorn-like and arising from the posteriorly-facing margin of the abducted dorsal-fin spine 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal fin spine 2 posterior dentation
posterior denticle of dorsal fin spine 2
posterior serration of dorsal fin spine 2
posterior thorn of dorsal fin spine 2
posterior tooth of dorsal fin spine 2
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002003
posterior denticle of dorsal fin spine 2
true
true
true
TAO:0002003
dorsal fin spine 2 posterior dentation
TAO:0002003
posterior thorn of dorsal fin spine 2
true
Process that is tooth or thorn-like and arising from the posteriorly-facing margin of the abducted dorsal-fin spine 2.
TAO:wd
TAO:0002003
posterior serration of dorsal fin spine 2
TAO:0002003
posterior tooth of dorsal fin spine 2
anterior dentation of dorsal fin spine 2
Process that is tooth- or thorn-like and arising from the anteriorly-facing margin of the abducted dorsal-fin spine 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior denticle of dorsal fin spine 2
anterior serration of dorsal fin spine 2
anterior thorn of dorsal fin spine 2
anterior tooth of dorsal fin spine 2
dorsal fin spine 2 anterior dentation
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is tooth- or thorn-like and arising from the anteriorly-facing margin of the abducted dorsal-fin spine 2.
TAO:wd
TAO:0002004
anterior serration of dorsal fin spine 2
TAO:0002004
anterior tooth of dorsal fin spine 2
TAO:0002004
anterior thorn of dorsal fin spine 2
TAO:0002004
dorsal fin spine 2 anterior dentation
TAO:0002004
anterior denticle of dorsal fin spine 2
canal plate
Dermal bone that is ventral to the preopercle and bears a portion of the preopercular sensory canal.
The number of canal plates present can be variable.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is ventral to the preopercle and bears a portion of the preopercular sensory canal.
TAO:wd
axillary pore
Pore that is located ventral to the posterior cleithral process and medial to the pectoral fin. Axillary pore is at the end of a duct from an integumentary gland.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pore that is located ventral to the posterior cleithral process and medial to the pectoral fin. Axillary pore is at the end of a duct from an integumentary gland.
TAO:wd
supraneural 4 bone
Supraneural dorsal to neural spine 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Supraneural dorsal to neural spine 4.
TAO:wd
neural lamina
Neural lamina is a median, vertical ridge or bony septum between neural spine 3 and neural spine 4 on the dorsal side of the Weberian vertebra. Neural lamina is unpaired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Neural lamina is a median, vertical ridge or bony septum between neural spine 3 and neural spine 4 on the dorsal side of the Weberian vertebra. Neural lamina is unpaired.
TAO:wd
true
true
medial cartilage of palatine
Pharyngeal cartilage that caps the medial margin of the palatine at the autopalatine-lateral ethmoid joint.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Pharyngeal cartilage that caps the medial margin of the palatine at the autopalatine-lateral ethmoid joint.
TAO:wd
hyoideomandibular nerve
Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2.
TAO:wd
lateral fontanel of frontal
Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired.
Original reference: de Pinna MCC, Vari RP. 1995. Monophyly and phylogenetic diagnosis of the family Cetopsidae, with synonymization of the Helogenidae (Teleostei: Siluriformes). Smithsonian Contributions to Zoology 571: 1-26.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired.
TAO:wd
dentary foramen
Foramen located on the dentary for passage of the mandibular nerve.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen located on the dentary for passage of the mandibular nerve.
TAO:wd
ascending limb of ceratobranchial 5 bone
An ascending limb of the ceratobranchial is found in Cypriniformes.
Process that is the dorsally directed portion of ceratobranchial 5 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Process that is the dorsally directed portion of ceratobranchial 5 bone.
TAO:wd
ascending limb of ceratobranchial 5 cartilage
An ascending limb of the ceratobranchial is found in Cypriniformes.
Process that is the dorsally directed portion of ceratobranchial 5 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is the dorsally directed portion of ceratobranchial 5 cartilage.
TAO:wd
true
pharyngobranchial tooth plate
Dermal bone of upper pharyngeal arches associated with pharyngobranchial bones or cartilages, usually bearing teeth.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngobranchial toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone of upper pharyngeal arches associated with pharyngobranchial bones or cartilages, usually bearing teeth.
TAO:wd
TAO:0002015
pharyngobranchial toothplate
pharyngobranchial 4 tooth plate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngobranchial 4 toothplate
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002016
pharyngobranchial 4 toothplate
Pharyngeal tooth plate that lies ventral to pharyngobranchial 4.
TAO:wd
anterior limb of ceratobranchial 5 bone
Process that is the anterior and medially directed portion of ceratobranchial 5 bone part of ceratobranchial 5 bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term applies to cypriniform fishes.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Process that is the anterior and medially directed portion of ceratobranchial 5 bone part of ceratobranchial 5 bone.
TAO:wd
true
anterior limb of ceratobranchial 5 cartilage
Process that is the anterior and medially directed portion of ceratobranchial 5 cartilage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term applies to cypriniform fishes.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is the anterior and medially directed portion of ceratobranchial 5 cartilage.
TAO:wd
true
pterotic-posttemporal-supracleithrum
Bone that is a fusion of the pterotic, posttemporal, and supracleithrum bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pterotic-supracleithrum
teleost_anatomy_curators
uberon/phenoscape-anatomy
Bone that is a fusion of the pterotic, posttemporal, and supracleithrum bones.
TAO:wd
true
TAO:0002019
pterotic-supracleithrum
hypomaxilla
Dermal bone bearing teeth located between the distal end of the premaxilla and the middle of the maxilla. The hypomaxilla is a paired bone.
Hypomaxilla is a bone restricted to some clupeiforms. See Berry (1964) for a detailed account of the distribution of the hypomaxilla within clupeiforms and specifically in Herengula.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Dermal bone bearing teeth located between the distal end of the premaxilla and the middle of the maxilla. The hypomaxilla is a paired bone.
TAO:ga_tg
ascending process of the parasphenoid
Process that is the lateral projection of the parasphenoid arising and articulating with the more dorsal portions of the neurocranium, usually at the level of the prootic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ascending ramus of the parasphenoid
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002021
ascending ramus of the parasphenoid
true
true
true
true
Process that is the lateral projection of the parasphenoid arising and articulating with the more dorsal portions of the neurocranium, usually at the level of the prootic.
TAO:wd
dermethmoid
Dermal bone of the dorsal surface of the olfactory region. Dermethmoid can be paired or median.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone of the dorsal surface of the olfactory region. Dermethmoid can be paired or median.
TAO:wd
true
second preethmoid
Endochondral bone found between the preethmoid and maxilla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Endochondral bone found between the preethmoid and maxilla.
TAO:wd
mental barbel
Barbel that originates on the chin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Barbel that originates on the chin.
TAO:wd
pectoral fin proximal radial 1
Pectoral fin proximal radial that is the most anterior or dorsal pectoral fin radial.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
first pectoral basal radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin proximal radial that is the most anterior or dorsal pectoral fin radial.
TAO:GA_TG
TAO:wd
TAO:0002026
first pectoral basal radial
pectoral fin proximal radial 2
Pectoral fin proximal radial that is the second most anterior or dorsal pectoral fin radial.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
second pectoral basal radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin proximal radial that is the second most anterior or dorsal pectoral fin radial.
TAO:GA_TG
TAO:wd
TAO:0002027
second pectoral basal radial
pectoral fin proximal radial 3
Pectoral fin proximal radial that is the third most anterior or dorsal pectoral fin radial.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
third pectoral basal radial
uberon/phenoscape-anatomy
TAO:0002028
third pectoral basal radial
Pectoral fin proximal radial that is the third most anterior or dorsal pectoral fin radial.
TAO:GA_TG
TAO:wd
pectoral fin proximal radial 4
Pectoral fin proximal radial that is the fourth most anterior or dorsal pectoral fin radial.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fourth pectoral basal radial
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral fin proximal radial that is the fourth most anterior or dorsal pectoral fin radial.
TAO:GA_TG
TAO:wd
TAO:0002029
fourth pectoral basal radial
ventral keel of coracoid
Process on the ventral surface of the horizontal limb of the coracoid, close to and parallel to the coracoid-cleithrum joint. Ventral keel of coracoid is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process on the ventral surface of the horizontal limb of the coracoid, close to and parallel to the coracoid-cleithrum joint. Ventral keel of coracoid is paired.
TAO:wd
true
orbital foramen
Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal).
TAO:wd
lateral ethmoid-frontal joint
Joint that articulates the lateral ethmoid and frontal. lateral ethmoid-frontal joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the lateral ethmoid and frontal. lateral ethmoid-frontal joint is paired.
TAO:wd
prootic-pterosphenoid joint
Joint that articulates the prootic and pterosphenoid. prootic-pterosphenoid joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the prootic and pterosphenoid. prootic-pterosphenoid joint is paired.
TAO:wd
prootic-exoccipital joint
Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired.
TAO:wd
basioccipital-exoccipital joint
Joint that articulates the basioccipital and exoccipital. Basioccipital-exoccipital joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the basioccipital and exoccipital. Basioccipital-exoccipital joint is paired.
TAO:wd
dilatator fossa
Dilatator fossa is present in some characiform fishes.
Fossa located on the neurocranium that is formed from portions of the sphenotic, frontal and pterotic bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Fossa located on the neurocranium that is formed from portions of the sphenotic, frontal and pterotic bones.
TAO:wd
inter-coracoid joint
Joint between the right and left coracoid bones of the pectoral girdle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Joint between the right and left coracoid bones of the pectoral girdle.
TAO:wd
parapophysis 6
Parapophysis that is the lateral projection from the sixth centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Parapophysis that is the lateral projection from the sixth centrum.
TAO:wd
parapophysis 5
Parapophysis that is the lateral projection from the fifth centrum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Parapophysis that is the lateral projection from the fifth centrum.
TAO:wd
posterior limb of parapophysis 4
Process that arises and projects posterolaterally from parapophysis 4. Posterior limb of parapophysis 4 is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior branch of parapophysis 4
posterior wing of parapophysis 4
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002043
posterior wing of parapophysis 4
true
Process that arises and projects posterolaterally from parapophysis 4. Posterior limb of parapophysis 4 is bilaterally paired.
TAO:wd
true
TAO:0002043
posterior branch of parapophysis 4
anterior limb of parapophysis 4
Mullerian ramus
Müllerian ramus
Process that arises and projects anterolaterally from parapophysis 4. Anterior limb of parapophysis 4 is bilaterally paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior branch of parapophysis 4
anterior wing of parapophysis 4
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002044
anterior branch of parapophysis 4
TAO:0002044
anterior wing of parapophysis 4
true
Mullerian ramus
TAO:0002044
Process that arises and projects anterolaterally from parapophysis 4. Anterior limb of parapophysis 4 is bilaterally paired.
TAO:wd
Müllerian ramus
TAO:0002044
true
obsolete alarm substance cell
Epithelial cell that produces a chemical that triggers antipredator behavior.
replace with CL_0007021 once cl is released.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Epithelial cell that produces a chemical that triggers antipredator behavior.
TAO:wd
Schreckstoff
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Chemical substance that functions as an alarm signal.
W Dahdul
circulus
Fine ridge on surface of scale, often parallel to the circumference of scale.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
circuli
teleost_anatomy_curators
uberon/phenoscape-anatomy
crétule
PSPUB:0000149
crétule
TAO:0002051
circuli
Fine ridge on surface of scale, often parallel to the circumference of scale.
TAO:wd
prootic depression
Shallow area that exists on the prootic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Shallow area that exists on the prootic.
TAO:wd
bony plate
Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
armor
armor plate
osteoderms
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002053
osteoderms
TAO:0002053
armor
Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series.
TAO:wd
TAO:0002053
armor plate
vertebra 5-vertebra 6 joint
Joint between the centra, and sometimes the neural arches or parapophyses.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint between the centra, and sometimes the neural arches or parapophyses.
TAO:wd
vertebra 6 - vertebra 7 joint
Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7.
TAO:wd
hypural 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
gill opening
Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head.
In teleosts, there is typically a single gill opening posterior to the operculum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchial aperture
branchial opening
gill aperture
opercular opening
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002057
gill aperture
TAO:0002057
branchial aperture
TAO:0002057
opercular opening
TAO:0002057
branchial opening
Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head.
TAO:wd
Weberian complex centrum
Centrum that is the fusion of centra 2-4.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Centrum that is the fusion of centra 2-4.
TAO:wd
posttemporal-parietal joint
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
predorsal vertebra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is positioned between the vertebra immediately anterior to the first dorsal-fin pterygiophore to the anteriormost vertebra.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is positioned between the vertebra immediately anterior to the first dorsal-fin pterygiophore to the anteriormost vertebra.
branched caudal fin ray
Caudal fin lepidotrichium that is distally branched.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Caudal fin lepidotrichium that is distally branched.
TAO:wd
nuchal plate series
Anatomical cluster that consists of more than one type of nuchal plate in an individual.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Anatomical cluster that consists of more than one type of nuchal plate in an individual.
TAO:wd
uroneural 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Uroneural that is the anteriormost element of the uroneural series.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Uroneural that is the anteriormost element of the uroneural series.
ural centrum 1
A vertebral centrum that is immediately posterior to preural vertebra 1. Ural centrum 1 is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ural centrum 1 (polyural terminology) may articulate or fuse with its neural arch dorsally or the neural arch may be absent and with hypural 1 ventrally. Ural centrum 1 may be defined also as the first ural centrum bearing hypurals 1 and 2 (diural terminology).
teleost_anatomy_curators
uberon/phenoscape-anatomy
A vertebral centrum that is immediately posterior to preural vertebra 1. Ural centrum 1 is an unpaired median bone.
TAO:GA_TG
TAO:wd
true
true
auditory fenestra
Opening in the neurocranium to allow communication between the swimbladder and the inner ear.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Opening in the neurocranium to allow communication between the swimbladder and the inner ear.
TAO:wd
upper hypural set
Anatomical cluster including hypural 3 and more dorsal hypurals that supports the dorsal series of principal caudal lepidotrichia or rays. The upper hypural set articulates or fuses to ural centra 3, 4 or 5 (polyural terminology) or ural centrum 2 (diural terminology) depending on the teleost subgroup. The upper hypural set is composed of unpaired median bones.
The number of hypurals included in the upper hypural set differs among teleostean subgroups. In basal teleosts this may include hypurals 3 to 9 or 10, whereas in more advanced groups this many include hypurals 3 to 5 or even less.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
upper hypurals
TAO:0002067
upper hypurals
Anatomical cluster including hypural 3 and more dorsal hypurals that supports the dorsal series of principal caudal lepidotrichia or rays. The upper hypural set articulates or fuses to ural centra 3, 4 or 5 (polyural terminology) or ural centrum 2 (diural terminology) depending on the teleost subgroup. The upper hypural set is composed of unpaired median bones.
TAO:GA_TG
TAO:wd
lower hypural set
Anatomical cluster including hypurals 1 and 2 that supports part of the ventral principal caudal lepidotrichia or rays and that separates from the dorsal hypural set through the hypural diastema. The lower hypural set articulates or fuses to ural centra 1 and 2 (polyural terminology) or ural centrum 1 (diural terminology) depending on the teleost subgroup. The lower hypural set is composed of unpaired median bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lower hypurals
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster including hypurals 1 and 2 that supports part of the ventral principal caudal lepidotrichia or rays and that separates from the dorsal hypural set through the hypural diastema. The lower hypural set articulates or fuses to ural centra 1 and 2 (polyural terminology) or ural centrum 1 (diural terminology) depending on the teleost subgroup. The lower hypural set is composed of unpaired median bones.
TAO:GA_TG
TAO:wd
TAO:0002068
lower hypurals
distal cartilage of posterior process of basipterygium
Process that is cartilaginous and arises from the distal margin or tip of posterior process of basipterygium and projects posteriorly.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Process that is cartilaginous and arises from the distal margin or tip of posterior process of basipterygium and projects posteriorly.
TAO:wd
true
internal anterior process of basipterygium
Process that is bony and arises from anteromedial corner of basipterygium and projects anteriorly or anteromedially.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
internal anterior arm of basipterygium
internal arm of the basipterygium
mesial anterior arm of basipterygium
mesial anterior process of basipterygium
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002070
internal arm of the basipterygium
TAO:0002070
mesial anterior arm of basipterygium
true
true
Process that is bony and arises from anteromedial corner of basipterygium and projects anteriorly or anteromedially.
TAO:wd
TAO:0002070
internal anterior arm of basipterygium
TAO:0002070
mesial anterior process of basipterygium
distal cartilage of internal anterior process of basipterygium
Process that is cartilaginous and arises from the distal tip of internal anterior process of basipterygium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is cartilaginous and arises from the distal tip of internal anterior process of basipterygium.
TAO:wd
true
true
middle anterior process of basipterygium
Process that is bony and arises from anterior margin of basipterygium between internal anterior process of basipterygium and external anterior process of basipterygium. Middle anterior process of basipterygium projects anteriorly or anteromedially.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle anterior arm of basipterygium
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is bony and arises from anterior margin of basipterygium between internal anterior process of basipterygium and external anterior process of basipterygium. Middle anterior process of basipterygium projects anteriorly or anteromedially.
TAO:wd
TAO:0002072
middle anterior arm of basipterygium
true
true
distal cartilage of middle anterior process of basipterygium
Process that is cartilaginous and arises from the distal tip of middle anterior process of basipterygium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Process that is cartilaginous and arises from the distal tip of middle anterior process of basipterygium.
TAO:wd
external anterior process of basipterygium
Process that is bony and arises from anterolateral corner of basipterygium and projects anteriorly or anteromedially.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
external anterior arm of basipterygium
external arm of basipterygium
lateral anterior process of basipterygium
lateral pelvic process
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002074
external anterior arm of basipterygium
true
http://hdl.handle.net/10088/11710
lateral pelvic process
true
TAO:0002074
lateral anterior process of basipterygium
Process that is bony and arises from anterolateral corner of basipterygium and projects anteriorly or anteromedially.
TAO:wd
TAO:0002074
external arm of basipterygium
distal cartilage of external anterior process of basipterygium
Process that is cartilaginous and arises from the distal tip of external anterior process of basipterygium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Process that is cartilaginous and arises from the distal tip of external anterior process of basipterygium.
TAO:wd
lateral process of basipterygium
Process that is bony and arises from lateral margin of basipterygium lateral to pelvic fin lepidotrichium 1 and projects laterally or anterolaterally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterolateral process of basipterygium
teleost_anatomy_curators
uberon/phenoscape-anatomy
Process that is bony and arises from lateral margin of basipterygium lateral to pelvic fin lepidotrichium 1 and projects laterally or anterolaterally.
TAO:wd
TAO:0002076
posterolateral process of basipterygium
true
true
lateropterygium
Bone that is attached or adjacent to lateral margin of basipterygium and anterior to pelvic fin lepidotrichium 1. The lateropterygium is a paired bone.
The lateropterygium is present only in a few teleostean subgroups, e.g., some siluriforms.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Bone that is attached or adjacent to lateral margin of basipterygium and anterior to pelvic fin lepidotrichium 1. The lateropterygium is a paired bone.
TAO:wd
true
true
hypural plate
Perichondrally ossified bone that results from the fusion of two or more hypurals and support a variable number of principal caudal lepidotrichia. The hypural plate is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Perichondrally ossified bone that results from the fusion of two or more hypurals and support a variable number of principal caudal lepidotrichia. The hypural plate is an unpaired median bone.
TAO:GA_TG
leptocephalous larva
Larval stage in some teleosts before metomorphosis.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Larval stage in some teleosts before metomorphosis.
TAO:wd
spina occipitalis
Process that is a ventral projection from the supraoccipital that extends between the exoccipitals to the dorsal margin of the foramen magnum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Process that is a ventral projection from the supraoccipital that extends between the exoccipitals to the dorsal margin of the foramen magnum.
TAO:wd
true
basal fulcrum
Basal fulcra may precede the median fins or both of the paired and median fins. Basal fulcra may be lanceolate, leaf-like or arrow-like in shape. The series of basal fulcra may be formed by unpaired plus paired elements depending on the fish group. Most teleosts lack basal fulcra. For additional information on basal fulcra see Arratia (2008, 2009).
Fulcrum that is large, laterally expanded, paired or unpaired, scale-like, and that precedes the base of a fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
basal fulcra
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002082
basal fulcra
Fulcrum that is large, laterally expanded, paired or unpaired, scale-like, and that precedes the base of a fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235
PSPUB:0000171
TAO:GA_TG
fringing fulcrum
Fulcrum that is a small, paired dermal structure associated with the marginal, leading rays of paired and/or unpaired fins. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fringing fulcra
teleost_anatomy_curators
uberon/phenoscape-anatomy
Fulcrum that is a small, paired dermal structure associated with the marginal, leading rays of paired and/or unpaired fins. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
PSPUB:0000171
TAO:wd
TAO:0002083
fringing fulcra
pleurostyle
Postero-dorsal process of preural vertebra 1 or postero-dorsal process of the compound terminal centrum. The pleurostyle is a paired membrane bone.
The pleurostyle is currently interpreted as a modified pair of uroneurals that fuse to preural vertebra 1 or compound centrum early in ontogeny. However, it is unclear which pair of the series of uroneurals forms the pleurostyle in different teleost subgroups.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
uroneural
uroneural 1
Postero-dorsal process of preural vertebra 1 or postero-dorsal process of the compound terminal centrum. The pleurostyle is a paired membrane bone.
TAO:GA_TG
TAO:0002084
uroneural
TAO:0002084
uroneural 1
ural centrum
A ural centrum may be formed by a chordacentrum alone, or chordacentrum plus autocentrum or autocentrum alone depending on the teleost subgroup. An ural centrum may articulate or fuse with its neural arch dorsally or the neural arch my be absent and with a hypural ventrally. The term ural centrum was proposed by Nybelin (1963). For the composition and formation of caudal vertebrae and centra see Arratia (1991), Arratia and Schultze (1992) and Arratia et al. (2001).
A vertebral centrum that is posterior to preural vertebra 1 and consequently the most posterior vertebral centra. Ural centrum is a unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
A vertebral centrum that is posterior to preural vertebra 1 and consequently the most posterior vertebral centra. Ural centrum is a unpaired median bone.
TAO:GA_TG
pelvic axillary process
Anatomical cluster consisting of only a bony element or a combination of a bony element and one or more scales, or only modified scales, which lies in a fin fold at the base of the uppermost ray.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Anatomical cluster consisting of only a bony element or a combination of a bony element and one or more scales, or only modified scales, which lies in a fin fold at the base of the uppermost ray.
TAO:GA_TG
true
true
pectoral axillary process
For additional information see Arratia (1997).
Pectoral axillary process is an elongate structure formed by one or more additional postcleithra or modified scales or a combination of both, that is firmly attached to a skin fold above the articular condyle of the uppermost pectoral fin ray or lepidotrichium 1.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Pectoral axillary process is an elongate structure formed by one or more additional postcleithra or modified scales or a combination of both, that is firmly attached to a skin fold above the articular condyle of the uppermost pectoral fin ray or lepidotrichium 1.
TAO:GA_TG
TAO:wd
true
true
true
interhaemal bone
A small bone articulating distally with the haemal arch or a short haemal spine.
Definition from Arratia 1999.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
A small bone articulating distally with the haemal arch or a short haemal spine.
TAO:wd
true
gular plate
A gular plate is absent in most extant teleosts.
Dermal bone located on the ventral surface of the skull and positioned between the two rami of the lower jaw. Anteriorly the gular attaches to the symphysis of the lower jaw through fibrous connective tissue. The gular is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
median gular
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002089
median gular
Dermal bone located on the ventral surface of the skull and positioned between the two rami of the lower jaw. Anteriorly the gular attaches to the symphysis of the lower jaw through fibrous connective tissue. The gular is an unpaired median bone.
TAO:ga_tg
TAO:wd
pro-otic fossa
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
prootic fossa
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002090
prootic fossa
median caudal cartilage
Cartilage associated with hypurals.
Definition from Johnson and Patterson 1993.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cartilage associated with hypurals.
TAO:wd
rostral cartilage
Median chondrified cartilage bound to premaxillary ascending process by a rostro-premaxilla ligament.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Median chondrified cartilage bound to premaxillary ascending process by a rostro-premaxilla ligament.
TAO:wd
dorsal fin pterygiophore 1
Dorsal fin pterygiophore that is the anteriormost pterygiophore of the dorsal fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dorsal fin pterygiophore that is the anteriormost pterygiophore of the dorsal fin.
TAO:wd
third posttemporal fossa
Present in some characiforms.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
bony plate series
Anatomical cluster that consists of more than one bony plate in an individual.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
armor plate series
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002096
armor plate series
Anatomical cluster that consists of more than one bony plate in an individual.
TAO:wd
sensory canal pore series
Anatomical cluster that consists of more than one sensory canal pore.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that consists of more than one sensory canal pore.
TAO:wd
hemal spine series
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lateral line scale series
Anatomical cluster that consists of more than one lateral line scale.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Anatomical cluster that consists of more than one lateral line scale.
TAO:wd
branchiostegal ray series
Anatomical cluster that consists of the branchiostegal rays within an individual.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branchiostegals
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002101
branchiostegals
Anatomical cluster that consists of the branchiostegal rays within an individual.
TAO:wd
epibranchial series
Anatomical cluster that consists of the epibranchial elements within an individual.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
epibranchials
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002102
epibranchials
Anatomical cluster that consists of the epibranchial elements within an individual.
TAO:wd
true
ceratobranchial series
Anatomical cluster that consists of the ceratobranchial elements within an individual.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Anatomical cluster that consists of the ceratobranchial elements within an individual.
TAO:wd
electrosensory lateral line lobe
Anatomical structure located in the hindbrain that receives primary electroreceptor input.
Definition reference: McNamara, AM., JP Denizot, CD Hopkins. 2005. Comparative Anatomy of the Electrosensory Lateral Line Lobe of Mormyrids: The Mystery of the Missing Map in the Genus Stomatorhinus (Family: Mormyridae). Brain, Behavior and Evolution 65:188-201.
ELL
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ELL
TAO:0002105
Anatomical structure located in the hindbrain that receives primary electroreceptor input.
TAO:wd
true
eminentia granularis
Anatomical structure that is a subdivision of the cerebellum; it is the location of some lateral line nerve synapses.
Definition based on Albert,2001 [Albert JS. 2001. Species Diversity and Phylogenetic systematics of American Knifefishes (Gymnotiformes, Teleostei). Miscellaneous Publications, Museum of Zoology, University of Michigan no. 190:140 pages.]
EG
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical structure that is a subdivision of the cerebellum; it is the location of some lateral line nerve synapses.
TAO:wd
EG
TAO:0002106
medullary command nucleus
Anatomical structure that consists of two neuron types: pacemaker cells and relay cells. The medullary command nucleus commands the timing of the electric organ discharge.
Definition reference: Moortgat, KT, Bullock, TH, and Sejnowski TJ. 2000. J Neurophysiol 83: 971-983. Precision of the Pacemaker Nucleus in a Weakly Electric Fish: Network Versus Cellular Influences.
MCN
medullary pacemaker nucleus
pacemaker nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002107
pacemaker nucleus
Anatomical structure that consists of two neuron types: pacemaker cells and relay cells. The medullary command nucleus commands the timing of the electric organ discharge.
TAO:wd
MCN
TAO:0002107
TAO:0002107
medullary pacemaker nucleus
buccal papilla
Papilla that is part of the mouth.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Papilla that is part of the mouth.
TAO:wd
uroneural 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
metapterygoid-quadrate fenestra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
prootic bulla
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
preural 3 vertebra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
preural centrum 3
pu3
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002112
pu3
TAO:0002112
preural centrum 3
cotylephore
Definition reference: James Wetzel, John P. Wourms and John Friel 1997.
Comparative morphology of cotylephores in Platystacus and Solenostomus:
modifications of the integument for egg attachment in skin-brooding fishes.
Environmental Biology of Fishes. Volume 50, Number 1 / September, 1997.
Pages 13 - 25.
Multi-tissue structure that is a transient outgrowth of tissue on skin brooding fish that acts as an attachment site for embryos.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cotylephores
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0002114
cotylephores
Multi-tissue structure that is a transient outgrowth of tissue on skin brooding fish that acts as an attachment site for embryos.
TAO:wd
uroneural 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epibranchial organ
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
ovipositor
Organ that functions in egg deposition.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Organ that functions in egg deposition.
TAO:wd
true
scale radius
Erosion channel that radiates out from the growth center (focus) of the scale across and through the circuli.
radii
teleost_anatomy_curators
uberon/phenoscape-anatomy
Erosion channel that radiates out from the growth center (focus) of the scale across and through the circuli.
ISBN-10:0226870138
TAO:0002118
radii
dermal scale focus
A demarcation on the scale signfiyning the initial growth point. Requires further classification see Lagler 1947.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
orbitosphenoid septum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
pouch scale
Definition reference:
Weitzman SH, Menezes NA. 1998. Relationships of the tribes and genera of
the Glandulocaudiinae (Ostariophysi: Characiformes: Characidae), with a
description of a new genus. In: Malabarba LR, Reis RE, Vari RP, Lucena ZMS,
Lucena CAS, editors. Phylogeny and Classification of Neotropical Fishes.
Porto Alegre: EDIPUCRS. p 171-192.
Scale that forms part of the posterior border of the caudal-fin organ. Pouch scales are usually hypertrophied.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scale that forms part of the posterior border of the caudal-fin organ. Pouch scales are usually hypertrophied.
TAO:wd
neural arch 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
nuptial tubercle
Nuptial tubercles may be keratinized or nonkeratinized. Also may function in territorial defense or stimulation of females in breeding.
Definition reference: Wiley, M. L. and B. B. Collette. 1970. Breeding tubercles and contact organs in fishes: Their occurrence, structure, and significance. Bull Am Mus Nat Hist 143: 143-216.
Surface structure that is a small protuberance on the surface of the body. Nuptial tubercles primarily function to facilitate contact between individuals for breeding.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
breeding tubercle
contact organ
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002124
breeding tubercle
TAO:0002124
contact organ
Surface structure that is a small protuberance on the surface of the body. Nuptial tubercles primarily function to facilitate contact between individuals for breeding.
TAO:wd
caudal-fin organ
Definition reference:
Weitzman SH, Menezes NA. 1998. Relationships of the tribes and genera of
the Glandulocaudiinae (Ostariophysi: Characiformes: Characidae), with a
description of a new genus. In: Malabarba LR, Reis RE, Vari RP, Lucena ZMS,
Lucena CAS, editors. Phylogeny and Classification of Neotropical Fishes.
Porto Alegre: EDIPUCRS. p 171-192.
Organ that consists of a pouch located on the ventral caudal-fin lobe, opening posteriorly, and composed of glandular tissue. The caudal-fin organ presumably functions to secrete pheromones during courtship.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin organ
caudal organ
caudal sac
glandular organ
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002125
glandular organ
TAO:0002125
caudal sac
TAO:0002125
caudal organ
TAO:0002125
caudal fin organ
Organ that consists of a pouch located on the ventral caudal-fin lobe, opening posteriorly, and composed of glandular tissue. The caudal-fin organ presumably functions to secrete pheromones during courtship.
TAO:wd
caudal-fin ray pump
Anatomical cluster that consists of thickened caudal-fin rays modified into a pumping mechanism associated with the caudal-fin organ.
Caudal fin rays can vary in thickness and form of the pump can vary from a simple open groove to complex chambered structure.
Definition reference:
Weitzman SH, Menezes NA. 1998. Relationships of the tribes and genera of
the Glandulocaudiinae (Ostariophysi: Characiformes: Characidae), with a
description of a new genus. In: Malabarba LR, Reis RE, Vari RP, Lucena ZMS,
Lucena CAS, editors. Phylogeny and Classification of Neotropical Fishes.
Porto Alegre: EDIPUCRS. p 171-192.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that consists of thickened caudal-fin rays modified into a pumping mechanism associated with the caudal-fin organ.
TAO:wd
myorhabdoid bone
Definition reference:
Patterson, C., Johnson, G.D. 1995. The intermuscular bones and ligaments of teleostean fishes. Smithosonian Contributions to Zoology 559:1-85.
Intermuscular bone that is located in the dorsal and ventral forward flexures of the myoseptum.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
myorhabdoi
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002127
myorhabdoi
Intermuscular bone that is located in the dorsal and ventral forward flexures of the myoseptum.
TAO:wd
cavum sinus imparis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cavum sinus impar
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002128
cavum sinus impar
caudal rod
Definition reference: Albert, JS and WL Fink. 2007. PHYLOGENETIC
RELATIONSHIPS OF FOSSIL NEOTROPICAL ELECTRIC FISHES
(OSTEICHTHYES: GYMNOTIFORMES) FROM THE UPPER MIOCENE OF BOLIVIA . Journal
of Vertebrate Paleontology 27(1):17-25
Multi-tissue structure that is a cartilaginous or collagenous bar supporting the caudal appendage.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypural-opisthural rod
teleost_anatomy_curators
uberon/phenoscape-anatomy
Multi-tissue structure that is a cartilaginous or collagenous bar supporting the caudal appendage.
TAO:wd
TAO:0002129
hypural-opisthural rod
true
caudal appendage
Comments: This is a gymnotiform structure. The caudal appendage can include vertebrae, a cartilginous rod, pterygiophores, anal-fin rays, and intermuscular bones.
Definition reference: Albert, JS and WL Fink. 2007. PHYLOGENETIC RELATIONSHIPS OF FOSSIL NEOTROPICAL ELECTRIC FISHES (OSTEICHTHYES: GYMNOTIFORMES) FROM THE UPPER MIOCENE OF BOLIVIA. Journal of Vertebrate Paleontology 27(1):17-25.
Multi-tissue structure that is region of the body posterior to the last anal-fin ray.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal filament
teleost_anatomy_curators
uberon/phenoscape-anatomy
Multi-tissue structure that is region of the body posterior to the last anal-fin ray.
TAO:wd
true
TAO:0002130
caudal filament
obsolete horizontal septum
Anatomical structure that consists of a sheet of connective tissue attached to the vertebral column and dividing the epaxial and hypaxial musculature.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Anatomical structure that consists of a sheet of connective tissue attached to the vertebral column and dividing the epaxial and hypaxial musculature.
TAO:wd
hypural 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal organ
Dorsal organ is a structure found in apteronotid gymnotiform fishes. Definition reference:
Albert, JS and WL Fink. 2007. Phylogenetic relationships of fossil neotropical electric fish (Osteichthyes: Gymnotiformes) from the Upper Miocene of Bolivia. Journal of Vertebrate Paleontology 27:17-25.
Surface structure that is a midsaggital strap of flattened ectodermal tissue extending along the posterodorsal midline.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Surface structure that is a midsaggital strap of flattened ectodermal tissue extending along the posterodorsal midline.
TAO:wd
annular ligament
Ligament that is in the eye and is located at the angle between the cornea and the iris.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ligament that is in the eye and is located at the angle between the cornea and the iris.
ZFA:curator
anterior catecholaminergic tract
CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract.
ZFIN:ZDB-PUB-091221-28
anterior swim bladder bud
Portion of tissue that forms from the swim bladder epithelium at the anterior end of the swim bladder.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of tissue that forms from the swim bladder epithelium at the anterior end of the swim bladder.
ZFIN:090511-18
arrector muscle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vertebral element 9
9
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 8.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:curator
Vertebra that is posteriorly adjacent to vertebra 8.
vertebral element 10
10
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 9.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:curator
Vertebra that is posteriorly adjacent to vertebra 9.
vertebral element 11
11
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 10.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 10.
vertebral element 12
12
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib.
opercular cavity
Anatomical space which is located beneath the operculum and external to the gills.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical space which is located beneath the operculum and external to the gills.
ZFIN:curator
obsolete palatine
Compound endochdondral and dermal bone that results from the fusion of the dermal dermopalatine and the endochondral autopalatine and forms the antero-lateral region of the palate. Commonly, it articulates with the maxilla antero-laterally and with the ethmoidal region medially. The palatine is paired.
Depending on the teleostean group, the palatine may articulate with the entopterygoid posteriorly. The term palatine is usually used for the more advanced teleosts with a large autopalatine and a small dermopalatine represented by a few teeth.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Compound endochdondral and dermal bone that results from the fusion of the dermal dermopalatine and the endochondral autopalatine and forms the antero-lateral region of the palate. Commonly, it articulates with the maxilla antero-laterally and with the ethmoidal region medially. The palatine is paired.
TAO:GA_TG
caudal basal fulcrum
Basal fulcrum that precedes a caudal fin lobe. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
Caudal basal fulcra precede the bases of both lobes of the caudal fin or only the dorsal one in basal teleosts. Most teleosts lack basal fulcra on the caudal fin. For additional information on basal fulcra see Arratia (2008, 2009).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal basal fulcra
teleost_anatomy_curators
uberon/phenoscape-anatomy
Basal fulcrum that precedes a caudal fin lobe. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
PSPUB:0000171
TAO:GA_TG
true
TAO:0002159
caudal basal fulcra
ural centrum 3
A vertebral centrum that is located immediately posterior to ural centrum 2 (polyural terminology). Ural centrum 3 articulates with hypural 3 ventrally. Ural centrum 3 is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ural centrum 3 lacks a neural arch in teleosts.
teleost_anatomy_curators
uberon/phenoscape-anatomy
A vertebral centrum that is located immediately posterior to ural centrum 2 (polyural terminology). Ural centrum 3 articulates with hypural 3 ventrally. Ural centrum 3 is an unpaired median bone.
TAO:GA_TG
ural centrum 4
A vertebral centrum that is located immediately posterior to ural centrum 3 (polyural terminology) and may fuse to ural centrum 3 early in ontogeny. Ural centrum 4 articulates with hypural 4 ventrally. Ural centrum 4 is an unpaired median bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ural centrum 4 lacks a neural arch in teleosts.
teleost_anatomy_curators
uberon/phenoscape-anatomy
A vertebral centrum that is located immediately posterior to ural centrum 3 (polyural terminology) and may fuse to ural centrum 3 early in ontogeny. Ural centrum 4 articulates with hypural 4 ventrally. Ural centrum 4 is an unpaired median bone.
TAO:GA_TG
ural vertebra
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebra that is incomplete or rudimentary and may bear a rudimentary neural arch and sometimes a rudimentary spine or the neural arch and spine are completely absent. Ural vertebrae are one of the last bony elements of the vertebral column, usually smaller than the preural centra. Ural vertebrae are numbered beginning from anterior (1) to posterior (2, 3, 4, etc.). Ural vertebra is an unpaired median bone.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:GA_TG
Vertebra that is incomplete or rudimentary and may bear a rudimentary neural arch and sometimes a rudimentary spine or the neural arch and spine are completely absent. Ural vertebrae are one of the last bony elements of the vertebral column, usually smaller than the preural centra. Ural vertebrae are numbered beginning from anterior (1) to posterior (2, 3, 4, etc.). Ural vertebra is an unpaired median bone.
true
ural vertebra 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ural vertebra that is located directly posterior to preural centrum 1. It may bear a rudimentary neural arch and sometimes a rudimentary spine or the neural arch and spine are completely absent and it may articulate or fuse with hypural 1 (polyural terminology). Ural vertebra 1 is an unpaired median bone.
Ural vertebrae 1 may be defined also as the first ural vertebrae bearing hypurals 1 and 2 (diural terminology).
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:GA_TG
Ural vertebra that is located directly posterior to preural centrum 1. It may bear a rudimentary neural arch and sometimes a rudimentary spine or the neural arch and spine are completely absent and it may articulate or fuse with hypural 1 (polyural terminology). Ural vertebra 1 is an unpaired median bone.
caudal principal ray set
Anatomical cluster including all segmented-and-branched rays plus one unbranched but segmented ray located at the leading margin in each lobe of the caudal fin (Hubbs and Lagler, 1947) and that associates with endoskeletal elements such as hypurals and hemal spines of preural centra 1 and 2 (Arratia, 2008). Caudal principal rays are counted from the dorsalmost one ventrally. Caudal principal rays are unpaired median bones.
In basal teleosts the number of caudal principal rays is about 20. A decreasing of the number of the branched-and segmented rays is observed in more advanced teleosts (see Schultze and Arratia, 1989; Arratia, 1991, 2008). The presence of marginal principal caudal rays as long or longer than the branched-and-segmented principal rays is a synapomorphy of teleosts (Arratia, 2008, 2009).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
branched caudal rays
caudal principal lepidotrichia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002164
branched caudal rays
TAO:0002164
caudal principal lepidotrichia
Anatomical cluster including all segmented-and-branched rays plus one unbranched but segmented ray located at the leading margin in each lobe of the caudal fin (Hubbs and Lagler, 1947) and that associates with endoskeletal elements such as hypurals and hemal spines of preural centra 1 and 2 (Arratia, 2008). Caudal principal rays are counted from the dorsalmost one ventrally. Caudal principal rays are unpaired median bones.
TAO:GA_TG
caudal procurrent ray set
An anatomical cluster of short rays, shorter than the principal ones, which form the anterior dorsal and ventral series of lepidotrichia of the caudal fin that may be associated with neural spines, epurals and uroneurals (dorsal series) and haemal spines of preural vertebrae (ventral series) (Arratia, 2008). The anteriormost procurrent rays are commonly unsegmented, but the posteriormost ones are usually segmented. The procurrent rays are numbered from caudal to rostral direction. The caudal procurrent ray series is an unpaired median series.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal precurrent rays
caudal spiny rays
rudimentary rays
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002165
caudal spiny rays
TAO:0002165
rudimentary rays
TAO:0002165
caudal precurrent rays
An anatomical cluster of short rays, shorter than the principal ones, which form the anterior dorsal and ventral series of lepidotrichia of the caudal fin that may be associated with neural spines, epurals and uroneurals (dorsal series) and haemal spines of preural vertebrae (ventral series) (Arratia, 2008). The anteriormost procurrent rays are commonly unsegmented, but the posteriormost ones are usually segmented. The procurrent rays are numbered from caudal to rostral direction. The caudal procurrent ray series is an unpaired median series.
TAO:Arratia_2008
TAO:GA_TG
pseudourostyle
An elongate lateral process ventrally placed to the proximal region of the pleurostyle. The pseudourostyle is paired.
The pseudourostyle occurs only in certain teleost subgroups. It may be well developed in certain characiforms.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
An elongate lateral process ventrally placed to the proximal region of the pleurostyle. The pseudourostyle is paired.
TAO:GA_TG
true
true
stegural
It is unclear if the structure named stegural is homologous among teleost subgroups.
Modified neural arch, probably of ural centrum 4, formed by a bony base that may extend along the dorso-lateral surfaces of ural centra and preural centra 1 or 2 and by a well-developed antero-dorsal membranous projection that extends lateral to the base of epural(s) and anterior toward the neural arches and/or spines of preural centra 1 or 2 (Arratia and Schultze, 1992). The stegural is a paired bone.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2002081
teleost_anatomy_curators
uberon/phenoscape-anatomy
uroneural
TAO:0002167
uroneural
Modified neural arch, probably of ural centrum 4, formed by a bony base that may extend along the dorso-lateral surfaces of ural centra and preural centra 1 or 2 and by a well-developed antero-dorsal membranous projection that extends lateral to the base of epural(s) and anterior toward the neural arches and/or spines of preural centra 1 or 2 (Arratia and Schultze, 1992). The stegural is a paired bone.
TAO:GA_TG
preural centrum 1 + ural centrum 1 + ural centrum 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Urostyle that is the result of fusion of preural centrum 1 with ural centra 1 and 2.
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:wd
Urostyle that is the result of fusion of preural centrum 1 with ural centra 1 and 2.
branchial mesenchyme
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
octaval nerve motor nucleus
Hindbrain nucleus which consists of cell bodies whose axons exit the hindbrain via cranial nerve VIII and innervate hair cells of the lateral line and inner ear. The neurons of these nuclei are unusual in that they extend both contra- and ipsilateral dendrites.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Hindbrain nucleus which consists of cell bodies whose axons exit the hindbrain via cranial nerve VIII and innervate hair cells of the lateral line and inner ear. The neurons of these nuclei are unusual in that they extend both contra- and ipsilateral dendrites.
PMID:17182783
rostral octaval nerve motor nucleus
ROLE
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral cranial nerve VIII motor nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002175
rostral cranial nerve VIII motor nucleus
ROLE
TAO:0002175
caudal octaval nerve motor nucleus
teleost_anatomy_curators
uberon/phenoscape-anatomy
peripheral nucleus of ventral telencephalon
Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ISBN:3764351209
Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain.
ZFIN:curator
central nucleus of ventral telencephalon
Peripheral nucleus of the ventral telencephalon which is located immediately lateral to the dorsal nucleus of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
area ventralis telencephali, nucleus centralis
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002180
area ventralis telencephali, nucleus centralis
ISBN:3764351209
Peripheral nucleus of the ventral telencephalon which is located immediately lateral to the dorsal nucleus of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain.
ZFIN:curator
climbing fiber
Portion of tissue that consists of afferent axons from the inferior olive and synapsing with Purkinje cells within the molecular layer of the valvula cerebelli and corpus cerebelli.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ISBN:3764351209
Portion of tissue that consists of afferent axons from the inferior olive and synapsing with Purkinje cells within the molecular layer of the valvula cerebelli and corpus cerebelli.
ZFIN:ZDB-PUB-090422-9
true
true
dorsolateral motor nucleus of vagal nerve
Motor nucleus of vagal nerve that is located within the dorsolateral portion of rhomobomere 8.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dlX
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002192
dlX
Motor nucleus of vagal nerve that is located within the dorsolateral portion of rhomobomere 8.
ZFIN:ZDB-PUB-090417-11
dorsolateral septum
Portion of tissue that grows in from the dorsolateral wall of the otic vesicle, forming a dorsolateral partition between the developing anterior and posterior semicircular canals.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal bar
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of tissue that grows in from the dorsolateral wall of the otic vesicle, forming a dorsolateral partition between the developing anterior and posterior semicircular canals.
ZFIN:ZDB-PUB-961014-383
TAO:0002193
dorsal bar
true
true
epidermal placode
Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium.
ZFIN:ZDB-PUB-081008-12
true
obsolete head muscle
Muscle which is part of the head.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cephalic muscle
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Muscle which is part of the head.
ZFIN:curator
TAO:0002198
cephalic muscle
hindbrain commissure
CNS white matter that crosses the midline within the hindbrain.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
CNS white matter that crosses the midline within the hindbrain.
ZFIN:ZDB-PUB-090417-11
hypobranchial muscle
Head muscle that originates on the anterior region of the cleithrum and inserts on the urohyal. The hypobranchial forms initially as left and right parts that later fuse together forming a cone shape.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sternohyoideus
teleost_anatomy_curators
uberon/phenoscape-anatomy
Head muscle that originates on the anterior region of the cleithrum and inserts on the urohyal. The hypobranchial forms initially as left and right parts that later fuse together forming a cone shape.
ZFIN:ZDB-PUB-080306-33
TAO:0002200
sternohyoideus
intermediate nucleus
Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells.
ZFIN:ZDB-PUB-001220-2
immature Schwann cell
Range covers Schwann cell precursor and immature Schwann cell, should be split and put into CL.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lateral nucleus of ventral telencephalon
Peripheral nucleus of the ventral telencephalon that has migrated to the periphery of the brain. From Neuroanatomy of the Zebrafish Brain.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
area ventralis telencephali, nucleus lateralis
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002204
area ventralis telencephali, nucleus lateralis
ISBN:3764351209
Peripheral nucleus of the ventral telencephalon that has migrated to the periphery of the brain. From Neuroanatomy of the Zebrafish Brain.
ZFIN:curator
macula communis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
medial motor nucleus of vagal nerve
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mmX
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002207
mmX
mesonephric podocyte
Podocyte that is part of the kidney (mesonephros).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Podocyte that is part of the kidney (mesonephros).
ZFIN:curator
mossy fiber
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete optic nerve head
Portion of cranial nerve II where large fasicles of axons from the optic fiber layer come together prior to leaving the eye.
optic nerve heads
removed axiom: part_of some 'cranial nerve II'
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0002213
optic nerve heads
Portion of cranial nerve II where large fasicles of axons from the optic fiber layer come together prior to leaving the eye.
ZFIN:curator
os suspensorium medial flange
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
otic vesicle protrusion
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
otic vesicle ventral protrusion
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
parasphenoid-pterosphenoid joint
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
parallel fiber
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
parallel fibers
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0002218
parallel fibers
true
parvocellular preoptic nucleus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pericardial muscle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
periventricular nucleus of ventral telencephalon
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pillar of the semicircular canal
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
pleuroperitoneal cavity
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior pronephric duct
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior pronephric ducts
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0002225
posterior pronephric ducts
true
preglomerular nucleus
Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain.
ZFIN:curator
presumptive atrium primitive heart tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
presumptive cardiac ventricle primitive heart tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
presumptive ventral mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pronephric podocyte
Podocyte that is part of the pronephros.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Podocyte that is part of the pronephros.
ZFIN:curator
Purkinje cell layer corpus cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Purkinje cell layer valvula cerebelli
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
scale primordium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
supraoptic tract
SOT
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
SOT
TAO:0002244
true
supratemporal commissure
Lateral line canal that that crosses the supratemporal region posterior to the openings of the endolymphatic ducts and connects the lateral canals of each side.
Not clear what the taxon constraints are here. The cited reference discusses two species of dogfish.
teleost_anatomy_curators
uberon/phenoscape-anatomy
DOI: 10.1002/cne.900280102
Lateral line canal that that crosses the supratemporal region posterior to the openings of the endolymphatic ducts and connects the lateral canals of each side.
ctenius
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ctenii
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0002249
ctenii
true
true
epural 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epural 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epural 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
obsolete pyloric caecum
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pyloric appendage
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0002253
pyloric appendage
ocular side
Organism subdivision that is the side of the body possessing eyes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
eyed side
teleost_anatomy_curators
uberon/phenoscape-anatomy
Organism subdivision that is the side of the body possessing eyes.
TAO:wd
TAO:0002255
eyed side
blind side
Organism subdivision that is the side of the body lacking eyes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Organism subdivision that is the side of the body lacking eyes.
TAO:wd
premaxilla dentigerous process
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
premaxilla alveolar process
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002257
premaxilla alveolar process
true
true
true
trituration tooth
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
premaxillary-maxillary joint
Joint that articulates the premaxilla and maxilla. Premaxillary-maxillary joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the premaxilla and maxilla. Premaxillary-maxillary joint is paired.
TAO:wd
true
dorsal fin spine
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
anal fin spine
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epineural 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
interarcual cartilage
An interarcual cartilage is present in percomorph fishes (Johnson and Patterson 1993).
IAC
Pharyngeal arch cartilage located between uncinate process of epibranchial 1 and pharyngobranchial 2.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
IAC
TAO:0002269
Pharyngeal arch cartilage located between uncinate process of epibranchial 1 and pharyngobranchial 2.
TAO:wd
pelvic fin spine
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pelvic spine
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002270
pelvic spine
ventral caudal procurrent ray 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral caudal procurrent ray 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ctenoid scale
Scale that possesses cteni (discrete spines).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scale that possesses cteni (discrete spines).
TAO:wd
transforming ctenoid scale
Ctenoid scale with two or three alternating rows of cteni marginally and truncated cteni submarginally. (Roberts 1993).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ctenoid scale with two or three alternating rows of cteni marginally and truncated cteni submarginally. (Roberts 1993).
TAO:wd
Jakubowski's organ
Anatomical cluster that includes the terminal supraorbital neuromast(s) contained in the nasal bone and innervated by the buccal nerve, contact between the nasal bone and lacrimal, and contact between the supraorbital and infraorbital canals. (Johnson and Patterson 1993).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Anatomical cluster that includes the terminal supraorbital neuromast(s) contained in the nasal bone and innervated by the buccal nerve, contact between the nasal bone and lacrimal, and contact between the supraorbital and infraorbital canals. (Johnson and Patterson 1993).
TAO:wd
obsolete median fin
Fin that is an unpaired fin located in the sagittal plane of the organism.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
VSAO:0000162
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
nageoire impaire
périssoptérygie
Fin that is an unpaired fin located in the sagittal plane of the organism.
TAO:wd
PSPUB:0000164
nageoire impaire
PSPUB:0000140
périssoptérygie
pectoral fin distal radial 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pectoral fin distal radial 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pectoral fin distal radial 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
retractor posttemporalis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
preopercle-opercle joint
Joint that articulates the preopercle and opercle. Preopercle-opercle joint is paired.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Joint that articulates the preopercle and opercle. Preopercle-opercle joint is paired.
TAO:wd
melanophore spot
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
spot
spots
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002283
spot
TAO:0002283
spots
body marking
Surface structure that is a visible mark on the body resulting from pigmentation.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
markings
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002284
markings
Surface structure that is a visible mark on the body resulting from pigmentation.
TAO:wd
cycloid scale
Scale that is smooth-edged, round or oval and composed of acellular dermal bone lacking small spines on the posterior exposed edge. (from http://www.briancoad.com/Dictionary/introduction.htm).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Typical of many teleosts. Some cycloid scales may have a serrated margin and are then termed spinoid scales. (from http://www.briancoad.com/Dictionary/introduction.htm).
teleost_anatomy_curators
uberon/phenoscape-anatomy
Scale that is smooth-edged, round or oval and composed of acellular dermal bone lacking small spines on the posterior exposed edge. (from http://www.briancoad.com/Dictionary/introduction.htm).
TAO:wd
obsolete aqueous humor
Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells.
ZFIN:ZDB-PUB-050701-15
obsolete sclera
Multi-tissue structure that composes the opaque fibrous outer layer of the eye.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Multi-tissue structure that composes the opaque fibrous outer layer of the eye.
ZFIN:ZDB-PUB-050701-15
obsolete vitreous
Portion of organism substance that is a gelatinous extracellular matrix structure that fills the vitreous cavity of the eye.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
PMID:18344966
Portion of organism substance that is a gelatinous extracellular matrix structure that fills the vitreous cavity of the eye.
fulcrum
Dermal bone that is typically associated with a fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Dermal bone that is typically associated with a fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
PSPUB:0000171
TAO:wd
epaxial basal fulcrum
Basal fulcrum that is positioned at the dorsal or anterodorsal margin of the caudal fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal basal fulcra
dorsal basal fulcrum
epaxial basal fulcra
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0002292
epaxial basal fulcra
TAO:0002292
dorsal basal fulcrum
Basal fulcrum that is positioned at the dorsal or anterodorsal margin of the caudal fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
PSPUB:0000171
TAO:wd
TAO:0002292
dorsal basal fulcra
hypaxial basal fulcrum
Basal fulcrum that is positioned at the anteroventral margin of the caudal fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hypaxial basal fulcra
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral basal fulcra
ventral basal fulcrum
TAO:0002293
ventral basal fulcrum
TAO:0002293
ventral basal fulcra
Basal fulcrum that is positioned at the anteroventral margin of the caudal fin. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
PSPUB:0000171
TAO:wd
TAO:0002293
hypaxial basal fulcra
fish scute
Dermal bone that is an unpaired, scale-like structure. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ridge scale
teleost_anatomy_curators
temporarily relabeled 'fish scute' to distinguish from reptilian scute class. To DO: reconcile definitions for the two sets of classes.
uberon/phenoscape-anatomy
Dermal bone that is an unpaired, scale-like structure. Arratia, G. 2009. Identifying patterns of diversity of the actinopterygian fulcra. Acta Zoologica (Stockholm) 90 (Suppl. 1): 220-235.
PSPUB:0000171
TAO:wd
TAO:0002294
ridge scale
basal communicating artery
BCA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
BCA
TAO:0005000
true
mid cerebral vein
MCeV
The mesencephalic veins (MsV) enter the mid cerebral veins (MCeV) at the dorsal midline. THe MCeVs originate at the dorsal midline, proceede lateraly in a ventral direction to drain into the paired primordial midbrain channels (PHBC). ogai et al. 2001., Kimmel et al. 1993
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mid-cerebral vein
middle cerebral vein
teleost_anatomy_curators
uberon/phenoscape-anatomy
MCeV
TAO:0005010
The mesencephalic veins (MsV) enter the mid cerebral veins (MCeV) at the dorsal midline. THe MCeVs originate at the dorsal midline, proceede lateraly in a ventral direction to drain into the paired primordial midbrain channels (PHBC). ogai et al. 2001., Kimmel et al. 1993
ZFIN:curator
TAO:0005010
mid-cerebral vein
TAO:0005010
middle cerebral vein
true
true
pseudobranchial artery
A vascular loop attached to the efferent part of the mandibular arch that forms at 3.5 dpf. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
A vascular loop attached to the efferent part of the mandibular arch that forms at 3.5 dpf. Isogai et al. 2001.
ZFIN:curator
afferent filamental artery
AFA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
afferent filamental arteries
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0005012
afferent filamental arteries
AFA
TAO:0005012
true
true
concurrent branch afferent branchial artery
CCB
The branch of the afferent branchial artery that continues posteriodorsally. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
CCB
TAO:0005013
true
The branch of the afferent branchial artery that continues posteriodorsally. Isogai et al. 2001.
ZFIN:curator
true
recurrent branch afferent branchial artery
RCB
The anterioventral proceeding branch of the afferent branchial artery. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
recurrent branch afferent branchial arteries
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
RCB
TAO:0005014
TAO:0005014
recurrent branch afferent branchial arteries
The anterioventral proceeding branch of the afferent branchial artery. Isogai et al. 2001.
ZFIN:curator
true
afferent lamellar arteriole
AFL
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
afferent lamellar arterioles
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005015
afferent lamellar arterioles
AFL
TAO:0005015
true
true
true
primordial midbrain channel
PMBC
The vessel between the anterior cerebral vein and the mid cerebral vein. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
PMBC
TAO:0005017
true
The vessel between the anterior cerebral vein and the mid cerebral vein. Isogai et al. 2001.
ZFIN:curator
true
efferent filamental artery
EFA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
EFA
TAO:0005018
true
efferent lamellar arteriole
ELA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
efferent lamellar arterioles
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
TAO:0005019
efferent lamellar arterioles
ELA
TAO:0005019
central artery
Arteries that irrigate the forebrain and midbrain Isogai et al. 2001.
CtA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
CtA
TAO:0005020
Arteries that irrigate the forebrain and midbrain Isogai et al. 2001.
ZFIN:curator
cerebellar central artery
CCtA
Extend upward from the PCS, branch to provide an arterial feed to the hindbrain, then drain back down into the PHBC Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Extend upward from the PCS, branch to provide an arterial feed to the hindbrain, then drain back down into the PHBC Isogai et al. 2001.
ZFIN:curator
CCtA
TAO:0005021
opercular artery
ORA
The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
external carotid artery
teleost_anatomy_curators
uberon/phenoscape-anatomy
The opercular artery arises from the hyoid stump on the first aortic arch, then follows the lateral margin of the operculum (gill covering) ventrally to reconnect into the proximal part of the first aortic arch. Isogai et al. 2001.
ZFIN:curator
ORA
TAO:0005022
TAO:0005022
external carotid artery
true
true
dorsal longitudinal anastomotic vessel
DLAV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Trunk vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
DLAV
TAO:0005025
true
Trunk vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001.
ZFIN:curator
primary head sinus
Main route for venous drainage of the anterior and mid cerebral veins as well as portions of the primordial hindbrain channel. Isogai et al. 2001.
PHS
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral head vein
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
PHS
TAO:0005026
true
TAO:0005026
lateral head vein
Main route for venous drainage of the anterior and mid cerebral veins as well as portions of the primordial hindbrain channel. Isogai et al. 2001.
ZFIN:curator
posterior cerebral vein
PCeV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vein that drains the dorsal longitudinal vessel and the caudal portions of the venous capillary network of the medulla oblongata. Isogai et al. 2001.
caudal cerebral vein
teleost_anatomy_curators
uberon/phenoscape-anatomy
PCeV
TAO:0005027
true
true
TAO:0005027
caudal cerebral vein
Vein that drains the dorsal longitudinal vessel and the caudal portions of the venous capillary network of the medulla oblongata. Isogai et al. 2001.
ZFIN:curator
rostral blood island
Hematopoietic tissue derived from the cephalic mesoderm. Predominantly produces myeloid cells. de Jong and Zon 2005.
RBI
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Hematopoietic tissue derived from the cephalic mesoderm. Predominantly produces myeloid cells. de Jong and Zon 2005.
ZFIN:curator
RBI
TAO:0005029
dorsal ciliary vein
DCV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
DCV
TAO:0005030
true
dorsal longitudinal vein
DLV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Vessel that connects to the primitive hindbrain channel and the basilar artery at the caudal end of the medulla oblongata. Isogai et al. 2001.
ZFIN:curator
DLV
TAO:0005031
true
optic vein
OV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vein that connects to the hyaloid vein that drains the eye. External to eye. Isogai et al. 2001.
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
OV
TAO:0005032
Vein that connects to the hyaloid vein that drains the eye. External to eye. Isogai et al. 2001.
ZFIN:curator
parachordal vessel
PAV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vessels run longitudinally along the horizontal myoseptum. These vessels are not functional until after lumenization which occurs near 4 dpf. Isogai et al. 2003.
teleost_anatomy_curators
uberon/phenoscape-anatomy
Vessels run longitudinally along the horizontal myoseptum. These vessels are not functional until after lumenization which occurs near 4 dpf. Isogai et al. 2003.
ZFIN:curator
true
true
true
PAV
TAO:0005034
true
supraintestinal artery
A continuation of the anterior mesenteric artery, which branches out from the dorsal aorta just caudal to the pronephric glomus. Isogai et al. 2001.
SIA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
A continuation of the anterior mesenteric artery, which branches out from the dorsal aorta just caudal to the pronephric glomus. Isogai et al. 2001.
ZFIN:curator
SIA
TAO:0005036
supraintestinal vein
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
anterior lateral mesoderm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete posterior lateral mesoderm
PLM
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
PLM
TAO:0005040
optic artery
The artery that carries blood to the eye. It branches from the internal carotid artery and enters the eye ventrally through the optic fissure. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
The artery that carries blood to the eye. It branches from the internal carotid artery and enters the eye ventrally through the optic fissure. Isogai et al. 2001.
ZFIN:curator
primitive prosencephalic artery
PPrA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vessel that branches from cranial division of the internal carotid artery, extending laterally around the rostral end of the head. Isogai et al. 2001.
teleost_anatomy_curators
uberon/phenoscape-anatomy
PPrA
TAO:0005048
Vessel that branches from cranial division of the internal carotid artery, extending laterally around the rostral end of the head. Isogai et al. 2001.
ZFIN:curator
prosencephalic artery
After the primitive prosencephalic artery forms it becomes disconnected from the cranial division of the internal carotid artery and instead it connects to the anterior mesencephalic central artery and the communicating vessels of the palatocerebral artery.
PrA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
After the primitive prosencephalic artery forms it becomes disconnected from the cranial division of the internal carotid artery and instead it connects to the anterior mesencephalic central artery and the communicating vessels of the palatocerebral artery.
ZFIN:curator
PrA
TAO:0005049
palatocerebral artery
PLA
The PLA branches ventrally from the CrDI. It extends rostrally along the base of mid- and forebrain, then loops medially and links to the corresponding vessel from the other side of the embryo. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
PLA
TAO:0005050
The PLA branches ventrally from the CrDI. It extends rostrally along the base of mid- and forebrain, then loops medially and links to the corresponding vessel from the other side of the embryo. Isogai et al. 2001.
ZFIN:curator
communicating vessel palatocerebral artery
CMV
Connect the palatocerebral artery with the prosencephalic artery. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
communicating vessels
teleost_anatomy_curators
uberon/phenoscape-anatomy
Connect the palatocerebral artery with the prosencephalic artery. Isogai et al. 2001.
ZFIN:curator
TAO:0005051
communicating vessels
CMV
TAO:0005051
anterior mesencephalic central artery
AMCtA
Arteries that irrigate rostral regions of the midbrain. They extend between the Basial communicating artery to the anterior cerebral vein. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral mesencephalic central artery
teleost_anatomy_curators
uberon/phenoscape-anatomy
AMCtA
TAO:0005052
Arteries that irrigate rostral regions of the midbrain. They extend between the Basial communicating artery to the anterior cerebral vein. Isogai et al. 2001.
ZFIN:curator
TAO:0005052
rostral mesencephalic central artery
nasal ciliary artery
NCA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
NCA
TAO:0005053
inner optic circle
IOC
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
IOC
TAO:0005054
median palatocerebral vein
Drains the PLA loop proceeds straight caudally along the cranial midline just above the pharynx, just below the diencephalon. Forms a 'T' with the palatocerebral veins. Isogai et al. 2001.
MPLV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Drains the PLA loop proceeds straight caudally along the cranial midline just above the pharynx, just below the diencephalon. Forms a 'T' with the palatocerebral veins. Isogai et al. 2001.
ZFIN:curator
true
true
MPLV
TAO:0005055
palatocerebral vein
PLV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vein that drains the median palatocerebral vein into the optic vein. Isogai et al. 2001.
teleost_anatomy_curators
uberon/phenoscape-anatomy
PLV
TAO:0005056
true
true
Vein that drains the median palatocerebral vein into the optic vein. Isogai et al. 2001.
ZFIN:curator
bulbus arteriosus outer layer
Composed of scattered layers of interrupted elastic lamina. Hu et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
bulbus arteriosus externa
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005066
bulbus arteriosus externa
true
Composed of scattered layers of interrupted elastic lamina. Hu et al. 2001.
ZFIN:curator
true
bulbus arteriosus middle layer
Composed of 7-10 layers of helically arranged smooth muscle cells surrounded by a fine network of collagen, reticular, and elastic fibrils. Hu et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
bulbus arteriosus media
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005067
bulbus arteriosus media
true
Composed of 7-10 layers of helically arranged smooth muscle cells surrounded by a fine network of collagen, reticular, and elastic fibrils. Hu et al. 2001.
ZFIN:curator
true
bulbus arteriosus inner layer
Composed of subendothelium with longitudinally oriented collagen, reticular fibrils, elastic fibers, and smooth muscle cells bound by a thin endothelial layer. Hu et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
bulbus arteriosus intima
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0005068
bulbus arteriosus intima
Composed of subendothelium with longitudinally oriented collagen, reticular fibrils, elastic fibers, and smooth muscle cells bound by a thin endothelial layer. Hu et al. 2001.
ZFIN:curator
true
endocardial ring
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
atrioventricular ring
AV ring
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
AV ring
TAO:0005073
central cardiac conduction system
Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods.
ZFIN:curator
peripheral cardiac conduction system
Portion of the cardiac conduction system, with rapid impulse propagation.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the cardiac conduction system, with rapid impulse propagation.
ZFIN:curator
primordial vasculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
middle mesencephalic central artery
MMCtA
Project rostrally and dorsally from the AMCtA to to irrigate the midportion of the midbrain Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
MMCtA
TAO:0005078
Project rostrally and dorsally from the AMCtA to to irrigate the midportion of the midbrain Isogai et al. 2001.
ZFIN:curator
posterior mesencephalic central artery
PMCtA
Project dorsally from BCA to irrigate the caudal part of midbrain Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal mesencephalic central artery
teleost_anatomy_curators
uberon/phenoscape-anatomy
PMCtA
TAO:0005079
TAO:0005079
caudal mesencephalic central artery
Project dorsally from BCA to irrigate the caudal part of midbrain Isogai et al. 2001.
ZFIN:curator
anterior mesenteric artery
AMA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Unpaired artery departing from dorsal aorta, typically supplying the small intestine
rostral mesenteric artery
teleost_anatomy_curators
uberon/phenoscape-anatomy
ISBN10:0073040584
Unpaired artery departing from dorsal aorta, typically supplying the small intestine
AMA
TAO:0005080
TAO:0005080
rostral mesenteric artery
cjm
dorsal branch nasal ciliary artery
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral branch nasal ciliary artery
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
metencephalic artery
These arteies branch dorsally from both sides of the posterior communicating artery looping up to join with the opposite MtA as well as with both middle cerebral veins at the dorsal midline of the head. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
These arteies branch dorsally from both sides of the posterior communicating artery looping up to join with the opposite MtA as well as with both middle cerebral veins at the dorsal midline of the head. Isogai et al. 2001.
ZFIN:curator
nasal artery
NA
The nasal arteries start at the internal carotid artey and travel rostrally, passing along the right and left walls of the nasal sac at the most rostral end of the head. From the nasal sac, the NA flows into the nasal veins. Isogai et al. 2001.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
NA
TAO:0005085
The nasal arteries start at the internal carotid artey and travel rostrally, passing along the right and left walls of the nasal sac at the most rostral end of the head. From the nasal sac, the NA flows into the nasal veins. Isogai et al. 2001.
ZFIN:curator
pectoral vein
PV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
PV
TAO:0005087
posterior mesenteric artery
PMA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Unpaired artery departing from dorsal aorta that typically supplies the large intestine
caudal mesenteric artery
teleost_anatomy_curators
uberon/phenoscape-anatomy
PMA
TAO:0005088
ISBN10:0073040584
Unpaired artery departing from dorsal aorta that typically supplies the large intestine
cjm
TAO:0005088
caudal mesenteric artery
swim bladder artery
An elaborate set of vessels that branche off caudally from the anterior mesenteric artery just after the dorsal aorta. The SBA vascular loops are located on the ventral side of the swim bladder. Isogai et al. 2001.
SBA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
An elaborate set of vessels that branche off caudally from the anterior mesenteric artery just after the dorsal aorta. The SBA vascular loops are located on the ventral side of the swim bladder. Isogai et al. 2001.
ZFIN:curator
SBA
TAO:0005089
nasal vein
NV
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
NV
TAO:0005093
caudal fin vasculature
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
central ray artery
Positioned in the intraray mesenchym between the hemirays of the lepidotrichia,. Huang et al. 2003.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Positioned in the intraray mesenchym between the hemirays of the lepidotrichia,. Huang et al. 2003.
ZFIN:curator
ray vein
Lie flanking and just lateral to the fin ray, in the interray mesenchyme. Huang et al. 2003.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Lie flanking and just lateral to the fin ray, in the interray mesenchyme. Huang et al. 2003.
ZFIN:curator
intervessel commissure
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vessels that travel between artery and veins or vein and vein in a single ray.
intervessel comisures
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005100
intervessel comisures
Vessels that travel between artery and veins or vein and vein in a single ray.
ZFIN:curator
interray vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vessels that travel between veins in adjacent rays.
interray vessels
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005101
interray vessels
Vessels that travel between veins in adjacent rays.
ZFIN:curator
presumptive median fin fold
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
presumptive median fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005102
presumptive median fin-fold
presumptive ventral fin fold
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
presumptive ventral fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005103
presumptive ventral fin-fold
presumptive dorsal fin fold
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
presumptive dorsal fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005104
presumptive dorsal fin-fold
longitudinal lateral lymphatic vessel
LLL
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
LLL
TAO:0005106
middle lateral line system
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
primary posterior lateral line primordium
Primordium that forms the first neuromasts of the posterior lateral line. This primordium travels at 1.5-1.7 somites/hour and deposits neuromast that are polarized along the antero-posterior axis.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
primI
primary posterior lateral line primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
Primordium that forms the first neuromasts of the posterior lateral line. This primordium travels at 1.5-1.7 somites/hour and deposits neuromast that are polarized along the antero-posterior axis.
ZFIN:curator
TAO:0005115
primary posterior lateral line primordia
TAO:0005115
primI
secondary posterior lateral line primordium
Second lateral line primordium. These primordia moves at 0.2 somites/hour and deposite neromasts that are polarized in a dorso-ventral direction.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
secondary posterior lateral line primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005116
secondary posterior lateral line primordia
Second lateral line primordium. These primordia moves at 0.2 somites/hour and deposite neromasts that are polarized in a dorso-ventral direction.
ZFIN:curator
anterior lateral line primordium
A migrating group of cells originating from an anterior lateral line placode. The primordium deposits neuromasts and interneuromasts between them during its migration.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior lateral line primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005117
anterior lateral line primordia
A migrating group of cells originating from an anterior lateral line placode. The primordium deposits neuromasts and interneuromasts between them during its migration.
ZFIN:curator
middle lateral line primordium
A migrating group of cells originating from the middle lateral line placode. The primordium deposits neuromasts with interneuromasts between them.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle lateral line primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
A migrating group of cells originating from the middle lateral line placode. The primordium deposits neuromasts with interneuromasts between them.
ZFIN:curator
TAO:0005118
middle lateral line primordia
barbel primordium
A surface structure that will eventually grow to form a barbel. The primordium is rich in taste buds. The final location for taste buds present in the primordium is the distal tip of the mature barbel.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
barbel primordia
teleost_anatomy_curators
uberon/phenoscape-anatomy
A surface structure that will eventually grow to form a barbel. The primordium is rich in taste buds. The final location for taste buds present in the primordium is the distal tip of the mature barbel.
ZFIN:curator
TAO:0005119
barbel primordia
middle lateral line placode
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal axial hypoblast
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
intestinal bulb epithelium
Intestinal epithelium which lines the lumen of the intestinal bulb.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Intestinal epithelium which lines the lumen of the intestinal bulb.
ZFIN:curator
primary dental epithelium
Epithelium that surrounds a primary tooth. This epithelium is committed to formation of replacement teeth.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pharyngeal tooth epithelium
teleost_anatomy_curators
tooth epithelium
uberon/phenoscape-anatomy
Epithelium that surrounds a primary tooth. This epithelium is committed to formation of replacement teeth.
ZFIN:curator
TAO:0005135
tooth epithelium
TAO:0005135
pharyngeal tooth epithelium
obsolete enameloid
Skeletal tissue that is hypermineralized and aprismatic and deposited by a combination of ameloblasts and odontoblasts that are excluded from the matrix. Enameloid develops from pre-enameloid tissue.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:0011692
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Skeletal tissue that is hypermineralized and aprismatic and deposited by a combination of ameloblasts and odontoblasts that are excluded from the matrix. Enameloid develops from pre-enameloid tissue.
VSAO:curator
ampullary nerve
A branch of the 8th cranial nerve that innervates the cristae ampullaris.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
A branch of the 8th cranial nerve that innervates the cristae ampullaris.
ZFIN:curator
gold iridophore
Iridescent iridophore containing gold reflecting platelets.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Iridescent iridophore containing gold reflecting platelets.
ZFIN:curator
silver iridophore
Iridescent iridophore containing silver reflecting platelets.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Iridescent iridophore containing silver reflecting platelets.
ZFIN:curator
extrahepatic duct
Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct.
ZFIN:curator
ventral liver lobe
3rd lobe
Portion of the liver which develops on the fish's ventral side.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
third lobe
uberon/phenoscape-anatomy
true
TAO:0005174
third lobe
Portion of the liver which develops on the fish's ventral side.
ZFIN:curator
3rd lobe
TAO:0005174
obsolete CoPA
An interneuron in the spinal cord. CoPA are bipolar with "T" shaped dorsal dendrites, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord.
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. incorrectly generalized to teleosts
primary commissural interneuron
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005175
primary commissural interneuron
An interneuron in the spinal cord. CoPA are bipolar with "T" shaped dorsal dendrites, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord.
ZFIN:ZDB-PUB-010807-17
ZFIN:ZDB-PUB-961014-274
ZFIN:ZDB-PUB-961014-649
obsolete CoSA
An interneuron of the spinal cord. CoSA, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord.
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. obsoleting because incorrectly generalized to teleosts.
secondary commissural interneuron
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
An interneuron of the spinal cord. CoSA, have contralateral longitudinal axons that crosses the cord dorsal to the Mauthner neuron and ascends in the dorsal cord.
ZFIN:ZDB-PUB-010807-17
ZFIN:ZDB-PUB-961014-649
TAO:0005176
secondary commissural interneuron
obsoelte VeLD
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. incorrectly generalized to teleosts so being obsoleted.
V2b interneuron
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
ventral longitudinal interneuron
TAO:0005177
V2b interneuron
TAO:0005177
ventral longitudinal interneuron
obsolete DoLA
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL. incorrectly generalized to teleosts so being obsoleted.
dorsal longitudinal interneuron
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005178
dorsal longitudinal interneuron
MiP motor neuron
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
middle primary motoneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005179
middle primary motoneuron
RoP motor neuron
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
rostral primary motoneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005180
rostral primary motoneuron
VaP motor neuron
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
teleost_anatomy_curators
uberon/phenoscape-anatomy
variable primary motoneuron
TAO:0005181
variable primary motoneuron
t-interneuron
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
teleost_anatomy_curators
uberon/phenoscape-anatomy
MiD2i
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL
middle dorsal 2 ipsilateral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005183
middle dorsal 2 ipsilateral interneuron
MiD2cl
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL
middle dorsal 2 contralateral llf interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005184
middle dorsal 2 contralateral llf interneuron
MiD2cm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL
middle dorsal 2 contralateral mlf interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005185
middle dorsal 2 contralateral mlf interneuron
obsolete CoB
A bifurcate interneuron. It is a commissural neuron with both ascending and descending axons in the ventrolateral cord contralateral to its cell body.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
This may be the same as CoBL. incorrectly generalized to teleosts so being obsoleted.
bifurcate commissural interneuron
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005186
bifurcate commissural interneuron
A bifurcate interneuron. It is a commissural neuron with both ascending and descending axons in the ventrolateral cord contralateral to its cell body.
ZFIN:ZDB-PUB-961014-649
MiM1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle medial interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005187
middle medial interneuron
MiR1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle rostral 1 interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005188
middle rostral 1 interneuron
MiR2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle rostral 2 interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005189
middle rostral 2 interneuron
MiV1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle ventral 1 neuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005190
middle ventral 1 neuron
MiV2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
middle ventral 2 neuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005191
middle ventral 2 neuron
RoI2C
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral intermediate 2 caudal interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005192
rostral intermediate 2 caudal interneuron
RoI2R
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral intermediate 2 rostral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005193
rostral intermediate 2 rostral interneuron
RoL1
May have 12 neurons in each hemi rhombomere ZDB-PUB-060217-9
7 neurons in each hemi rhombomere 080227-17 and 931014-770
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral lateral 1 interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005194
rostral lateral 1 interneuron
MiD3cl
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
middle dorsal 3 contralateral llf interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005195
middle dorsal 3 contralateral llf interneuron
MiD3cm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
middle dorsal 3 contralateral mlf interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005196
middle dorsal 3 contralateral mlf interneuron
MiD3i
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This term entered TAO as a leaf node in the zebrafish AO and is not in the CL.
middle dorsal 3 ipsilateral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005197
middle dorsal 3 ipsilateral interneuron
RoL2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral lateral 2 interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005198
rostral lateral 2 interneuron
RoL2r
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral lateral 2 rostral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005199
rostral lateral 2 rostral interneuron
RoL2c
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral lateral 2 caudal interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005200
rostral lateral 2 caudal interneuron
RoL3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral lateral 3 interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005201
rostral lateral 3 interneuron
RoM1c
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral medial 1 caudal interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005202
rostral medial 1 caudal interneuron
RoM1r
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral medial 1 rostral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005203
rostral medial 1 rostral interneuron
rostral ventral 3 interneuron
RoV3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
RoV3
TAO:0005204
RoM2l
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral medial 2 lateral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005205
rostral medial 2 lateral interneuron
RoM2m
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral medial 2 medial interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005206
rostral medial 2 medial interneuron
RoM3l
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral medial 3 lateral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005207
rostral medial 3 lateral interneuron
RoM3m
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rostral medial 3 medial interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005208
rostral medial 3 medial interneuron
hindbrain interneuron
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
midbrain interneuron
CNS interneurons located in the midbrain.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
CNS interneurons located in the midbrain.
ZFIN:Curator
MeL
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesencephalon lateral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005211
mesencephalon lateral interneuron
MeM
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesencephalon medial interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005212
mesencephalon medial interneuron
MeLr
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesencephalon lateral rostral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005213
mesencephalon lateral rostral interneuron
MeLc
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesencephalon lateral caudal interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005214
mesencephalon lateral caudal interneuron
MeLm
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesencephalon lateral medial interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005215
mesencephalon lateral medial interneuron
MeM1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mesencephalon medial 1 interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005216
mesencephalon medial 1 interneuron
CaV
Hindbrain interneuron that is part of rhombomere 7, with 2 ventral neurons in each hemi-rhombomere.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal ventral interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hindbrain interneuron that is part of rhombomere 7, with 2 ventral neurons in each hemi-rhombomere.
ZFIN:ZDB-PUB-961014-770
TAO:0005217
caudal ventral interneuron
CaD
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal dorsal interneuron
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005218
caudal dorsal interneuron
choroid plexus vascular circuit
CVC
Cranial vasculature where the posterior cerebral veins and the trans-choroid plexus branch form a circuit around the 4th ventricle choroid plexus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
choroid vascular circuit
teleost_anatomy_curators
uberon/phenoscape-anatomy
Cranial vasculature where the posterior cerebral veins and the trans-choroid plexus branch form a circuit around the 4th ventricle choroid plexus.
ZFIN:ZDB-PUB-080908-11
TAO:0005219
choroid vascular circuit
CVC
TAO:0005219
larval melanophore stripe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal larval melanophore stripe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral larval melanophore stripe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
lateral larval melanophore stripe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
yolk larval melanophore stripe
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
median fin radial
Radial that is part of a median fin.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
actinophore
actinoste
axonoste
ptérygiophore
Radial that is part of a median fin.
TAO:curator
true
PSPUB:0000173
actinophore
PSPUB:0000141
axonoste
PSPUB:0000163
actinoste
PSPUB:0000164
ptérygiophore
median fin proximal radial
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
baséoste
ptérygiophore proximal
PSPUB:0000138
baséoste
PSPUB:0000164
ptérygiophore proximal
protoneuromast
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
immature neuromast
proto neuromast
proto-neuromast
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005227
proto neuromast
TAO:0005227
immature neuromast
TAO:0005227
proto-neuromast
true
segmented lepidotrichium
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
segmented ray
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005228
segmented ray
obsolete CoBL
A bifurcate interneuron where the axon projects ventrally, crossing the spinal cord ventral to the Mauthner axons before bifurcating and extending dorsally.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
commissural bifurcating longitudinal
incorrectly generalized to teleosts so being obsoleted.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005230
commissural bifurcating longitudinal
A bifurcate interneuron where the axon projects ventrally, crossing the spinal cord ventral to the Mauthner axons before bifurcating and extending dorsally.
ZFIN:ZDB-PUB-010807-17
obsolete bifurcate interneuron
Not in scope of uberon
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete MCoD
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
incorrectly generalized to teleosts so being obsoleted.
multipolar commissural descending interneuron
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005232
multipolar commissural descending interneuron
obsolete CiD
A interneuron of the spinal cord with an ipsilateral axon that extends ventral to the Mauthner axon then turns dorsally and caudally and sometimes has a minor ascending branch.
V2a interneuron
circumferential descending interneuron
incorrectly generalized to teleosts
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005233
V2a interneuron
A interneuron of the spinal cord with an ipsilateral axon that extends ventral to the Mauthner axon then turns dorsally and caudally and sometimes has a minor ascending branch.
ZFIN:ZDB-PUB-010807-17
TAO:0005233
circumferential descending interneuron
obsolete CoLA
A spinal interneuron with a dorsal dendrite that extends caudally. CoLA also has midlateral process that extend rostrally and caudally, the axon crosses the cord dorsal to the Mauthner cell and ascends, extending dorsally. Axon has minor descending branch.
commissural longitudinal ascending interneuron
incorrectly generalized to teleosts
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005234
commissural longitudinal ascending interneuron
A spinal interneuron with a dorsal dendrite that extends caudally. CoLA also has midlateral process that extend rostrally and caudally, the axon crosses the cord dorsal to the Mauthner cell and ascends, extending dorsally. Axon has minor descending branch.
ZFIN:ZDB-PUB-010807-17
obsoelte UCoD
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
incorrectly generalized to teleosts so being obsoleted.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
unipolar commissural descending interneuron
TAO:0005235
unipolar commissural descending interneuron
obsolete micropylar cell
plug cell
replaced by CL_0007022 once cl is released.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005239
plug cell
obsolete Kolmer-Agduhr neuron
KA cell
Kolmer-Agduhr cell
Kolmer-Agduhr neurons are ciliated GABAergic neurons that contact the central canal of the spinal cord and have ipsilateral ascending axons.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
Kolmer-Agduhr neurons are ciliated GABAergic neurons that contact the central canal of the spinal cord and have ipsilateral ascending axons.
ZFIN:ZDB-PUB-080825-21
Kolmer-Agduhr cell
TAO:0005240
KA cell
TAO:0005240
obsolete polychromatophilic erythroblast
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
intermediate erythroblast
intermediate normoblast
polychromatic erythroblast
polychromatic normoblast
polychromatophilic normoblast
rubricyte
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005241
polychromatic normoblast
TAO:0005241
intermediate erythroblast
TAO:0005241
polychromatophilic normoblast
TAO:0005241
polychromatic erythroblast
TAO:0005241
rubricyte
TAO:0005241
intermediate normoblast
obsolete auditory epithelial support cell
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
inter-parietal joint
2012-02-10T04:18:40Z
Fibrous joint connecting the parietal bones.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
sagittal suture
uberon/phenoscape-anatomy
wasila.dahdul
Fibrous joint connecting the parietal bones.
ZFA:ZDB-PUB-060323-12
TAO:0005245
sagittal suture
regeneration fibroblast
Is a fibroblast that differentiates from the de-differentiated cells of the blastema.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
blastemal fibroblast
blastemal fibroblasts
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005246
blastemal fibroblasts
Is a fibroblast that differentiates from the de-differentiated cells of the blastema.
ZFIN:curator
TAO:0005246
blastemal fibroblast
obsolete CiA
Interneurons of the spinal cord that arise from the V1 proliferation domain. The CiA neurons inhibit motoneurons, other ventral interneurons and also inhibit dorsal sensory neurons involved in sensory gating,. CiA have ipsilateral axonal projections in both motor and sensory regions of spinal cord.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
circumferential ascending interneuron
incorrectly generalized to teleosts/vertebrates.
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0005247
circumferential ascending interneuron
Interneurons of the spinal cord that arise from the V1 proliferation domain. The CiA neurons inhibit motoneurons, other ventral interneurons and also inhibit dorsal sensory neurons involved in sensory gating,. CiA have ipsilateral axonal projections in both motor and sensory regions of spinal cord.
ZFIN:ZDB-PUB-040625-12
ZFIN:ZDB-PUB-060418-1
trans-choroid plexus branch
TCB
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0005248
TCB
frontal-parietal joint
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
intervillus pockets
A portion of tissue formed between the base of the intestinal villi that is part of the intestinal epithelium where intestinal stem cells are located. In the intestine no crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
A portion of tissue formed between the base of the intestinal villi that is part of the intestinal epithelium where intestinal stem cells are located. In the intestine no crypts are present, but, the regions between the villi, the intervillus pockets, have a crypt-like function. Cells are produced in the intervillus pockets and shed from the villus tips.
ZFIN:ZDB-PUB-050209-3
supraoccipital-parietal joint
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
hyomandibula-opercle joint
2012-04-09T06:34:33Z
Synovial joint that articulates the hyomandibula and the opercle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haendel
uberon/phenoscape-anatomy
Synovial joint that articulates the hyomandibula and the opercle.
ZFIN:CVS
pterotic fossa
2012-04-09T06:50:18Z
Fossa on the pterotic where the hyomandibula articulates.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haendel
uberon/phenoscape-anatomy
Fossa on the pterotic where the hyomandibula articulates.
ZFIN:ZDB-PUB-961014-192
erector muscle
Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle.
ZFIN:curator
preopercle horizontal limb-symplectic joint
2012-04-09T07:25:19Z
In ZFA, is a type of fibrous joint. May need to stay more general in TAO.
Joint that articulates the posterior edge of the preopercle horizontal limb with the symplectic.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haendel
uberon/phenoscape-anatomy
Joint that articulates the posterior edge of the preopercle horizontal limb with the symplectic.
ZFIN:curator
hypophyseal fenestra
2012-04-09T07:33:26Z
Space enclosed by the trabeculae cranii. The anterior tip of the notochord extends into the posterior region of the hypophyseal fenestra.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haendel
uberon/phenoscape-anatomy
Space enclosed by the trabeculae cranii. The anterior tip of the notochord extends into the posterior region of the hypophyseal fenestra.
ZFIN:ZDB-PUB-961014-192
depressor muscle
A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle.
ZFIN:curator
immature gonad
Immature reproductive tissue that has not undergone final maturation into either testis or ovary. During gonadal development, the gonad may be transiently intersexual where there is a parallel presence of both oocytes and spermatocytes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
juvenile gonad
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005272
juvenile gonad
Immature reproductive tissue that has not undergone final maturation into either testis or ovary. During gonadal development, the gonad may be transiently intersexual where there is a parallel presence of both oocytes and spermatocytes.
ZFIN:ZDB-PUB-070305-2
true
intestinal mucosal muscle
A thin layer of smooth muscle immediately beneath the base of the villi which permits the intestinal mucosa to dynamically move and fold.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
intestinal lamina muscularis mucosae
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
http:www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html
intestinal lamina muscularis mucosae
A thin layer of smooth muscle immediately beneath the base of the villi which permits the intestinal mucosa to dynamically move and fold.
ZFIN:ZDB-PUB-090217-11
hyomandibular foramen
2012-04-09T07:39:00Z
Foramen in the hyomandibula that allows passage of the anterior lateral line nerve and the facial nerve (cranial nerve VII).
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haendel
uberon/phenoscape-anatomy
Foramen in the hyomandibula that allows passage of the anterior lateral line nerve and the facial nerve (cranial nerve VII).
ZFIN:ZDB-PUB-961014-192
inclinator muscle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
preopercle vertical limb-hyomandibula joint
2012-04-09T07:41:34Z
Joint that articulates the anterior edge of the preopercle vertical limb and the hyomandibula.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
haendel
uberon/phenoscape-anatomy
Joint that articulates the anterior edge of the preopercle vertical limb and the hyomandibula.
ZFIN:curator
enteric circular muscle
Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut.
ZFIN:curator
true
distal late tubule
Portion of the renal tubule which is just posterior to the distal early tubule.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the renal tubule which is just posterior to the distal early tubule.
ZFIN:curator
axial blood vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal fin lymph vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
caudal fin blood vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pronephric glomerular capsule epithelium
Simple squamous epithelium that lines the capsule of the pronephric glomerulus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pronephric parietal epithelial layer
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005311
pronephric parietal epithelial layer
true
Simple squamous epithelium that lines the capsule of the pronephric glomerulus.
ZFIN:curator
fin fold pectoral fin bud
Fin fold of the pectoral fin bud, resulting from mesenchyme migration into the apical fold.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
fin membrane pectoral fin bud
fin-fold pectoral fin bud
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
Fin fold of the pectoral fin bud, resulting from mesenchyme migration into the apical fold.
ZFIN:ZDB-PUB-001101-7
ZFIN:ZDB-PUB-990210-18
TAO:0005316
fin membrane pectoral fin bud
true
TAO:0005316
fin-fold pectoral fin bud
pectoral fin fold
The functional webs of the paired fins. They arise as a consequence of apical fold (AER) expansion and of migration of the distal mesenchyme. The fin folds are delimited by a dorsal and a ventral striated epidermis. The cells of the epidermal basal stratum are positioned on a basement membrane. Directly beneath the basement membrane of each side there is an array of actinotrichs, fibers of the extracellular matrix which act as supportive elements of the larval fin folds.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin-fold
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005317
pectoral fin-fold
The functional webs of the paired fins. They arise as a consequence of apical fold (AER) expansion and of migration of the distal mesenchyme. The fin folds are delimited by a dorsal and a ventral striated epidermis. The cells of the epidermal basal stratum are positioned on a basement membrane. Directly beneath the basement membrane of each side there is an array of actinotrichs, fibers of the extracellular matrix which act as supportive elements of the larval fin folds.
ZFIN:ZDB-PUB-990210-18
true
intersegmental lymph vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
islv
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005319
islv
dorsal longitudinal lymphatic vessel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dllv
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005320
dllv
gill ionocyte
Ionocyte located in the gills
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Ionocyte located in the gills
ZFIN:curator
integument ionocyte
Ionocyte located in the integument during embryonic and larval stages.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
extrabranchial ionocyte
skin ionocyte
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005325
skin ionocyte
Ionocyte located in the integument during embryonic and larval stages.
ZFIN:curator
TAO:0005325
extrabranchial ionocyte
NaK ionocyte
Integument ionocyte rich in Na,K-ATPase.
NaK-MRC
NaR cell
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
NaR cell
TAO:0005326
Integument ionocyte rich in Na,K-ATPase.
ZFIN:curator
NaK-MRC
TAO:0005326
vH ionocyte
HR cell
Integument ionocyte rich in vacuolar-type H+ ATPase and carbonic anhydrase
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
VH-MRC
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005327
VH-MRC
Integument ionocyte rich in vacuolar-type H+ ATPase and carbonic anhydrase
ZFIN:curator
HR cell
TAO:0005327
presumptive swim bladder
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
posterior recess
Posterior protrusion of the third ventricle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
posterior recess of diencephalic ventricle
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005338
posterior recess of diencephalic ventricle
Posterior protrusion of the third ventricle.
ZFIN:curator
nucleus of the lateral recess
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
nucleus of the posterior recess
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
medial longitudinal catecholaminergic tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
mlct
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0005341
mlct
endohypothalamic tract
CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus.
ZFIN:ZDB-PUB-091221-28
preopticohypothalamic tract
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
extrapancreatic duct
Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla.
ZFIN:ZDB-PUB-050623-3
true
dorsal fin pterygiophore 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin pterygiophore 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin pterygiophore 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin pterygiophore 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin pterygiophore 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin pterygiophore 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin pterygiophore 8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 1
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 2
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin distal radial 8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 3
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 4
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 5
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 6
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 7
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorsal fin proximal radial 8
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
pars superior ear
The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle.
ZFIN:curator
true
pars inferior ear
The ventral portion of the ear. It contains the saccule and the laguena which are the primary auditory organs.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
The ventral portion of the ear. It contains the saccule and the laguena which are the primary auditory organs.
ZFIN:curator
true
true
common crus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
transverse canal
Duct that crosses the midline connecting the sacculi.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Duct that crosses the midline connecting the sacculi.
ZFIN:curator
inner ear foramen
Foramen in the inner ear.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
Foramen in the inner ear.
ZFIN:curator
sacculoagenar foramen
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
dorso-rostral cluster
Early-forming telencephalic neural cluster. Neurons of the dorso-rostral cluster (drc) extend axons to form the supra-optic tract (SOT) and the anterior commissure (AC). Ross et al., 1992.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsorostral cluster
drc
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0007001
dorsorostral cluster
TAO:0007001
drc
Early-forming telencephalic neural cluster. Neurons of the dorso-rostral cluster (drc) extend axons to form the supra-optic tract (SOT) and the anterior commissure (AC). Ross et al., 1992.
ZFIN:curator
true
ventro-rostral cluster
Early-forming neural cluster located in the rostral diencephalon. At 19 h, axons arising from the vrc grow caudally to pioneer the tract of the postoptic commissure (TPOC). Ross et al., 1992.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventrorostral cluster
vrc
Early-forming neural cluster located in the rostral diencephalon. At 19 h, axons arising from the vrc grow caudally to pioneer the tract of the postoptic commissure (TPOC). Ross et al., 1992.
ZFIN:curator
TAO:0007002
ventrorostral cluster
TAO:0007002
vrc
true
ventro-caudal cluster
Early-forming neural cluster of the ventral midbrain. At 16 h, axons of the vcc grow caudally to pioneer the medial longitudinal fasciculus (MLF), which is part of the larger ventral longitudinal tract (VLT). Later, neurons from this cluster project axons rostrally into the tract of the post-optic commissure (TPOC). Ross et al., 1992.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
vcc
ventrocaudal cluster
TAO:0007003
vcc
Early-forming neural cluster of the ventral midbrain. At 16 h, axons of the vcc grow caudally to pioneer the medial longitudinal fasciculus (MLF), which is part of the larger ventral longitudinal tract (VLT). Later, neurons from this cluster project axons rostrally into the tract of the post-optic commissure (TPOC). Ross et al., 1992.
ZFIN:curator
TAO:0007003
ventrocaudal cluster
epiphysial cluster
Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer axon of the dorsoventral diencephalic tract (DVDT) has arisen from the ec and grown ventrally. As this axon encounters axons of the TPOC, it makes a near-90 rostral turn and grows rostrally among axons of the TPOC growing in the opposite direction. Ross et al., 1992.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ec
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
TAO:0007004
ec
Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer axon of the dorsoventral diencephalic tract (DVDT) has arisen from the ec and grown ventrally. As this axon encounters axons of the TPOC, it makes a near-90 rostral turn and grows rostrally among axons of the TPOC growing in the opposite direction. Ross et al., 1992.
ZFIN:curator
hemal prezygapophysis
Hemal prezygapophyses are paired, anteromedially directed processes arising from the bases of hemal arches, ligamentously joined to the hemal postzygapophyses of the preceding vertebra. Posterior caudal vertebrae close to the caudal fin lack hemal prezygopophyses.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2001380
haemal prezygapophysis
hemal prezygopophysis
teleost_anatomy_curators
uberon/phenoscape-anatomy
Hemal prezygapophyses are paired, anteromedially directed processes arising from the bases of hemal arches, ligamentously joined to the hemal postzygapophyses of the preceding vertebra. Posterior caudal vertebrae close to the caudal fin lack hemal prezygopophyses.
ZFIN:curator
true
TAO:0007005
hemal prezygopophysis
TAO:0007005
haemal prezygapophysis
true
ventral intermandibularis anterior
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral intermandibulari anterior
TAO:0007008
ventral intermandibulari anterior
eminentia thalami
Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Part of the forebrain that is ventral to the ventral thalamus and dorsal to the preoptic area. See page 44 of the Atlas of Early Zebrafish Brain Development.
ZFIN:curator
true
obsolete vagal root
Part of cranial nerve X.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
rX
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
vagus root
TAO:0007011
vagus root
Part of cranial nerve X.
ZFIN:curator
TAO:0007011
rX
lateral forebrain bundle
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
preplacodal ectoderm
Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes.
ZFIN:curator
anterior presumptive neural plate
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
posterior presumptive neural plate
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
posterior neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
anterior neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
midbrain neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
forebrain neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
forebrain midbrain boundary neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
spinal cord neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
hindbrain neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
posterior neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
anterior neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
midbrain neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
forebrain midbrain boundary neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
forebrain neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
spinal cord neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
hindbrain neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
forebrain midbrain boundary neural tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
forebrain neural tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
spinal cord neural tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
hindbrain neural tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
true
midbrain hindbrain boundary neural keel
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
midbrain hindbrain boundary neural rod
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
midbrain hindbrain boundary neural tube
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral intermandibularis posterior
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral intermandibulari posterior
TAO:0007048
ventral intermandibulari posterior
constrictor dorsalis
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral interhyoideus
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral interhyoidei
TAO:0007051
ventral interhyoidei
hyohyoideus
Is a hyoid muscle that inserts at the most anterior basibranchial and also at the posterior ends of the ceratohyals and functions in jaw closure.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
hyohyoidei
teleost_anatomy_curators
uberon/phenoscape-anatomy
Is a hyoid muscle that inserts at the most anterior basibranchial and also at the posterior ends of the ceratohyals and functions in jaw closure.
ZFIN:ZDB-PUB-020703-2
TAO:0007052
hyohyoidei
dorsal adductor hyomandibulae
Is a hyoid muscle that attaches to the dorsomedial faces of the hyosymplectics.
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
Is a hyoid muscle that attaches to the dorsomedial faces of the hyosymplectics.
ZFIN:ZDB-PUB-020703-2
pillar of the anterior semicircular canal
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anterior hub of the semicircular canal
anterior pillar
anterior pillar of the semicircular canal
horizontal hub
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0007054
anterior pillar
TAO:0007054
anterior hub of the semicircular canal
TAO:0007054
anterior pillar of the semicircular canal
TAO:0007054
horizontal hub
pillar of the lateral semicircular canal
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
lateral hub of the semicircular canal
teleost_anatomy_curators
uberon/phenoscape-anatomy
ventral bar
ventral pillar
ventral piller of the semicircular canal
TAO:0007055
ventral pillar
TAO:0007055
ventral piller of the semicircular canal
TAO:0007055
lateral hub of the semicircular canal
TAO:0007055
ventral bar
neurogenic field
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
true
dorsolateral field
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
epibranchial field
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
teleost_anatomy_curators
uberon/phenoscape-anatomy
olfactory field
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
olfactory fields
teleost_anatomy_curators
uberon/phenoscape-anatomy
TAO:0007062
olfactory fields
obsolete vagal ganglion
This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:0005362
gX
teleost_anatomy_curators
true
uberon/phenoscape-anatomy
TAO:0007067
gX
alary cartilage
Paired, cup-shaped cartilage that are dorsal to the septomaxillae and anterior to the oblique cartilage. The anterior, convex face of each alary cartilage is synchondrotically fused to the superior prenasal cartilage and the ventral edge is fused to the superior margin of the crista intermedia.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
alinasal cartilage
amphibian_anatomy_curators
cartilago alaris
cartilago alaris nasi
cartilago cupullaris
copula anterior
naseflngelknorpel
processus alaris
second upper labial
uberon/phenoscape-anatomy
true
UBERON:3000002
alinasal cartilage
UBERON:3000002
cartilago cupullaris
AAO:LAP
Paired, cup-shaped cartilage that are dorsal to the septomaxillae and anterior to the oblique cartilage. The anterior, convex face of each alary cartilage is synchondrotically fused to the superior prenasal cartilage and the ventral edge is fused to the superior margin of the crista intermedia.
UBERON:3000002
second upper labial
UBERON:3000002
copula anterior
UBERON:3000002
cartilago alaris nasi
UBERON:3000002
naseflngelknorpel
true
UBERON:3000002
processus alaris
true
UBERON:3000002
cartilago alaris
alary process of premaxilla
Dorsal process that extends toward the nasal bone. The posterior (inner) face of each alary process is concave and is invested dorsomedially by the superior prenasal cartilage and ventromedially by the inferior prenasal cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
dorsal process of premaxilla
pars dorsalis of premaxilla
pars facialis of premaxilla
pars frontalis of premaxilla
pars prenasalis of premaxilla
premaxillary spine
processus ascendens of premaxilla
processus frontalis of premaxilla
processus nasalis of premaxilla
uberon/phenoscape-anatomy
UBERON:3000003
processus ascendens of premaxilla
UBERON:3000003
pars facialis of premaxilla
true
UBERON:3000003
dorsal process of premaxilla
UBERON:3000003
processus nasalis of premaxilla
UBERON:3000003
pars prenasalis of premaxilla
UBERON:3000003
pars frontalis of premaxilla
AAO:LAP
Dorsal process that extends toward the nasal bone. The posterior (inner) face of each alary process is concave and is invested dorsomedially by the superior prenasal cartilage and ventromedially by the inferior prenasal cartilage.
UBERON:3000003
processus frontalis of premaxilla
UBERON:3000003
pars dorsalis of premaxilla
true
UBERON:3000003
premaxillary spine
true
alveolar foramen
Foramen for the R. alveolaris of Nerve VII and the alveolar artery.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
inferior dental foramen
uberon/phenoscape-anatomy
AAO:LAP
Foramen for the R. alveolaris of Nerve VII and the alveolar artery.
UBERON:3000006
inferior dental foramen
angulosplenial coronoid process
Point of insertion of the adductor mandibulae musculature.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Point of insertion of the adductor mandibulae musculature.
anterior maxillary process
Process that extends anteriorly from the planum triangulare and invests the medial face of the pars facialis of the maxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Process that extends anteriorly from the planum triangulare and invests the medial face of the pars facialis of the maxilla.
anterior nasal wall
Paired, vertical, and relatively straight plates that form the anterior limit of the nasal capsule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
prenasal wall
solum anterius
uberon/phenoscape-anatomy
UBERON:3000016
prenasal wall
AAO:LAP
Paired, vertical, and relatively straight plates that form the anterior limit of the nasal capsule.
true
UBERON:3000016
solum anterius
anterior process of pars palatina of maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
anterior ramus of pterygoid
In a triradiate pterygoid, the process that extends anteriorly towards the maxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
ramus maxillaris of pterygoid
uberon/phenoscape-anatomy
true
true
UBERON:3000018
ramus maxillaris of pterygoid
true
AAO:LAP
In a triradiate pterygoid, the process that extends anteriorly towards the maxilla.
anterolateral process of frontoparietal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
antorbital process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
ascending process of palatoquadrate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
apophyse ascendens
cartilage craniofacial
oberste abteilung des zweiten visceralbogens
pedicle
pediculus
processus ascendens of palatoquadrate
schlafenflugelknorpel
uberon/phenoscape-anatomy
UBERON:3000031
schlafenflugelknorpel
true
UBERON:3000031
processus ascendens of palatoquadrate
true
UBERON:3000031
cartilage craniofacial
UBERON:3000031
oberste abteilung des zweiten visceralbogens
UBERON:3000031
apophyse ascendens
UBERON:3000031
pedicle
true
UBERON:3000031
pediculus
true
auditory muscles
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
basal process of palatoquadrate
Process that extends medially from the ventromedial corner of the palatoquadrate cartilage and articulates or fuses to the anterior wall of the otic capsule via the basitrabecular process.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus basalis
uberon/phenoscape-anatomy
AAO:LAP
Process that extends medially from the ventromedial corner of the palatoquadrate cartilage and articulates or fuses to the anterior wall of the otic capsule via the basitrabecular process.
true
true
true
true
UBERON:3000036
processus basalis
basicranial fenestra
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral opening of the neurocranium.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Ventral opening of the neurocranium.
basimandibulare
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
Bidder's organ
Anatomical structure which forms from an enlargement of the anterior portion of each gonad in all male bufonid larvae and consists of ovarian tissues.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:BJB
Anatomical structure which forms from an enlargement of the anterior portion of each gonad in all male bufonid larvae and consists of ovarian tissues.
obsolete blastomere
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010282
Undifferentiated cell that is produced by early cleavages of the fertilized egg (zygote).
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Undifferentiated cell that is produced by early cleavages of the fertilized egg (zygote).
braincase and auditory apparatus
The part of the skull that encloses the brain and surrounds the inner ear.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
The part of the skull that encloses the brain and surrounds the inner ear.
braincase and otic capsule opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
braincase and otic capsule skeleton
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
canalis semicircularis anterior
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
capsular process
Narrow process of the skeletal support that projects forward.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Narrow process of the skeletal support that projects forward.
true
obsolete cartilage bridge of nasal skeleton
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete forelimb opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
cartilago ectochoanalis
Lateral cartilaginous border of the fenestra endochoanalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Lateral cartilaginous border of the fenestra endochoanalis.
cartilago infranarina
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
cartilago orbitalis
Lateral wall of chondrocranial braincase between lamina orbitonasalis and pila metoptica.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
dorsale randspange
uberon/phenoscape-anatomy
UBERON:3000074
dorsale randspange
true
AAO:LT
Lateral wall of chondrocranial braincase between lamina orbitonasalis and pila metoptica.
cartilago prootico-occipitalis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
cartilago retronarina
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
cavum inferius
Accessory cavity located ventral to the cavum principale and cavum medius.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Accessory cavity located ventral to the cavum principale and cavum medius.
cavum internasale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
cavum medius
Small accessory cavity located between the cavum principale and cavum inferius.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Small accessory cavity located between the cavum principale and cavum inferius.
cavum praenasale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
cavum principale
The largest part of the nasal cavity, containing the olfactory epithelium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
AAO:LAP
The largest part of the nasal cavity, containing the olfactory epithelium.
obsolete connective tissue proper
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
hyale
Anterior-lateral projections from the corpus of the hyoid apparatus.
Found in Anura (frogs) only.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
anterior cornua
uberon/phenoscape-anatomy
true
crista contacta
Thin, horizontal ridge that extends medially from the corpus of the septomaxilla; it lays on the lamina inferior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Thin, horizontal ridge that extends medially from the corpus of the septomaxilla; it lays on the lamina inferior.
true
crista dentalis of maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
crista dentalis of premaxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
dental ridge of premaxilla
uberon/phenoscape-anatomy
true
true
UBERON:3000112
dental ridge of premaxilla
true
crista intermedia
Paired, oblique plates of cartilage located ventral to the alary cartilages. The dorsomedial margin of each crista intermedia is fused to the transitional zone between the septum nasi and the tectum nasi, whereas the ventrolateral margin bears two laminae, the lamina superior and the lamina inferior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Paired, oblique plates of cartilage located ventral to the alary cartilages. The dorsomedial margin of each crista intermedia is fused to the transitional zone between the septum nasi and the tectum nasi, whereas the ventrolateral margin bears two laminae, the lamina superior and the lamina inferior.
crista lateralis of premaxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
crista subnasalis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral crest of the paries nasi.
amphibian_anatomy_curators
subnasal crest
uberon/phenoscape-anatomy
UBERON:3000117
subnasal crest
true
AAO:LAP
Ventral crest of the paries nasi.
crista supraorbitalis
Short and blunt process that extends posteriorly from the posteromedial margin of the postnasal wall, on the anterodorsal corner of the orbit above the medial orbitonasal foramen.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Short and blunt process that extends posteriorly from the posteromedial margin of the postnasal wall, on the anterodorsal corner of the orbit above the medial orbitonasal foramen.
obsolete dense connective tissue
Also known as fibrous connective tissue. Forms ligaments and tendons and is characterized by densely packed collagen fibers that have great tensile strength.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:LAP
Also known as fibrous connective tissue. Forms ligaments and tendons and is characterized by densely packed collagen fibers that have great tensile strength.
dilatatio alaris
Flange that extends ventrally from about the middle portion of the margo mandibularis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ventral flange of anterior ramus of pterygoid
UBERON:3000131
ventral flange of anterior ramus of pterygoid
true
AAO:LAP
Flange that extends ventrally from about the middle portion of the margo mandibularis.
true
obsolete dorsal plate
Term describes shape of tectum nasi
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
endolymphatic system
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
extremitas anterior
Large anterior outgrowth of the septomaxilla that is directed into the space between the alary cartilage and the lamina inferior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
anterior ramus
uberon/phenoscape-anatomy
true
UBERON:3000155
anterior ramus
true
AAO:LAP
Large anterior outgrowth of the septomaxilla that is directed into the space between the alary cartilage and the lamina inferior.
fenestra dorsalis nasi
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
fenestra endochoanalis
Opening on the ventral aspect of the nasal capsule. It contains the apertura nasalis interna.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
fenestra exochoanalis
uberon/phenoscape-anatomy
AAO:LAP
Opening on the ventral aspect of the nasal capsule. It contains the apertura nasalis interna.
UBERON:3000161
fenestra exochoanalis
fenestra endonarina communis
Opening on the anterolateral aspect of the nasal capsule. It contains the apertura nasalis externa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
apertura nasalis externa
fenestra narina
narial fenestra
uberon/phenoscape-anatomy
UBERON:3000162
narial fenestra
AAO:LAP
Opening on the anterolateral aspect of the nasal capsule. It contains the apertura nasalis externa.
UBERON:3000162
fenestra narina
UBERON:3000162
apertura nasalis externa
fenestra lateralis nasi
Opening on the lateral side of the nasal capsule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
fenestra infraconchalis
fenestra retronarina
uberon/phenoscape-anatomy
UBERON:3000164
fenestra infraconchalis
UBERON:3000164
fenestra retronarina
AAO:LAP
Opening on the lateral side of the nasal capsule.
fenestra nasobasalis
Small opening at the anterior tip of the nasal capsule, on the floor of the cavum inferius. It is located medially to the base of the inferior prenasal cartilage and serves for the passage of the ramus medialis narium and arteria orbitonasalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
basal fenestra
fenestra basalis nasi
foramen apicale
foramen epiphaniale
nasobasal fenestra
uberon/phenoscape-anatomy
AAO:LAP
Small opening at the anterior tip of the nasal capsule, on the floor of the cavum inferius. It is located medially to the base of the inferior prenasal cartilage and serves for the passage of the ramus medialis narium and arteria orbitonasalis.
UBERON:3000166
fenestra basalis nasi
UBERON:3000166
foramen epiphaniale
UBERON:3000166
foramen apicale
UBERON:3000166
nasobasal fenestra
UBERON:3000166
basal fenestra
fenestra nasolateralis
Elongated opening located on the lateral side of the nasal capsule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Elongated opening located on the lateral side of the nasal capsule.
fenestra precerebralis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
fenestra prechoanalis
Large opening of the nasal floor anterior to the fenestra endochoanalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Large opening of the nasal floor anterior to the fenestra endochoanalis.
flange of quadratojugal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
footplate of pars media plectri
Independent, horizontal bar of cartilage located on the anterior part of the fenestra ovalis in front of the pars interna plectri.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
fenestral plate
interstapediale
otostapes
pars otica columellae
pseudooperculum
uberon/phenoscape-anatomy
UBERON:3000178
otostapes
UBERON:3000178
pars otica columellae
UBERON:3000178
interstapediale
AAO:LAP
Independent, horizontal bar of cartilage located on the anterior part of the fenestra ovalis in front of the pars interna plectri.
true
UBERON:3000178
fenestral plate
UBERON:3000178
pseudooperculum
foramen acusticum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
acoustic foramen
amphibian_anatomy_curators
uberon/phenoscape-anatomy
UBERON:3000179
acoustic foramen
foramen acusticum anterius
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen acusticum maius
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen acusticum minus
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen acusticum posterius
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen endolymphaticum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
endolymphatic foramen
uberon/phenoscape-anatomy
UBERON:3000185
endolymphatic foramen
foramen orbitonasale laterale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen orbitonasale mediale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
canalis orbitonasalis
canalis orbitonasalis medialis
foramen orbitonasale
uberon/phenoscape-anatomy
UBERON:3000190
canalis orbitonasalis medialis
UBERON:3000190
canalis orbitonasalis
UBERON:3000190
foramen orbitonasale
foramen perilymphaticum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen perilymphaticum accessorium
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
foramen perilymphaticus inferius
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
foramen pro aquaeducto cochleae
inferior perilymphatic foramen
uberon/phenoscape-anatomy
UBERON:3000195
inferior perilymphatic foramen
UBERON:3000195
foramen pro aquaeducto cochleae
obsolete frontoparietal constriction
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
frontoparietal fontanelle
Dorsal opening of the neurocranium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Dorsal opening of the neurocranium.
hyobranchial muscles
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
hyolaryngeal complex
Complex formed by two units, the hyoid and laryngeal apparatuses, which are both derived from the larval hyobranchial skeleton.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Complex formed by two units, the hyoid and laryngeal apparatuses, which are both derived from the larval hyobranchial skeleton.
true
inferior prenasal cartilage
Elongate cartilage that extends anteroventrally from the solum nasi to abut the ventral portion of the posterior aspect of the alary process of the premaxilla. It was first described by Wiedersheim in 1876.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
inferior prenasal process
processus prenasalis inferior
processus prenasalis inferior lateralis
uberon/phenoscape-anatomy
true
true
UBERON:3000234
processus prenasalis inferior lateralis
true
UBERON:3000234
processus prenasalis inferior
AAO:LAP
Elongate cartilage that extends anteroventrally from the solum nasi to abut the ventral portion of the posterior aspect of the alary process of the premaxilla. It was first described by Wiedersheim in 1876.
UBERON:3000234
inferior prenasal process
infrarostral cartilage
Larval lower jaw lies anterior to Meckels cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
infralabial cartilage
mentomeckelian cartilage
uberon/phenoscape-anatomy
true
UBERON:3000237
infralabial cartilage
true
AAO:EJS
Larval lower jaw lies anterior to Meckels cartilage.
UBERON:3000237
mentomeckelian cartilage
true
lamella alaris
Dorsal plate of the squamosal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
horizontal arm of squamosal
uberon/phenoscape-anatomy
true
true
UBERON:3000254
horizontal arm of squamosal
AAO:LAP
Dorsal plate of the squamosal.
lamina anterior of pars facialis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
lamina inferior
Lateral expansion of the crista intermedia that serves as the floor of the cavum medium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
lamina inferior cristae intermediae
uberon/phenoscape-anatomy
AAO:LAP
Lateral expansion of the crista intermedia that serves as the floor of the cavum medium.
UBERON:3000259
lamina inferior cristae intermediae
true
true
lamina nariochoanalis
Free, dorsal margin of the lamina inferior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Free, dorsal margin of the lamina inferior.
true
true
lamina precerebralis
Posterior face of septum nasi.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Posterior face of septum nasi.
true
lamina superior
Lateral expansion of the crista intermedia that serves as the roof of the cavum medium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
lamina superior cristae intermediae
uberon/phenoscape-anatomy
UBERON:3000264
lamina superior cristae intermediae
AAO:LAP
Lateral expansion of the crista intermedia that serves as the roof of the cavum medium.
true
obsolete larval structure
Anatomical structure that is part of the larva.
Obsolete term in XAO. redundant with stage+skeletal system. Can be properly reinstated if needed.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:EJS
Anatomical structure that is part of the larva.
margo mandibularis of pterygoid
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventrally directed margin that connects the anterior and posterior rami of the pterygoid.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Ventrally directed margin that connects the anterior and posterior rami of the pterygoid.
margo orbitalis of maxilla
Dorsal margin of the maxilla between the frontal and zygomatico-maxillary processes.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Dorsal margin of the maxilla between the frontal and zygomatico-maxillary processes.
true
true
margo orbitalis of pterygoid
Margin that connects the anterior and medial rami of the pterygoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Margin that connects the anterior and medial rami of the pterygoid.
true
true
margo orbitalis of squamosal
Anterior margin of the squamosal that takes part in the formation of the orbit.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior margin of the squamosal that takes part in the formation of the orbit.
true
true
margo tympanicus of pterygoid
Margin that connects the posterior and medial rami of the pterygoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Margin that connects the posterior and medial rami of the pterygoid.
true
true
maxillopalatine
A compound bone consisting of maxilla and palatine, can also contain a prefrontal and/or lacrimal; present in adult Gymnophiona.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
A compound bone consisting of maxilla and palatine, can also contain a prefrontal and/or lacrimal; present in adult Gymnophiona.
AAO:EJS
true
medial inferior prenasal cartilage
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
medial orbitonasal foramen
Opening on the postnasal wall for the medial branch (= ramus medialis nasi) of the ophthalmicus nerve.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Opening on the postnasal wall for the medial branch (= ramus medialis nasi) of the ophthalmicus nerve.
medial ramus of pterygoid
In a triradiate pterygoid, the process that extends medially towards the otic capsule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
ramus interior of pterygoid
uberon/phenoscape-anatomy
true
UBERON:3000292
ramus interior of pterygoid
AAO:LAP
In a triradiate pterygoid, the process that extends medially towards the otic capsule.
true
true
median prenasal process
Anterior projection of the septum nasi that protrudes through the anterior nasal wall.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus prenasalis medius
uberon/phenoscape-anatomy
true
AAO:LAP
Anterior projection of the septum nasi that protrudes through the anterior nasal wall.
true
UBERON:3000294
processus prenasalis medius
median symphysis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
narial muscles
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
nasal opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
nasopremaxilla
A compound bone consisting of premaxilla, nasal and sometimes septomaxilla in adult members of Caeciliidae and Typhlonectidae.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A compound bone consisting of premaxilla, nasal and sometimes septomaxilla in adult members of Caeciliidae and Typhlonectidae.
AAO:EJS
true
true
oblique cartilage
Semi-circular cartilaginous sheet that lies lateral to the side of the septum nasi.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
cartilago obliqua
cartilago obliqua nasi
cartilago obliquo
dorsal process
lamina obliqua
uberon/phenoscape-anatomy
UBERON:3000329
cartilago obliqua nasi
true
UBERON:3000329
cartilago obliqua
AAO:LAP
Semi-circular cartilaginous sheet that lies lateral to the side of the septum nasi.
UBERON:3000329
dorsal process
true
true
UBERON:3000329
cartilago obliquo
UBERON:3000329
lamina obliqua
oculomotor foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
olfactory foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
optic fenestra
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
orbitonasal foramen
Foramen that forms a passage for one of the branches of the trigeminal nerve into the nasal region.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Foramen that forms a passage for one of the branches of the trigeminal nerve into the nasal region.
obsolete os articulare
Ossified posterior articular portion of Meckel's cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:LAP
Ossified posterior articular portion of Meckel's cartilage.
os basale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
obsolete other muscles
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
otic ligament
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
otic plate of pterygoid
Osseous expansion of the posterior and medial rami of the pterygoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Osseous expansion of the posterior and medial rami of the pterygoid.
otic process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
otic ramus of squamosal
Ramus (process) that extends medially toward the otic capsule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
posterior ramus
ramus paroticus
uberon/phenoscape-anatomy
UBERON:3000367
ramus paroticus
true
AAO:LAP
Ramus (process) that extends medially toward the otic capsule.
true
true
UBERON:3000367
posterior ramus
otoccipital
Fused prootic and exoccipital bones.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Fused prootic and exoccipital bones.
obsolete palatine
Sliver of bone that invest part of or all the posterior aspect of each antorbital plane.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
neopalatine
true
uberon/phenoscape-anatomy
AAO:LAP
Sliver of bone that invest part of or all the posterior aspect of each antorbital plane.
UBERON:3000372
neopalatine
palatine process of pars palatina of premaxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
median palatal squame
uberon/phenoscape-anatomy
true
true
true
UBERON:3000374
median palatal squame
palatine process of the pars facialis of the maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
palatine tooth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Logical definition added by cjm.
UBERON:0012073
amphibian_anatomy_curators
palatine teeth
true
uberon/phenoscape-anatomy
UBERON:3000376
palatine teeth
palatoquadrate articular process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
paranasal commissure
Cartilaginous bridge that extends posteriorly to the anterolateral corner of the posterior nasal wall.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
commissura lateralis nasi
connection between lamina nariochoanalis and postnasal wall
processus lingularis
uberon/phenoscape-anatomy
UBERON:3000381
commissura lateralis nasi
true
UBERON:3000381
connection between lamina nariochoanalis and postnasal wall
UBERON:3000381
processus lingularis
true
true
AAO:LAP
Cartilaginous bridge that extends posteriorly to the anterolateral corner of the posterior nasal wall.
parasagittal crest
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
cultriform process
Process that extends anteriorly from the orbitotemporal region.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
pars medialis
rostrum
uberon/phenoscape-anatomy
AAO:LAP
Process that extends anteriorly from the orbitotemporal region.
UBERON:3000386
pars medialis
UBERON:3000386
rostrum
true
true
true
true
subotic alae
Paired processes extending lateraly from the posterior body of the parasphenoid that, when present, support the otic capsules ventrally.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus lateralis
uberon/phenoscape-anatomy
true
true
UBERON:3000387
processus lateralis
true
true
AAO:LAP
Paired processes extending lateraly from the posterior body of the parasphenoid that, when present, support the otic capsules ventrally.
parasphenoid tooth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
parasphenoid teeth
uberon/phenoscape-anatomy
true
UBERON:3000388
parasphenoid teeth
true
paries nasi
Paired, elongate, ventrolaterally-orieted cartilaginous structures that extend to the premaxilla-maxilla articulation.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Paired, elongate, ventrolaterally-orieted cartilaginous structures that extend to the premaxilla-maxilla articulation.
true
pars amphibiorum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pars articularis of mandibular arch
Posterior end of Meckel's cartilage that forms the articular head of the mandibular arch.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Posterior end of Meckel's cartilage that forms the articular head of the mandibular arch.
true
pars basilaris
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pars dentalis of maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth-bearing part of the maxilla.
amphibian_anatomy_curators
crista dentalis
uberon/phenoscape-anatomy
true
UBERON:3000396
crista dentalis
true
AAO:LAP
Tooth-bearing part of the maxilla.
pars dentalis of premaxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth-bearing part of the premaxilla.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Tooth-bearing part of the premaxilla.
pars externa plectri
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
extracolumellare
extrapediale
extraplectral
extrastapes
hyostapes
medio-stapedial
pars quadrata columellae
uberon/phenoscape-anatomy
UBERON:3000399
extracolumellare
UBERON:3000399
medio-stapedial
UBERON:3000399
extrastapes
UBERON:3000399
hyostapes
UBERON:3000399
pars quadrata columellae
UBERON:3000399
extrapediale
UBERON:3000399
extraplectral
true
pars facialis of maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pars facialis of maxillopalatine
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pars inferior of labyrinth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pars interna plectri
Plate-like structure that lies in the fenestra ovalis. It arises within the membrana opercularis in the posterior part of the fenestra.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
operculum auris
operculum fenestrae ovalis
uberon/phenoscape-anatomy
true
UBERON:3000406
operculum fenestrae ovalis
AOO:LAP
Plate-like structure that lies in the fenestra ovalis. It arises within the membrana opercularis in the posterior part of the fenestra.
UBERON:3000406
operculum auris
pars media plectri
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
pars palatina of maxilla
Lingual ledge on the inner surface of the maxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
lamina horizontalis
uberon/phenoscape-anatomy
true
UBERON:3000413
lamina horizontalis
AAO:LAP
Lingual ledge on the inner surface of the maxilla.
true
pars palatina of premaxilla
Lingual ledge on the inner surface of the premaxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Lingual ledge on the inner surface of the premaxilla.
true
true
perilymphatic system
Consists of enlarged cistern against which the operculum and footplate of the columella rest in the oval window. Together with the endolymphatic systems comprises the membranous labryinth of the inner ear. Duellman and Trueb 1994.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pila antoptica
A strut of cartilage extending dorsally from the basal plate and with other similar cartilages forming the sides of the brain case. The pila antoptica is posterior to pila metoptica together with which it may enclose the foramen for the ocular motor nerve and opthalmica magna artery.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
pila metoptica
A strut of cartilage extending dorsally from the basal plate and with other similar cartilages forming the sides of the brain case. The pila metoptica is anterior to pila antoptica together with which it may enclose the foramen for the ocular motor nerve and opthalmica magna artery. Anterior to the pila antoptica is the pila preoptica (another pillar of cartilage) between these two cartilages emerges the optic and trochlear nerves.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
pineal foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
planum antorbitale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
planum conchale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
planum internasale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
planum terminale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertical plate of cartilage that is fused posterodorsally to the oblique cartilage and anteriorly to the lamina inferior.
amphibian_anatomy_curators
pars terminalis
terminal plate
uberon/phenoscape-anatomy
AAO:LAP
Vertical plate of cartilage that is fused posterodorsally to the oblique cartilage and anteriorly to the lamina inferior.
true
UBERON:3000440
terminal plate
UBERON:3000440
pars terminalis
planum triangulare
Cartilaginous, distal expansion of the lamina orbitonasalis that invests the pars facialis of the maxilla medially.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Cartilaginous, distal expansion of the lamina orbitonasalis that invests the pars facialis of the maxilla medially.
true
plectral apparatus
Complex sound-conducting anatomical structure.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Complex sound-conducting anatomical structure.
posterior condyle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
posterior maxillary process
Process that extends posteriorly from the planum triangulare and invests the maxilla laterally and the anterior ramus of the pterygoid medially.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Process that extends posteriorly from the planum triangulare and invests the maxilla laterally and the anterior ramus of the pterygoid medially.
posterior maxillary process dorsal process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
posterior mental process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
posterior ramus of pterygoid
In a triradiate pterygoid, the process that extends posterolaterally towards the jaw articulation.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
In a triradiate pterygoid, the process that extends posterolaterally towards the jaw articulation.
true
posterolateral vomerine process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
postnasal wall
Paired, anteriorly concave structures that form the posterior limit of nasal capsule. It consists of two parts: a ventral piece, the lamina orbitonasalis, and a dorsal plate that is part of the tectum nasi.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Paired, anteriorly concave structures that form the posterior limit of nasal capsule. It consists of two parts: a ventral piece, the lamina orbitonasalis, and a dorsal plate that is part of the tectum nasi.
prearticular coronoid process
Point of insertion of the masticatory musculature.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Point of insertion of the masticatory musculature.
true
true
obsolete premaxillary tooth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Modified by cjm: added logical definition
amphibian_anatomy_curators
premaxillary teeth
true
uberon/phenoscape-anatomy
UBERON:2001626
UBERON:3000464
premaxillary teeth
preorbital process of the pars facialis of the maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
presumptive central nervous system
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
obsolete presumptive epidermis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
presumptive integument
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
presumptive nervous system
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
processus ascendens plectri
Cartilaginous or ligamentous connection between the pars externa plectri and the crista parotica.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
laterohyale
processus ascendens columellae
processus dorsalis columellae
processus superior columellae
suprastapediale
uberon/phenoscape-anatomy
UBERON:3000486
processus ascendens columellae
AAO:LAP
Cartilaginous or ligamentous connection between the pars externa plectri and the crista parotica.
true
UBERON:3000486
processus dorsalis columellae
true
UBERON:3000486
laterohyale
UBERON:3000486
suprastapediale
UBERON:3000486
processus superior columellae
processus infrafenestralis
Posterior part of the corpus of the septomaxilla; the posterior surface of the processus infrafenestralis is in contact with the oblique cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
dorsal crest
uberon/phenoscape-anatomy
AAO:LAP
Posterior part of the corpus of the septomaxilla; the posterior surface of the processus infrafenestralis is in contact with the oblique cartilage.
UBERON:3000492
dorsal crest
true
true
true
processus internus of pseudoangular
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
processus internus
true
true
true
processus lingualis of pterygoid
Dorsolateral process of the of the medial ramus of the pterygoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Dorsolateral process of the of the medial ramus of the pterygoid.
true
processus posterior of maxilla
Posterior, toothless portion of the maxilla by which it usually comes in contact with the quadratojugal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Posterior, toothless portion of the maxilla by which it usually comes in contact with the quadratojugal.
true
true
processus pterygoideus of maxilla
Posterior end of the pars palatina of the maxilla that is in contact with the anterior ramus of the pterygoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Posterior end of the pars palatina of the maxilla that is in contact with the anterior ramus of the pterygoid.
true
true
true
processus suprafenestralis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
processus zygomatico-maxillaris
Posterodorsal extension of the maxilla by which it establishes contact with the squamosal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Posterodorsal extension of the maxilla by which it establishes contact with the squamosal.
true
true
pseudoangular
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
pseudobasal process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
pseudodentary
Compound bone of adult Gymnophiona, consisting of dentary, coronoid and mentomeckelian.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Compound bone of adult Gymnophiona, consisting of dentary, coronoid and mentomeckelian.
true
pseudodentary tooth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Logical definition added by cjm.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
cjm
true
cjm
pterygoid
Palatal bones of intramembranous origin that lie anterior to the otic capsules, lateral to the orbits, and medial to the maxillae.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
pterygoidien
true
uberon/phenoscape-anatomy
UBERON:0010389
UBERON:3000521
pterygoidien
AAO:LAP
Palatal bones of intramembranous origin that lie anterior to the otic capsules, lateral to the orbits, and medial to the maxillae.
pterygoid process of palatoquadrate
Process that extends anteriorly from the anterolateral margin of the palatoquadrate and articulates or synchondrotically fuses to the posterior end of the posterior maxillary process.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Process that extends anteriorly from the anterolateral margin of the palatoquadrate and articulates or synchondrotically fuses to the posterior end of the posterior maxillary process.
true
true
true
true
pterygoquadrate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
quadrate process of palatoquadrate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
recessus fenestrae ovalis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
recessus marsupiatus of premaxilla
Is a recess on the surface of the premaxilla near to the base of the pars facialis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
recessus vaginiformis
Is a space on the interior surface of the pars facialis of the maxilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
retroarticular process
Bony process that is part of the articular and is the point of insertion of the m. interhuoideus posterior.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Bony process that is part of the articular and is the point of insertion of the m. interhuoideus posterior.
true
rostral process
Is a process of the nasal bone directed anteriorly towards the rostrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
septum semicircularium anterior
The anterior connective tissue partition between walls of otic capsule around which the membranous semicircular canals pass.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
septum semicircularium laterale
The lateral connective tissue partition between walls of otic capsule around which the membranous semicircular canals pass.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
septum semircularium posterior
The posterior connective tissue partition between walls of otic capsule around which the membranous semicircular canals pass.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
seydels palatal process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
skeletal support for eminentia olfactoria
Elevation of the dorsal surface of the solum nasi medial to the fenestra endochoanalis that provides support for the eminentia olfactoria.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Elevation of the dorsal surface of the solum nasi medial to the fenestra endochoanalis that provides support for the eminentia olfactoria.
true
solum nasi
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Unpaired, horizontal plate that forms the floor of the nasal capsule.
amphibian_anatomy_curators
nasal floor
planum basale
solum nasale
uberon/phenoscape-anatomy
true
AAO:LAP
Unpaired, horizontal plate that forms the floor of the nasal capsule.
UBERON:3000569
planum basale
UBERON:3000569
nasal floor
UBERON:3000569
solum nasale
spatium sacculare
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
specialized connective tissue
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
sphenethmoid
Endochondral bone that forms the anterior portion of the braincase and forms from one ossification center on each side of the orbital cartilage.
Os sphenethmoidale
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
orbitosphenoid
orbitotemporal
uberon/phenoscape-anatomy
Os sphenethmoidale
UBERON:3000572
UBERON:3000572
orbitotemporal
UBERON:3000572
orbitosphenoid
AAO:LAP
Endochondral bone that forms the anterior portion of the braincase and forms from one ossification center on each side of the orbital cartilage.
stylus of pars media plectri
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
columella
columella auris
columellare
interstapediale
mediostapediale
mesostapediale
os columellare
os intermedium
stapes
stelidium
stilus columellare
uberon/phenoscape-anatomy
UBERON:3000580
os intermedium
UBERON:3000580
stapes
UBERON:3000580
os columellare
UBERON:3000580
stelidium
UBERON:3000580
stilus columellare
UBERON:3000580
columella
true
UBERON:3000580
columellare
UBERON:3000580
columella auris
UBERON:3000580
mesostapediale
UBERON:3000580
interstapediale
UBERON:3000580
mediostapediale
sulcus dentalis of maxilla
Groove located between the pars dentalis and the bases of the maxillary teeth.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Groove located between the pars dentalis and the bases of the maxillary teeth.
sulcus dentalis of premaxilla
Groove located between the pars dentalis and the bases of the premaxillary teeth.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
sulcus for Meckels cartilage
A groove on the palatoquadrate that is occupied by the Meckel's cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
superior prenasal cartilage
Paired, elongate cartilages that extend anteroventrally to abut the dorsomedial margin of the posterior face of the alary process of the premaxilla. The function of these cartilages is to transmit the movement of the premaxilla to the alary cartilages during the closure of the apertura nasalis externa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Paired, elongate cartilages that extend anteroventrally to abut the dorsomedial margin of the posterior face of the alary process of the premaxilla. The function of these cartilages is to transmit the movement of the premaxilla to the alary cartilages during the closure of the apertura nasalis externa.
obsolete supraangular
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
The suprangular or surangular is a jaw bone found in most land vertebrates, except mammals. It's usually in the back of the jaw, on the upper edge, and is connected to all other jaw bones: dentary, angular, splenial and articular. It is often a muscle attachment site.
obsolete supraoccipital
Median, unpaired bone that can form the dorsal margin of the foramen magnum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010834
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:curator
Median, unpaired bone that can form the dorsal margin of the foramen magnum.
supraorbital flange
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
true
suprasphenoid
Endochondral ossification of the dorsomedial portion of the braincase.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Endochondral ossification of the dorsomedial portion of the braincase.
symphysis maxillaris
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
taenia tecti marginalis
Cartilaginous connection between the orbital cartilage and otic capsules.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
tectum nasi
Roof of the nasal capsule, confluent with lamina orbitonasalis posteriorly and united to septum nasi.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
tectum nasale
uberon/phenoscape-anatomy
AAO:LAP
Roof of the nasal capsule, confluent with lamina orbitonasalis posteriorly and united to septum nasi.
UBERON:3000601
tectum nasale
true
tentacular foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
trochlear foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
tympanosquamosal
Central, funnel-shaped, ossified portion of the tympanic annulus fused to the squamosal bone.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Central, funnel-shaped, ossified portion of the tympanic annulus fused to the squamosal bone.
ventral ramus of squamosal
Longest of the three squamosal rami; it invests the dorsolateral margin of the palatoquadrate. The distal end of the ventral ramus invests the quadrate and articulates with the quadratojugal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus posterolateralis
uberon/phenoscape-anatomy
AAO:LAP
Longest of the three squamosal rami; it invests the dorsolateral margin of the palatoquadrate. The distal end of the ventral ramus invests the quadrate and articulates with the quadratojugal.
UBERON:3000628
processus posterolateralis
true
true
vomerine canal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
zygomatic ramus of squamosal
Ramus (process) that projects anteriorly from the dorsal body of the squamosal and forms part of the posterior margin of the orbit.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Ramus (process) that projects anteriorly from the dorsal body of the squamosal and forms part of the posterior margin of the orbit.
true
true
arcus praeoccipitalis
Skeletal structure that separates the inferior and superior perilymphatic foramina.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Skeletal structure that separates the inferior and superior perilymphatic foramina.
true
maxillopalatine tooth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon. Logical definition added by cjm
amphibian_anatomy_curators
uberon/phenoscape-anatomy
cjm
true
cjm
processus lingularis of nasal skeleton
Rod-shaped process that extends caudally from the inferior edge of the planum terminale.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
lingular process
uberon/phenoscape-anatomy
processus lingularis
AAO:LAP
Rod-shaped process that extends caudally from the inferior edge of the planum terminale.
UBERON:3000644
lingular process
true
corpus
Basal part of the septomaxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010459
amphibian_anatomy_curators
centrum
pars horizontalis
uberon/phenoscape-anatomy
true
true
AAO:LAP
Basal part of the septomaxilla.
true
UBERON:3000645
centrum
UBERON:3000645
pars horizontalis
margo libera
Anterior, rounded portion of the corpus of the septomaxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior, rounded portion of the corpus of the septomaxilla.
true
true
crista interna
Sharp ridge that extends medially from the basal part of the processus infrafenestralis; it separates the diverticulum proncipale from the diverticulum medium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Sharp ridge that extends medially from the basal part of the processus infrafenestralis; it separates the diverticulum proncipale from the diverticulum medium.
true
true
true
crista praeopercularis
Synchondrotic or synostotic connection between the footplate of the pars media plectri and the ventral margin of the fenestra ovalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Synchondrotic or synostotic connection between the footplate of the pars media plectri and the ventral margin of the fenestra ovalis.
true
true
anterior process of vomer
Process that extends anterolaterally toward the maxilla-premaxilla articulation.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Process that extends anterolaterally toward the maxilla-premaxilla articulation.
true
true
processus frontalis of maxilla
Anterio portion of the maxilla that may contact the nasal and take part in the formation of a groove for the nasolacrimal duct.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus praeorbitalis of the pars facialis
uberon/phenoscape-anatomy
processus frontalis
UBERON:3000650
processus praeorbitalis of the pars facialis
AAO:LAP
Anterio portion of the maxilla that may contact the nasal and take part in the formation of a groove for the nasolacrimal duct.
true
true
true
lamina anterior of maxilla
Most anterior part of the maxilla, which is in contact with the premaxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Most anterior part of the maxilla, which is in contact with the premaxilla.
fossa maxillaris
Alternative more fish orientated definition.
A fossa that is a depression in the proximal end of the maxilla involved in articulation with the palatine. [Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.]
Depression lacated on the inner surface of the maxilla between the palatine process and the pars palatina.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
maxillary saddle
uberon/phenoscape-anatomy
AAO:LAP
Depression lacated on the inner surface of the maxilla between the palatine process and the pars palatina.
pars glenoidalis of quadratojugal
Portion of the quadratojugal that makes contact dorsally with the distal portion of the squamosal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Portion of the quadratojugal that makes contact dorsally with the distal portion of the squamosal.
true
true
pars jugalis
Anterior part of the quadratojugal that is in contact with the processus posterior of the maxilla.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior part of the quadratojugal that is in contact with the processus posterior of the maxilla.
true
true
processus dorsalis of lamella alaris
Dorsal process of the lamella alaris located at the anterior end of the margo orbitalis; a narrow ligament that runs from the frontoparietal is attached to it.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
processus dorsailis
true
true
true
AAO:LAP
Dorsal process of the lamella alaris located at the anterior end of the margo orbitalis; a narrow ligament that runs from the frontoparietal is attached to it.
processus posterodorsalis of lamella alaris
Posterior process of the lamella alaris.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
processus posterodorsalis
true
true
true
AAO:LAP
Posterior process of the lamella alaris.
dentigerous process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Tooth-bearing process of the vomer.
amphibian_anatomy_curators
torus dentigerous
uberon/phenoscape-anatomy
true
AAO:LAP
Tooth-bearing process of the vomer.
true
true
UBERON:3000657
torus dentigerous
prechoanal process
Process that extends laterally from the anterior process; its bifurcation from the postchoanal process occurs at the level of the dentigerous process.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus choanalis anterior
uberon/phenoscape-anatomy
true
AAO:LAP
Process that extends laterally from the anterior process; its bifurcation from the postchoanal process occurs at the level of the dentigerous process.
true
true
UBERON:3000658
processus choanalis anterior
postchoanal process
Process that extends laterally from the anterior process; its bifurcation from the prechoanal process occurs at the level of the dentigerous process.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus choanalis posterior
uberon/phenoscape-anatomy
true
true
AAO:LAP
Process that extends laterally from the anterior process; its bifurcation from the prechoanal process occurs at the level of the dentigerous process.
true
UBERON:3000659
processus choanalis posterior
margo choanalis
Margin between the prechoanal and postchoanal process. It bounds the fenestra endochoanalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Margin between the prechoanal and postchoanal process. It bounds the fenestra endochoanalis.
true
true
crista vomeri
Ridge on the dorsal surface of the vomer that runs from the anterior to the postchoanal processes of the vomer; it takes part in the fixation of the bone to the lateral margin of the solum nasi.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Ridge on the dorsal surface of the vomer that runs from the anterior to the postchoanal processes of the vomer; it takes part in the fixation of the bone to the lateral margin of the solum nasi.
true
true
processus posterior of parasphenoid
Posterior projection of the median part of the parsphenoid, which may extend over the posterior margins of the subotic alae.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
processus posterior
true
true
true
true
AAO:LAP
Posterior projection of the median part of the parsphenoid, which may extend over the posterior margins of the subotic alae.
parahyoid
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
hyoid plate
Azygous or paired bone that occurs on the ventral surface of the hyoid plate.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Azygous or paired bone that occurs on the ventral surface of the hyoid plate.
true
pars reuniens
Area of fusion of the ceratohyals.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Area of fusion of the ceratohyals.
hyoglossal sinus
A anuran (frog) term
Is the space along the anterior edge of the hyoid plate between the hyale and through which passes the hyoglossus muscle as it passes dorsally into the tongue.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
anterior process of hyoid apparatus
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
anterolateral process of hyoid plate
Processes that flank the hyales laterally and extend anterolaterally from the anterolateral margin of the hyoid plate. They are formed as a result of new cartilaginous growth lateral to the basibranchial.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus alaris
processus anterolateralis
processus lateralis anterior
uberon/phenoscape-anatomy
true
AAO:LAP
Processes that flank the hyales laterally and extend anterolaterally from the anterolateral margin of the hyoid plate. They are formed as a result of new cartilaginous growth lateral to the basibranchial.
UBERON:3000671
processus lateralis anterior
UBERON:3000671
processus alaris
UBERON:3000671
processus anterolateralis
posterolateral process
Paired processes that extend posterolaterally from the posterolateral margin of the hyoid plate. These processes are formed as a result of new cartilaginous growth lateral to the basibranchial and hypobranchial plate.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Paired processes that extend posterolaterally from the posterolateral margin of the hyoid plate. These processes are formed as a result of new cartilaginous growth lateral to the basibranchial and hypobranchial plate.
posteromedial process
Cartilaginous, paired processes that extend posterolaterally from the posterior margin of the hyoid plate. These processes invest the laryngeal apparatus and are ossified in the adult.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
cornua posteriores
hyoid
uberon/phenoscape-anatomy
UBERON:3000673
cornua posteriores
true
AAO:LAP
Cartilaginous, paired processes that extend posterolaterally from the posterior margin of the hyoid plate. These processes invest the laryngeal apparatus and are ossified in the adult.
UBERON:3000673
hyoid
bronchial process
Paired processes that extend posteroventrally from the anterolateral margins of the cricoid ring.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus trachealis
uberon/phenoscape-anatomy
AAO:LAP
Paired processes that extend posteroventrally from the anterolateral margins of the cricoid ring.
true
UBERON:3000676
processus trachealis
true
true
lateral process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
esophageal process
Median process located on the posterior end of the cricoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
spina oesophagea
uberon/phenoscape-anatomy
true
UBERON:3000678
spina oesophagea
AAO:LAP
Median process located on the posterior end of the cricoid cartilage.
true
true
manubrium of hyale
Proximal section of the hyale.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus anteriores
uberon/phenoscape-anatomy
true
UBERON:3000680
processus anteriores
AAO:LAP
Proximal section of the hyale.
hyoid apparatus opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
sinus nervi hypoglossi
Depression that houses the hypoglossus nerve and is located between the anterolateral process and the proximal part of the hyale.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Rocek_2003
Depression that houses the hypoglossus nerve and is located between the anterolateral process and the proximal part of the hyale.
foramen nervi hypoglossi
Foramen that houses the hypoglossus nerve and is located between the anterolateral process and the proximal part of the hyale.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
foramen laterale
uberon/phenoscape-anatomy
AAO:Rocek_2003
Foramen that houses the hypoglossus nerve and is located between the anterolateral process and the proximal part of the hyale.
UBERON:3000685
foramen laterale
processus confluens
Strip of cartilage that forms the lateral margin of the foramen nervi hypoglossi.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus alaris
uberon/phenoscape-anatomy
true
AAO:LAP
Strip of cartilage that forms the lateral margin of the foramen nervi hypoglossi.
UBERON:3000687
processus alaris
prominentia apicalis dorsalis
Anterior end of the arytenoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
prominentia apicalis anterior
uberon/phenoscape-anatomy
true
true
UBERON:3000688
prominentia apicalis anterior
AAO:LAP
Anterior end of the arytenoid cartilage.
true
prominentia apicalis ventralis
Posterior (cardiac) end of the arytenoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
prominentia apicalis posterior
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Posterior (cardiac) end of the arytenoid cartilage.
UBERON:3000689
prominentia apicalis posterior
pedicel
Paired stalks located dorsolateral to the vertebral centrum that provide support to the lateral margins of the neural arch laminae.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Paired stalks located dorsolateral to the vertebral centrum that provide support to the lateral margins of the neural arch laminae.
true
atlantal cotyle
Anterior, single or paired concave facets for articulation with the condyle(s) of the urostyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
cavitas glenoidalis
uberon/phenoscape-anatomy
true
AAO:Francis_1934
Anterior, single or paired concave facets for articulation with the condyle(s) of the urostyle.
UBERON:3000694
cavitas glenoidalis
posterior intervertebral notch
Indentation on the anterior margin of the pedicel. When two vertebrae articulate, the anterior notch of one vertebra and the posterior notch of the other create a bilateral intervertebral space.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Indentation on the anterior margin of the pedicel. When two vertebrae articulate, the anterior notch of one vertebra and the posterior notch of the other create a bilateral intervertebral space.
intervertebral space
Space formed by the anterior and posterior intervertebral notches. The intervertebral spaces accommodate the spinal nerves as they emerge from the spinal canal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
intervertebral space
uberon/phenoscape-anatomy
UBERON:3000701
intervertebral space
AAO:LAP
Space formed by the anterior and posterior intervertebral notches. The intervertebral spaces accommodate the spinal nerves as they emerge from the spinal canal.
anterior intervertebral notch
Indentation on the posterior margin of the pedicel. When two vertebrae articulate, the anterior notch of one vertebra and the posterior notch of the other create a bilateral intervertebral space.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Indentation on the posterior margin of the pedicel. When two vertebrae articulate, the anterior notch of one vertebra and the posterior notch of the other create a bilateral intervertebral space.
pleurapophysis
Paired processes that represent the rib attachments to the vertebra plus the ribs.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Duellman_and_Trueb_1994
Paired processes that represent the rib attachments to the vertebra plus the ribs.
procoelous
Holochordal vertebral centra that are concave anteriorly and convex posteriorly; they bear a condyle on the posterior end for the articulation with the posterior adjacent vertebral centrum, forming a ball-and-socket joint that allows extensive motion in most directions.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Pugener_2002
AAO:Trueb_1973
Holochordal vertebral centra that are concave anteriorly and convex posteriorly; they bear a condyle on the posterior end for the articulation with the posterior adjacent vertebral centrum, forming a ball-and-socket joint that allows extensive motion in most directions.
opisthocoelous
Ectochordal or stegochordal vertebral centra that are convex anteriorly and concave posteriorly; they bear a condyle on the anterior end for the articulation with the posterior adjacent vertebral centrum, forming a ball-and-socket joint that allows extensive motion in most directions.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Pugener_2002
AAO:Trueb_1973
Ectochordal or stegochordal vertebral centra that are convex anteriorly and concave posteriorly; they bear a condyle on the anterior end for the articulation with the posterior adjacent vertebral centrum, forming a ball-and-socket joint that allows extensive motion in most directions.
epichordal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebral centrum that originates from ossification of the dorsal portion of the perichordal tube; the resulting element tends to be depressed in cross section.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Kluge_and_Farris_1969
Vertebral centrum that originates from ossification of the dorsal portion of the perichordal tube; the resulting element tends to be depressed in cross section.
perichordal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebral centrum that originates from ossification of the entire perichordal tube; the resulting element is cylindrical in cross section and may have an open (notochord retained) or solid center.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Kluge_and_Farris_1969
Vertebral centrum that originates from ossification of the entire perichordal tube; the resulting element is cylindrical in cross section and may have an open (notochord retained) or solid center.
heterocoelous
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebral centrum that bears saddle-shaped articular surfaces at both ends, having a convexity in the right-left axis and a concavity in the dorsoventral axis. This morphology allows great lateral and vertical flexion.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Vertebral centrum that bears saddle-shaped articular surfaces at both ends, having a convexity in the right-left axis and a concavity in the dorsoventral axis. This morphology allows great lateral and vertical flexion.
acoelous
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebral centrum with flat ends. Between successive vertebrae there is a fibrocartilaginous intervertebral body with a gel-like core, the nucleus pulposus, which is derived from the embryonic notochord. Acoelous vertebrae seem especially suited to receive and distribute compressive forces within the vertebral column.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Vertebral centrum with flat ends. Between successive vertebrae there is a fibrocartilaginous intervertebral body with a gel-like core, the nucleus pulposus, which is derived from the embryonic notochord. Acoelous vertebrae seem especially suited to receive and distribute compressive forces within the vertebral column.
amphicoelous
Ectochordal, biconcave or terminally flat vertebral centrum. This design seems to allow limited motion in most directions. An intervertebral body (which may or may not be independent from the adjacent centra) fills the cavity between successive centra. The intervertebral body usually is formed by soft material that may be derived, at least in part, from the embryonic notochord.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Pugener_2002
AAO:Trueb_1973
Ectochordal, biconcave or terminally flat vertebral centrum. This design seems to allow limited motion in most directions. An intervertebral body (which may or may not be independent from the adjacent centra) fills the cavity between successive centra. The intervertebral body usually is formed by soft material that may be derived, at least in part, from the embryonic notochord.
ectochordal
Spool-shaped vertebral centrum with an open center in which the notochord lies.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Griffiths_1959
Spool-shaped vertebral centrum with an open center in which the notochord lies.
holochordal
Spool-shaped vertebral centrum with a solid center. All traces of the notochord dissapear.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Griffiths_1959
Spool-shaped vertebral centrum with a solid center. All traces of the notochord dissapear.
stegochordal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebral centrum that is depressed dorsoventrally and solid. All traces of the notochord dissapear.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Griffiths_1959
Vertebral centrum that is depressed dorsoventrally and solid. All traces of the notochord dissapear.
haemal arch lamina
Paired plates that form the haemal arch. The lateral margin of each lamina is firmly attached to the ventral surface of the caudal vertebral centrum and the medial end fuses to the medial end of the opposite lamina.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Pugener_2002
Paired plates that form the haemal arch. The lateral margin of each lamina is firmly attached to the ventral surface of the caudal vertebral centrum and the medial end fuses to the medial end of the opposite lamina.
true
nucal keel
Longitudinal process found in all cervical vertebrae, except the atlas, for the attachment of dorsal head musculature.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:Duellman_and_Trueb_1994
Longitudinal process found in all cervical vertebrae, except the atlas, for the attachment of dorsal head musculature.
foramen nutritium
Opening on the lateral side of the vertebra for the passage of blood vessels.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Opening on the lateral side of the vertebra for the passage of blood vessels.
mid-dorsal keel
Ridge-shaped structure present on the dorsomedial surface of the neural arch lamina; this structure is produced at the point of junction of the contralateral sides of each neural arch.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Pugener_2002
Ridge-shaped structure present on the dorsomedial surface of the neural arch lamina; this structure is produced at the point of junction of the contralateral sides of each neural arch.
obsolete deltopectoral crest
Ridge on the ventral aspect of the humeral shaft. It serves for the attachment of the mm pectoralis and shoulder musculature used primarily for limb adduction.
UBERON:0002498
amphibian_anatomy_curators
crista ventralis
crista ventralis humeri
deltoid crest
true
uberon/phenoscape-anatomy
AAO:LAP
Ridge on the ventral aspect of the humeral shaft. It serves for the attachment of the mm pectoralis and shoulder musculature used primarily for limb adduction.
UBERON:3000736
deltoid crest
UBERON:3000736
crista ventralis humeri
sacral condyle
Anterior, paired convex facets for articulation with the cotyle(s) of the urostyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior, paired convex facets for articulation with the cotyle(s) of the urostyle.
true
urostyle cotyle
Anterior, single or paired concave facets for articulation with the sacral condyle(s).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
fossa condyloidea ossis coccygei
uberon/phenoscape-anatomy
AAO:LAP
Anterior, single or paired concave facets for articulation with the sacral condyle(s).
true
UBERON:3000744
fossa condyloidea ossis coccygei
webbing of bone
In anurans, pair of bony plates that connect the posteromedial margins of the sacral diapophyses with the lateral margins of the anterior portion of the urostyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Pugener_and_Maglia_2008
In anurans, pair of bony plates that connect the posteromedial margins of the sacral diapophyses with the lateral margins of the anterior portion of the urostyle.
urostyle ridge
Longitudinal crest on the dorsal side of the urostyle formed by the caudal neural arches.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
crista ossi coccygei
uberon/phenoscape-anatomy
true
AAO:Maglia_et_al_2007
Longitudinal crest on the dorsal side of the urostyle formed by the caudal neural arches.
UBERON:3000746
crista ossi coccygei
suprascapula
Paired, cartilaginous elements located in the dorsolateral shoulder region. Each suprascapula is a flat broad blade that extends medially.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
adscapulum
amphibian_anatomy_curators
episcapulum
omolita
scapula major
uberon/phenoscape-anatomy
UBERON:3000748
omolita
UBERON:3000748
adscapulum
UBERON:3000748
episcapulum
AAO:LAP
Paired, cartilaginous elements located in the dorsolateral shoulder region. Each suprascapula is a flat broad blade that extends medially.
UBERON:3000748
scapula major
pars acromialis
Prominent structure (anteromedial head) that forms the anterior section of the ventral margin of the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Prominent structure (anteromedial head) that forms the anterior section of the ventral margin of the scapula.
pars glenoidalis of scapula
Concave structure (posteromedial head) that forms the posterior head of the ventral margin of the scapula. The pars glenoidalis articulates with the humerus, and comprises the dorsal portion of the glenoid fossa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
glenoid head of scapula
uberon/phenoscape-anatomy
AAO:LAP
Concave structure (posteromedial head) that forms the posterior head of the ventral margin of the scapula. The pars glenoidalis articulates with the humerus, and comprises the dorsal portion of the glenoid fossa.
pectoral girdle opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
crista dorsalis humeri
Small hooked process on the dorsal aspect of the humeral shaft; it does not extend on to the glenoid head. The m subscapularis is inserted on it.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
crista dorsalis
uberon/phenoscape-anatomy
UBERON:3000756
crista dorsalis
true
AAO:LAP
Small hooked process on the dorsal aspect of the humeral shaft; it does not extend on to the glenoid head. The m subscapularis is inserted on it.
true
zonal area
All those parts of the pectoral girdle ventral and medial to the glenoid fossa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
All those parts of the pectoral girdle ventral and medial to the glenoid fossa.
omosternum
Proximal portion of the prezonal element of the pectoral girdle. It may be a flat, midventral cartilaginous structure or a calcified or bony element elaborated into a stylum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
episternum
interclavicle
prezonal element
prezonal sternum
sternum superior
uberon/phenoscape-anatomy
UBERON:3000759
prezonal sternum
AAO:LAP
Proximal portion of the prezonal element of the pectoral girdle. It may be a flat, midventral cartilaginous structure or a calcified or bony element elaborated into a stylum.
UBERON:3000759
interclavicle
UBERON:3000759
prezonal element
UBERON:3000759
episternum
UBERON:3000759
sternum superior
epicoracoid
Paired, flat cartilaginous arches that compose the central portion of the zonal area, unites the clavicle and coracoid of each half of the pectoral girdle, and form the medial margins of the pectoral fenestrae.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
coracoid cartilage
corpus sterni
entosternal
infracoracoid
sterni ossa media
uberon/phenoscape-anatomy
AAO:LAP
Paired, flat cartilaginous arches that compose the central portion of the zonal area, unites the clavicle and coracoid of each half of the pectoral girdle, and form the medial margins of the pectoral fenestrae.
UBERON:3000762
entosternal
UBERON:3000762
infracoracoid
UBERON:3000762
corpus sterni
UBERON:3000762
sterni ossa media
UBERON:3000762
coracoid cartilage
epicoracoid bridge
A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project anteriorly. They articulate anteriorly with the omosternum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
procoracoid bridge
uberon/phenoscape-anatomy
UBERON:3000763
procoracoid bridge
A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project anteriorly. They articulate anteriorly with the omosternum.
AAO:LAP
pelvic girdle opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
acetabular depression
Central, most concave portion of the acetabulum, which remains open.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Central, most concave portion of the acetabulum, which remains open.
ilial ridge
Longitudinal crest on the dorsal side of the shaft of the ilium.
ala ossis ilei
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
UBERON:3000773
ala ossis ilei
true
AAO:LAP
Longitudinal crest on the dorsal side of the shaft of the ilium.
ilial shaft
Anterior rod that articulates with the sacrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior rod that articulates with the sacrum.
true
obsolete ilial corpus
Posterior body of the ilium that forms the anterior half of the acetabulum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:LAP
Posterior body of the ilium that forms the anterior half of the acetabulum.
glenoid foramen
Opening on the glenoid fossa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Opening on the glenoid fossa.
epicoracoid horn
A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project posteriorly. They articulate with the sternum by means of grooves, pouches or fossae in the dorsal surface of the sternum and provide a site for the insertion of a pair of muscles derived from the m. rectus abdominis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project posteriorly. They articulate with the sternum by means of grooves, pouches or fossae in the dorsal surface of the sternum and provide a site for the insertion of a pair of muscles derived from the m. rectus abdominis.
AAO:LAP
supracoracoid foramen
Opening on the scapulocoracoid bone through which passes the n. supracoracoideus and the corresponding artery and vein.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
foramen supracoracoideum
uberon/phenoscape-anatomy
AAO:LAP
Opening on the scapulocoracoid bone through which passes the n. supracoracoideus and the corresponding artery and vein.
UBERON:3000778
foramen supracoracoideum
pectoral fenestra
Ovoid space on the pectoral girdle limited anteriorly by the procoracoid, medially by the epicoracoid, and posteriorly by the coracoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
fenestra between procoracoid and coracoid
uberon/phenoscape-anatomy
UBERON:3000779
fenestra between procoracoid and coracoid
AAO:LAP
Ovoid space on the pectoral girdle limited anteriorly by the procoracoid, medially by the epicoracoid, and posteriorly by the coracoid.
incisura coracoidea
Notch that separates the cartilaginous regions of the procoracoid and coracoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Notch that separates the cartilaginous regions of the procoracoid and coracoid.
fovea capitis of humerus
Ovoid roughened pit, which is situated a little below and behind the center of the head, and serves as a site of attachment for ligaments.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
Not to be confused with the fovea capitis of the femur
true
true
AAO:LAP
Ovoid roughened pit, which is situated a little below and behind the center of the head, and serves as a site of attachment for ligaments.
ulnar condyle
Semi-elliptical ball located at the lower end of the humerus, adjacent to the humeral ball.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
medial condyle
uberon/phenoscape-anatomy
true
UBERON:3000784
medial condyle
AAO:LAP
Semi-elliptical ball located at the lower end of the humerus, adjacent to the humeral ball.
trochlear groove of humerus
Furrow between the humeral head and the ulnar condyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Furrow between the humeral head and the ulnar condyle.
fossa cubitalis ventralis
Depresion on the distal end of the humerus, just anterior to the humeral head, in which the end of the radius fits when the forelimb is flexed.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Depresion on the distal end of the humerus, just anterior to the humeral head, in which the end of the radius fits when the forelimb is flexed.
collum antibrachii
In a fused radio-ulna, the proximal portion of the compound bone (where the sulcus longitudinalis is barely evident or absent) is a cylindrical pillar.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
In a fused radio-ulna, the proximal portion of the compound bone (where the sulcus longitudinalis is barely evident or absent) is a cylindrical pillar.
anterior ramus of cleithrum
Subdivision of the cleithrum that extends along the anterior edge of the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Subdivision of the cleithrum that extends along the anterior edge of the suprascapula.
true
true
true
anomocoelous
Stegochordal slightly biconcave or flat terminally vertebral centrum. Each intervertebral cartilage is subdivided anteriorly and posteriorly, producing a free intervertebral element between adjacent vertebrae. This element subsequently ossifies and remains free.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Trueb_1973
Stegochordal slightly biconcave or flat terminally vertebral centrum. Each intervertebral cartilage is subdivided anteriorly and posteriorly, producing a free intervertebral element between adjacent vertebrae. This element subsequently ossifies and remains free.
displasiocoelous
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vertebral column in which the first seven vertebrae have holochordal centra and the intervertebral cartilages are posteriorly subdivided in the procoelous manner. The eighth presacral vertebra has a holochordal centrum and the intervertebral cartilage is subdivided in the opisthocoelous manner. Thus, the first seven presacral vertebrae are concave anteriorly and convex posteriorly, whereas the eighth is biconcave.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Trueb_1973
Vertebral column in which the first seven vertebrae have holochordal centra and the intervertebral cartilages are posteriorly subdivided in the procoelous manner. The eighth presacral vertebra has a holochordal centrum and the intervertebral cartilage is subdivided in the opisthocoelous manner. Thus, the first seven presacral vertebrae are concave anteriorly and convex posteriorly, whereas the eighth is biconcave.
imbricate neural arch
Overlapping neural arches that obscure the spinal cord dorsally.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Trueb_1973
Overlapping neural arches that obscure the spinal cord dorsally.
non-imbricate neural arch
Neural arches that do not overlap, thus exposing the spinal cord dorsally.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Trueb_1973
Neural arches that do not overlap, thus exposing the spinal cord dorsally.
presacral shield
Dorsal, dermal plate of bone that overlies the presacral vertebrae. Such shield usually has irregular, sculptured surfaces, frequently is broadly expanded, and may be composed of several separate plates.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Trueb_1973
Dorsal, dermal plate of bone that overlies the presacral vertebrae. Such shield usually has irregular, sculptured surfaces, frequently is broadly expanded, and may be composed of several separate plates.
cartilago paraglenoidalis
Strip of cartilage that separates the coracoid from the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Strip of cartilage that separates the coracoid from the scapula.
intercotylar space
Space between the atlantal cotyles.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
spatium interglenoidale
uberon/phenoscape-anatomy
UBERON:3000800
spatium interglenoidale
AAO:LAP
Space between the atlantal cotyles.
caput glenoidale
Convex articular facet of the vertebral centrum for the articulation with the adjacent centrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Convex articular facet of the vertebral centrum for the articulation with the adjacent centrum.
fossa glenoidalis
Concave articular facet of the vertebral centrum for the articulation with the adjacent centrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Concave articular facet of the vertebral centrum for the articulation with the adjacent centrum.
true
sulcus articularis lateralis
In a zygapophysis that has ridges and sulci, the lateral canal between the carina distalis and the carina medialis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
In a zygapophysis that has ridges and sulci, the lateral canal between the carina distalis and the carina medialis.
true
sulcus articularis medialis
In a zygapophysis that has ridges and sulci, the medial canal between the carina medialis and the carina proximalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
In a zygapophysis that has ridges and sulci, the medial canal between the carina medialis and the carina proximalis.
carina proximalis
In a zygapophysis that has ridges and sulci, the proximal ridge.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
In a zygapophysis that has ridges and sulci, the proximal ridge.
carina medialis
In a zygapophysis that has ridges and sulci, the medial ridge.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
In a zygapophysis that has ridges and sulci, the medial ridge.
carina distalis
In a zygapophysis that has ridges and sulci, the distal ridge.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
In a zygapophysis that has ridges and sulci, the distal ridge.
parasagittal processes
Paired, posteriorly directed process at the posterior margin of each neural arch lamina.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:Cannatella_1985
Paired, posteriorly directed process at the posterior margin of each neural arch lamina.
accessory articulation
Paired, additional vertebral articulations located medial to the intervertebral space, adjacent to the vertebral centrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Cannatella_1985
Paired, additional vertebral articulations located medial to the intervertebral space, adjacent to the vertebral centrum.
fissura sagittalis
Medial groove in the longitudinal ridge of the urostyle formed by the incomplete dorsal fusion of the caudal neural arches.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Maglia_et_al_2007
Medial groove in the longitudinal ridge of the urostyle formed by the incomplete dorsal fusion of the caudal neural arches.
true
glenoid end of clavicle
Lateral end of the clavicle, which usually lies in close proximity to the pars acromialis of the scapula, and occassionally may fuse to it.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
extremitas glenoidalis
uberon/phenoscape-anatomy
UBERON:3000811
extremitas glenoidalis
true
AAO:LAP
Lateral end of the clavicle, which usually lies in close proximity to the pars acromialis of the scapula, and occassionally may fuse to it.
sulcus pro cartilagine praecoracoidealis
Canal on the posterior aspect of the clavicle that accomodates the anterior margin of the procoracoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Canal on the posterior aspect of the clavicle that accomodates the anterior margin of the procoracoid cartilage.
glenoid head of coracoid
Lateral end of the coracoid, which forms the medial portion of the glenoid fossa.
amphibian_anatomy_curators
intumescentia glenoidalis
uberon/phenoscape-anatomy
UBERON:3000814
intumescentia glenoidalis
AAO:LAP
Lateral end of the coracoid, which forms the medial portion of the glenoid fossa.
sternal head of coracoid
Medial end of the coracoid, which is synchondrotically fused to the epicoracoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
pars epicoracoidealis
uberon/phenoscape-anatomy
AAO:LAP
Medial end of the coracoid, which is synchondrotically fused to the epicoracoid cartilage.
UBERON:3000815
pars epicoracoidealis
margo fenestralis
Anterior margin of the coracoid, which forms the posterior edge of the pectoral fenestra.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior margin of the coracoid, which forms the posterior edge of the pectoral fenestra.
margo posterior
Posterior margin of the coracoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Posterior margin of the coracoid.
margo anterior of scapula
Anterior margin of the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Anterior margin of the scapula.
margo clavicularis
Inferior margin of the pars acromialis of the scapula, which articulates with the clavicule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Inferior margin of the pars acromialis of the scapula, which articulates with the clavicule.
margo posterior of scapula
Posterior margin of the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Posterior margin of the scapula.
margo suprascapularis
Superior margin of the scapula, which articulates with the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Superior margin of the scapula, which articulates with the suprascapula.
pars suprascapularis
Superior portion of the scapula, which is thinner than the rest of the shaft.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Superior portion of the scapula, which is thinner than the rest of the shaft.
sinus interglenoidalis
Notch or indentation between the pars glenoidalis and pars acromialis of the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Notch or indentation between the pars glenoidalis and pars acromialis of the scapula.
tenuitas cristaeformis
Leading (anterior) portion of the scapula, which is thinner than the rest of the shaft.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Leading (anterior) portion of the scapula, which is thinner than the rest of the shaft.
crista longitudinalis scapula
Longitudinal ridge on the medial (inner) face of the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Longitudinal ridge on the medial (inner) face of the scapula.
true
margo anterior of cleithrum
Anterior margin of the anterior ramus of the cleithrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Anterior margin of the anterior ramus of the cleithrum.
margo posterior of cleithrum
Posterior margin of the posterior ramus of the cleithrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Posterior margin of the posterior ramus of the cleithrum.
true
margo scapularis
Lateral margin of the suprascapula, which articulates with the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Lateral margin of the suprascapula, which articulates with the scapula.
true
true
margo vertebralis
Medial margin of the suprascapula, which lies dorsal to the vertebral column.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Medial margin of the suprascapula, which lies dorsal to the vertebral column.
spina acromioidea
Small process of the lamina recurvata that extends laterally toward the scapular-suprascapular articulation.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small process of the lamina recurvata that extends laterally toward the scapular-suprascapular articulation.
true
true
true
anterior lamina recurvata
Portion of the anterior ramus of the cleithrum that invest the anterior margin of the suprascapula, extending onto its dorsal surface.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:LAP
Portion of the anterior ramus of the cleithrum that invest the anterior margin of the suprascapula, extending onto its dorsal surface.
sinus dorsalis
Notch or indentation between the anterior and posterior rami of the cleithrum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Notch or indentation between the anterior and posterior rami of the cleithrum.
posterior lamina recurvata
Portion of the posterior ramus of the cleithrum that invests the posterior margin of the suprascapula, extending onto its dorsal surface.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Portion of the posterior ramus of the cleithrum that invests the posterior margin of the suprascapula, extending onto its dorsal surface.
true
true
true
crista lateralis humeri
Ridge on the lateral aspect of the humeral shaft located just anterior to the radial (lateral) epicondyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Ridge on the lateral aspect of the humeral shaft located just anterior to the radial (lateral) epicondyle.
true
true
crista medialis humeri
Ridge on the medial aspect of the humeral shaft that extends from the level of the middle portion of the shaft to ulnar (medial) epicondyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Ridge on the medial aspect of the humeral shaft that extends from the level of the middle portion of the shaft to ulnar (medial) epicondyle.
true
true
crista radii
Small ridge on the lateral aspect of the radial shaft, located at the level of the collum antibrachii.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Small ridge on the lateral aspect of the radial shaft, located at the level of the collum antibrachii.
capitulum of radius
Lateral portion of the proximal (upper) articular surface of the radius that consists of an eminence with a rounded apex.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Lateral portion of the proximal (upper) articular surface of the radius that consists of an eminence with a rounded apex.
obsolete capitulum radii
Small eminence on the distal articular head of the radius.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:LAP
Small eminence on the distal articular head of the radius.
capitulum ulnae
Small eminence on the distal articular head of the ulna.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Small eminence on the distal articular head of the ulna.
sulcus longitudinalis
In a fused radio-ulna, longitudinal furrow that demarcates the area of fusion of both elements. This sulcus is deep in the distal portion of the compound bone, but barely evident or absent at the proximal end.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
In a fused radio-ulna, longitudinal furrow that demarcates the area of fusion of both elements. This sulcus is deep in the distal portion of the compound bone, but barely evident or absent at the proximal end.
true
element Y of fore mesopodium
Oval carpal element that is located on the anteromedial side of the radiale and the anterolateral side of the ulnare. Anteriorly, it articulates with carpals 1 through 4 (or 2 through 5 according to some authors). It is also recognized as centrale by some authors. This element originates from one, two, or three condensation centers. Occasionally it may fuse to carpal 2(1), carpal 3(2), the ulnare, or other elements.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Oval carpal element that is located on the anteromedial side of the radiale and the anterolateral side of the ulnare. Anteriorly, it articulates with carpals 1 through 4 (or 2 through 5 according to some authors). It is also recognized as centrale by some authors. This element originates from one, two, or three condensation centers. Occasionally it may fuse to carpal 2(1), carpal 3(2), the ulnare, or other elements.
true
intercalary element of fore digit
Small elements present in all digits of the manus, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Small elements present in all digits of the manus, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally.
foramen perforans carpi
Opening for the passage of the perforans carpi artery from the ventral to the dorsal side. It perforates the compound ulnare + intermedium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Opening for the passage of the perforans carpi artery from the ventral to the dorsal side. It perforates the compound ulnare + intermedium.
pubo-ischium
Composite element formed by the fusion of the ischium and pubis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Composite element formed by the fusion of the ischium and pubis.
epileon
Dorsal extremity of the ilial shaft, which remains cartilaginous.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Dorsal extremity of the ilial shaft, which remains cartilaginous.
true
agger limitans anterior of ilium
Shelf-like expansion of the ilial corpus that forms the anterior border of the acetabulum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Shelf-like expansion of the ilial corpus that forms the anterior border of the acetabulum.
agger limitans anterior of ischium
Shelf-like expansion of the ischium that forms the posterior border of the acetabulum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Shelf-like expansion of the ischium that forms the posterior border of the acetabulum.
true
obsolete supra-acetabular expansion
Dorsal portion of the ilial corpus, located above the acetabulum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
dorsal acetabular expansion
pars ascendens ilei
true
uberon/phenoscape-anatomy
UBERON:3000868
pars ascendens ilei
AAO:LAP
Dorsal portion of the ilial corpus, located above the acetabulum.
UBERON:3000868
dorsal acetabular expansion
ilial protuberance
Small, dorsolaterally projecting knob located just anterior to the supra-acetabular expansion and about the level of the anterior border of the acetabulum.
amphibian_anatomy_curators
dorsal protuberance
tuber superior
uberon/phenoscape-anatomy
AAO:LAP
Small, dorsolaterally projecting knob located just anterior to the supra-acetabular expansion and about the level of the anterior border of the acetabulum.
UBERON:3000869
dorsal protuberance
UBERON:3000869
tuber superior
true
true
preacetabular expansion
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral portion of the ilial corpus, located anteroventral to the acetabulum.
amphibian_anatomy_curators
pars descendens ilei
uberon/phenoscape-anatomy
ventral acetabular expansion
true
UBERON:3000870
pars descendens ilei
AAO:LAP
Ventral portion of the ilial corpus, located anteroventral to the acetabulum.
UBERON:3000870
ventral acetabular expansion
fossula tuberis superioris
Small depression dorsal to the proximal portion of the collum ilei and ventral to the ilial protuberance.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small depression dorsal to the proximal portion of the collum ilei and ventral to the ilial protuberance.
collum ilei
Cyllindrical pillar that originates anterior to the acetabulum and extends to the ilial shaft.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Cyllindrical pillar that originates anterior to the acetabulum and extends to the ilial shaft.
pars cylindriformis ilei
Elongate, cylindrical structure on the ventral side of the shaft of the ilium that extends through its entire length.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Elongate, cylindrical structure on the ventral side of the shaft of the ilium that extends through its entire length.
true
crista ischii
Crest on the posterior side of the ischium, which may also extend to the posteroventral aspect of pubis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Crest on the posterior side of the ischium, which may also extend to the posteroventral aspect of pubis.
spina pelvis posterior
Small, rounded process on the anterodorsal margin of the ischium, just posterior to the area of articulation with the ilium.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Small, rounded process on the anterodorsal margin of the ischium, just posterior to the area of articulation with the ilium.
spina pelvis anterior
Small, rounded process on the anteroventral margin of the preacetabular expansion of the ilial corpus.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small, rounded process on the anteroventral margin of the preacetabular expansion of the ilial corpus.
true
intumescentia bilateralis inferior
Small protuberance on the ischium, located close to its posteroventral margin.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small protuberance on the ischium, located close to its posteroventral margin.
intumescentia bilateralis superior
Small protuberance on the ischium, located at the level of the superior margin of the acetabulum and close to its posterior margin.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Small protuberance on the ischium, located at the level of the superior margin of the acetabulum and close to its posterior margin.
true
true
incisura terminalis
Small indentation on the posterior margin of the ischium, ventral to the intumescentia bilateralis superior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small indentation on the posterior margin of the ischium, ventral to the intumescentia bilateralis superior.
crista hypertrophica ischium
Large protuberance on the dorsal aspect of the ischium that extends from the ischio-ilium articulation to the spina pelvis posterior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Large protuberance on the dorsal aspect of the ischium that extends from the ischio-ilium articulation to the spina pelvis posterior.
true
interilial region
Area of convergence of the ilial shafts. When the preacetabular ilium is narrow, the interilial configuration is V-shaped or narrowly rounded, whereas when the interilial region is broadly expanded the interilial configuration is U-shaped.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Area of convergence of the ilial shafts. When the preacetabular ilium is narrow, the interilial configuration is V-shaped or narrowly rounded, whereas when the interilial region is broadly expanded the interilial configuration is U-shaped.
recessus coccygealis
Area dorsal to the pelvic girdle symphysis, between the dorsal portions of the ilial corpora, where lies the posterior terminus of the urostyle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Area dorsal to the pelvic girdle symphysis, between the dorsal portions of the ilial corpora, where lies the posterior terminus of the urostyle.
true
epipubis
Small prepubic element formed by a plate of cartilage (which may calcify in the adult) that is synchondrotically united with the pubis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small prepubic element formed by a plate of cartilage (which may calcify in the adult) that is synchondrotically united with the pubis.
obsolete Nobelian bone
Paired cartilaginous rods that lie within the copulatory organ (or so-called tail) and are attached to the posteroventral part of the pelvic girdle.
amphibian_anatomy_curators
postpubis
true
uberon/phenoscape-anatomy
UBERON:3010240
AAO:LAP
Paired cartilaginous rods that lie within the copulatory organ (or so-called tail) and are attached to the posteroventral part of the pelvic girdle.
ypsiloid cartilage
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Y-shaped cartilage lying in the middle line, anterior to the pubo-ischium with which it articulates. It lies dorsal to the rectus abdominis muscle with which it articulates.
abdominal sternum
amphibian_anatomy_curators
cartilago epipubes
cartilago marsupial
cartilago ypsiloidea
cartilago ypsiloides
uberon/phenoscape-anatomy
AAO:LAP
Y-shaped cartilage lying in the middle line, anterior to the pubo-ischium with which it articulates. It lies dorsal to the rectus abdominis muscle with which it articulates.
UBERON:3000886
cartilago epipubes
true
UBERON:3000886
cartilago ypsiloides
UBERON:3000886
cartilago ypsiloidea
UBERON:3000886
abdominal sternum
UBERON:3000886
cartilago marsupial
femoral ridge
Low crest that arises just behind the acetabular head and extends distally for about one-third the length of the femoral shaft.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
crista femoris
uberon/phenoscape-anatomy
AAO:LAP
Low crest that arises just behind the acetabular head and extends distally for about one-third the length of the femoral shaft.
true
true
UBERON:3000894
crista femoris
obsolete trochlear groove of femur
Canal on the posteroventral surface of the femoral head, which articulates with the ischial process on the rim of the acetabulum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:LAP
Canal on the posteroventral surface of the femoral head, which articulates with the ischial process on the rim of the acetabulum.
foveal depression
Ovoid roughened pit situated on the dorsal and anteroventral surface of the acetabular head wherein the ligaments attaching the bone to the acetabulum are inserted.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Ovoid roughened pit situated on the dorsal and anteroventral surface of the acetabular head wherein the ligaments attaching the bone to the acetabulum are inserted.
trochanteric crest
Paired ridges on the ventral surface of the femoral shaft that run toward the femoral trochanter; the posterior crest is less developed.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Paired ridges on the ventral surface of the femoral shaft that run toward the femoral trochanter; the posterior crest is less developed.
true
true
tibial crest
Ridge that arises from the dorso-masial side of the extensor surface of the tibia. It receives the insertion of the tendon of the extensor ilio-tibialis muscle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:LAP
Ridge that arises from the dorso-masial side of the extensor surface of the tibia. It receives the insertion of the tendon of the extensor ilio-tibialis muscle.
apophysis distalis of tibiofibula
Swelling on the extensor surface of the distal head of the tibiofibula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Swelling on the extensor surface of the distal head of the tibiofibula.
caput ossis cruris
Proximal head of the tibiofibula that articulates with the distal head of the femur.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Proximal head of the tibiofibula that articulates with the distal head of the femur.
sulcus pro musculo extensori cruris brevis
Small canal on the proximal head of to the tibiofibula, lateral to the apophysis distalis, for the insertion of the cruris brevis muscle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Small canal on the proximal head of to the tibiofibula, lateral to the apophysis distalis, for the insertion of the cruris brevis muscle.
true
eminentia arcuata
Small crest on the extensor surface of the proximal head of the tibiofibula (tibial side).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Small crest on the extensor surface of the proximal head of the tibiofibula (tibial side).
true
sulcus distalis ossis cruris
In a fused tibiofibula, longitudinal furrow in the distal portion of the compound bone that demarcates the area of fusion of both elements.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
In a fused tibiofibula, longitudinal furrow in the distal portion of the compound bone that demarcates the area of fusion of both elements.
true
sulcus proximalis ossis cruris
In a fused tibiofibula, longitudinal furrow in the proximal portion of the compound bone that demarcates the area of fusion of both elements.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
In a fused tibiofibula, longitudinal furrow in the proximal portion of the compound bone that demarcates the area of fusion of both elements.
true
obsolete hind limb opening
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
foramen nutritium exterius
Foramen for the tibial artery and vein and the deep peroneal nerve; it pierces through the midpoint of the shaft of the tibiofibula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Foramen for the tibial artery and vein and the deep peroneal nerve; it pierces through the midpoint of the shaft of the tibiofibula.
true
spatium intertarsale
Separation of the tibiale and fibulare along their longitudinal axia.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Separation of the tibiale and fibulare along their longitudinal axia.
apophysis proximalis
Swelling on the extensor surface of the proximal compound head of the tibiale and fibulare.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Swelling on the extensor surface of the proximal compound head of the tibiale and fibulare.
apophysis distalis of tibiale fibulare
Swelling on the extensor surface of the distal compound head of the tibiale and fibulare.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Swelling on the extensor surface of the distal compound head of the tibiale and fibulare.
true
element Y of hind mesopodium
Oval tarsal element that is located on the anteromedial side of the tibiale. Anteriorly, it articulates with the proximal prehallux, tarsals 1, 2, and 3.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Oval tarsal element that is located on the anteromedial side of the tibiale. Anteriorly, it articulates with the proximal prehallux, tarsals 1, 2, and 3.
prehallux skeleton
One to three or four elements located ventral and medial to the metatarsal of digit I. When more than one elements are present, they are smaller than the proximal prehallux.
This class was sourced from an external ontology (amphibian_anatomy). It was modified by cjm in the following way: the class was relabeled from "prepollex" to "prepollex skeleton", to distinguish it from the digit-like structure which it is a part of. It was re-classified from "bone" to "subdivision of skeleton", as it may in fact be composed of multiple individual bones. TODO: definition needs reviewed, and it still requires placement under the UBERON:0012136 ! prehallux
amphibian_anatomy_curators
uberon/phenoscape-anatomy
prehallux
true
AAO:LAP
One to three or four elements located ventral and medial to the metatarsal of digit I. When more than one elements are present, they are smaller than the proximal prehallux.
true
intercalary element of hind digit
Small elements present in all digits of the pes, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Small elements present in all digits of the pes, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally.
foramen perforans tarsi
Small opening between the centrale and fibulare that allows the perforans tarsi artery to pass from the ventral to the dorsal side of the ankle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:LAP
Small opening between the centrale and fibulare that allows the perforans tarsi artery to pass from the ventral to the dorsal side of the ankle.
obsolete scapular area
Dorso-lateral portion of the pectoral girdle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
pars scapularis
scapula et adscapulum
scapula-suprascapula area
scapulum et episcapulum
true
uberon/phenoscape-anatomy
AAO:LAP
Dorso-lateral portion of the pectoral girdle.
UBERON:3000935
scapula et adscapulum
UBERON:3000935
pars scapularis
UBERON:3000935
scapula-suprascapula area
UBERON:3000935
scapulum et episcapulum
zonal element
All those parts of the pectoral girdle in the central region of the zonal area.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
All those parts of the pectoral girdle in the central region of the zonal area.
prezonal element
All those parts of the pectoral girdle that lie anterior to the zonal area.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
All those parts of the pectoral girdle that lie anterior to the zonal area.
postzonal element
All those parts of the pectoral girdle that lies posterior to the zonal area.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
All those parts of the pectoral girdle that lies posterior to the zonal area.
arciferal girdle
Pectoral girdle in which the epicoracoid cartilages are elaborated into posteriorly directed epicoracoid horns. Most arciferal pectoral girdles are characterized by fusion of the epicoracoid cartilages in the interclavicle region. Posterior to the clavicles, the epicoracoids usually are free and overlapping.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Pectoral girdle in which the epicoracoid cartilages are elaborated into posteriorly directed epicoracoid horns. Most arciferal pectoral girdles are characterized by fusion of the epicoracoid cartilages in the interclavicle region. Posterior to the clavicles, the epicoracoids usually are free and overlapping.
firmisternal girdle
Pectoral girdle that lacks epicoracoid horns. The sternum is fused to the pectoral arch, and the epicoracoid cartilages of each half of the girdle are fused to one another. The midzonal length of the girdle is shorter than that of an arciferal girdle, but pre- and postzonal elements tend to be longer.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Pectoral girdle that lacks epicoracoid horns. The sternum is fused to the pectoral arch, and the epicoracoid cartilages of each half of the girdle are fused to one another. The midzonal length of the girdle is shorter than that of an arciferal girdle, but pre- and postzonal elements tend to be longer.
pseudofirmisternal girdle
Modified arciferal pectoral girdle in which the fusion of the epicoracoid cartilages in the interclavicle region is extended posteriorly. Thus, the cartilages no longer overlap freely, and functionally a partially firmisternal condition is created.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Modified arciferal pectoral girdle in which the fusion of the epicoracoid cartilages in the interclavicle region is extended posteriorly. Thus, the cartilages no longer overlap freely, and functionally a partially firmisternal condition is created.
pseudoarciferal girdle
Modified firmisternal pectoral girdle in which the epicoracoid cartilages are partly free and overlapping; however, the epicoracoids are fused to one another and the sternum postermodially.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Modified firmisternal pectoral girdle in which the epicoracoid cartilages are partly free and overlapping; however, the epicoracoids are fused to one another and the sternum postermodially.
inscriptional rib
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Three pairs of cartilaginous elements posterior to the sternum that lie in the myosepta of the ventral trunk musculature.
abdominal ribs
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Three pairs of cartilaginous elements posterior to the sternum that lie in the myosepta of the ventral trunk musculature.
UBERON:3000945
abdominal ribs
articular process
Paired processes located on the anterior end of the cricoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
processus articularis anterior
uberon/phenoscape-anatomy
AAO:LAP
Paired processes located on the anterior end of the cricoid cartilage.
true
UBERON:3000948
processus articularis anterior
true
true
posterior ramus of cleithrum
Laminar subdivision of the cleithrum that extends along the ventral (lateral) midbody of the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Laminar subdivision of the cleithrum that extends along the ventral (lateral) midbody of the suprascapula.
true
true
true
os triangulare
Small, broadly triangular bar of bone lying across the ventral side of the pharynx at the junction of the M. genio-hyoideus and the M. rectus cervicis superficialis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
basi-branchial II
os thyroideum
os triquetum
sternum
uberon/phenoscape-anatomy
urohyal
UBERON:3000950
basi-branchial II
true
UBERON:3000950
urohyal
AAO:Francis_1934
Small, broadly triangular bar of bone lying across the ventral side of the pharynx at the junction of the M. genio-hyoideus and the M. rectus cervicis superficialis.
UBERON:3000950
sternum
UBERON:3000950
os triquetum
UBERON:3000950
os thyroideum
anterior radial
Paired, horn-like processes of basibranchial I that protrude in an antero-dorso-lateral direction, being more or less embedded in the tongue musculature. These elements contitute the hypohyals.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:Francis_1934
Paired, horn-like processes of basibranchial I that protrude in an antero-dorso-lateral direction, being more or less embedded in the tongue musculature. These elements contitute the hypohyals.
posterior radial
Paired, horn-like processes of basibranchial I that protrude in an antero-dorso-lateral direction, being more or less embedded in the tongue musculature. They arise secondarily during metamorphosis, and are therefore not strictly part of the visceral skeleton.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Francis_1934
Paired, horn-like processes of basibranchial I that protrude in an antero-dorso-lateral direction, being more or less embedded in the tongue musculature. They arise secondarily during metamorphosis, and are therefore not strictly part of the visceral skeleton.
true
ceratobranchials II--IV
Paired bars that articulate with hypobranchial II. Reduction of loss of these elements is common in salamanders.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
epibranchials
uberon/phenoscape-anatomy
AAO:LAP
Paired bars that articulate with hypobranchial II. Reduction of loss of these elements is common in salamanders.
true
UBERON:3000953
epibranchials
hypobranchial I
Paired bar that articulates with basibranchial I. It forms the anterior portion of the posterior cornu of the hyoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Francis_1934
Paired bar that articulates with basibranchial I. It forms the anterior portion of the posterior cornu of the hyoid.
true
ceratobranchial I
Paired bar that articulates with, or is fused to, hypobranchial I. It forms the posterior portion of the posterior cornu of the hyoid.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
epibranchial
uberon/phenoscape-anatomy
UBERON:3000955
epibranchial
AAO:Francis_1934
Paired bar that articulates with, or is fused to, hypobranchial I. It forms the posterior portion of the posterior cornu of the hyoid.
true
hypobranchial II
Paired bar that articulates anteriorly with basibranchial I and posteriorly with ceratobranchials II--IV.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:Duellman_and_Trueb_1994
Paired bar that articulates anteriorly with basibranchial I and posteriorly with ceratobranchials II--IV.
true
basihyal
Paired, anterior element that articulates medially with basibranchial I and posterolaterally with the paired hypohyals.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:LAP
Paired, anterior element that articulates medially with basibranchial I and posterolaterally with the paired hypohyals.
true
external integument structure
Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument.
basale commune (carpal)
Amalgamation of distal carpals 1 and 2.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Amalgamation of distal carpals 1 and 2.
angulosplenial
Dermal bone of anuran lower jaw investing lingual and ventral surfaces of Meckel's cartilage; forming coronoid process and articulating with palatoquadrate posteriorly.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
angular
goniale
uberon/phenoscape-anatomy
true
true
UBERON:3000966
angular
UBERON:3000966
goniale
AAO:EJS
Dermal bone of anuran lower jaw investing lingual and ventral surfaces of Meckel's cartilage; forming coronoid process and articulating with palatoquadrate posteriorly.
obsolete larval skeletal system
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
redundant with stage+skeletal system. Can be properly reinstated if needed.
true
uberon/phenoscape-anatomy
head external integument structure
Dermal, epidermal, glandular and pigment structures of the external head integument.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Dermal, epidermal, glandular and pigment structures of the external head integument.
body external integument structure
Dermal, epidermal, glandular and pigment structures of the body integument.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Dermal, epidermal, glandular and pigment structures of the body integument.
limb external integument structure
Dermal, epidermal, glandular and pigment structures of the limb integument.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Dermal, epidermal, glandular and pigment structures of the limb integument.
tail external integument structure
Dermal, epidermal, glandular and pigment structures of the tail integument.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Dermal, epidermal, glandular and pigment structures of the tail integument.
pectoral fold
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
dorsal folds
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
obsolete principal cavity
The largest part of the nasal cavity, containing the olfactory epithelium.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:EJS
The largest part of the nasal cavity, containing the olfactory epithelium.
otic and occipital
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
longitudinal dorsal folds
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
transversal dorsal folds
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
suprarostral cartilage
Larval upper jaws articulate with trabecular horns.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:EJS
Larval upper jaws articulate with trabecular horns.
dorsal pouch
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
obsolete palatoquadrate and suspensorium
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete lateral line receptor organ
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
basale commune (tarsal)
Amalgamation of distal tarsals 1 and 2.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Amalgamation of distal tarsals 1 and 2.
cloacal fold
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
dorsolateral fold
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
body granules
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
body wart
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
body spicule
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
body tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
obsolete muscular process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
dorsal skin texture
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
pit organ
Mechanoreceptive organ of the lateral line, smaller than neuromasts, they are located on the surface of the epidermis. These receptors receive afferent and efferent innervation.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010823
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Mechanoreceptive organ of the lateral line, smaller than neuromasts, they are located on the surface of the epidermis. These receptors receive afferent and efferent innervation.
ventral skin texture
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
axillary glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
larval chondrocranium
Cartilaginous larval skull.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cartilaginous larval skull.
inguinal glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. glutaeus magnus
Originates from the superior process of the ilium and inserts on the aponeuronis of the M. cruralis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the superior process of the ilium and inserts on the aponeuronis of the M. cruralis.
dorsal glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. tensor fasciae latae
Originates on the ventro-lateral aspect of the ala ossis ilei and the ventral surface of the iliacus externus. Inserts on the lateral surface of the cruralis, the dorso-lateral surface of the gluteus magnus, and on the aponeurosis of the cruralis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ventro-lateral aspect of the ala ossis ilei and the ventral surface of the iliacus externus. Inserts on the lateral surface of the cruralis, the dorso-lateral surface of the gluteus magnus, and on the aponeurosis of the cruralis.
M. sartorius
Originates on the ventral pelvic rim, the pubic region, and the ventral surface of the adductor longus. The insertion bifurcates distally; the ventral portion attaches to the aponeurosis of the cruralis and the dorsal part attaches to the distal attachment of the gracilis major, the semitendinosus, and to the aponeurosis of the cruralis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ventral pelvic rim, the pubic region, and the ventral surface of the adductor longus. The insertion bifurcates distally; the ventral portion attaches to the aponeurosis of the cruralis and the dorsal part attaches to the distal attachment of the gracilis major, the semitendinosus, and to the aponeurosis of the cruralis.
gonochoristic organism
CARO:0000048
Multi-cellular organism that has male and female sexes.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Multi-cellular organism that has male and female sexes.
gonochoristic organism
CARO:0000048
ventral glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. semitendinosus
Originates by two tendons: one on the postero-ventral aspect of the pelvic rim, the other, a dorsal tendon from the postero-dorsal pelvic rim under the ventral edge of M. semimembranosus. Inserts on the ventral surface of the tibiofibula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates by two tendons: one on the postero-ventral aspect of the pelvic rim, the other, a dorsal tendon from the postero-dorsal pelvic rim under the ventral edge of M. semimembranosus. Inserts on the ventral surface of the tibiofibula.
protandrous hermaphroditic organism
Sequential hermaphroditic organism that produces gametes first of the male sex, and then later of the female sex.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Sequential hermaphroditic organism that produces gametes first of the male sex, and then later of the female sex.
protogynous hermaphroditic organism
Sequential hermaphroditic organism that produces gametes first of the female sex, and then later of the male sex.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Sequential hermaphroditic organism that produces gametes first of the female sex, and then later of the male sex.
dorsal crest
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
centrale 1
Distal-most centrale when two are present.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Distal-most centrale when two are present.
true
M. quadratus femoris
Originates on the ventro-lateral border of the ischium and inserts on the ventro-medial surface of the femur at the base of caput femoris.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ventro-lateral border of the ischium and inserts on the ventro-medial surface of the femur at the base of caput femoris.
M. gemellus
Originates from the dorso-lateral margin of the ischium and inserts on the medial surface of the femur.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the dorso-lateral margin of the ischium and inserts on the medial surface of the femur.
annuli
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
centrale (fore)
Rectangular cartilage or bone between the distal basal commune and the proximal intermedium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Rectangular cartilage or bone between the distal basal commune and the proximal intermedium.
anterior quadratocranial commissure
Cartilage that bridges palatoquadrate to ethmoid region.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:EJS
Cartilage that bridges palatoquadrate to ethmoid region.
true
true
M. gracilis major
Originates by a broad tendon from the postero-ventral surface of the pelvic rim and inserts by two tendons. One broad tendon inserts on the knee aponeurosis, and in part on the ventro-medial surface of the tibiofibula. The other long tendon inserts on the posterior surface of the tibiofibula just below the proximal head.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates by a broad tendon from the postero-ventral surface of the pelvic rim and inserts by two tendons. One broad tendon inserts on the knee aponeurosis, and in part on the ventro-medial surface of the tibiofibula. The other long tendon inserts on the posterior surface of the tibiofibula just below the proximal head.
M. gracilis minor
Originates from the pelvic rim just ventral to the anus and merges with M. gracilis major. M. gracilis minor also attaches to the skin.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the pelvic rim just ventral to the anus and merges with M. gracilis major. M. gracilis minor also attaches to the skin.
M. semimembranosus
Originates on the ventro-lateral surface of the ischium below the anus and inserts on the ventro-medial aspect of the femur and the head of the tibiofibula by a stout tendon, which is formed by the ventral origin of the plantaris longus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ventro-lateral surface of the ischium below the anus and inserts on the ventro-medial aspect of the femur and the head of the tibiofibula by a stout tendon, which is formed by the ventral origin of the plantaris longus.
intermedium (fore)
Quadrangular cartilage or bone lying between the preaxial radiale and the postaxial ulnare in the proximal level of the mesopodium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Quadrangular cartilage or bone lying between the preaxial radiale and the postaxial ulnare in the proximal level of the mesopodium.
true
M. ileo-fibularis
Originates from the ventral border of the ala ossis ilei just posterior to the origin of M. glutaeus maximus. Insterts in the aponeurosis covering the knee joint.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the ventral border of the ala ossis ilei just posterior to the origin of M. glutaeus maximus. Insterts in the aponeurosis covering the knee joint.
cranial crest
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. pyriformis
Originates on the dorso-lateral border of the distal urostyle and inserts on the dorsal surface of the crista femoris. This muscle inserts between the M. ilio-fibularis/M. glutaeus magnus and M. semimembranosus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the dorso-lateral border of the distal urostyle and inserts on the dorsal surface of the crista femoris. This muscle inserts between the M. ilio-fibularis/M. glutaeus magnus and M. semimembranosus.
centrale 2
The proximal-most rectangular cartilage or bone when two centralelia are present.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
The proximal-most rectangular cartilage or bone when two centralelia are present.
M. ileo-femoralis
Originates from the postero-ventral surface of the ala ossis ilei and from the insertion tendon of M. ileo-fibularis. Inserts along the dorso-medial border of the femur.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the postero-ventral surface of the ala ossis ilei and from the insertion tendon of M. ileo-fibularis. Inserts along the dorso-medial border of the femur.
tympanic fold
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. iliacus internus
Muscle originates on the ventral border of the ala ossis ilei to insert on the dorso-medial surface of the femur.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Muscle originates on the ventral border of the ala ossis ilei to insert on the dorso-medial surface of the femur.
M. iliacus externus
Originates on the ventral and lateral surfaces of the ala ossis ilei and inserts on the postero-dorsal face of the caput femoris.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ventral and lateral surfaces of the ala ossis ilei and inserts on the postero-dorsal face of the caput femoris.
upper eyelid protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
snout protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
interorbital fold
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. pulmonum proprius
Originates along the connective tissue covering the dorsal surface of the lung and inserts on the dorsal surface of the femur. Muscle found only in Pipa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates along the connective tissue covering the dorsal surface of the lung and inserts on the dorsal surface of the femur. Muscle found only in Pipa.
M. tibialis posticus
Originates on the entire medial surface of the shaft of the tibiofibula. Inserts on the tibiale by a long tendon proximo-lateral to the insertion of the medial belly of M. tibialis anticus longus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the entire medial surface of the shaft of the tibiofibula. Inserts on the tibiale by a long tendon proximo-lateral to the insertion of the medial belly of M. tibialis anticus longus.
postrictal protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. tibialis anticus longus
Originates on the ventro-lateral surface of the medial condyle of the femur. Its tendon extends in a groove over the knee in the lateral surface of the tibiofibular head, and penetrates the M. peroneus tendon. Insertion is by a lateral and medial head on the dorso-lateral surface of the fibulare and the medial border of the proximal end of the tibiale respectively.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ventro-lateral surface of the medial condyle of the femur. Its tendon extends in a groove over the knee in the lateral surface of the tibiofibular head, and penetrates the M. peroneus tendon. Insertion is by a lateral and medial head on the dorso-lateral surface of the fibulare and the medial border of the proximal end of the tibiale respectively.
M. extensor cruris brevis
Originates by a slender tendon from the ventral surface of the medial condyle of the femur and passes over the knee to insert as a fleshy belly on the ventro-lateral surface of the tibiofibula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates by a slender tendon from the ventral surface of the medial condyle of the femur and passes over the knee to insert as a fleshy belly on the ventro-lateral surface of the tibiofibula.
M. tibialis anticus brevis
Originates from the dorso-lateral surface of the tibiofibula and inserts on the proximo-medial surface of the tibiale dorsal to the medial head of M. tibialis anticus longus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the dorso-lateral surface of the tibiofibula and inserts on the proximo-medial surface of the tibiale dorsal to the medial head of M. tibialis anticus longus.
upper lip protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
basitrabecular process
A process of the otic capsule that will bridge to the palatoquadrate basal process.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A process of the otic capsule that will bridge to the palatoquadrate basal process.
AAO:EJS
true
true
villosities
Small hair or nipple like projection on the integument.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
R. C. Stebbins 1951
Small hair or nipple like projection on the integument.
quadratoethmoid process
Process that projects from anterior margin of commissure as site of attachment for quadratoethmoid ligament.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Process that projects from anterior margin of commissure as site of attachment for quadratoethmoid ligament.
true
true
true
vocal sac
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. tarsalis posticus
Originates on the medial border of the ligamentum calcanei and inserts along the ventral surface of the tibiale.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the medial border of the ligamentum calcanei and inserts along the ventral surface of the tibiale.
M. plantaris profundus
Originates on the medial half of the ligamentum calcanei and inserts along the dorsal surface of the aponeurosis plantaris and extends to the level of the base of the prehallux.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the medial half of the ligamentum calcanei and inserts along the dorsal surface of the aponeurosis plantaris and extends to the level of the base of the prehallux.
musculus rectus superior
Cranial nerve III innervated; dorsal in the rectus group.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cranial nerve III innervated; dorsal in the rectus group.
mental glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
musculus rectus inferior
Cranial nerve III innervated; ventral in the rectus group.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cranial nerve III innervated; ventral in the rectus group.
vocal sac glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
pectoral glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
anterodorsal lateral line nerve (ADLLN)
Sensory nerve of the anterior lateral line component. It develops from the preotic anterodorsal placode. ADLLN branches into two rami innervating orbital lines of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
Sensory nerve of the anterior lateral line component. It develops from the preotic anterodorsal placode. ADLLN branches into two rami innervating orbital lines of neuromasts.
tympanic papilla
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
anteroventral lateral line nerve (AVLLN)
Sensory nerve of the anterior lateral line component. It develops from preotic anteroventral placode. AVLLN innervates lower jaw lines of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Sensory nerve of the anterior lateral line component. It develops from preotic anteroventral placode. AVLLN innervates lower jaw lines of neuromasts.
musculus rectus medialis
Cranial nerve III innervated; medial in the rectus group.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cranial nerve III innervated; medial in the rectus group.
posterior lateral line nerve (PLLN)
Sensory nerve of the posterior lateral line component. It develops from de postotic posterior placode. PLLN innervates the trunk lines of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Sensory nerve of the posterior lateral line component. It develops from de postotic posterior placode. PLLN innervates the trunk lines of neuromasts.
lower eyelid texture
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
musculus obliquus inferior
Cranial nerve III innverated; ventral in the obliquus group.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cranial nerve III innverated; ventral in the obliquus group.
quadrato-orbital commissure
Cartilage that bridges palatoquadrate muscular process to dorsal orbitonasal plate.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cartilage that bridges palatoquadrate muscular process to dorsal orbitonasal plate.
true
finger fringes
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
toe fringes
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
musculus levator bulbi
Cranial nerve V innervated; ventral to the eye.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cranial nerve V innervated; ventral to the eye.
middle lateral line nerve (MLLN)
Sensory nerve of the posterior lateral line component. It develops from the postotic middle placode. MLLN innervates neuromasts located over the otic capsule and the suprabranchial line of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Sensory nerve of the posterior lateral line component. It develops from the postotic middle placode. MLLN innervates neuromasts located over the otic capsule and the suprabranchial line of neuromasts.
fringe on postaxial edge of Finger IV
Kok & Castroviejo-Fisher (2008) Zootaxa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
taeniae tecti marginalis
Compose lateral rim of frontoparietal fenestra, ventrally confluent with orbital cartilages, posteriorly confluent with tectum synoticum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Compose lateral rim of frontoparietal fenestra, ventrally confluent with orbital cartilages, posteriorly confluent with tectum synoticum.
taenia tecti transversalis
Cartilaginous connection that partitions frontoparietal fenestra into anterior and posterior regions. Often persists form larva into adults.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Cartilaginous connection that partitions frontoparietal fenestra into anterior and posterior regions. Often persists form larva into adults.
true
orbital cartilages
Forms lateral walls of braincase, confluent posteriorly with otic capsules via taenia tecti marginalis and anteriorly with lamina orbitonasalis via sphenethmoid commissure.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Forms lateral walls of braincase, confluent posteriorly with otic capsules via taenia tecti marginalis and anteriorly with lamina orbitonasalis via sphenethmoid commissure.
true
taenia tecti medialis
Cartilaginous connection between the taenia tecti transversalis to the tectum synoticum, and subdividing the parietal fenestra into left and right fenestrae. Often persist from larva to adult.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
M. cruralis
Originates from the anterior surface of the hip joint capsule between the iliacus internus and the pectineus. Inserts by an aponeurosis attaching to the condyles of the femur and on the head of the cruris. This continues over the cruris to cover the tibialis anticus longus and peroneus to insert on the dorsal surface of those muscles.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the anterior surface of the hip joint capsule between the iliacus internus and the pectineus. Inserts by an aponeurosis attaching to the condyles of the femur and on the head of the cruris. This continues over the cruris to cover the tibialis anticus longus and peroneus to insert on the dorsal surface of those muscles.
obsolete trabecular plate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral plate anterior to and confluent with ethmoid plate.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:EJS
Ventral plate anterior to and confluent with ethmoid plate.
trabecular horn
Anterior extensions.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
trabecular horns
uberon/phenoscape-anatomy
true
AAO:curator
Anterior extensions.
UBERON:3010138
trabecular horns
occipital arch
Posterior chondrocranium forming ventral and lateral margins of foramen magnum, medial to otic capsules.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Posterior chondrocranium forming ventral and lateral margins of foramen magnum, medial to otic capsules.
odontoids
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Toothlike processes found on the mandible of some anurans; can be formed by dentary or dentary + mentomeckelian bones; odontoids lack enamel and dentine present in true teeth.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Toothlike processes found on the mandible of some anurans; can be formed by dentary or dentary + mentomeckelian bones; odontoids lack enamel and dentine present in true teeth.
true
true
otic operculum
Plate of cartilage occluding fenestra ovalis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:EJS
Plate of cartilage occluding fenestra ovalis.
lacrimal
Investing bone associated with nasolacrimal duct and lying between pars facialis of maxilla and prefrontal and sometimes nasal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
ectethmoid
uberon/phenoscape-anatomy
AAO:EJS
Investing bone associated with nasolacrimal duct and lying between pars facialis of maxilla and prefrontal and sometimes nasal.
UBERON:3010146
ectethmoid
middle cavity
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete olfactory receptor cell
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete supporting cell
amphibian_anatomy_curators
replaced with 'olfactory epithelium support cell' due to axiom (removed) that it was part of olfactory epithelium.
true
uberon/phenoscape-anatomy
obsolete olfactory basal cell
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
Obsoleted as it had no definition or logical axiom beyond being placed as an "olfactory "epithelium", which is incorrect for a cell (should be part of). If a definition is found we can rescuscitate this class.[UBERON:cjm]
metacarpal fold
Kok & Castroviejo-Fisher (2008) Zootaxa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ulnar fold
Kok & Castroviejo-Fisher (2008) Zootaxa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
fringe on postaxial edge of Toe V
Kok & Castroviejo-Fisher (2008) Zootaxa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
metatarsal fold
Kok & Castroviejo-Fisher (2008) Zootaxa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
tarsal fringe
Kok & Castroviejo-Fisher (2008) Zootaxa.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ungual flap
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
subarticular tubercles
Is a integumentary structure located on the ventral surface of the hand and/or foot. Found at the junction between, in the hand, the metacarpal and most proximal phalanx of the digit and between phalanges, and in the foot between the metatarsal and most proximal phalanx of the digit and between phalanges.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
supernumerary tubercles
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
circumferential groove
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
nuptial pads
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
finger glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
web glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
humeral glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
tibial glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
femoral glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
inner metatarsal tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
outer metatarsal tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
inner metacarpal tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
thenar tubercle
uberon/phenoscape-anatomy
UBERON:3010187
thenar tubercle
outer metacarpal tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
palmar tubercle
uberon/phenoscape-anatomy
UBERON:3010188
palmar tubercle
ulnar protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
tibial protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
calcar anterior
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
calcar posterior
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
prepollical protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
mediale
A recurrent variant of salamanders; a rhomboidal cartilage lying immediately postaxial from the centrale or centrale 1.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
A recurrent variant of salamanders; a rhomboidal cartilage lying immediately postaxial from the centrale or centrale 1.
AAO:EJS
lateral appendix
A small lateral diverticulum of the nasal cavity found in anuran larvae.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
A small lateral diverticulum of the nasal cavity found in anuran larvae.
AAO:EJS
true
lateral recess
A part of the inferior cavity of the olfactory organ, found in anurans.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A part of the inferior cavity of the olfactory organ, found in anurans.
AAO:EJS
cutaneous vasculature
Blood vessels in skin.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Blood vessels in skin.
true
dorsal tail tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
tail base gland
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
dorsal tail fin
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ventral tail fin
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
postminimus
A rounded cartilage lying in the postaxial margin of the mesopodium, adjacent to the distal end of the fibulare.
Often consider atavistic when present in extant salamnders (Caudata)
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
A rounded cartilage lying in the postaxial margin of the mesopodium, adjacent to the distal end of the fibulare.
AAO:EJS
keratinous claw
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
carotid
Either of two arteries which carry blood to the head.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Either of two arteries which carry blood to the head.
external carotid
An artery which supplies blood to the muscles of the tongue and floor of the mouth via four major branches.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
An artery which supplies blood to the muscles of the tongue and floor of the mouth via four major branches.
internal carotid
An artery which supplies the upper jaw and cranium.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
An artery which supplies the upper jaw and cranium.
obsolete orbital region
An anatomical cluster that is part of the cranium and structurally supports the eye.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:EJS
An anatomical cluster that is part of the cranium and structurally supports the eye.
vertebral
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
postiliac glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
costal protuberances
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
costal grooves
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
costal folds
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
nuchal groove
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
subocular groove
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
Nobelian rod
Either of a pair of cartilaginous rods that support the intromittent organ of male Ascaphus, and are attached to the posteroventral part of the pelvic girdle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
Nobelian bone
Nobelian element
true
true
AAO:EJS
Either of a pair of cartilaginous rods that support the intromittent organ of male Ascaphus, and are attached to the posteroventral part of the pelvic girdle.
http://purl.obolibrary.org/obo/uberon/tracker/200
http://orcid.org/0000-0002-6601-2165
labial fold
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
nasolabial groove
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ventricular musculature
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete spermatocyte
UBERON:3010302
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
phallodeum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
Eversible phalloid portion of the cloaca that is inserted in the female's vent during copulation. Found in male Caecillians.
http://orcid.org/0000-0002-6601-2165
Eversible phalloid portion of the cloaca that is inserted in the female's vent during copulation. Found in male Caecillians.
intromittent organ (Ascaphus type)
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A tail like posterior extension of the cloaca supported by a pair of Nobelian rods
A tail like posterior extension of the cloaca supported by a pair of Nobelian rods
http://orcid.org/0000-0002-6601-2165
capitulum of radio-ulna
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
asexual organism
CARO:0000030
Multi-cellular organism that does not produce gametes.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Multi-cellular organism that does not produce gametes.
asexual organism
CARO:0000030
cell space
Anatomical space that is part of a cell.
CARO:0000062
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Anatomical space that is part of a cell.
cell space
CARO:0000062
obsolete epithelial cell
Cell which has as its part a cytoskeleton that allows for tight cell to cell contact and which has apical-basal cell polarity.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Cell which has as its part a cytoskeleton that allows for tight cell to cell contact and which has apical-basal cell polarity.
obsolete obsolete single cell organism
Cell that is an individual member of a species.
TO DO: replace with new CARO term.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Cell that is an individual member of a species.
obsolete tip
Anatomical point that is the apex of a projection or anything long and tapered; can be bony or cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Anatomical point that is the apex of a projection or anything long and tapered; can be bony or cartilage.
obsolete animal blastomere
Pigmented, smaller blastomere of the animal (upper) hemisphere of the cleaving embryo.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
micromere
true
uberon/phenoscape-anatomy
UBERON:3010283
micromere
AAO:BJB
Pigmented, smaller blastomere of the animal (upper) hemisphere of the cleaving embryo.
obsolete vegetal blastomere
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Unpigmented, larger blastomere of the vegetal (lower) hemisphere of the cleaving embryo.
amphibian_anatomy_curators
macromere
true
uberon/phenoscape-anatomy
UBERON:3010284
macromere
AAO:BJB
Unpigmented, larger blastomere of the vegetal (lower) hemisphere of the cleaving embryo.
obsolete bottle cell
Cell type that is first to migrate inwards at the blastopore during gastrulation.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
replace with CL:0000020 once cl is released.
true
uberon/phenoscape-anatomy
AAO:BJB
Cell type that is first to migrate inwards at the blastopore during gastrulation.
obsolete chondrocyte
Polymorphic cell type that forms cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Polymorphic cell type that forms cartilage.
obsolete chondrocyte
true
obsolete ciliated cell
amphibian_anatomy_curators
ciliated cell
true
uberon/phenoscape-anatomy
UBERON:3010287
ciliated cell
obsolete fibroblast
A connective tissue cell that secretes an extracellular matrix rich in collagen and other macromolecules.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A connective tissue cell that secretes an extracellular matrix rich in collagen and other macromolecules.
AAO:BJB
obsolete follicle cell
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete germ line cell
amphibian_anatomy_curators
germ line cells
true
uberon/phenoscape-anatomy
UBERON:3010290
germ line cells
obsolete gamete
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete germ cell
amphibian_anatomy_curators
germ cells
true
uberon/phenoscape-anatomy
UBERON:3010292
germ cells
obsolete primordial germ cell
PGC
Primitive cell type that is involved in the reproduction of the organism beginning with the sexual differentiation of the gonads at NF stage 52. In males specifically, it migrates from the genital ridge cortical region into the medullary tissue, where it forms spermatogonia. In females it is embedded in the cortical region and multiplies as oogonia.
amphibian_anatomy_curators
primitive germ cell
true
uberon/phenoscape-anatomy
ISBN:0815318960
Primitive cell type that is involved in the reproduction of the organism beginning with the sexual differentiation of the gonads at NF stage 52. In males specifically, it migrates from the genital ridge cortical region into the medullary tissue, where it forms spermatogonia. In females it is embedded in the cortical region and multiplies as oogonia.
UBERON:3010293
primitive germ cell
PGC
UBERON:3010293
obsolete spermatozoon
A mature male germ cell that develops from a spermatid.
amphibian_anatomy_curators
sperm
spermatozoa
true
uberon/phenoscape-anatomy
UBERON:3010295
spermatozoa
UBERON:3010295
sperm
A mature male germ cell that develops from a spermatid.
CL:0000019
obsolete oocyte
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete primary oogonium
A germ cell that is a primordial oocyte in a female and that develops into secondary oogonia by mitotic division.
amphibian_anatomy_curators
primary oogonia
true
uberon/phenoscape-anatomy
UBERON:3010297
primary oogonia
A germ cell that is a primordial oocyte in a female and that develops into secondary oogonia by mitotic division.
XAO:EJS
obsolete primary spermatogonium
A germ cell that is a primordial spermatocyte in a male and that develops into secondary spermatogonia by mitotic division.
amphibian_anatomy_curators
primary spermatogonia
true
uberon/phenoscape-anatomy
UBERON:3010298
primary spermatogonia
A germ cell that is a primordial spermatocyte in a male and that develops into secondary spermatogonia by mitotic division.
ISSN:0289-0003
obsolete secondary oogonium
A type of germ cell that results from the mitotic division of a primary oogonium.
amphibian_anatomy_curators
secondary oogonia
true
uberon/phenoscape-anatomy
A type of germ cell that results from the mitotic division of a primary oogonium.
XAO:EJS
UBERON:3010299
secondary oogonia
obsolete secondary spermatogonium
A type of germ cell that results from the mitotic division of a primary spermatogonium.
amphibian_anatomy_curators
secondary spermatogonia
true
uberon/phenoscape-anatomy
A type of germ cell that results from the mitotic division of a primary spermatogonium.
ISSN:0289-0003
UBERON:3010300
secondary spermatogonia
obsolete spermatid
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
fasciculated network of fibrils
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
coelomic envelope
uberon/phenoscape-anatomy
UBERON:3010303
coelomic envelope
obsolete germinal vesicle
GV
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
GV
UBERON:3010305
mitochondrial aggregate
A large distinctive organelle aggregate comprised of mitochondria found in developing oocytes of many species. From Pepling et al. 2007.
Balbiani body
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
mitochondrial cloud
uberon/phenoscape-anatomy
obsolete polar body
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete lymphocyte
A cell of the B cell, T cell, or natural killer cell lineage.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A cell of the B cell, T cell, or natural killer cell lineage.
AAO:BJB
obsolete B cell
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A lymphocyte of B lineage with the phenotype CD19-positive and surface immunoglobulin-positive.
AAO:BJB
obsolete natural killer cell
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.
NK cell
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
NK cell
UBERON:3010310
A lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation via germline encoded activation receptors and also regulate immune responses via cytokine release and direct contact with other cells.
AAO:BJB
obsolete T cell
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.
AAO:BJB
obsolete thymocyte
An immature T cell located in the thymus.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
An immature T cell located in the thymus.
obsolete myoblast
Embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Embryonic (precursor) cell of the myogenic lineage that develops from the mesoderm.
obsolete abdominal myoblast
The myoblast that forms the muscles of the anterior abdominal walls.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
abdominal musculature
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
The myoblast that forms the muscles of the anterior abdominal walls.
UBERON:3010314
UBERON:3010314
abdominal musculature
obsolete neuron
Cell that is the basic unit of nervous tissue, each consisting of a body, an axon, and dendrites, and the purpose of which is to receive, conduct, and transmit impulses in the nervous system.
amphibian_anatomy_curators
nerve cell
true
uberon/phenoscape-anatomy
AAO:BJB
Cell that is the basic unit of nervous tissue, each consisting of a body, an axon, and dendrites, and the purpose of which is to receive, conduct, and transmit impulses in the nervous system.
UBERON:3010315
nerve cell
obsolete pigment cell
Cell type that contains a deposition of coloring matter.
amphibian_anatomy_curators
chromatophore
true
uberon/phenoscape-anatomy
AAO:EJS
Cell type that contains a deposition of coloring matter.
UBERON:3010317
chromatophore
obsolete iridophore
A pigment cell derived from the neural crest. The cell contains flat light-reflecting platelets, probably of guanine, in stacks called reflecting platets or iridisomes. The color-generating components produce a silver, gold, or iridescent color.
amphibian_anatomy_curators
guanophore
true
uberon/phenoscape-anatomy
UBERON:3010318
guanophore
A pigment cell derived from the neural crest. The cell contains flat light-reflecting platelets, probably of guanine, in stacks called reflecting platets or iridisomes. The color-generating components produce a silver, gold, or iridescent color.
AAO:BJB
obsolete melanocyte
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.
amphibian_anatomy_curators
melonophore
true
uberon/phenoscape-anatomy
UBERON:3010319
melonophore
A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.
AAO:BJB
obsolete xanthophore
A pigment cell derived from the neural crest. Contains cartenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A pigment cell derived from the neural crest. Contains cartenoid pigments in structures called pterinosomes or xanthosomes. This gives an appearance ranging from a golden yellow to orange and red.
AAO:BJB
obsolete podocyte
Cell type that is a component of the glomus.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
Cell type that is a component of the glomus.
obsolete stem cell
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
AAO:BJB
obsolete hematopoietic stem cell
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
HSC
amphibian_anatomy_curators
false
true
uberon/phenoscape-anatomy
HSC
UBERON:3010323
A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.
AAO:BJB
obsolete zygote
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.
amphibian_anatomy_curators
fertilized egg
true
uberon/phenoscape-anatomy
AAO:BJB
Diploid cell produced by the fusion of sperm cell nucleus and egg cell.
UBERON:3010324
fertilized egg
animal hemisphere
amphibian_anatomy_curators
animal
true
uberon/phenoscape-anatomy
UBERON:0012284
UBERON:3010325
animal
obsolete blastocoel anlage
The first appearance of the antomical space that will become the blastocoel.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
The first appearance of the antomical space that will become the blastocoel.
XAO:curator
equatorial belt
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete perivitelline space
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete sperm entry point
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
vegetal hemisphere
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
UBERON:0012285
obsolete germ plasm
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete vegetal yolk mass
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
globe
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
eye ball
uberon/phenoscape-anatomy
UBERON:3010346
eye ball
true
obsolete pigment layer
amphibian_anatomy_curators
replaced with pigment epithelium of eye because was previously asserted to be part of a camera-type eye.
true
uberon/phenoscape-anatomy
branchial arch skeleton
Pharyngeal arch skeleton 3-7>
Skeletal and cartilaginous elements of the branchial arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first branchial arch, or the third pharyngeal arch, but some authors do not follow this convention.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
gill arch skeleton
uberon/phenoscape-anatomy
visceral arch skeleton
PMID:8589427
Skeletal and cartilaginous elements of the branchial arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first branchial arch, or the third pharyngeal arch, but some authors do not follow this convention.
UBERON:3010369
visceral arch skeleton
true
UBERON:3010369
gill arch skeleton
Pharyngeal arch skeleton 3-7>
UBERON:3010369
unicellular gland
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
inner fin tissue
Part of the fin consisting of a supporting core of mesenchyme and extracellular matrix.
amphibian_anatomy_curators
inner fin
uberon/phenoscape-anatomy
PMID:15188431
Part of the fin consisting of a supporting core of mesenchyme and extracellular matrix.
outer fin tissue
In frogs (Anura) the outer fin tissue is present only in tadpoles and sometimes during the embryogenesis of species without tadpoles. In salamanders and caecilians tail fins can persist into reproductive maturity.
Part of the fin consisting of flattened epidermal cells elevated into a keel-like structure.
amphibian_anatomy_curators
outer fin
outer tail fin
tail fin
uberon/phenoscape-anatomy
PMID:15188431
Part of the fin consisting of flattened epidermal cells elevated into a keel-like structure.
mesonephric early proximal tubule
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
mesonephric late distal segment
DT1
The site of bicarbonate resorption in the adult kidney. It is equivalent to the convoluted distal segment of metanephric nephrons. [Xenbase]
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
DT1
UBERON:3010393
true
true
mesonephric late proximal tubule
PT3
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
late proximal segment
opisthonephros
proximal straight segment
proximal tubule 3
uberon/phenoscape-anatomy
UBERON:3010394
proximal straight segment
true
PT3
UBERON:3010394
UBERON:3010394
proximal tubule 3
true
UBERON:3010394
late proximal segment
UBERON:3010394
opisthonephros
follicle layer
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
capillary system of liver
The smallest of the blood vessels, parts of the microcirculation, of the liver.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
liver capillary
uberon/phenoscape-anatomy
true
true
The smallest of the blood vessels, parts of the microcirculation, of the liver.
XAO:curator
UBERON:3010404
liver capillary
left channel of ventral aorta
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
posterior palatine artery
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
larval aorta
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
right channel of ventral aorta
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete portion of
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
archenteron floor
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
archenteron roof
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
gastrocoel roof
uberon/phenoscape-anatomy
true
UBERON:3010432
gastrocoel roof
blastocoel roof
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
post-anal gut
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. extensor digitorum communis longus
It arises on the lateral epicondyle of the humerus by two heads: the lateral one arises by a thin tendon in common with the m.extensor carpi ulnaris with fibers proximally fused. The internal one arises by a short tendon in common with proximally fused fibers of the m. extensor carpi radialis. It divides distally in two heads: the external head inserts with a long and thin tendon on the metacarpal V, at the same point of insertion of the m. abductor brevis dorsalis digiti V; the internal one inserts by a thin tendon on the proximal region of the metacarpal IV, between the m. extensor brevis superficialis digiti IV and the m. extensor brevis medius digiti IV (Pristimantis bogotensis).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
It arises on the lateral epicondyle of the humerus by two heads: the lateral one arises by a thin tendon in common with the m.extensor carpi ulnaris with fibers proximally fused. The internal one arises by a short tendon in common with proximally fused fibers of the m. extensor carpi radialis. It divides distally in two heads: the external head inserts with a long and thin tendon on the metacarpal V, at the same point of insertion of the m. abductor brevis dorsalis digiti V; the internal one inserts by a thin tendon on the proximal region of the metacarpal IV, between the m. extensor brevis superficialis digiti IV and the m. extensor brevis medius digiti IV (Pristimantis bogotensis).
dorsal marginal zone
DMZ
Marginal zone that is a key embryonic tissue region of the early gastrula stage embryo and that houses the Spemann-Mangold organizer.
Spemann organizer
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
organizer
uberon/phenoscape-anatomy
UBERON:3010449
organizer
DMZ
PMID:17368611
Spemann organizer
UBERON:3010449
ASD:BJB
Marginal zone that is a key embryonic tissue region of the early gastrula stage embryo and that houses the Spemann-Mangold organizer.
dorso-lateral marginal zone
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
involuting marginal zone
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
non-involuting marginal zone
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ventral marginal zone
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
VMZ
amphibian_anatomy_curators
uberon/phenoscape-anatomy
UBERON:3010453
VMZ
ventro-lateral marginal zone
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
blastopore lip
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
lower blastopore lip
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ventral blastopore lip
UBERON:3010456
ventral blastopore lip
upper blastopore lip
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
dorsal blastopore lip
organizer
uberon/phenoscape-anatomy
UBERON:3010457
organizer
UBERON:3010457
dorsal blastopore lip
suprarostral ala
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
ala
alae
amphibian_anatomy_curators
uberon/phenoscape-anatomy
alae
true
true
animal cap
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
animal ectoderm
uberon/phenoscape-anatomy
UBERON:3010463
animal ectoderm
animal cap inner layer
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
animal cap outer layer
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
muscular artery
Part of the external carotid which delivers blood to the mm rectus cervicis and interhyoideus posterior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Part of the external carotid which delivers blood to the mm rectus cervicis and interhyoideus posterior.
lateral pretrosal artery
Part of the internal carotid which supplies blood to the ear and branches to two additional arteries.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Part of the internal carotid which supplies blood to the ear and branches to two additional arteries.
mandibular artery
Part of lateral pretrosal artery which supplies blood to the roof of the mouth.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Part of lateral pretrosal artery which supplies blood to the roof of the mouth.
cutaneus artery
Artery which supplies blood to the thymus and parotoid region.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Artery which supplies blood to the thymus and parotoid region.
coeliaco-mesenteric artery
This artery has many branches which supply blood to various organs in the viscus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
This artery has many branches which supply blood to various organs in the viscus.
gastrico-linealis
Major branch which supplies blood to the spleen and dorsal wall of the stomach.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Major branch which supplies blood to the spleen and dorsal wall of the stomach.
duodeno-pancreatic artery
Major branch which supplies blood to pancreas and duodenum.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Major branch which supplies blood to pancreas and duodenum.
duodeno-hepatic artery
Major branch supplying blood via many smaller branches to the liver, duodenum, ventral wall of the stomach, and gall bladder.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Major branch supplying blood via many smaller branches to the liver, duodenum, ventral wall of the stomach, and gall bladder.
oviduct artery
One of three arteries which are part of the renal artery supplying blood to the anterior, middle, and posterior parts of the oviduct.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
One of three arteries which are part of the renal artery supplying blood to the anterior, middle, and posterior parts of the oviduct.
true
postcaval vein
One of three major veins which enter the sinus venosus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
One of three major veins which enter the sinus venosus.
precaval vein
Either of a pair of veins which enter on either side of the sinus venosus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Either of a pair of veins which enter on either side of the sinus venosus.
lateral vein
Either of the veins which collect blood from the trunk and skin and drain into the subclavian vein.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Either of the veins which collect blood from the trunk and skin and drain into the subclavian vein.
cutaneus magnus
Anterior part of the lateral vein.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Anterior part of the lateral vein.
ventral abdominal vein
A vein formed by the combination of veins in the pelvic region which collects blood from the liver, stomach, intestines, and gall bladder.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A vein formed by the combination of veins in the pelvic region which collects blood from the liver, stomach, intestines, and gall bladder.
AAO:BJB
Jacobson's vein
Either of a pair of veins which receives many small vesicles from the kidney and collects blood from the oviducal vein.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Either of a pair of veins which receives many small vesicles from the kidney and collects blood from the oviducal vein.
oviducal vein
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Vein which collects blood from the oviduct.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Vein which collects blood from the oviduct.
M. plantaris longus
Originates by two heads, one from the dorso-distal border of the aponeurosis covering the knee and the other from two tendinous branches along the medial border of the knee joint. Inserts by a thick, broad tendon to form the aponeurosis plantaris.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates by two heads, one from the dorso-distal border of the aponeurosis covering the knee and the other from two tendinous branches along the medial border of the knee joint. Inserts by a thick, broad tendon to form the aponeurosis plantaris.
bronchial tube
Either of the short tubes which bifurcate posteriorly from the trachea and lead into the lungs.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Either of the short tubes which bifurcate posteriorly from the trachea and lead into the lungs.
frontoparietal fenestra
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
articular process of palatoquadrate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
ovisac
Part of the ovary consisting of a thin sheath of connective tissue enclosing the ovarian follicles.
UBERON:3010782
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:BJB
Part of the ovary consisting of a thin sheath of connective tissue enclosing the ovarian follicles.
true
obsolete mesorchium
A thin membrane which attaches the testes to the kidneys and supports the efferent ductules from the testes to the kidneys.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A thin membrane which attaches the testes to the kidneys and supports the efferent ductules from the testes to the kidneys.
AAO:BJB
pars nervosa
Region of the neurohypophysis which secretes neurohypophyseal hormones, regulating water loss and salt balance.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
AAO:BJB
Region of the neurohypophysis which secretes neurohypophyseal hormones, regulating water loss and salt balance.
median pars intermedia
Region of the adenohypophysis which secretes melanophore-stimulating hormone, affecting the integumentary chromatophores.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Region of the adenohypophysis which secretes melanophore-stimulating hormone, affecting the integumentary chromatophores.
true
obsolete bilateral pars tuberalis
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete gastrula cell
A cell of the embryo in the early stage following the blastula, characterized by morphogenetic cell movements, cell differentiation, and the formation of the three germ layers.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A cell of the embryo in the early stage following the blastula, characterized by morphogenetic cell movements, cell differentiation, and the formation of the three germ layers.
AAO:BJB
obsolete blastoderm cell
An undifferentiated cell produced by early cleavages of the fertilized egg (zygote).
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
AAO:BJB
An undifferentiated cell produced by early cleavages of the fertilized egg (zygote).
obsolete ectodermal cell
A cell of the outer of the three germ layers of the embryo.
amphibian_anatomy_curators
ectoderm cell
true
uberon/phenoscape-anatomy
A cell of the outer of the three germ layers of the embryo.
AAO:BJB
UBERON:3010554
ectoderm cell
obsolete endodermal cell
A cell of the inner of the three germ layers of the embryo.
amphibian_anatomy_curators
endoderm cell
true
uberon/phenoscape-anatomy
UBERON:3010555
endoderm cell
A cell of the inner of the three germ layers of the embryo.
AAO:BJB
obsolete mesodermal cell
A cell of the middle germ layer of the embryo.
amphibian_anatomy_curators
mesoblast
mesoderm cell
true
uberon/phenoscape-anatomy
UBERON:3010556
mesoblast
A cell of the middle germ layer of the embryo.
AAO:BJB
UBERON:3010556
mesoderm cell
triangular process
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
quadrato-ethmoid ligament
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
retroarticular process of the palatoquadrate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
anterior process of the palatoquadrate
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
suboccular foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
craniopalatine foramina
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
carotid foramina
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
pila preoptica
A strut of cartilage extending dorsally from the basal plate and with other similar cartilages forming the sides of the brain case. Posterior to the pila preoptica is the pila antoptica between these two cartilages emerges the optic and trochlear nerves.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
prootic foramen
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
prenasal
A dermal bone that forms anterior to the premaxillae between the maxillae and articulates with the nasals posteriorly.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A dermal bone that forms anterior to the premaxillae between the maxillae and articulates with the nasals posteriorly.
AAO:LT
basibranchial I
Bilaterally unpaired ventral element with which articulates with lateral paired elements.
Copula I
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:DBW
Bilaterally unpaired ventral element with which articulates with lateral paired elements.
Copula I
UBERON:3010583
mandibular arch neural crest
Anterior most migratory stream of cranial neural crest.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Anterior most migratory stream of cranial neural crest.
true
true
basibranchial II
Copula II
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Unpaired medial element that articulates with the anterior basibrachial I (if present).
amphibian_anatomy_curators
uberon/phenoscape-anatomy
urohyal
Copula II
UBERON:3010585
UBERON:3010585
urohyal
AAO:EJS
Unpaired medial element that articulates with the anterior basibrachial I (if present).
vasa efferentia
Sperm travel through these 4 or 5 fine ducts which pass through the mesorchium from the testis to the sexual kidney.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Sperm travel through these 4 or 5 fine ducts which pass through the mesorchium from the testis to the sexual kidney.
hyoid arch neural crest
Population of cranial neural crest that give rise to hyoid arch elements.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Population of cranial neural crest that give rise to hyoid arch elements.
cloacal papilla
A small, ridge-like projection from the antero-ventral wall of the cloacal chamber.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A small, ridge-like projection from the antero-ventral wall of the cloacal chamber.
AAO:BMZ
true
amphibian cloacal gland
A structure that surrounds the cloacal opening, consisting of a mass of coarse tubules.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
A structure that surrounds the cloacal opening, consisting of a mass of coarse tubules.
AAO:BMZ
obsolete erythrophore
Note that this class originally had axiom that it was part of the integument. However, the term had no definition and one can use the general erythrophore def from CL.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
stratum spongiosum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
granular gland
A gland that contains toxic secretions within the lumen. In frogs and salamanders, this is the larger of the two types of gland, the other being the mucuous gland[Kardong]
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
poison gland
ISBN10:0073040584
UBERON:cjm
poison gland
A gland that contains toxic secretions within the lumen. In frogs and salamanders, this is the larger of the two types of gland, the other being the mucuous gland[Kardong]
ISBN10:0073040584
UBERON:cjm
body gland
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
cranial glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
limb glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
obsolete sensory receptors
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
laryngo-tracheal chamber
Muscular vestibule between the pharynx and lungs, lying between the posterior cornua of the hyoid.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Muscular vestibule between the pharynx and lungs, lying between the posterior cornua of the hyoid.
cartilago lateralis of aryngo-tracheal chamber
A series of semicircular cartilages on the side of the laryngo-tracheal chamber.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
cartilago lateralis
true
A series of semicircular cartilages on the side of the laryngo-tracheal chamber.
AAO:BMZ
constrictor laryngis externus
Involved in the movement of the arytenoid cartilages.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
hyolaryngus
sphincter anterior
uberon/phenoscape-anatomy
UBERON:3010618
hyolaryngus
UBERON:3010618
sphincter anterior
AAO:BMZ
Involved in the movement of the arytenoid cartilages.
dilatator laryngis
Involved in the movement of the arytenoid cartilages.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Involved in the movement of the arytenoid cartilages.
constrictor laryngis anterior
Involved in the movement of the arytenoid cartilages.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
sphincter posterior
uberon/phenoscape-anatomy
AAO:BMZ
Involved in the movement of the arytenoid cartilages.
UBERON:3010621
sphincter posterior
subarticular sesamoids
Is an endochondral structure located on the ventral to the junction between, in the hand, the metacarpal and most proximal phalanx of the digit and between phalanges, and in the foot between the metatarsal and most proximal phalanx of the digit and between phalanges. Typically subarticular sesamoids are found with the subarticular tubercles.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010674
amphibian_anatomy_curators
to edit more later
uberon/phenoscape-anatomy
true
true
embryonic hypochord
A transient rod-like structure ventral to the notochord in salamander embryos. Derived from endoderm.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A transient rod-like structure ventral to the notochord in salamander embryos. Derived from endoderm.
AAO:EJS
obsolete Merkel cell
Merkel cells
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
Merkel cells
UBERON:3010626
obsolete leydig cells
A type of mucus and/or fluid secreting cell in larvae.
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A type of mucus and/or fluid secreting cell in larvae.
AAO:BMZ
dorsal ramus of occulomotor nerve
Innervates m. rectus superior (m. dorsal rectus).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Innervates m. rectus superior (m. dorsal rectus).
true
true
obsolete sesamoid
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010630
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete Stiftchenzellen
Possibly chemoreceptor cells in anuran larvae.
amphibian_anatomy_curators
replace with CL_0007017 once CL is released.
true
uberon/phenoscape-anatomy
AAO:BMZ
Possibly chemoreceptor cells in anuran larvae.
ventral ramus of occulomotor nerve
Innervates m. rectus medialis, m. rectus inferior, m. obliquus inferior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:DSM
Innervates m. rectus medialis, m. rectus inferior, m. obliquus inferior.
obsolete flask cell
Type of cell that appears in epidermis during metamorphosis and is rich in mitochondria.
amphibian_anatomy_curators
replaced by CL_0007023 once cl is released.
true
uberon/phenoscape-anatomy
AAO:BMZ
Type of cell that appears in epidermis during metamorphosis and is rich in mitochondria.
obsolete goblet cell
A mucous surface cell type known in tadpoles of Xenopus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
A mucous surface cell type known in tadpoles of Xenopus.
AAO:BMZ
egg capsules
Protective membranes that surround amphibian embryos.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Protective membranes that surround amphibian embryos.
obsolete mucous surface cell
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Type of mucous-producing cell that appears in early larval stages and persists after metamorphosis.
amphibian_anatomy_curators
replace with CL_0007019 once cl is released.
true
uberon/phenoscape-anatomy
AAO:BMZ
Type of mucous-producing cell that appears in early larval stages and persists after metamorphosis.
obsolete ciliary cell
A type of cell that develops in embryos and functions in embryonic movements.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
ciliary cells
replace with CL_0007018 once cl is released.
true
uberon/phenoscape-anatomy
UBERON:3010638
ciliary cells
A type of cell that develops in embryos and functions in embryonic movements.
AAO:BMZ
cephalodorsosubpharyngeus
One of the principal muscles used in swallowing.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
One of the principal muscles used in swallowing.
levator bulbi
One of the principal muscles used in swallowing.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
One of the principal muscles used in swallowing.
ramules nasalis lateralis
First branch gives rise to two ramules that border the naris and innervate the surrounding tissue.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
First branch gives rise to two ramules that border the naris and innervate the surrounding tissue.
ramus nasalis medialis
First branch gives rise to two ramules that border the naris and innervate the surrounding tissue.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
First branch gives rise to two ramules that border the naris and innervate the surrounding tissue.
true
rectus cervicis
Retracts the hyoid and, therefore, the tongue.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Retracts the hyoid and, therefore, the tongue.
subhyoideus
Deep, visceral muscle associated with tongue movement.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Deep, visceral muscle associated with tongue movement.
subarcualis rectus I
Deep, visceral muscle associated with tongue movement.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Deep, visceral muscle associated with tongue movement.
ramus nasalis internus
Distal part of the opthalmicus profundus gives rise to 2 ramules: palatinus and cutaneous.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Distal part of the opthalmicus profundus gives rise to 2 ramules: palatinus and cutaneous.
m. intertransversarius capitus superior
Involved in the movement of the head.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Involved in the movement of the head.
ramule palatinus
Ramules that descends towards the buccal roof and give rise to several short branches that anastomose with palatine ramus of the facial nerve.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Ramules that descends towards the buccal roof and give rise to several short branches that anastomose with palatine ramus of the facial nerve.
m. intertransversarius capitis inferior
Involved in the movement of the head.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Involved in the movement of the head.
ramules cutaneous
Many branches of the maxillary ramus that terminate in the integument of the maxillary region.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:3010672
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Many branches of the maxillary ramus that terminate in the integument of the maxillary region.
trunk maxillary-mandibularis
Portion of the trigeminal nerve where the maxillary and mandibular rami run together prior to bifurcating.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Portion of the trigeminal nerve where the maxillary and mandibular rami run together prior to bifurcating.
ramule palatonasalis
Descends and branches to the buccal roof where it anastomoses with the palatine ramus of the facial nerve.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Descends and branches to the buccal roof where it anastomoses with the palatine ramus of the facial nerve.
true
m. rhomboideus anterior
Muscle which originates on the posterior surface of the frontoparietal and the anterior part of the dorsal fascia. Inserts on the ventral surface of the anteromedial corner of the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates on the posterior surface of the frontoparietal and the anterior part of the dorsal fascia. Inserts on the ventral surface of the anteromedial corner of the suprascapula.
bony nodule
Endochondral element distal to terminal phalanx of hind digit.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Endochondral element distal to terminal phalanx of hind digit.
proximal-most prepollical element
Is the proximal-most prepollical element.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
distal-most prepollical element
Is the distal-most prepollical element.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
proximal-most prehallical element
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
distal-most prehallical element
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
fetal tooth
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Type of deciduous dentition found in foetuses and altricial juveniles of some caecilians.
amphibian_anatomy_curators
fetal teeth
uberon/phenoscape-anatomy
AAO:HM
Type of deciduous dentition found in foetuses and altricial juveniles of some caecilians.
UBERON:3010690
fetal teeth
m. opercularis
Muscle which arises from the dorsal m. levator scapulae and extends between the operculum and suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which arises from the dorsal m. levator scapulae and extends between the operculum and suprascapula.
m. cucullaris
Muscle which originates on the prootic and the otic ramus of the squamosal and inserts on the anterior border of the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates on the prootic and the otic ramus of the squamosal and inserts on the anterior border of the suprascapula.
ramus posterior profundus of V3
In the adult anuran, this innervates the muscles levator mandibulare internus and longus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
In the adult anuran, this innervates the muscles levator mandibulare internus and longus.
m. rhomboideus posterior
Muscle which originates from the transverse process of presacral vertebrae IV and insert on the dorso-medial surface of the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the transverse process of presacral vertebrae IV and insert on the dorso-medial surface of the suprascapula.
m. serratus superior
Muscle which originates from the transverse process of presacral vertebrae IV and inserts on the dorso-medial surface of the suprascapula beneath the insertion M. rhomboideus posterior.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the transverse process of presacral vertebrae IV and inserts on the dorso-medial surface of the suprascapula beneath the insertion M. rhomboideus posterior.
m. serratus medius
Muscle which originates from the transverse process of presacral vertebrae III and inserts on the central and medial surface of the suprascapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the transverse process of presacral vertebrae III and inserts on the central and medial surface of the suprascapula.
m. serratus inferior
Muscle which originates as a posterior and anterior head. The posterior head originates from the transverse process and cartilaginous epiphysis of presacral vertebra IV. The anterior head originates on the same parts of presacral vertebrae III. Both insert on the medial surface of the suprascapula near its postero-ventral edge.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates as a posterior and anterior head. The posterior head originates from the transverse process and cartilaginous epiphysis of presacral vertebra IV. The anterior head originates on the same parts of presacral vertebrae III. Both insert on the medial surface of the suprascapula near its postero-ventral edge.
levator mandibulae externus
Responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Responsible for the closing of the jaw.
m. latissimus dorsi
Muscle which originates from the ventral surface of the dorsal fascia and inserts on the deltoid crest of the humerus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the ventral surface of the dorsal fascia and inserts on the deltoid crest of the humerus.
levator mandibulae longus
Responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Responsible for the closing of the jaw.
obsolete lateral line receptor
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
lateral line nucleus
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
m. dorsalis scapulae
Muscle which originates on the lateral surface of the suprascapulae and inserts on the deltoid crest of the humerus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates on the lateral surface of the suprascapulae and inserts on the deltoid crest of the humerus.
levator mandibulae articularis
Muscle which is responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
m. adductor mandibulae anterior articularis
m. adductor mandibulae externus minor
m. adductor mandibulae posterior
m. adductor mandibulae posterior articularis
uberon/phenoscape-anatomy
AAO:BMZ
Muscle which is responsible for the closing of the jaw.
UBERON:3010708
m. adductor mandibulae posterior
UBERON:3010708
m. adductor mandibulae posterior articularis
UBERON:3010708
m. adductor mandibulae anterior articularis
UBERON:3010708
m. adductor mandibulae externus minor
levator mandibulae lateralis
Responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
m. adductor mandibulae posterior articularis
uberon/phenoscape-anatomy
AAO:BMZ
Responsible for the closing of the jaw.
UBERON:3010709
m. adductor mandibulae posterior articularis
m. interscapularis
Muscle which originates from the ventro-medial surface of the suprascapula and inserts on the ventral surface of the scapula.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the ventro-medial surface of the suprascapula and inserts on the ventral surface of the scapula.
levator mandibulae externus superficialis
Responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Responsible for the closing of the jaw.
levator mandibulae externus profundus
Muscle which is responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Muscle which is responsible for the closing of the jaw.
m. sternoepicoracoideus
Muscle which originates on the anterior border of the distal part of the sternal horn and inserts antero-medially on the postero-dorsal surface of the epicoracoid cartilage.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates on the anterior border of the distal part of the sternal horn and inserts antero-medially on the postero-dorsal surface of the epicoracoid cartilage.
diverticulum
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
dilated medial process of metacarpal IV
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
ramus hyomandibularis
The posttrematic branch of the facial nerve, both motor and sensory in function.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:CAM
The posttrematic branch of the facial nerve, both motor and sensory in function.
true
limb villosities
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ramus palatinus
Sensory branch of facial nerve from palatal region.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:CAM
Sensory branch of facial nerve from palatal region.
levator quadrati
Responsible for the closing of the jaw.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Responsible for the closing of the jaw.
M. coracoradialis
Muscle which originates from the omosternum and epicoracoid cartilage and inserts on the proximal radioulna.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the omosternum and epicoracoid cartilage and inserts on the proximal radioulna.
ramus muscularis of glossopharyngeus nerve
Branchiomotor branch of the glossopharyngeus nerve innervating the m. subarcuales rectus I.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Branchiomotor branch of the glossopharyngeus nerve innervating the m. subarcuales rectus I.
otic opercular element
Round, flat bone or cartilage that lies in the fenestra ovalis and articulates with the columella.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
otic operculum
uberon/phenoscape-anatomy
AAO:DBW
Round, flat bone or cartilage that lies in the fenestra ovalis and articulates with the columella.
M. coracobrachialis longus
Muscle which originates as a long belly from the dorsal coracoid near the sternum and inserts on the shaft of the humerus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates as a long belly from the dorsal coracoid near the sternum and inserts on the shaft of the humerus.
pterygoideus
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. coracobrachialis brevis
Muscle which originates on the dorsal surface of the coracoid and scapula and inserts on the deltoid crest of the humerus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates on the dorsal surface of the coracoid and scapula and inserts on the deltoid crest of the humerus.
M. flexor carpi ulnaris
Muscle which originates from the medial condyle of the humerus and inserts on the carpus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Muscle which originates from the medial condyle of the humerus and inserts on the carpus.
ramus anterior of CN VIII
Formed by fibers from the anterior semicircular canal and sacculus.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:EJS
Formed by fibers from the anterior semicircular canal and sacculus.
ramus posterior of CN VIII
Composed of two rami: a short ventral ramus innervating the cochlea (lagena and papille basilar), and a long dorsal ramus innervating the posterior semicircular canal.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
AAO:EJS
Composed of two rami: a short ventral ramus innervating the cochlea (lagena and papille basilar), and a long dorsal ramus innervating the posterior semicircular canal.
M. palmaris longus
Originates from the medial epicondyle of the humerus and inserts on the palmar aponeurosis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the medial epicondyle of the humerus and inserts on the palmar aponeurosis.
M. palmaris profundis
Originates on the ulnar aspect of the radioulna and inserts on the palmar aponeurosis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the ulnar aspect of the radioulna and inserts on the palmar aponeurosis.
M. flexor antibrachii medialis
Originates on the medial epicondyle of the humerus and inserts on the radial aspect of the radioulna.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the medial epicondyle of the humerus and inserts on the radial aspect of the radioulna.
ramus auricularis of the vagus nerve
An afferent branch of the vagus nerve.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
An afferent branch of the vagus nerve.
M. ulnocarpalis
Originates along distal third of the ulna and inserts on the ulnare.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates along distal third of the ulna and inserts on the ulnare.
interhyoideus posterior
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. flexor antibrachii lateralis superficialis
Originates as a superior and inferior head. The superior head originates on the outer edge of the humerus and the inferior head originates on the lateral epicondyle of the humerus. Both bellies converge to form a tendon, which inserts on the carpus and the extensor tendon of digit I.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates as a superior and inferior head. The superior head originates on the outer edge of the humerus and the inferior head originates on the lateral epicondyle of the humerus. Both bellies converge to form a tendon, which inserts on the carpus and the extensor tendon of digit I.
M. flexor antibrachii lateralis profundus
Originates on the lateral epicondyle of the humerus and inserts on the lower ridge of the radioulna.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the lateral epicondyle of the humerus and inserts on the lower ridge of the radioulna.
M. coccygeosacralis
Originates on the lateral surface of the urostyle and inserts on the neural arch of the sacrum or on the sacral diapophysis.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the lateral surface of the urostyle and inserts on the neural arch of the sacrum or on the sacral diapophysis.
T-shaped terminal phalanx
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
submentalis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. coccygeoiliacus
Originates on the lateral surface of the urostyle and passes ventral to the sacral diapophysis to insert on the anterior and medial surfaces of the ilial shaft.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the lateral surface of the urostyle and passes ventral to the sacral diapophysis to insert on the anterior and medial surfaces of the ilial shaft.
M. iliolumbaris
Originates on the anterior and lateral aspect of the ilial shaft and inserts on the transverse processes of presacral vertebrae IV-VII.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the anterior and lateral aspect of the ilial shaft and inserts on the transverse processes of presacral vertebrae IV-VII.
descending branch of the vagus nerve
Major branch of the vagus supplying parasympathetic innervation to viscera.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Major branch of the vagus supplying parasympathetic innervation to viscera.
true
ramus muscularis of vagus nerve
Motor nervous branch of the vagus innervating m. subarcualis rectus I.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:CAM
Motor nervous branch of the vagus innervating m. subarcualis rectus I.
lobe
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
ramus recurrens
Branch of the vagus nerve that separates from the vagus well postcranially, then continues anteriorly to innervate the larynx.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
AAO:EJS
Branch of the vagus nerve that separates from the vagus well postcranially, then continues anteriorly to innervate the larynx.
ramus superficial ophthalmic
Dorsal branch of ADLLN that innervates supraorbital line of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Dorsal branch of ADLLN that innervates supraorbital line of neuromasts.
M. coccygeocutaneus
Originates from the posterior tip of the urostyle and inserts on the cloacal musculature and the overlying skin.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates from the posterior tip of the urostyle and inserts on the cloacal musculature and the overlying skin.
ramus buccal
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral ramus of the ADLLN that innervates the infraorbital line of neuromasts.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Ventral ramus of the ADLLN that innervates the infraorbital line of neuromasts.
laryngeus ventralis
A branch of the vagus nerve innervating heart, stomach, and lung muscle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A branch of the vagus nerve innervating heart, stomach, and lung muscle.
AAO:CAM
ramus mandibularis externus
Runs together with motor fibers of the hyomandibular trunk of VII. The mandibularis externus of AVLLN branches into three ramules .
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
Runs together with motor fibers of the hyomandibular trunk of VII. The mandibularis externus of AVLLN branches into three ramules .
dorsal sympathetic chain
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
ventral sympathetic chain
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
M. dorsalis trunci
Originates on the postero-dorsal edge of the postzygopophyses and insert on the dorsal surface of the neural arch of the posterior, adjacent vertebra.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Originates on the postero-dorsal edge of the postzygopophyses and insert on the dorsal surface of the neural arch of the posterior, adjacent vertebra.
jugal ramule
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This ramule innervates the jugal line of neuromasts and is the dorsal branch of the ramus mandibularis externus.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
This ramule innervates the jugal line of neuromasts and is the dorsal branch of the ramus mandibularis externus.
pars recta
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
pars convoluta
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
m. oblique externus
Originates on the posterior margin of the suprascapula and the epaxial fascia and inserts ventrally on the lateral fascia of the M. rectus abdominus and the ilial shaft.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Originates on the posterior margin of the suprascapula and the epaxial fascia and inserts ventrally on the lateral fascia of the M. rectus abdominus and the ilial shaft.
m. oblique internus
A muscular sheet in which the fibers run in right angles to those of the m. oblique externus, slanting downward anteriorly. This is one of three sheets composing the flank musculature.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A muscular sheet in which the fibers run in right angles to those of the m. oblique externus, slanting downward anteriorly. This is one of three sheets composing the flank musculature.
AAO:BJB
m. transversus
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
pars subvertebralis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
pars transversalis
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
muscle rectus abdominis superficialis
A component of the rectus abdominal muscle that is some taxa.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
m. rectus abdominis profundus
In salamanders (Caudata) the m. rectus abdominis profundus is sometimes continuous with the m. rectus cervicis profundus. In extreme cases (family Plethodontidae) represents an undivided muscle that arises from the psoterior border of the ischium that proceds uninterrupted to the tongue pad.
A component of the rectus abdominal muscle that is some taxa (see comment) forms a disctinct and separate muscle.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
m. ypsiloideus anterior
Hypaxial muscle in which contraction elevates the ypsiloid cartilage; originates from the anterior edge of the lateral process of the ypsiloid cartilage and insert on the anteriorly adjacent inscription.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Hypaxial muscle in which contraction elevates the ypsiloid cartilage; originates from the anterior edge of the lateral process of the ypsiloid cartilage and insert on the anteriorly adjacent inscription.
oral ramule
Medial branch of the ramus mandibularis externus. This ramule innervates the oral and angular lines of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Medial branch of the ramus mandibularis externus. This ramule innervates the oral and angular lines of neuromasts.
preopercular ramule
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral branch of the ramus mandibularis externus. This ramule have a superior and an inferior division, both innervating the preopercular line of neuromasts.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Ventral branch of the ramus mandibularis externus. This ramule have a superior and an inferior division, both innervating the preopercular line of neuromasts.
ramus supraotic
Small ramus of the MLLN that innervates neuromasts located at the posterior margin of the otic capsule.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
Small ramus of the MLLN that innervates neuromasts located at the posterior margin of the otic capsule.
m. ypsiloideus posterior
Contraction depresses the ypsiloid cartilage; arises from the anterodorsal edge of the pubis deep to the m. rectus abdominis profundus and spreads anteriorly in a fan shape to insert on the lateral edges of the shaft and the posterior edges of the lateral processes of the ypsiloid cartilage .
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BMZ
Contraction depresses the ypsiloid cartilage; arises from the anterodorsal edge of the pubis deep to the m. rectus abdominis profundus and spreads anteriorly in a fan shape to insert on the lateral edges of the shaft and the posterior edges of the lateral processes of the ypsiloid cartilage .
ramulus suprabranchialis anterior
Ramulus that innervates the suprabranchial line of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
Ramulus that innervates the suprabranchial line of neuromasts.
ramulus suprabranchialis posterior
Ramulus innervating the suprabranchial line of neuromasts.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
Ramulus innervating the suprabranchial line of neuromasts.
ramus lateral
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
Ventral division of the trunk of the PLLN, this prominent ramus extends over the lateral trunk and caudal musculature innervating the lateral line of neuromasts.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
Ventral division of the trunk of the PLLN, this prominent ramus extends over the lateral trunk and caudal musculature innervating the lateral line of neuromasts.
courtship gland
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
ramus ventral
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
This ramus leaves the postotic ganglionic complex together with the third branchial ramus of X. This ramule innervates the ventral line of neuromasts.
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:SIQ
This ramus leaves the postotic ganglionic complex together with the third branchial ramus of X. This ramule innervates the ventral line of neuromasts.
Dorsal tail tubercle
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
vent glands
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
m. flexor indicis superficialis proprius
Originates on the internal border of the distal carpal 5-4-3 and inserts on the distal end of phalynx I.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:MEJ
Originates on the internal border of the distal carpal 5-4-3 and inserts on the distal end of phalynx I.
hepatic peritoneum
Peritoneum that surrounds the liver.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:JMG
Peritoneum that surrounds the liver.
gastrointestinal peritoneum
Peritoneum that surrounds the stomach and intestines.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:JMG
Peritoneum that surrounds the stomach and intestines.
suboccular arch
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
hyoquadrate process
A projection on the suboccular arch, ventral to the muscular process, that serves as the articulation point for the lateral process of the ceratohyal of the hyobranchial skeleton.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A projection on the suboccular arch, ventral to the muscular process, that serves as the articulation point for the lateral process of the ceratohyal of the hyobranchial skeleton.
AAO:AMM
processus triangularis of palatoquadrate cartilage
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
processus triangularis
true
true
true
true
anterior prenasal cartilage
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
true
commissura terminales of hyoid apparatus
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
commissura terminales
true
sulcus intermedius
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
spicule
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
occipito-petrosal
Fusion of the occipital segment or occipital ring and otic capsule (Francis, 1934).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
occipital-petrosal
occipito-otic
otic-occipital complex
uberon/phenoscape-anatomy
AAO:EJS
Fusion of the occipital segment or occipital ring and otic capsule (Francis, 1934).
otic-occipital complex
Phenoscape:DB
occipital segment
Metameric segment forming the back of the skull.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:EJS
Metameric segment forming the back of the skull.
true
Posterolateral Supplementary Element
A muscle slip arising from the ventral surface of the mandible by means of the ligament near the site of mandibular articulation. The fibers pass anteromedially and attach upon the ventral surfaces of the principal element of the m. intermandibularis (Tyler, 1971).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A muscle slip arising from the ventral surface of the mandible by means of the ligament near the site of mandibular articulation. The fibers pass anteromedially and attach upon the ventral surfaces of the principal element of the m. intermandibularis (Tyler, 1971).
AAO:EJS
Apical Supplementary Element
A muscle slip arising from the lingual surface of the mandible on each side of the m. submentalis. The fibers pass posteromedially and attach upon the median raphe of the principal element (Tyler, 1971).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A muscle slip arising from the lingual surface of the mandible on each side of the m. submentalis. The fibers pass posteromedially and attach upon the median raphe of the principal element (Tyler, 1971).
AAO:EJS
Anterolateral Supplementary Element
A muscle slip arising from the lingual surface of the mandible on the anterior portion of the bone. The fibers pass anteriorly, parallel to the mandible, and attach upon the ventral surface of the m. submentalis (Tyler, 1971).
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
A muscle slip arising from the lingual surface of the mandible on the anterior portion of the bone. The fibers pass anteriorly, parallel to the mandible, and attach upon the ventral surface of the m. submentalis (Tyler, 1971).
AAO:EJS
portion of cell substance
CARO:0000063
Portion of organism substance located within a cell.
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
AAO:BJB
Portion of organism substance located within a cell.
portion of cell substance
CARO:0000063
first pancreatic bud
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
pancreas
uberon/phenoscape-anatomy
UBERON:3011040
pancreas
gasserian ganglion
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
gasserian ganglia
uberon/phenoscape-anatomy
UBERON:3011045
gasserian ganglia
genital system
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
obsolete posterior cardinal vein
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete tympanum
amphibian_anatomy_curators
true
tympanic membrane
uberon/phenoscape-anatomy
UBERON:3011108
tympanic membrane
early proximal tubule
2011-04-20T05:19:55Z
PT2
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
PT2
UBERON:3011120
true
late distal segment
2011-04-20T05:21:45Z
This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
amphibian_anatomy_curators
uberon/phenoscape-anatomy
true
true
obsolete late proximal tubule
2011-04-20T05:22:49Z
amphibian_anatomy_curators
true
uberon/phenoscape-anatomy
obsolete mode of ossification
GO:0001503
GO:0001503
The formation of bone or of a bony substanc, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
GOC:mtg_mpo, PMID:17572649
The formation of bone or of a bony substanc, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.
permanent cartilage
Chondrogenic element that is composed of cartilage that is not replaced.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Chondrogenic element that is composed of cartilage that is not replaced.
PSPUB:0000170
obsolete opercle bone
Dermal bone that forms the postero-dorsal part of the opercular series. The opercle articulates with the hyomandibula antero-dorsally and with the subopercle ventrally. The opercle is a paired bone.
Term resides in TAO.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000250
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Dermal bone that forms the postero-dorsal part of the opercular series. The opercle articulates with the hyomandibula antero-dorsally and with the subopercle ventrally. The opercle is a paired bone.
TAO:curator
obsolete basihyal element
Term resides in TAO.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:0011614
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
obsolete basihyal bone
Endochondral bone that is median and is the anterior-most bone of the ventral hyoid arch.
Term resides in TAO.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:0011618
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Endochondral bone that is median and is the anterior-most bone of the ventral hyoid arch.
TAO:curator
obsolete notochordal cell
CL:0007005
Cell of the notochord, often vacuolated or resembles a chondrocyte.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Cell of the notochord, often vacuolated or resembles a chondrocyte.
VSAO:curator
obsolete notochordal mesodermal cell
CL:0007006
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
obsolete skeletogenic cell
CL:0007001
Cell that has the potential to form a skeletal cell type (e.g., cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized).
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Cell that has the potential to form a skeletal cell type (e.g., cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized).
VSAO:curator
mineralized tissue
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
obsolete basihyal cartilage
Pharyngeal arch cartilage that is median and is the anterior-most cartilage of the ventral hyoid arch.
Term resides in TAO.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:0011615
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Pharyngeal arch cartilage that is median and is the anterior-most cartilage of the ventral hyoid arch.
TAO:curator
obsolete basihyal condensation
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
obsolete ventral hyoid arch
Term resides in TAO.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:0011153
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
obsolete chordablast
CL:0007008
Epithelial cell that is large, vacuolated, and part of the notochord.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Epithelial cell that is large, vacuolated, and part of the notochord.
VSAO:curator
mineralized extracellular matrix
Extracellular matrix that is mineralized.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Extracellular matrix that is mineralized.
PSPUB:0000170
obsolete proteinaceous extracellular matrix
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus. [GOC:mtg_sensu, ISBN:0198547684].
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus. [GOC:mtg_sensu, ISBN:0198547684].
GO:[GOC:mtg_sensu, ISBN:0198547684]
GO_REF:0000034
VSAO:curator
obsolete extracellular matrix
Combination of protein fibers, ground substance and tissue fluid; typically has embedded cells.
ECM
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
ECM
VSAO:curator
Combination of protein fibers, ground substance and tissue fluid; typically has embedded cells.
PSPUB:0000170
obsolete intercalar
Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.
Term resides in TAO.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
UBERON:2000474
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal.
TAO:curator
integumentary papilla
Odontogenic papilla that is located in the integument.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
scale papilla
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Odontogenic papilla that is located in the integument.
PSPUB:0000170
VSAO:curator
scale papilla
oropharyngeal papilla
Odontogenic papilla located along the jaws or pharyngeal skeleton.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
oropharyngeal dental papilla
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Odontogenic papilla located along the jaws or pharyngeal skeleton.
PSPUB:0000170
VSAO:curator
oropharyngeal dental papilla
obsolete preameloblast
CL:0007000
Skeletogenic cell that has the potential to develop into an ameloblast.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletogenic cell that has the potential to develop into an ameloblast.
VSAO:curator
obsolete chordoblast
CL:0007008
Skeletogenic cell that is derived from the notochordal mesoderm and produces notochordal tissue (and cartilage tissue in some taxa).
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletogenic cell that is derived from the notochordal mesoderm and produces notochordal tissue (and cartilage tissue in some taxa).
VSAO:curator
obsolete preodontoblast
CL:0007003
Skeletogenic cell that has the potential to form an odontoblast, deposits predentine, and arises from a neural crest cell.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletogenic cell that has the potential to form an odontoblast, deposits predentine, and arises from a neural crest cell.
VSAO:curator
obsolete precementoblast
CL:0007002
Skeletogenic cell that has the potential to develop into a cementoblast.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletogenic cell that has the potential to develop into a cementoblast.
VSAO:curator
obsolete prechondroblast
CL:0007009
Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells.
VSAO:curator
obsolete preosteoblast
CL:0007010
Skeletogenic cell that has the potential to transform into an osteoblast, and develops from neural crest or mesodermal cells.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletogenic cell that has the potential to transform into an osteoblast, and develops from neural crest or mesodermal cells.
VSAO:curator
lepidosteoid scale
Multi-layer ganoid scale composed of ganoine and cellular bone.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Multi-layer ganoid scale composed of ganoine and cellular bone.
PSPUB:0000170
ganoid scale
Thick, rhomboid-shaped integumentary skeletal element composed of multiple tissues including ganoine and bone.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
PSPUB:0000170
Thick, rhomboid-shaped integumentary skeletal element composed of multiple tissues including ganoine and bone.
vacuolated notochordal tissue
Connective tissue that is matrix-poor with large number of vacuolated cells.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
notochord proper
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
true
true
VSAO:curator
notochord proper
Connective tissue that is matrix-poor with large number of vacuolated cells.
PSPUB:0000170
polypteroid scale
Multi-tissue structure composed of ganoine, dentine, elasmodine and cellular bone.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
polypterid scale
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Multi-tissue structure composed of ganoine, dentine, elasmodine and cellular bone.
PSPUB:0000170
VSAO:curator
polypterid scale
avascular GAG-rich matrix
Proteinaceous extracellular matrix that is avascular and consists primarily of glycosaminoglycans.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
avascular glycosaminoglycan-rich matrix
cartilage matrix
cartilage-like matrix
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:curator
avascular glycosaminoglycan-rich matrix
VSAO:curator
cartilage matrix
PSPUB:0000170
Proteinaceous extracellular matrix that is avascular and consists primarily of glycosaminoglycans.
VSAO:curator
cartilage-like matrix
elasmoid scale
Multi-tissue integumentary element composed dentine, elasmodine, and hypermineralized tissue.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Multi-tissue integumentary element composed dentine, elasmodine, and hypermineralized tissue.
PSPUB:0000170
palaeoniscoid scale
Multi-tissue structure composed of ganoine, dentine and bone; not known in extant taxa.
Palaeoniscus-type scale
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Palaeoniscus-type scale
VSAO:curator
Multi-tissue structure composed of ganoine, dentine and bone; not known in extant taxa.
PSPUB:0000170
non-mineralized chondroid tissue
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
chondroid tissue
Skeletal tissue that is mineralized, has large chondrocyte-like cells, sparse extracellular matrix, and minimal perichondrium; develops from non-mineralized chondroid tissue.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
chondroid bone tissue
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:curator
chondroid bone tissue
PSPUB:0000170
Skeletal tissue that is mineralized, has large chondrocyte-like cells, sparse extracellular matrix, and minimal perichondrium; develops from non-mineralized chondroid tissue.
TAO:curator
keratin-based scale
Fold or elevation of the epidermis rich in keratin proteins; possibly calcified but does not contain skeletal elements.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Fold or elevation of the epidermis rich in keratin proteins; possibly calcified but does not contain skeletal elements.
PSPUB:0000170
cosmoid scale
Multi-tissue integumentary element composed of enamel or enameloid, dentine and lamellar bone, and characterized by pore-canal system.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Multi-tissue integumentary element composed of enamel or enameloid, dentine and lamellar bone, and characterized by pore-canal system.
PSPUB:0000170
secondary cartilage tissue
Cartilage tissue that is part of the exoskeleton, deposited adjacent to bone after bone formation.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Cartilage tissue that is part of the exoskeleton, deposited adjacent to bone after bone formation.
PSPUB:0000170
cosmine
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
cosmoid scale tissue
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
PSPUB:0000170
cosmoid scale tissue
mineralized cartilage tissue
Cartilage tissue that is mineralized.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Cartilage tissue that is mineralized.
PSPUB:0000170
integumentary skeleton
Skeletal subdivision that is part of the extra-oral dermal skeletal system that develops and remains invested within the integument, primarily the dermis.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
PSPUB:0000170
Skeletal subdivision that is part of the extra-oral dermal skeletal system that develops and remains invested within the integument, primarily the dermis.
obsolete non-terminally differentiated odontoblast
CL:00007012
Odontoblast that non-terminally differentiated, located in the odontogenic papilla and dentine tissue, and transforms from a odontoblast cell.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Odontoblast that non-terminally differentiated, located in the odontogenic papilla and dentine tissue, and transforms from a odontoblast cell.
PSPUB:0000170
obsolete terminally differentiated odontoblast
CL:00007013
Odontoblast that is terminally differentiated and derived from an odontogenic papilla and associated with dentine.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Odontoblast that is terminally differentiated and derived from an odontogenic papilla and associated with dentine.
VSAO:curator
orthodentine
Odontoid tissue that typically contains tubules and is acellular.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Odontoid tissue that typically contains tubules and is acellular.
PSPUB:0000170
osteodentine
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
ganoine
Odontogenic tissue that is hypermineralized acellular, noncollagenous, covered by an epidermis and often deposited in multiple layers.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
true
Odontogenic tissue that is hypermineralized acellular, noncollagenous, covered by an epidermis and often deposited in multiple layers.
PSPUB:0000170
limiting layer of elasmoid scale
Hypermineralized tissue lacking collagen (except Sharpey's fibres), developing in close proximity to the basal cells of the overlying epithelium.
Not clear if this layer is acellular, making a tissue type for now.
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
true
true
Hypermineralized tissue lacking collagen (except Sharpey's fibres), developing in close proximity to the basal cells of the overlying epithelium.
PSPUB:0000170
vasodentine
Dentine tissue that lacks dentine tubules and that is penetrated by blood capillaries.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vascular dentine
vertebrate_skeletal_anatomy_curators
Dentine tissue that lacks dentine tubules and that is penetrated by blood capillaries.
PSPUB:0000170
VSAO:curator
vascular dentine
elasmodine
Odontogenic tissue that consists of multiple layers of collagen fibers organized in orthogonal or twisted arrangements.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
true
Odontogenic tissue that consists of multiple layers of collagen fibers organized in orthogonal or twisted arrangements.
PSPUB:0000170
non-mineralized hyaline cartilage tissue
Hyaline cartilage tissue that is not mineralized.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Hyaline cartilage tissue that is not mineralized.
PSPUB:0000170
mineralized hyaline cartilage tissue
Hyaline cartilage tissue that is mineralized.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Hyaline cartilage tissue that is mineralized.
PSPUB:0000170
mineralized bone tissue
Bone tissue mineralized with hydroxyapatite.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Bone tissue mineralized with hydroxyapatite.
PSPUB:0000170
obsolete terminally differentiated osteoblast
CL:0001039
Osteoblast that is terminally differentiated, located adjacent to acellular or cellular bone tissue within periosteum, and is capable of mineralizing the matrix.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Osteoblast that is terminally differentiated, located adjacent to acellular or cellular bone tissue within periosteum, and is capable of mineralizing the matrix.
VSAO:curator
obsolete non-terminally differentiated osteoblast
CL:0001040
Osteoblast that is non-terminally differentiated and located in cellular bone tissue or under the periosteum in acellular bone.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Osteoblast that is non-terminally differentiated and located in cellular bone tissue or under the periosteum in acellular bone.
VSAO:curator
cellular bone tissue
Mineralized bone tissue that always includes non-terminally differentiated osteoblasts and osteocytes.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Mineralized bone tissue that always includes non-terminally differentiated osteoblasts and osteocytes.
PSPUB:0000170
non-mineralized avascular GAG-rich matrix
Avascular GAG-rich matrix that is not mineralized.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
non-mineralized cartilage
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Avascular GAG-rich matrix that is not mineralized.
PSPUB:0000170
VSAO:curator
non-mineralized cartilage
mineralized avascular GAG-rich matrix
Avascular GAG-rich matrix that is mineralized.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Avascular GAG-rich matrix that is mineralized.
PSPUB:0000170
acellular bone tissue
Mineralized bone tissue that has terminally differentiated osteoblasts but lacks osteocytes.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Mineralized bone tissue that has terminally differentiated osteoblasts but lacks osteocytes.
PSPUB:0000170
odontode tissue
Skeletal tissue that is avascular tubular mineralized matrix, primarily made of dentine that is deposited by odontoblasts that are excluded from the matrix; develops from pre-dentine tissue.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dental tissue
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:curator
dental tissue
PSPUB:0000170
Skeletal tissue that is avascular tubular mineralized matrix, primarily made of dentine that is deposited by odontoblasts that are excluded from the matrix; develops from pre-dentine tissue.
ossified tendon
Sesamoid that develops within a tendon, distal to an articulation or joint.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
intratendonous ossification
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:0000134
intratendonous ossification
PSPUB:0000169
Sesamoid that develops within a tendon, distal to an articulation or joint.
obsolete direct ossification
GO:0036072
Ossification that does not require the replacement of pre-existing tissues, most often a cartilaginous model.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Ossification that does not require the replacement of pre-existing tissues, most often a cartilaginous model.
PSPUB:0000170
ligamentous replacement element
Replacement element that forms as a replacement of a ligament.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
PSPUB:0000170
Replacement element that forms as a replacement of a ligament.
obsolete replacement ossification
GO:0036075
Ossification that requires the replacement of a pre-existing tissue prior to bone tissue formation.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
indirect ossification
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Ossification that requires the replacement of a pre-existing tissue prior to bone tissue formation.
VSAO:curator
VSAO:0000140
indirect ossification
obsolete intramembranous ossification
Direct ossification that occurs within mesenchyme with the formation of an osteogenic condensation not associated with a perichondrium.
GO:0001957
GO:0001957
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Direct ossification that occurs within mesenchyme with the formation of an osteogenic condensation not associated with a perichondrium.
VSAO:curator
obsolete metaplastic ossification
Direct ossification in which transformation of the pre-existing tissue occurs without dedifferentiation of cells or reinitiation of cell division; direct transformation of a non-bone tissue into a bone tissue.
GO:0036074
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
metaplasia
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:0000142
metaplasia
Direct ossification in which transformation of the pre-existing tissue occurs without dedifferentiation of cells or reinitiation of cell division; direct transformation of a non-bone tissue into a bone tissue.
VSAO:curator
obsolete endochondral ossification
GO:0001958
Replacement ossification wherein bone tissue replaces cartilage.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Replacement ossification wherein bone tissue replaces cartilage.
VSAO:curator
obsolete perichondral ossification
GO:0036073
Intramembranous ossification on the surface of a cartilage element as the perichondrium becomes a periosteum, without replacement of cartilage.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
true
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Intramembranous ossification on the surface of a cartilage element as the perichondrium becomes a periosteum, without replacement of cartilage.
VSAO:curator
transient cartilaginous element
Chondrogenic element that is composed of cartilage during development and has the potential to become replaced by another tissue.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
endochondral replacement cartilage
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Chondrogenic element that is composed of cartilage during development and has the potential to become replaced by another tissue.
PSPUB:0000170
VSAO:0000146
endochondral replacement cartilage
ossified ligament
Sesamoid that develops within a ligament, distal to an articulation or joint.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
GO_REF:0000034
PSPUB:0000169
Sesamoid that develops within a ligament, distal to an articulation or joint.
anocleithrum
Dermal bone of pectoral girdle that is dorsal to and articulates with the cleithrum.
In sarcopterygians; analogous in position to postcleithrum in actinopterygians.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anocleithra
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
true
Dermal bone of pectoral girdle that is dorsal to and articulates with the cleithrum.
VSAO:curator
VSAO:0000160
anocleithra
median fin
Fin that is an unpaired fin located in the sagittal plane of the organism.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
nageoire impaire
périssoptérygie
PSPUB:0000140
périssoptérygie
PSPUB:0000164
nageoire impaire
Fin that is an unpaired fin located in the sagittal plane of the organism.
TAO:curator
anal fin
Median fin that is located posterior to the anus.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
nageoire anale
proctoptère
proctoptérygie
PAPUB:0000142
PSPUB:0000140
proctoptérygie
Median fin that is located posterior to the anus.
TAO:curator
PSPUB:0000136
proctoptère
PSPUB:0000164
nageoire anale
caudal fin
The caudal fin is the most posterior median fin. It is composed of a complex of modified centra and modified neural and hemal arches and spines.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
tail
tail fin
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
nageoire caudale
uroptère
uroptérygie
VSAO:0000164
tail fin
VSAO:0000164
tail
PSPUB:0000164
nageoire caudale
PSPUB:0000140
uroptérygie
Phenoscape:PM
The caudal fin is the most posterior median fin. It is composed of a complex of modified centra and modified neural and hemal arches and spines.
PSPUB:0000135
uroptère
anal fin skeleton
Median fin skeleton that is located posterior to the anus.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Median fin skeleton that is located posterior to the anus.
TAO:curator
caudal fin skeleton
Median fin skeleton supporting the caudal fin.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Median fin skeleton supporting the caudal fin.
TAO:curator
dorsal fin skeleton
Median fin skeleton located on the dorsal surface of the organism.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Median fin skeleton located on the dorsal surface of the organism.
TAO:curator
median fin skeleton
Postcranial axial skeleton that is unpaired and located on the sagittal plane of the organism.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
axial fin skeleton
uberon/phenoscape-anatomy
unpaired fin skeleton
vertebrate_skeletal_anatomy_curators
VSAO:0000170
unpaired fin skeleton
Postcranial axial skeleton that is unpaired and located on the sagittal plane of the organism.
TAO:curator
VSAO:0000170
axial fin skeleton
scapular complex
A scapular complex is described in placoderms (Goujet and Young, 1995).
Skeletal subdivision of dermal bones that may include the anterolateral plate (AL), the spinal process (Sp), and anteroventral plate (AV) and other dermal bones that are part of the pectoral girdle.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Skeletal subdivision of dermal bones that may include the anterolateral plate (AL), the spinal process (Sp), and anteroventral plate (AV) and other dermal bones that are part of the pectoral girdle.
VSAO:curator
lepidotrichium
Dermal bone that is rod-like, formed and usually contained in a fin membrane, and jointed to or adjacent to distal radials. Lepidotrichia are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
fin ray
VSAO:0000172
fin ray
true
Dermal bone that is rod-like, formed and usually contained in a fin membrane, and jointed to or adjacent to distal radials. Lepidotrichia are formed from paired hemitrichia surrounding actinotrichia. There are usually two more lepidotrichia than distal radials.
TAO:curator
pelvic fin lepidotrichium
Lepidotrichium that is part of the pelvic fin skeleton.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pelvic fin lepidotrichia
pelvic fin ray
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:0000173
pelvic fin ray
true
Lepidotrichium that is part of the pelvic fin skeleton.
TAO:curator
VSAO:0000173
pelvic fin lepidotrichia
true
caudal fin lepidotrichium
Lepidotrichium that is part of the caudal fin skeleton.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
caudal fin ray
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Lepidotrichium that is part of the caudal fin skeleton.
TAO:curator
VSAO:0000174
caudal fin ray
pectoral fin lepidotrichium
Each pectoral lepidotrichium may be unsegmented (e.g., spine), segmented but unbranched (e.g., leading ray) or segmented and branched. Definition of lepidotrichium by Schultze and Arratia (1989: 217). For additional information about lepidotrichia see Arratia et al. 2001 and Arratia 2008.
Lepidotrichium that is part of the pectoral fin skeleton.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
pectoral fin lepidotrichia
pectoral fin ray
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:0000175
pectoral fin ray
VSAO:0000175
pectoral fin lepidotrichia
true
Lepidotrichium that is part of the pectoral fin skeleton.
TAO:curator
true
anal fin lepidotrichium
Lepidotrichium that is part of the anal fin skeleton.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
anal fin lepidotrichia
anal fin ray
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
Lepidotrichium that is part of the anal fin skeleton.
TAO:curator
VSAO:0000176
anal fin ray
VSAO:0000176
anal fin lepidotrichia
dorsal fin lepidotrichium
Lepidotrichium that is part of the dorsal fin skeleton.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
dorsal fin lepidotrichia
dorsal fin ray
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
VSAO:0000177
dorsal fin ray
true
VSAO:0000177
dorsal fin lepidotrichia
Lepidotrichium that is part of the dorsal fin skeleton.
TAO:curator
suprabranchial fin
Paired fin that is a bilaterally paired anterior outgrowth located high on the side of the animal, not far behind the orbit, with the posterior extremity corresponding with the expected posterior end of the branchial region.
Suprabranchial fins are anterior outgrowths from the cephalothorax of thelodonts. Typically scale covered. They do not appear to contain skeletal tissues or elements.
This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon
uberon/phenoscape-anatomy
vertebrate_skeletal_anatomy_curators
PSPUB:0000172
Paired fin that is a bilaterally paired anterior outgrowth located high on the side of the animal, not far behind the orbit, with the posterior extremity corresponding with the expected posterior end of the branchial region.
skeletal element projection
Anatomical projection that is composed of bone or cartilage tissue.
obsolete astragalus-calcaneum unit
Anatomical cluster that is an osteological unit consisting of the astragalus and calcaneum.
Nizar Ibrahim
TO DO: add astragalus after it has been added.
true
Anatomical cluster that is an osteological unit consisting of the astragalus and calcaneum.
PHENOSCAPE: ni
obsolete ectepicondylar flange
Flange on the dorsal part of the humerus, associated with extensor musculature of the forelimb (manus. carpus).
Nizar Ibrahim
true
Flange on the dorsal part of the humerus, associated with extensor musculature of the forelimb (manus. carpus).
PHENOSCAPE: ni
articular surface
Anatomical surface that is part of a skeletal element and articulates with another skeletal element. [NI]
Nizar Ibrahim
Not necessarily part of a joint.
ischial peduncle
Bony projection (peduncle) that is located on the posterior portion of the ilium, posterior to the acetabulum.
Nizar Ibrahim
true
true
second phalanx
Second most proximal phalanx in manual or pedal digits.
Consider merging with 'intermediate phalanx'
parasternal process
NI
Posterior projection of the interclavicle that extends betwen and sometimes beyond the clavicles. [AD]
pectoral articular facet
Facet of scapulocoracoid with which the pectoral fin radial(s) articulates. Facet of scapulocoracoid with which the pectoral fin radial(s) articulates. Based on Goujet and Young (1995). [PHENOSCAPE: pm]
NI
Should be part of some joint.
pedal claws
Claws on the pes.
NI
true
pedal digit 7 phalanx
NI
Phalanx of the 7th pedal digit. [AD]
true
post-glenoid process
Distinct notch ventral to the glenoid. [NI]
Fix def'n
NI
true
postacetabular buttress
A bony process at the distal margin of the acetabulum formed by the ischium and/or the ischial peduncle of the ilium. [AD]
NI
true
postacetabular zone
NI
Region of the ilium posterior and dorsal to the acetabulum. [AD]
true
postcoracoid
NI
The posterior of the two coracoid elements found in basal tetrapods. Corresponds directly to the "coracoid" of synapsids. [AD]
posterior dorsal fin
Dorsal fin located posterior to the anterior dorsal fin. [WD]
NI
obsolete posterior iliac process
NI
Posterior most of the two "double heads" of the blade of the ilium in some take. Distinct and separate for the dorsal iliac process. [AD]
true
posterior process of ilium
A posteriorly directed bony projection from the ilium that is the attachment site of the iliofibularis muscle (see Sumida, 1997). [AD]
NI
posterior iliac process
true
true
medial blade of ilium
TA Dececchi
The medial surface of the iliac blade. Origin site of the iliofemoralis internus muscle and its homologues.
The medial surface of the iliac blade. Origin site of the iliofemoralis internus muscle and its homologues.
PHENOSCAPE:ad
true
postpubis
In some non-avian reptile this terminology refers to a distinct rear facing process of the pubis. In avians and some closely related theropod taxa this term is used to denote the pubis itself which has been rotated to face backwards.
The region of the pubis posterior to the acetabulum.
phenoscape:ad
true
true
coracoid plate
A.Dececchi
Broad, convex expansion of the coracoid bone below the level of the glenoid. Based on Romer 1956
archipterygial fin
A type of pectoral fin in which the endoskeletal elements have a main axis that runs through the center of the fin. This creates a bilateraly symetrical fin. (Modified from Kardong 2012).
A.Dececchi
Is homologous to the tetrapod limb.
intertrochanteric fossa
A.Dececchi
Depression on the ventreal side of the femoral head. Associated with the pubioischiofemoralis externus muscle.
obsolete postbranchial lamina
A.Dececchi
Medial facing projection or surface on the anterior ( cranial) region of the cleithrum that is often textured or denticled. This process has two primary functions: 1) its shape enhances the vertical strength of the cleithrum and 2) it forms the edge of the gill chamber and helps to direct water after it has passed over the gills (modified from Clack 2012).
true
infraglenoid buttress
A.Dececchi
An anatomical projection ventral to the glenoid fossa on the scapulocoracoid that abuts on the cliethrum (if present).
Can exist in taxa without a cleithrum.
true
transverse pelvic ridge
The transverse pelvic ridge is a short crest directly anterior to, and not extending posterior to, the prominent supra-acetabular buttress from Pawley and Warren 2006.
true
inter-clavicle joint
AD
Joint that articulates left and right clavicles.
interclavicle joint
PHENOSCAPE: wd
true
hypochordal lepidotrichium
AD
Lepidotrichium located ventral to the notochord
PHENOSCAPE:wd
ventral humeral ridge
A distinct bony ridge on ventralsurface of the humeral shaft that corresponds to the attachment site of the pectoralis muscle.
AD
PHENOSCAPE:ad
pectoral process
true
true
pedal centrale
A centrale found in the pes.
AD
PHENOSCAPE:AD
navicular bone of pes
ectepicondylar flange
AD
Flange present of the distal region of the humerus, associated with extensor musculature of forelimb.
PHENOSCAPE:ni
true
true
flexor surface
AD
PHENOSCAPE:ni
Surface of a long bone that posses the flexor muscle attachment sites.
lateral tuber of ulna
AD
PHENOSCAPE: ni
Projection on the lateral side of proximal part of the ulna.
true
true
inner digits of foot
AD
In most tetrapods this corresponds to digits II-IV, but the exact identiy of digits in this region varies taxonomically based on digit numbering.
PHENOSCAPE:ad
The medial most digits of the pes.
postbranchial lamina
AD
Medial facing projection or surface on the anterior ( cranial) region of the cleithrum that is often textured or denticled. This process has two primary functions: 1) its shape enhances the vertical strength of the cleithrum and 2) it forms the edge of the gill chamber and helps to direct water after it has passed over the gills (modified from Clack 2012)
true
true
true
true
obsolete infraglenoid buttress
AD
An anatomical projection venteral to the glenoid fossa on the scapulocoracoid that abuts on the cliethrum.
PHENOSCAPE:ad
true
calcaneal tuber
AD
An enlargement of the distal region of the calcaneum that corresponds to the attachment site for the foot extensor muscles.
PHENOSCAPE:ad
true
true
preacetabular process
AD
PHENOSCAPE:ad
Process on ilium located anteriorly to acetabulum.
true
true
suprascapular fossa
AD
Fossa on the medial surface on the scapula above the glenoid.
PHENOSCAPE:ad
astragalus-calcaneum unit
NI
Osteological unit consisting of the astragalus and calcaneum.
PHENOSCAPE:NI
true
extracleithrum
AD
Narrow bone that lies ventral to the level of insertion fo the pectoral fin and is sutured to the posterior edges of both the clavicle and cleithrum. Based on Forey 1998.
The presence of this bone is a synapomorphy of coelacanth fishes.
anterior dorsal fin
A dorsal fin located anterior to posterior dorsal fin. [WD]
AD
obsolete suprascapular fossa
AD
Fossa located on the medial surface of the scapula above the glenoid
true
ascending process of the astragalus
AD
Flattened process of the dorsl surface of the astragalus which contacts the tibia anteriorly. [NI]
PHENOSCAPE:NI
true
true
supraglenoid foramen
Foramen that perforates supraglenoid buttress.
ad
supraglenoid buttress
A bony projection dorsal to the glenoid articulation on the scapulocoracoid.
AD
In basal tetrapodomorphs this structure braces the scapula on the cleithrum, but this function is lost in derived tetrapods.
true
adductor blade
A prominent ridge in basal tetrapods on the ventral side of the femur that includes the fourth trochater, internal trochanter and the adductor crest (based on Coates, 1996). [AD]
AD
true
true
adductor crest
A bony crest on venteral side of femur that is the attachment site for the adductor muscles. [AD]
AD
true
true
antitrochanter
AD
Raised surface at the posterior portion of the acetabulum (see Nesbitt, 2011). [NI]
true
caudalipuboischiotibialis
AD
Muscle that is associated with tail flexion. Orginates on one of the first post sacral vertebrae posteriorly and inserts on the posterior edge of the m.puboischiotibialis. (modified from Duellman and Trueb 1994)
To Do: add attachment site terms to ext
clavicle blade
Ad
Expanded and flattened ventral region of clavicle bone.
true
true
cleithrum head
AD
Expanded dorsal region of the cleithrum.
true
true
true
cnemial crest
AD
Longitudnal bony ridge on tibia, attachment site of the major extensor muscle of the hind limb.
true
true
internal trochanter
A boney projection on the internal diaphysis of the femur anterior or medial to the intertrochanteric fossa, below the femoral head. Muscle attachment site for ventral muscle mass notably the puboischiofemoralis externus. Modified from Romer 1956
AD
true
true
supinator process
A bony process that corresponds to the attachment site for the forelimb supinator muscles in tetrapods, distal to the deltopectoral crest and anterior to the radial condyle.
AD
true
true
subscapular fossa
A marked depression on the medial side of the scapula blade, often opposite the glenoid region.
AD
supraacetabular buttress
A boney protuberance dorsal to the acetabulum on the ilium, confluent with the supraacetabular crest (when present). Acts as a bone brace to prevent excessive femoral abduction and the origin site for part of the M. iliofemoralis.
AD
true
true
acrocoracoid process
AD
Anatomical process located in the proximal region of the coracoid in avian theropods, that is hook-shaped. [NI]
true
aponeurosis palmaris
AD
The palmar aponeurosis is a fibrotendinous complex that functions as the tendinous extension of the palmaris longus, when present, and as a strong stabilizing structure for the palmar skin of the hand. It has five longitudinal slips that project into the base of each digit and a deeper transverse portion that crosses the palm at the proximal end of the metacarpals bones (from Wikipedia).
brevis shelf
AD
Anatomical projection on the ilium, anchoring caudal muscles.
true
true
brevis fossa
AD
Fossa located on the brevis shelf.
articular surface for the calcaneum on the astragalus
AD
Contact surface between the calcaneum and the astragalus located on the astragalus.
articular surface for the astragalus on the calcaneum
AD
Contact surface between the calcaneum and the astragalus located on the calcaneum.
astragalo-calcaneal canal
AD
The astragalo-calcaneal canal forms a foramen between the articulated astragalus and calcaneum when the canal is ossified (Nesbitt, 2011).
attachment site
AD
Morphological struture denoting the exent of an attachment site for a soft tissue on a skeletal element.
bicipital crest
Anatomical projection that is an expansion on the proximal region of the humerus.
Origin of the aponeursis of humeral head of the M. biceps brachii. From Bamuel et al. 1993
crista bicipitalis
crista tuberculi majoris
true
true
cartilago sesamoides
A sesamoid found in the found in the ligamentum calcanei of a wide variety of frogs. (based on Nussbaum, R. A. 1982
AD
cotyla
A cup shaped articular surface on a bone.
AD
cotyloid notch
A notch or opening in the ventral part of the acetabular rim.
AD
crista tibiofibularis
AD
Tuberosity on the posterior surface of the lateral femoral condyle
true
true
diphycercal tail
An internally and externally symmetrical tail (caudal) fin
In Dipnoi, may be secondarily acquired from the homocercal condition by loss of the real caudal fin and the gaining of a new one from dorsal and anal elements, e.g. in Gadidae. http://www.briancoad.com/Complete%20Dictionary%20latest%20version.htm
heterocercal tail
AD
Elasmobranchii, Acipenseridae, Polyodontidae and in many larval Teleostomi. May also be used for an asymmetrical caudal fin but with epicercal defining upper lobe longer and hypocercal the lower lobe longer. http://www.briancoad.com/dictionary/DicPics/heterorercal.htm
Type of tail (caudal) fin in which the vertebral column turns upwards into the upper lobe which is longer than the lower. Asymmetrical externally as well as internally.
homocercal tail
AD
Found in most Teleostei. http://www.briancoad.com/dictionary/DicPics/homocercal2.htm
Type of tail fin in which the vertebrae generally turn upward at the hind end of the column, but which is externally symmetrical. The fin rays of the caudal are supported by hypaxial elements
hypocercal tail
AD
Type of tail fin where the lower lobe is the longer and is supported by the vertebral column. Asymmetrical externally as well as internally
found in Pteraspides (fossil).
ectepicondylar foramen
AD
Formen present on the ectepicondyle of the humerus.
true
true
epicercal tail
AD
Osteostracans are the only jawless vertebrates that share with gnathostomes an epicercal tail.
Tail fin in which the the caudal part of the notochord tapers posterodorsally. Based on Pradel et al. 2007
epichordal lepidotrichium
AD
lepidotrichium located upon or above the notochord.
ectocondylar tubercle
AD
Posteriorly projecting bony tubercle that is located proximal to the lateral condyle of the femur.
true
true
prepubic element
A small plate of cartilage synchondrotically united with the pubis. Modified from Baez and Harrison 2005.
AD
sternal keel
AD
An enlarged ossified keel is found in most, but not all, volant birds.
The vertical plate of bone or cartilage attached to the median line of the sternum. Modified from Baumel et al. 1993
carina
carina sterni
crista sterni
true
median fin spine
AD
Fin spine that is part of a median fin.
fin spine
A spine that is part of some fin.
AD
trunk armor pectoral fenestra
AD
An opening in the dermal armour of basal gnathostomes that encloses the pectoral fins. (modified from Young 2010).
Disjoint from "pectoral fenestra" of Amphibians (AAO_0000779).
trunk armour pectoral fenestra
obsolete posterior iliac process
AD
Distinct posterior most of the two "double heads" of the blade of the ilium.
true
clavicular facet
A notch for the articulation of the clavicle on other girdle elements.
AD
dorsal iliac process
AD
It spresences gives the ilium a "double headed" appearence.
Posteriordorsal process of the ilium.
true
true
fibular crest
A bony projection on the lateral side of the tibia, allowing contact between the later and the fibula.
AD
true
true
hypocleideum
AD
Zone of bone organ located on the flat ventral side of the distal region of the furcula, serving as attachment region for pectoral muscles.
true
true
true
postaxial centrale
AD
Centrale in the postaxial region of the mesopodium.
The paried limbs have a main axis running proximodistally trough the stylopodiam element (humerus/femur). from the zeugopodium distally elements can be divided into preaxial (on the radius/tibia side) and postaxial (ulna/fibula) sides. The exact orientation of these axises vary depending on the orientation of the limb in a neutral position.
preaxial centrale
AD
Centrale in the preaxial side of the mesopodium.
The paried limbs have a main axis running proximodistally trough the stylopodiam element (humerus/femur). from the zeugopodium distally elements can be divided into preaxial (on the radius/tibia side) and postaxial (ulna/fibula) sides. The exact orientation of these axises vary depending on the orientation of the limb in a neutral position.
obsolete glenoid head of scapula
AD
The scapula's contribution to the glenoid fossa.
replaced by 'pars glenoidalis of scapula'
true
iliac neck
A constricted region of the ilium which is dorsal to the acetabulular region. Prior to the expansion of the iliac blade.
AD
true
iliac peduncle
AD
Bony projection that is part of the dorsal surface of the ischim, where it articulates with the ilium.
true
true
iliac peduncle of the pubis
AD
Bony projection that is part of the dorsal surface of the pubis where it meets the ilium.
true
true
fibular facet of the calcaneum
AD
Articular surface on calcaneum for the fibula.
fibular facet of the astragalus
AD
Articular surface on the astragalus for the fibula.
ethomosphenoid region
AD
Region consisitng of the ethmoid and sphenoid bones.
true
true
flexor tubercle of ungual
AD
Eminence on the proximo-dorsal surface of the ungual, for attachment of flexor muscles.
true
true
true
guard scale
AD
Need definition
inner digits of hand
In most taxa this is digits II-IV, but this varies based on the number of digits and thier identity in the taxa examined.
The medial most digit of the manus skeleton.
infraspinous process
AD
Process on infraspinous (region below the spine) of scapula.
true
intercondylar fossa
AD
The deep fossa between the femoral condyles in which the cruciate ligaments are attached. From Medilexicon.com
intermediate spine
Ad
Spine ventrally located on the body and not part of the pectoral, pelvic or anal fins.
ischial foot
Ad
Expansion of the distal region of the ischium.
lateral extrascapular
AD
The most lateral of the paired series of extrascapular bones and is the bone where the intersection of the otic, postotic and extrascapular or supratemporal canals occur.
latissimus dorsi process
A bony process on the dorsal side of the proximal region of the humerus which corresponds to the insertion site of the Latissimus dorsi muscle.
AD
m.scapulotriceps
AD
Muscle that represents one branch of the larger triceps brachii, origination site near the glenoid fossa on the scapula.
medial dorsal plate
AD
Dermal armour plate that is situated behind the head and constitute the dorsal most portion of the dermal shoulder girdle. Modified from Brazeau 2009, Young 2010
Present in some basal gnathostomes.
median extrascapular
AD
The medial of the the paired series of extrascapular bones which carries the extrascapular or supratemporal canal.
metacarpal extensor pit
AD
Pits located on the proximodorsal part of metacarpals denoting the attachemnt sites for ligaments.
nerve foramen
AD
Opening and/or passageway for nerve(s) in bone.
muscle scar
AD
An distinct region on a skeletal elementt that demarcates the attachment area of a muscle or tendon. Often associated with rugosity or tubercles.
While this term is applicable to both vertebrates and invertebrates, the qualities used to demarcate muscle attachment area's between the two groups may not be identical.
obturator process of ischium
AD
In birds the pubio-ischio-femoralis externus is sometimes called the M.oburatorius lateralis and medialis.
Process located on the ventral shaft of the ischium that denotes the attachment site of the pubio-ischio-femoralis externus.
true
true
outer digit of hand
In most taxa this is digits I and V, but this varies based on the number of digits in the manus
AD
The flanking digit of the manus.
outer digits of pes
In most taxa this is digits I and V, but this varies based on the number of digits in the pes.
AD
The flanking digit of the pes.
prepectoral spine
AD
Fin spine located anterior to the pectoral fin
prepelvic fin spine
AD
Fin spine located anterior to the pelvic fin and posterior to the pectoral fin.
prepectoral space
A triangular, anteroventrally facing area developed between the preaxial margin of the humerus and the proximal limb of the ventral humeral ridge. Based on Callier et al. 2009
AD
true
true
predorsal scute
AD
prepubic process
AD
Elongate process forming the anteriormost part of the pubis.
true
true
presupracleithrum
AD
An skeletal element of the upper pectoral girdle overlapped by the opercular and posttemporal bones.
pteroid
AD
Slender bone connected to the carpus in pterosaurs. The bone, which may have pointed forward, supports the propatagium, a membrane located between the carpus and pectoral region.
This structure is unique to pterosaurs. There is debate wherther this structure is derived from metacarpal I, the carpal bones or is a a novel bone. See Unwin et al. 1996
pubic boot
AD
Anteroposterior expansion of the distal region of the pubis.
true
pubic peduncle
AD
Bony projection on the anterior portion of the ilium, anterior to the acetabulum that articulates with the pubis.
true
true
pubis-ischium contact
AD
Contact zone between the pubis and the ischium.
true
puboischiadic plate
A broad expnase of bone incorperating both the pubis and the ischium. Origin site for ventral limb muscle including the pubioishciofemoralis externus. Modified from Romer 1956
AD
true
puboischiotibialis
AD
Originates from the puboischaidic plate and inserts on the hindlimb. Acts to adduct the hindlimb. Is anterior to cloacal gland in males. Modified from De luliis and Pulera.
pubotibialis
AD
Originates in on the pubic cartillage and inserts on the tibia, acts to adduct the hindlimb. Modified from De luliis and Pulera.
scapular process
AD
The dorsal extension of the scapulocoracoid above the level of the glenoid region in basal gnathostomes. Modified from Brazeau 2009.
true
sternal trabecula
AD
Anatomical projections that are elongate processes in the mid and posterior regions of the sternum.
true
true
supraacetabular crest
AD
Anatomical projection (crest) located dorsaly to the acetabulum.
true
true
supraacetabular rim
AD
Bony rim that is part of the supraacetabular region.
true
true
suprascapula foramen
AD
The route through which structures pass between the base of the neck and the posterior scapular region. It is formed by the suprascapular notch of the scapula and the superior transverse scapular ligament. From http://medical-dictionary.thefreedictionary.com/suprascapular+foramen
true
synarcual region of vertebral column
"The synarcual is a structure incorporating the anterior vertebrae of the axial skeleton and occurs in vertebrate taxa such as the fossil group Placodermi and the Chondrichthyes (Holocephali, Batoidea)" DOI 10.1007/s00435-012-0169-9
Series of fused cervical vertebrae or vertebral elements. Based on Jeffrey C. Carrier. Biology of Sharks and Their Relatives, 2012. CRC Press.
synarcual region
AD
Axial subdivision that includes a series of fused cervical vertebrae or vertebral elements. Based on Jeffrey C. Carrier. Biology of Sharks and Their Relatives, 2012. CRC Press.
tibial facet of astragalus
AD
Facet for the articulation of the tibia on the astragalus (talus).
trochanteric shelf
In Archosaurs was originally a possible insertion site for the m. iliofemoralis externus (Hutchinson 2001). In more derived dinosaurs this becomes a distinct process possibly providing the attachment surface for mm. iliotrochanteri in addition to m. iliofemoralis externus (Carrano and Hutchinson 2002)
AD
Anatomical projection on the anterolateral region of the proximal end of the femur.
true
true
tuber
AD
Eminence or swelling on anatomical surface.
crest
A ridge or similar projection rising above the surface of an anatomical structure.
AD
antimere
A part in the body of an organism that corresponds to an opposite symmetrical part.
AD
puboischiadic bar
A transverse flattened or cylindrical plate in the posterior body wall opposite the anterior ends of the pelvic fins, in front of the vent and at the posterior end of the body cavity, that supports a few anterior pelvic radials and a basal cartilage, the basipterygium. from Leonard J. V. Compagno. 2001. Sharks of the World: An Annotated and Illustrated Catalogue of Shark Species Known to Date. Volume 2.
AD
Potentially homologous to the pelvic girdle.
triphycercal tail
A caudal fin with three lobes.
AD
Found in coelacanths
palatoquadrate element
D. B.
Endochondral element that is part of the suspensorium sometimes ossifying distally as the quadrate bone and linking the basal section of the braincase to the lower jaw.
The palatoquadrate cartilage is the primary element of the suspensorium in larval amphibians and can ossify distally in some taxa, becoming the quadrate bone. In mammals the quadrate bone becomes the incus.
true
prepollical element
Is a endochondral element that is part of the mesopodial skeleton and is contained within the prepollex which in some taxa appears as a pre-axial digit-like projection anterior to the first digit of the hand.
true
prehallical element
DB
Is a endochondral element that is part of the mesopodial skeleton and is contained within the prehallux which in some taxa appears as a pre-axial digit-like projection anterior to the first digit of the foot.
true
obsolete maxillary saddle
A fossa that is a depression in the proximal end of the maxilla involved in articulation with the palatine. [Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.]
WD
true
palatine prong
A process on the palatine that projects outward and upward and articulates with a depression (maxillary saddle) in the proximal end of the maxilla. [Gosline WA et al, 1966; Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.]]
WD
true
true
true
urodermal bone
Paired, thin dermal bones at the rear of the caudal fin skeleton, derived from scales.
WD
http://www.briancoad.com/Dictionary/R-Z,%20Abbreviations,%20Symbols%20and%20References.htm
true
scale pocket
A continuous flap of skin with scales implanted in pockets or invaginations. [Baldwin, CC and Johnson GD. 1996. Interrelationships of Aulopiformes. Pages 355-404 in MLJ Stiassny, LR Parenti, and DG Johnson, (eds.), Interrelationships of fishes. Academic Press, San Diego, CA.]
WD
aphakic space
The space in the pupil, which is not occupied by the lens. A rostral aphakic space may enhance the forward binocular field of vision.
WD
http://www.briancoad.com/Dictionary/Introduction%20and%20A-F.htm
scale row
A series of scales in alignment with each other along some axis of the body. [PHENOSCAPE: bf].
WD
medial pelvic process
Process that is posteriorly oriented and medially located on the basipterygium. It is a paired projection. [PHENOSCAPE:bf]
WD
true
Process that is posteriorly oriented and medially located on the basipterygium. It is a paired projection. [PHENOSCAPE:bf]
http://hdl.handle.net/10088/11710
true
epipleural series
Anatomical cluster that consists of the epipleurals. [PHENOSCAPE:bf]
WD
metapterygium
Relevant to Elasmobranchii and Holocephali. It is usually the longest basal and is exceptionally long in males where it is distally modified into a clasper.
The posterior and innermost of the three principal basal cartilages in the fins of fishes.
Relevant to Elasmobranchii and Holocephali. It is usually the longest basal and is exceptionally long in males where it is distally modified into a clasper.
http://www.briancoad.com/dictionary/DicPics/metapterygium.htm
The posterior and innermost of the three principal basal cartilages in the fins of fishes.
http://www.thefreedictionary.com/Metapterygium
ceratotrichium
Elastoidin fin ray that is thickened, generally unbranched and found in the fins of Chondrichthyes.
http://purl.obolibrary.org/obo/uberon/tracker/129
PHENOSCAPE:pm
Elastoidin fin ray that is thickened, generally unbranched and found in the fins of Chondrichthyes.
fin ray
A rod-like entity that functions in support of fin folds and fins
http://purl.obolibrary.org/obo/uberon/tracker/129
PHENOSCAPE:pm
A rod-like entity that functions in support of fin folds and fins
elastoidin fin ray
Fin ray that is composed of elastoidin, unmineralized, and unsegmented.
http://purl.obolibrary.org/obo/uberon/tracker/129
Fin ray that is composed of elastoidin, unmineralized, and unsegmented.
PHENOSCAPE:pm
camptotrichium
Fin ray found in dipnoans that are composed of a superficial region of acellular fibrous bone, and a deep, mostly unmineralized, zone (Géraudie and Meunier 1982)
From Witten & Huysseune (2007): "Two zones have been recognized in these camptotrichia: a superficial region of acellular fibrous bone, and a deep, mostly unmineralized, zone (Géraudie and Meunier 1982)."
http://purl.obolibrary.org/obo/uberon/tracker/129
Fin ray found in dipnoans that are composed of a superficial region of acellular fibrous bone, and a deep, mostly unmineralized, zone (Géraudie and Meunier 1982)
PHENOSCAPE:pm
obsolete paired fin radial
true
Was already defined
UBERON:1500006