format-version: 1.2 ontology: uberon/subsets/appendicular-minimal [Term] id: BFO:0000001 name: entity property_value: BFO:0000179 "entity" xsd:string property_value: BFO:0000180 "Entity" xsd:string property_value: IAO:0000112 "Julius Caesar" xsd:string property_value: IAO:0000112 "the Second World War" xsd:string property_value: IAO:0000112 "Verdi’s Requiem" xsd:string property_value: IAO:0000112 "your body mass index" xsd:string property_value: IAO:0000116 "BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81" xsd:string property_value: IAO:0000116 "Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/0000004", comment="per discussion with Barry Smith", seeAlso="http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"} property_value: IAO:0000600 "An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/001-001"} property_value: isDefinedBy http://purl.obolibrary.org/obo/bfo.owl [Term] id: BFO:0000002 name: continuant def: "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts." [] is_a: BFO:0000001 ! entity relationship: part_of BFO:0000002 {all_only="true"} ! continuant property_value: BFO:0000179 "continuant" xsd:string property_value: BFO:0000180 "Continuant" xsd:string property_value: IAO:0000116 "BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240" xsd:string property_value: IAO:0000116 "Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/0000007"} property_value: IAO:0000600 "A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/008-002"} property_value: IAO:0000601 "if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/126-001"} property_value: IAO:0000601 "if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/009-002"} property_value: IAO:0000601 "if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/011-002"} property_value: IAO:0000602 "(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/009-002"} property_value: IAO:0000602 "(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/126-001"} property_value: IAO:0000602 "(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/008-002"} property_value: IAO:0000602 "(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/011-002"} property_value: isDefinedBy http://purl.obolibrary.org/obo/bfo.owl [Term] id: BFO:0000004 name: independent continuant def: "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])" [] {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/017-002"} comment: A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything. is_a: BFO:0000002 ! continuant relationship: part_of BFO:0000004 {all_only="true"} ! independent continuant property_value: BFO:0000179 "ic" xsd:string property_value: BFO:0000180 "IndependentContinuant" xsd:string property_value: IAO:0000112 "a chair" xsd:string property_value: IAO:0000112 "a heart" xsd:string property_value: IAO:0000112 "a leg" xsd:string property_value: IAO:0000112 "a molecule" xsd:string property_value: IAO:0000112 "a spatial region" xsd:string property_value: IAO:0000112 "an atom" xsd:string property_value: IAO:0000112 "an orchestra." xsd:string property_value: IAO:0000112 "an organism" xsd:string property_value: IAO:0000112 "the bottom right portion of a human torso" xsd:string property_value: IAO:0000112 "the interior of your mouth" xsd:string property_value: IAO:0000589 "anatomical entity (BFO)" xsd:string property_value: IAO:0000601 "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/134-001"} property_value: IAO:0000601 "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/018-002"} property_value: IAO:0000602 "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/018-002"} property_value: IAO:0000602 "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/134-001"} property_value: IAO:0000602 "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/017-002"} property_value: isDefinedBy http://purl.obolibrary.org/obo/bfo.owl [Term] id: BFO:0000040 name: material entity def: "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time." [] is_a: BFO:0000004 ! independent continuant property_value: BFO:0000179 "material" xsd:string property_value: BFO:0000180 "MaterialEntity" xsd:string property_value: IAO:0000112 "a flame" xsd:string property_value: IAO:0000112 "a forest fire" xsd:string property_value: IAO:0000112 "a human being" xsd:string property_value: IAO:0000112 "a hurricane" xsd:string property_value: IAO:0000112 "a photon" xsd:string property_value: IAO:0000112 "a puff of smoke" xsd:string property_value: IAO:0000112 "a sea wave" xsd:string property_value: IAO:0000112 "a tornado" xsd:string property_value: IAO:0000112 "an aggregate of human beings." xsd:string property_value: IAO:0000112 "an energy wave" xsd:string property_value: IAO:0000112 "an epidemic" xsd:string property_value: IAO:0000112 "the undetached arm of a human being" xsd:string property_value: IAO:0000116 "BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60" xsd:string property_value: IAO:0000116 "BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity." xsd:string property_value: IAO:0000116 "BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here." xsd:string property_value: IAO:0000600 "A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/019-002"} property_value: IAO:0000601 "every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/021-002"} property_value: IAO:0000601 "Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])" xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/020-002"} property_value: IAO:0000602 "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/021-002"} property_value: IAO:0000602 "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/020-002"} property_value: IAO:0000602 "(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] " xsd:string {IAO:0010000="http://purl.obolibrary.org/obo/bfo/axiom/019-002"} property_value: isDefinedBy http://purl.obolibrary.org/obo/bfo.owl [Term] id: CL:2000057 name: femural osteoblast def: "Any osteoblast that is part of a femur." [GOC:TermGenie] comment: http://www.sciencellonline.com/site/productInformation.php?keyword=4610 relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://www.wikidata.org/entity/Q35563349 creation_date: 2014-10-06T19:29:45Z [Term] id: CL:2000079 name: mesenchymal stem cell of femoral bone marrow def: "Any mesenchymal stem cell of the bone marrow that is part of a femur." [GOC:TermGenie] relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://www.wikidata.org/entity/Q35563349 creation_date: 2014-12-02T19:07:31Z [Term] id: UBERON:0000061 name: anatomical structure namespace: uberon def: "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome." [CARO:0000003] subset: common_anatomy subset: upper_level synonym: "biological structure" EXACT [] synonym: "connected biological structure" EXACT [CARO:0000003] xref: AAO:0010825 xref: AEO:0000003 xref: BILA:0000003 xref: CARO:0000003 xref: EHDAA2:0003003 xref: EMAPA:0 xref: FBbt:00007001 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} xref: FMA:305751 xref: FMA:67135 xref: GAID:781 xref: HAO:0000003 xref: http://dbpedia.org/ontology/AnatomicalStructure xref: MA:0003000 xref: MESH:D000825 xref: SCTID:362889002 xref: TAO:0000037 xref: TGMA:0001823 xref: VHOG:0001759 xref: XAO:0003000 xref: ZFA:0000037 is_a: UBERON:0000465 ! material anatomical entity property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:33208 property_value: RO:0002175 NCBITaxon:4751 [Term] id: UBERON:0000144 name: trochlea of humerus namespace: uberon def: "The medial portion of the articular surface of the humerus is named the trochlea, and presents a deep depression between two well-marked borders; it is convex from before backward, concave from side to side, and occupies the anterior, lower, and posterior parts of the extremity. It is directly inferior to the most prominent anterior humeral fossia, the Coronoid fossia. It articulates with the ulna." [Wikipedia:Trochlea_of_humerus] subset: human_reference_atlas synonym: "humeral trochlea" EXACT [FMA:23370] synonym: "trochlea humeri" EXACT [Wikipedia:Trochlea_of_humerus] xref: FMA:23370 xref: SCTID:282817004 xref: Wikipedia:Trochlea_of_humerus is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004404 ! distal epiphysis of humerus property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/4/4b/Trochleahumeri.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0000199 name: neck of radius namespace: uberon def: "The narrow part of the shaft of the radius just below the head." [http://www.medilexicon.com/medicaldictionary.php?t=58913] subset: pheno_slim synonym: "collum radii" EXACT [_rib] synonym: "radial neck" EXACT [FMA:23479] xref: FMA:23479 xref: galen:NeckOfRadius xref: SCTID:181942005 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001423 ! radius bone relationship: part_of UBERON:0004413 {source="FMA"} ! proximal epiphysis of radius [Term] id: UBERON:0000313 name: portion of cartilage tissue in tibia namespace: uberon def: "Cartilage pertaining to the tibia." [Dorlands_Medical_Dictionary:MerckSource] synonym: "cartilage of tibia" RELATED [FMA:33923] synonym: "tibial cartilage" EXACT [] xref: BTO:0000207 xref: FMA:33923 is_a: UBERON:0007391 ! pelvic appendage cartilage tissue relationship: part_of UBERON:0000979 ! tibia property_value: IAO:0000232 "This class represents a portion of cartilage tissue located in the tibia, *not* the cartilaginous condensation of an emrbyonic tibia" xsd:string [Term] id: UBERON:0000465 name: material anatomical entity namespace: uberon def: "Anatomical entity that has mass." [http://orcid.org/0000-0001-9114-8737] subset: common_anatomy subset: upper_level xref: AAO:0010264 xref: AEO:0000006 xref: BILA:0000006 xref: CARO:0000006 xref: EHDAA2:0003006 xref: FBbt:00007016 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} xref: FMA:67165 xref: HAO:0000006 xref: TAO:0001836 xref: TGMA:0001826 xref: VHOG:0001721 is_a: BFO:0000040 ! material entity is_a: UBERON:0001062 ! anatomical entity property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:33208 property_value: RO:0002175 NCBITaxon:4751 [Term] id: UBERON:0000976 name: humerus namespace: uberon def: "Paired endochondral long bone that extends between the pectoral girdle and the skeletal parts of the forelimb. [PHENOSCAPE:mah]." [AAO:0000679, https://github.com/obophenotype/uberon/issues/106, PHENOSCAPE:mah] subset: efo_slim subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "humeri" EXACT OMO:0003004 [PHENOSCAPE:ad] synonym: "humerus bone" EXACT [] synonym: "mesomere 1 of pectoral appendage" RELATED HOMOLOGY [ISBN:0226313409] synonym: "proximal metapterygial mesomere of pectoral appendage" RELATED HOMOLOGY [ISBN:0226313409] synonym: "proximal metapterygial mesomere of pectoral fin" RELATED HOMOLOGY [ISBN:0226313409] xref: AAO:0000679 xref: CALOHA:TS-2202 xref: EFO:0001398 xref: EMAPA:19106 xref: FMA:13303 xref: GAID:183 xref: galen:Humerus xref: MA:0001356 xref: MESH:D006811 xref: NCIT:C12731 xref: SCTID:181923006 xref: UMLS:C0020164 {source="ncithesaurus:Humerus"} xref: VHOG:0001158 xref: Wikipedia:Humerus xref: XAO:0003210 is_a: UBERON:0002495 {source="FMA"} ! long bone is_a: UBERON:0003461 ! shoulder bone is_a: UBERON:0003607 ! forelimb long bone is_a: UBERON:0004250 ! upper arm bone is_a: UBERON:0015053 ! humerus endochondral element relationship: part_of UBERON:0001440 {source="FMA"} ! forelimb skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Paired, elongate, cylindrical bones of endochondral origin that extend from the pectoral girdle to the elbows.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000679", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000003 "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001158", ontology="VHOG", source="ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "humeral" xsd:string [Term] id: UBERON:0000979 name: tibia namespace: uberon def: "The major preaxial endochondral bone in the posterior zeugopod[Phenoscape]." [PHENOSCAPE:mah] subset: efo_slim subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "shankbone" EXACT [Wikipedia:Tibia] synonym: "shinbone" EXACT [Wikipedia:Tibia] xref: AAO:0000890 xref: BTO:0001252 xref: CALOHA:TS-1048 xref: EFO:0003054 xref: EMAPA:19142 xref: FMA:24476 xref: GAID:204 xref: galen:Tibia xref: MA:0001361 xref: MESH:D013977 xref: NCIT:C12800 xref: SCTID:182061009 xref: UMLS:C0040184 {source="ncithesaurus:Tibia"} xref: Wikipedia:Tibia is_a: UBERON:0002495 {source="FMA"} ! long bone is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0004251 ! hindlimb zeugopod bone is_a: UBERON:0015004 ! tibia endochondral element relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray260.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "One of the two long bones of endochondral origin of the hind-epipodium; it is a straight, simple bone whose section is more or less rectangular at the ends and circular at its central portion.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000890", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0000980 name: trochanter namespace: uberon def: "A bony prominence near the extremity of the femur that normally serves as attachment points for hip and thigh muscles[MP,modified]." [MP:0004627] subset: pheno_slim subset: uberon_slim synonym: "femoral trochanter" EXACT [AAO:0000897] synonym: "trochanter of femur" EXACT [] xref: AAO:0000897 xref: FMA:82513 xref: MA:0002821 xref: NCIT:C33814 xref: SCTID:182047004 xref: UMLS:C0162370 {source="ncithesaurus:Trochanter"} xref: Wikipedia:Trochanter is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000981 {source="MA"} ! femur property_value: UBPROP:0000001 "Process on the ventral surface of the shaft of the femur.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000897", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "there are two in human (greater and lesser trochanters) and three in many other mammalian species (greater, lesser and third)" xsd:string {source="MP"} [Term] id: UBERON:0000981 name: femur namespace: uberon def: "Endochondral longbone connecting the pelvic girdle with posterior zeugopodium skeleton.[VSAO, modified]." [VSAO:0000186, Wikipedia:Femur] subset: efo_slim subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "femoral bone" RELATED [BTO:0001284] synonym: "mesomere 1 of pevlic appendage" RELATED HOMOLOGY [ISBN:0226313409] synonym: "os femorale" RELATED OMO:0003011 [BTO:0001284] synonym: "os femoris" RELATED OMO:0003011 [BTO:0001284] synonym: "os longissimum" RELATED OMO:0003011 [Wikipedia:Femur] synonym: "proximal metapterygial mesomere of pelvic appendage" RELATED HOMOLOGY [ISBN:0226313409] synonym: "proximal metapterygial mesomere of pelvic fin" RELATED HOMOLOGY [ISBN:0226313409] synonym: "thigh bone" EXACT [] xref: AAO:0000887 xref: AAO:0000889 xref: BTO:0001284 xref: CALOHA:TS-0322 xref: EFO:0001396 xref: EMAPA:19143 xref: FMA:9611 xref: GAID:199 xref: galen:Femur xref: MA:0001359 xref: MESH:D005269 xref: NCIT:C12717 xref: SCTID:182046008 xref: UMLS:C0015811 {source="ncithesaurus:Femur"} xref: VHOG:0001159 xref: VSAO:0000186 xref: Wikipedia:Femur xref: XAO:0003214 is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0003826 ! upper leg bone is_a: UBERON:0015052 ! femur endochondral element relationship: part_of UBERON:0001441 {source="FMA"} ! hindlimb skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/7/73/Gray252.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Endochondral longbone connecting the pelvic girdle with posterior zeugopodium.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000186", ontology="VSAO", source="VSAO:NI"} property_value: UBPROP:0000001 "Paired, elongate, cylindrical bones of endochondral origin that form the thighs, extending from the pelvic girdles to the knees.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000889", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000003 "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001159", ontology="VHOG", source="ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "femoral" xsd:string [Term] id: UBERON:0001010 name: diaphysis of ulna namespace: uberon def: "The body of the ulna at its upper part is prismatic in form, and curved so as to be convex behind and lateralward; its central part is straight; its lower part is rounded, smooth, and bent a little lateralward. It tapers gradually from above downward, and has three borders and three surfaces." [Wikipedia:Body_of_ulna] synonym: "body of ulna" EXACT [FMA:33760] synonym: "corpus ulnae" EXACT [FMA:33760] synonym: "shaft of ulna" EXACT [FMA:33760] synonym: "shaft of ulna" RELATED [Wikipedia:Body_of_ulna] synonym: "supinator crest" RELATED [Wikipedia:Body_of_ulna] synonym: "ulnar diaphysis" EXACT [FMA:33760] xref: FMA:33760 xref: NCIT:C120676 xref: SCTID:302520004 xref: Wikipedia:Body_of_ulna is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:0001012 name: head of radius namespace: uberon def: "The head of the radius has a cylindrical form, and on its upper surface is a shallow cup or fovea for articulation with the capitulum (or capitellum) of the humerus. The circumference of the head is smooth; it is broad medially where it articulates with the radial notch of the ulna, narrow in the rest of its extent, which is embraced by the annular ligament. The deepest point in the fovea is not axi-symmetric with the long axis of the radius, creating a cam effect during pronation and supination[WP]." [Wikipedia:Head_of_radius] subset: pheno_slim synonym: "caput radii" RELATED OMO:0003011 [Wikipedia:Head_of_radius] synonym: "radial head" EXACT [FMA:33773] xref: FMA:33773 xref: galen:HeadOfRadius xref: SCTID:181941003 xref: Wikipedia:Head_of_radius is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004413 {source="FMA"} ! proximal epiphysis of radius property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/4/47/Gray214.png" xsd:anyURI [Term] id: UBERON:0001028 name: diaphysis of radius namespace: uberon def: "A diaphysis that is part of a radius bone[Automatically generated definition]." [OBOL:automatic, Wikipedia:Body_of_radius] subset: pheno_slim synonym: "body of radius" EXACT [FMA:33782] synonym: "corpus radii" EXACT [FMA:33782] synonym: "radial diaphysis" EXACT [FMA:33782] synonym: "radial shaft" RELATED [Wikipedia:Body_of_radius] synonym: "shaft of radius" EXACT [FMA:33782] synonym: "shaft of radius" RELATED [Wikipedia:Body_of_radius] xref: FMA:33782 xref: NCIT:C120674 xref: SCTID:302518002 xref: Wikipedia:Body_of_radius is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0001423 ! radius bone property_value: UBPROP:0000001 "The body of the radius (or shaft of radius) is prismoid in form, narrower above than below, and slightly curved, so as to be convex lateralward. It presents three borders and three surfaces[Wikipedia:Body_of_radius]." xsd:string {source="Wikipedia:Body_of_radius"} [Term] id: UBERON:0001062 name: anatomical entity namespace: uberon def: "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species." [FMA:62955, http://orcid.org/0000-0001-9114-8737] subset: common_anatomy subset: upper_level xref: AAO:0010841 xref: AEO:0000000 xref: BFO:0000004 xref: BILA:0000000 xref: BIRNLEX:6 xref: CARO:0000000 xref: EHDAA2:0002229 xref: FBbt:10000000 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} xref: FMA:62955 xref: HAO:0000000 xref: MA:0000001 xref: NCIT:C12219 xref: TAO:0100000 xref: TGMA:0001822 xref: UMLS:C1515976 {source="ncithesaurus:Anatomic_Structure_System_or_Substance"} xref: WBbt:0000100 xref: XAO:0000000 xref: ZFA:0100000 is_a: BFO:0000004 ! independent continuant property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:33208 property_value: RO:0002175 NCBITaxon:4751 [Term] id: UBERON:0001105 name: clavicle bone namespace: uberon def: "A paired dermal or endochondral bone that is part of the pectoral girdle. The clavicle may be in contact with the interclavicle or coracoid and forms an attachment site for pectoral musculature. [PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/103, PHENOSCAPE:ad] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "clavicle" EXACT [VSAO:0005031] synonym: "clavicula" EXACT [VSAO:0005031] synonym: "collar bone" EXACT [] synonym: "collarbone" EXACT [] xref: AAO:0000761 xref: EMAPA:18721 xref: FMA:13321 xref: GAID:182 xref: galen:Clavicle xref: MA:0001329 xref: MESH:D002968 xref: MFMO:0000047 xref: NCIT:C12695 xref: SCTID:181910004 xref: UMLS:C0008913 {source="ncithesaurus:Clavicle"} xref: VHOG:0000849 xref: VSAO:0005031 xref: Wikipedia:Clavicle is_a: UBERON:0002495 {source="FMA"} ! long bone is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 {source="FMA", source="VSAO"} ! pectoral girdle skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Slender, paired bones of intramembranous origin that invest the anterior margins of the procoracoids.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000761", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: part_of zonal element (AAO:0000936)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000761", ontology="AAO"} property_value: UBPROP:0000003 "In early tetrapods, the connecting skull bone, the posttemporal, and adjoining shoulder bones, supracleithrum and postcleithrum (=anocleithrum), are absent, leaving a dermal shoulder girdle composed of the remaining ventral elements: the paired cleithrum and clavicle, and an unpaired midventral interclavicle that joins both halves of the girdle across the midline. (...) Several dermal elements of the shoulder persist in early synapsids. The clavicle and interclavicle are present in therapsids and monotremes, but in marsupials and placentals, the interclavicle is absent, the clavicle often is reduced in size, and the scapula becomes the predominant shoulder element.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000849", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.330-333 and Figure 9.18", source="http://bgee.unil.ch/"} property_value: UBPROP:0000007 "clavicular" xsd:string property_value: UBPROP:0000008 "The clavicle first appears as part of the skeleton in primitive bony fish, where it is associated with the pectoral fin; they also have a bone called the cleithrum. In such fish, the paired clavicles run behind and below the gills on each side, and are joined by a solid symphysis on the fish's underside. They are, however, absent in cartilagenous fish and in the vast majority of living bony fish, including all of the teleosts[ISBN 0-03-910284-X]." xsd:string property_value: UBPROP:0000011 "In most birds and mammals the clavicles are the only dermal elements in the trunk, and is the only membrane bone associated with the pectoral girdle in these taxa. However, there can be secondary cartilage, or subsequent endochondral ossification, or fusion with endochondral elements. In rodents, the lateral ends of the clavicle are endochondral but the main portion is dermal." xsd:string {source="ISBN:978-0-12-319060-4"} property_value: UBPROP:0000012 "FMA and MA differ in whether they consider this part of the shoulder" xsd:string {external_ontology="FMA"} [Term] id: UBERON:0001269 name: acetabular part of hip bone namespace: uberon def: "The acetabulum is a concave surface of the pelvis. The head of the femur meets with the pelvis at the acetabulum, forming the hip joint. There are three bones of the os coxae (hip bone) that come together to form the acetabulum. Contributing a little more than two-fifths of the structure is the ischium, which provides lower and side boundaries to the acetabulum. The ilium forms the upper boundary, providing a little less than two-fifths of the structure of the acetabulum. The rest is formed by the pubis, near the midline. It is bounded by a prominent uneven rim, which is thick and strong above, and serves for the attachment of the acetabular labrum, which reduces its opening, and deepens the surface for formation of the hip joint. At the lower part of the acetabulum is the acetabular notch, which is continuous with a circular depression, the acetabular fossa, at the bottom of the cavity of the acetabulum. The rest of the acetabulum is formed by a curved, crescent-moon shaped surface, the lunate surface, where the joint is made with the head of the femur. Its counterpart in the pectoral girdle is the glenoid fossa.[WP,unvetted]." [Wikipedia:Acetabulum] subset: pheno_slim subset: uberon_slim synonym: "acetabular region" EXACT [VHOG:0000974] synonym: "acetabulum" EXACT [MA:0001335] xref: AAO:0000770 xref: EHDAA:10661 xref: EMAPA:18346 xref: FMA:16579 xref: GAID:206 xref: MA:0001335 xref: MESH:D000077 xref: NCIT:C32042 xref: RETIRED_EHDAA2:0001427 xref: SCTID:182027007 xref: UMLS:C0000962 {source="ncithesaurus:Acetabulum"} xref: VHOG:0000974 xref: Wikipedia:Acetabulum relationship: part_of UBERON:0001273 {source="Phenoscape"} ! ilium property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg" xsd:anyURI property_value: UBPROP:0000001 "Cavity for the articulation of the proximal bone of the hind limb.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000770", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000003 "During the transformation from the osteolepiform fins to tetrapod limbs, the appendages and girdles underwent a number of radical changes. The pelvic girdle became a weight-bearing structure by evolution of an ischium, a full mesio-ventral contact between the two sides of the girdle, an ilium, and a contact between the vertebral column and the girdle through a sacral rib. Fore- and hindlimbs shifted laterally by reorientation of the glenoid and the acetabulum.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000974", ontology="VHOG", source="DOI:10.1038/nature04119 Boisvert CA, The pelvic fin and girdle of Panderichthys and the origin of tetrapod locomotion. Nature (2005)", source="http://bgee.unil.ch/"} property_value: UBPROP:0000008 "In reptiles and in birds, the acetabula are deep sockets." xsd:string {source="WP"} property_value: UBPROP:0000012 "whilst WP defines this as a surface, MA treats it as a bone. There are other FMA classes that may be better suited to representing the surface." xsd:string {external_ontology="MA"} [Term] id: UBERON:0001272 name: innominate bone namespace: uberon def: "A fused bone consisting of the ilium, ischium and pubis. Together with the sacrum and coccyx, it comprises the pelvis. [WP,modified]." [https://github.com/obophenotype/uberon/issues/290, https://orcid.org/0000-0002-6601-2165, Wikipedia:Hip_bone] subset: human_reference_atlas subset: uberon_slim synonym: "basipterygium" RELATED [] synonym: "bone of pelvic girdle" BROAD [FMA:16585] synonym: "coxal bone" EXACT [FMA:16585] synonym: "hip bone" EXACT [FMA:16585] synonym: "innominate" BROAD [] synonym: "innominate bone" EXACT [FMA:16585] synonym: "os coxa" EXACT OMO:0003011 [] synonym: "os coxae" EXACT OMO:0003011 [FMA:16585, FMA:TA] synonym: "os innominatum" RELATED OMO:0003011 [Wikipedia:Hip_bone] synonym: "pelvic bone" EXACT [FMA:16585] xref: FMA:16585 xref: GAID:205 xref: SCTID:361776002 xref: Wikipedia:Hip_bone is_a: UBERON:0007830 ! pelvic girdle bone/zone relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png" xsd:anyURI property_value: IAO:0000116 "currently this class is restricted to exclude the teleost bone as the definition mentions ilium, ischium and pubis. In future we may add a grouping class for girdle bones that supports the appendage" xsd:string property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "The hip/pelvic bone/basipterygium first appears in fishes, where it consists of a simple, usually triangular bone, to which the pelvic fin articulates. The hip bones on each side usually connect with each other at the forward end, and are even solidly fused in lungfishes and sharks, but they never attach to the vertebral column" xsd:string {source="WP"} property_value: UBPROP:0000012 "in FMA this is a paired structure. NCITA has 'pelvic bone' but this is the *superclass* of ilium/ischium/pubis. The MA class 'pelvis bone' is actually a superclass of 'pelvic girdle bone' and caudal/sacral vertebra." xsd:string {external_ontology="FMA"} [Term] id: UBERON:0001273 name: ilium namespace: uberon def: "Paired endochondral bone that is the dorsal-most of the pelvic bones, offering attachment areas for gluteal muscles on its main surface [PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/105, https://github.com/obophenotype/uberon/issues/60, PHENOSCAPE:ad] subset: efo_slim subset: pheno_slim subset: uberon_slim synonym: "iliac bone" EXACT [EMAPA:18726] synonym: "ilium bone" EXACT [] synonym: "illium" RELATED [] synonym: "os iliacum" EXACT [] synonym: "os ilii" EXACT [] synonym: "os ilium" EXACT OMO:0003011 [FMA:16589, FMA:TA] xref: AAO:0000772 xref: CALOHA:TS-2200 xref: EFO:0003049 xref: EMAPA:18726 xref: FMA:16589 xref: GAID:207 xref: galen:Ilium xref: MA:0001336 xref: MESH:D007085 xref: NCIT:C32765 xref: SCTID:182029005 xref: UMLS:C0020889 {source="ncithesaurus:Ilium"} xref: Wikipedia:Ilium_(bone) is_a: UBERON:0007830 ! pelvic girdle bone/zone is_a: UBERON:0015054 ! iliac endochondral element relationship: part_of UBERON:0001272 {source="FMA"} ! innominate bone relationship: part_of UBERON:0007832 {source="VSAO"} ! pelvic girdle skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb" xsd:anyURI property_value: http://xmlns.com/foaf/0.1/depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb" xsd:anyURI property_value: RO:0002161 NCBITaxon:32443 {source="Wikipedia"} property_value: RO:0002174 NCBITaxon:8570 {source="Wikipedia"} property_value: UBPROP:0000001 "Paired, rodlike endochondral bones that constitute the anterior pelvic girdle.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000772", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000007 "iliac" xsd:string property_value: UBPROP:0000008 "All reptiles have an ilium except snakes, although some snake species have a tiny bone which is considered to be an ilium" xsd:string {source="WP"} property_value: UBPROP:0000012 "this is_a hip bone in MA." xsd:string {external_ontology="MA"} [Term] id: UBERON:0001274 name: ischium namespace: uberon def: "Endochondral bone that is paired, forming the posterior part of the pelvis, articulating with the pubis and ilium." [VSAO:0005006, VSAO:NI, Wikipedia:Ischium] subset: pheno_slim subset: uberon_slim synonym: "ischial bone" EXACT [EMAPA:18727] synonym: "ischium bone" EXACT [] synonym: "os ischii" RELATED OMO:0003011 [AAO:0000860, Wikipedia:Ischium] xref: AAO:0000860 xref: EMAPA:18727 xref: FMA:16592 xref: GAID:208 xref: galen:Ischium xref: MA:0001337 xref: MESH:D007512 xref: NCIT:C32884 xref: SCTID:182025004 xref: UMLS:C0022122 {source="ncithesaurus:Ischium"} xref: VSAO:0005006 xref: Wikipedia:Ischium is_a: UBERON:0007830 {source="MA"} ! pelvic girdle bone/zone is_a: UBERON:0015056 ! ischial endochondral element relationship: part_of UBERON:0001272 ! innominate bone relationship: part_of UBERON:0007832 {source="VSAO"} ! pelvic girdle skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg" xsd:anyURI property_value: http://xmlns.com/foaf/0.1/depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb" xsd:anyURI property_value: http://xmlns.com/foaf/0.1/depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb" xsd:anyURI property_value: UBPROP:0000001 "Paired bones of endochondral origin that constitute the posterior elements of the pelvic girdle. They are synostotically fused to each other and form the posterior part of the acetabulum.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000860", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000007 "ischial" xsd:string property_value: UBPROP:0000012 "this is_a hip bone in MA; in FMA it is a zone of bone organ." xsd:string {external_ontology="MA"} [Term] id: UBERON:0001275 name: pubis namespace: uberon def: "A paired endochondral bone making up the anteroventral region of the tripartite pelvic girdle forming part of the ventral edge of the acetabulum. The origin site of many proximal hindlimb muscles. [PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/68, PHENOSCAPE:ad] subset: pheno_slim subset: uberon_slim synonym: "os pubis" RELATED [Wikipedia:Pubis_(bone)] synonym: "pubic bone" RELATED [Wikipedia:Pubis_(bone)] synonym: "pubis bone" RELATED [Wikipedia:Pubis_(bone)] xref: AAO:0000861 xref: EMAPA:18728 xref: FMA:16595 xref: galen:Pubis xref: MA:0001338 xref: MESH:D011630 xref: NCIT:C33423 xref: SCTID:182035005 xref: UMLS:C0034014 {source="ncithesaurus:Pubic_Bone"} xref: Wikipedia:Pubis_(bone) is_a: UBERON:0007830 {source="MA"} ! pelvic girdle bone/zone is_a: UBERON:0015055 ! pubic endochondral element relationship: part_of UBERON:0001272 {source="FMA"} ! innominate bone relationship: part_of UBERON:0007832 {source="VSAO"} ! pelvic girdle skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://xmlns.com/foaf/0.1/depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pelvis.glb" xsd:anyURI property_value: http://xmlns.com/foaf/0.1/depiction "https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pelvis.glb" xsd:anyURI property_value: UBPROP:0000001 "Paired, cartilaginous (ocassionally calcified) elements that form the ventral portion of the pelvic girdle. Each is located ventral to the acetabulum between the anteroventral margin of the ischium and the posteroventral margin of the illium. When the element calcifies or ossifies, its articulation with adjacent elements is difficult to distinguish. Both pubes are synchondrotically fused to one another.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000861", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000012 "isa bone zone in FMA" xsd:string {external_ontology="FMA"} [Term] id: UBERON:0001423 name: radius bone namespace: uberon def: "The major preaxial endochondral bone in the anterior zeugopod[Phenoscape]." [PHENOSCAPE:mah] comment: Due to the presence of the radius in Tetrpodomorph fish this element is not inherently linked to the presence of digits or flexor musculature. The corresponding bone in the posterior fin/limb is the tibia.[Phenoscape]. In four-legged animals, the radius is the main load-bearing bone of the lower forelimb. Its structure is similar in most terrestrial tetrapods, but it may be fused with the ulna in some mammals (such as horses) and reduced or modified in animals with flippers or vestigial forelimbs [ISBN:0-03-910284-X] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "radius" EXACT [MA:0001357] xref: AAO:0000788 xref: CALOHA:TS-2199 xref: EMAPA:19103 xref: FMA:23463 xref: GAID:185 xref: galen:Radius xref: MA:0001357 xref: MESH:D011884 xref: NCIT:C12777 xref: SCTID:181940002 xref: UMLS:C0034627 {source="ncithesaurus:Radius_Bone"} xref: VSAO:0005012 xref: Wikipedia:Radius_(bone) is_a: UBERON:0003466 ! forelimb zeugopod bone is_a: UBERON:0003607 ! forelimb long bone is_a: UBERON:0015001 ! radius endochondral element relationship: part_of UBERON:0010703 {source="VSAO"} ! forelimb zeugopod skeleton property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "One of the two long bones of endochondral origin of the fore-epipodium; it is located on the lateral side of the ulna. Its upper end articulates with both the humerus and the ulna, whereas the lower articulates with the carpals.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000788", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0001424 name: ulna namespace: uberon def: "The major postaxial endochondral bone in the anterior zeugopod[Phenoscape]." [PHENOSCAPE:mah] comment: The corresponding bone in the posterior fin/limb is the fibula. subset: human_reference_atlas subset: pheno_slim subset: uberon_slim xref: AAO:0000789 xref: EMAPA:19104 xref: FMA:23466 xref: GAID:188 xref: galen:Ulna xref: MA:0001358 xref: MESH:D014457 xref: NCIT:C12809 xref: SCTID:181948009 xref: UMLS:C0041600 {source="ncithesaurus:Ulna"} xref: VSAO:0005013 xref: Wikipedia:Ulna is_a: UBERON:0003466 ! forelimb zeugopod bone is_a: UBERON:0003607 ! forelimb long bone is_a: UBERON:0015003 ! ulna endochondral element relationship: part_of UBERON:0010703 {source="VSAO"} ! forelimb zeugopod skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "One of the two long bones of endochondral origin of the fore-epipodium; it is located on the medial (inner) side of the radius. The upper end of the ulna articulates with the lower end of the humerus forming a strong hinge joint with the carpals, whereas the lower articulates with the carpals.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000789", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000007 "ulnar" xsd:string [Term] id: UBERON:0001427 name: radiale namespace: uberon def: "Endochondral proximal carpal bone articulating with the radius." [https://github.com/obophenotype/uberon/issues/112, UBERON:mah] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "navicular bone of hand" EXACT [] synonym: "navicular bone of manus" EXACT [] synonym: "navicular of hand" RELATED [] synonym: "navicular of manus" EXACT [] synonym: "os carpi radiale" EXACT [] synonym: "os naviculare manus" EXACT [Wikipedia:Scaphoid_bone] synonym: "os scaphoideum" EXACT [Wikipedia:Scaphoid_bone] synonym: "radial carpal bone" EXACT [] synonym: "scaphoid" EXACT [MA:0002555, NCBITaxon:40674, Wikipedia:Scaphoid] synonym: "scaphoid bone" EXACT [] synonym: "scaphoideum" EXACT [Wikipedia:Scaphoid_bone] xref: AAO:0000790 xref: EMAPA:37660 {source="MA:th"} xref: FMA:23709 xref: GAID:180 xref: galen:Scaphoid xref: MA:0002555 xref: MESH:D021361 xref: NCIT:C12854 xref: SCTID:181958008 xref: UMLS:C0223724 {source="ncithesaurus:Scaphoid_Bone"} xref: Wikipedia:Scaphoid is_a: UBERON:0001480 ! proximal carpal bone property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png" xsd:anyURI property_value: IAO:0000116 "TODO - check AAO placement; in rodents this is fused with the lunate to make the scapholunate" xsd:string property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "One of two element that constitute the basal row of carpals. It articulates proximally with the radius, mesially with the ulnare (or pars intermedia of the ulnare when the ulnare is fused to the intermedium) and distally with the centrale (also recognized by some authors as element Y). This element originates from one or two condensation centers. Occasionally it may fuse to carpal 5(4), the ulnare, or other elements.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000790", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "the bone of the hand located at the radial side of the carpus and which articulates with the radius, trapezium, trapezoideum, capitate, and lunate bones" xsd:string {source="MP:0010775,MGI:llw2"} property_value: UBPROP:0000013 "In reptiles, birds, and amphibians, this bone is instead commonly referred to as the radiale, because of its articulation with the radius[WP]" xsd:string [Term] id: UBERON:0001428 name: intermedium namespace: uberon def: "Endochondral carpal bone articulating with the ulnare and the radiale." [https://github.com/obophenotype/uberon/issues/113, UBERON:mah] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "intermediate carpal bone" RELATED [] synonym: "intermedium" BROAD [http://orcid.org/0000-0002-6601-2165] synonym: "lunar" EXACT [VSAO:0005040] synonym: "lunate" EXACT SENSU [MA:0002556, NCBITaxon:40674] synonym: "lunate bone" EXACT [] synonym: "os carpi intermedium" EXACT [] synonym: "os lunatum" EXACT OMO:0003011 [VSAO:0005040] synonym: "os lunatum" RELATED OMO:0003011 [Wikipedia:Lunate_bone] synonym: "semilunar" RELATED [] synonym: "semilunar bone" EXACT [] synonym: "semilunate" RELATED [] xref: EMAPA:37659 {source="MA:th"} xref: FMA:23712 xref: GAID:181 xref: galen:Lunate xref: MA:0002556 xref: MESH:D012667 xref: NCIT:C12786 xref: SCTID:181959000 xref: UMLS:C0036624 {source="ncithesaurus:Lunate_Bone"} xref: VSAO:0005040 xref: Wikipedia:Lunate_bone is_a: UBERON:0001480 {source="FMA"} ! proximal carpal bone property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "articulating with the ulnare and the radiale[VSAO]. human articulations: radius proximally capitate and hamate distally scaphoid laterally triangular medially" xsd:string [Term] id: UBERON:0001429 name: pisiform namespace: uberon def: "A laterally positioned sesamoid bone found in close proximity with and occasionally fused to the ulnare." [https://github.com/obophenotype/uberon/issues/116, PHENOSCAPE:ad] subset: human_reference_atlas subset: uberon_slim synonym: "accessory carpal bone" RELATED [MA:0001339] synonym: "os pisiforme" RELATED OMO:0003011 [Wikipedia:Pisiform_bone] synonym: "pisiform bone" EXACT [FMA:23718] xref: EMAPA:36165 xref: FMA:23718 xref: galen:Pisiform xref: MA:0001339 xref: NCIT:C12855 xref: SCTID:181966004 xref: SCTID:9181003 xref: UMLS:C0223729 {source="ncithesaurus:Pisiform_Bone"} xref: Wikipedia:Pisiform_bone is_a: UBERON:0001480 {source="FMA", source="MA"} ! proximal carpal bone is_a: UBERON:0007997 ! sesamoid bone of manus property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png" xsd:anyURI property_value: IAO:0000116 "check: accessory carpal" xsd:string property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0001430 name: distal carpal bone 1 namespace: uberon subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "carpal 1" RELATED [AAO:0010634] synonym: "distal carpal 1" EXACT [VSAO:0005043] synonym: "greater multangular" RELATED [] synonym: "greater multangular bone" EXACT [] synonym: "greater multiangular" RELATED [MA:0001340] synonym: "hand distal carpal bone 1" RELATED [MA:0001340] synonym: "manus distal carpal bone 1" RELATED [] synonym: "os trapezium" EXACT [VSAO:0005043] synonym: "trapezial bone" EXACT [FMA:23721] synonym: "trapezium" EXACT [VSAO:0005043] synonym: "trapezium bone" EXACT [FMA:23721] xref: AAO:0010634 xref: EMAPA:36173 xref: FMA:23721 xref: galen:Trapezium xref: MA:0001340 xref: NCIT:C12857 xref: SCTID:361780007 xref: UMLS:C0223736 {source="ncithesaurus:Trapezial_Bone"} xref: VSAO:0005043 xref: Wikipedia:Trapezium_(bone) is_a: UBERON:0001481 {source="FMA"} ! distal carpal bone is_a: UBERON:0015084 ! distal carpal bone 1 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "located between radiale and first metacarpal[VSAO]. in humans - The capitate articulates with 1st metacarpal distally, scaphoid proximally, trapezoid medially, 2nd metacarpal medially" xsd:string {source="WP"} [Term] id: UBERON:0001431 name: distal carpal bone 2 namespace: uberon subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "carpal 2" RELATED [AAO:0000848] synonym: "distal carpal 2" EXACT [VSAO:0005044] synonym: "hand distal carpal bone 2" RELATED [MA:0001341] synonym: "lesser multangular" RELATED [] synonym: "lesser multangular bone" EXACT [FMA:23724] synonym: "lesser multiangular" RELATED [MA:0001341] synonym: "manus distal carpal bone 2" RELATED [] synonym: "os trapezoideum" EXACT [VSAO:0005044] synonym: "trapezoid" EXACT [VSAO:0005044] synonym: "trapezoid bone" EXACT [FMA:23724] xref: AAO:0000848 xref: EMAPA:36174 xref: FMA:23724 xref: galen:Trapezoid xref: MA:0001341 xref: NCIT:C12859 xref: SCTID:361781006 xref: UMLS:C0223741 {source="ncithesaurus:Trapezoid_Bone"} xref: VSAO:0005044 xref: Wikipedia:Trapezoid_bone is_a: UBERON:0001481 ! distal carpal bone is_a: UBERON:0015087 ! distal carpal bone 2 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Small element that articulates with the prepollex, metacarpal II(I) and metacarpal III(II). It may be fused to element Y or carpal 3(2).[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000848", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The trapezoid bone (lesser multangular bone) is a carpal bone in tetrapods, including humans. It is the smallest bone in the distal row. It may be known by its wedge-shaped form, the broad end of the wedge constituting the dorsal, the narrow end the palmar surface; and by its having four articular facets touching each other, and separated by sharp edges. It is homologous with the 'second distal carpal' of reptiles and amphibians. The etymology derives from the Greek trapezion which means 'irregular quadrilateral,' from tra- 'four' and peza 'foot' or 'edge. ' Literally, 'a little table' from trapeza meaning 'table' and -oeides 'shaped.[Wikipedia:Trapezoid_bone]" xsd:string {source="Wikipedia:Trapezoid_bone"} property_value: UBPROP:0000008 "located in the distal part of the carpus and articulating with the second metacarpal, the distal carpals 1 and 2 and the radiale.[VSAO] in humans - The capitate articulates with 2nd metacarpal distally, scaphoid proximally, trapezium medially, capitate medially[WP] Amphibians: Small element that articulates with the prepollex, metacarpal II(I) and metacarpal III(II). It may be fused to element Y or carpal 3(2)" xsd:string {source="AAO"} [Term] id: UBERON:0001432 name: distal carpal bone 3 namespace: uberon subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "capitate" EXACT [MA:0001342] synonym: "capitate bone" EXACT [FMA:23727] synonym: "carpal 3" RELATED [AAO:0000849] synonym: "distal carpal 3" EXACT [VSAO:0005045] synonym: "hand distal carpal bone 3" RELATED [MA:0001342] synonym: "magnum" RELATED [VSAO:0005045] synonym: "os capitatum" RELATED [Wikipedia:Capitate_bone] synonym: "os magnum" RELATED [] synonym: "os magnum (carpus)" EXACT [FMA:23727] xref: AAO:0000849 xref: EMAPA:36169 xref: FMA:23727 xref: galen:Capitate xref: MA:0001342 xref: NCIT:C12856 xref: SCTID:181964001 xref: UMLS:C0223733 {source="ncithesaurus:Capitate_Bone"} xref: VSAO:0005045 xref: Wikipedia:Capitate_bone is_a: UBERON:0001481 {source="FMA", source="palaeos"} ! distal carpal bone is_a: UBERON:0015090 ! distal carpal bone 3 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Small element that articulates anteriorly with metacarpal III(II). It may be fused to carpals 2(1), 4(3), 5(4), or other elements.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000849", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "medially located and articulates with metacarpals 2-4, distal carpal 5 and the intermedium[VSAO] In the human hand, the capitate bone is the largest of the carpal bones, and occupies the center of the wrist - The capitate articulates with seven bones: the scaphoid and lunate proximally, the second metacarpal, third metacarpal, and fourth metacarpal distally, the lesser multangular on the radial side, and the hamate on the ulnar side" xsd:string {source="WP"} [Term] id: UBERON:0001433 name: distal carpal bone 4 namespace: uberon subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "carpal 4" RELATED [AAO:0000850] synonym: "distal carpal 4" EXACT [VSAO:0005046] synonym: "hamate" EXACT [MA:0001343] synonym: "hamate bone" EXACT [FMA:23730] synonym: "hand distal carpal bone 4" RELATED [MA:0001343] synonym: "os hamatum" RELATED OMO:0003011 [VSAO:0005046, Wikipedia:Hamate_bone] synonym: "unciform" RELATED [MA:0001343] synonym: "unciform bone" EXACT [FMA:23730] synonym: "uncinate" RELATED [MA:0001343] xref: AAO:0000850 xref: EMAPA:36172 xref: FMA:23730 xref: galen:Hamate xref: MA:0001343 xref: NCIT:C12860 xref: SCTID:181967008 xref: UMLS:C0560737 {source="ncithesaurus:Hamate_Bone"} xref: VSAO:0005046 xref: Wikipedia:Hamate_bone is_a: UBERON:0001481 {source="FMA"} ! distal carpal bone is_a: UBERON:0015093 ! distal carpal bone 4 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Small element that articulates anteriorly with metacarpal IV(III). It may be fused to carpal 3(2), 5(4), or other elements.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000850", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "articulates with the lunar, distal carpal 3, the ulnare as well as metacarpals 4 and 5.[VSAO]. In the human hand the lunate proximally the fourth and fifth metacarpals distally the triangular medially the capitate laterally[WP] Amphibians: Small element that articulates anteriorly with metacarpal IV(III). It may be fused to carpal 3(2), 5(4), or other elements" xsd:string {source="AAO"} [Term] id: UBERON:0001435 name: carpal bone namespace: uberon def: "A bone that is part of the carpal skeleton. Examples: scaphoid, lunate, capitate[cjm]." [https://orcid.org/0000-0002-6601-2165] subset: pheno_slim subset: uberon_slim synonym: "bone of carpus" EXACT [] synonym: "carpal" EXACT [PHENOSCAPE:ad] synonym: "carpal skeleton bone" EXACT [] synonym: "carpus bone" RELATED [EMAPA:25056] xref: EMAPA:25056 xref: FMA:23889 xref: GAID:179 xref: galen:CarpalBone xref: MA:0000296 xref: MESH:D002348 xref: NCIT:C12688 xref: SCTID:83936004 xref: UMLS:C0007285 {source="ncithesaurus:Carpal_Bone"} xref: Wikipedia:Carpus is_a: UBERON:0003656 ! mesopodium bone is_a: UBERON:0005897 ! manus bone is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg" xsd:anyURI property_value: UBPROP:0000008 "In tetrapods, the carpals is the sole cluster of the bones in the wrist between the radius and ulna and the metacarpus. The bones of the carpus do not belong to individual fingers (or toes in quadrupeds), whereas those of the metacarpus do. The corresponding part of the foot is the tarsus. The carpal bones allow the wrist to move and rotate vertically, horizontally and laterally. In human anatomy, the main role of the carpus is to facilitate effective positioning of the hand and powerful use of the extensors and flexors of the forearm, but the mobility of individual carpal bones increase the freedom of movements at the wrist." xsd:string {source="Wikipedia:Carpus"} [Term] id: UBERON:0001436 name: phalanx of manus namespace: uberon def: "A phalanx that is part of a forelimb autopod[Automatically generated definition]." [https://orcid.org/0000-0002-6601-2165, Wikipedia:Phalanges_of_the_hand] subset: pheno_slim synonym: "bone of finger" RELATED [FMA:23914] synonym: "digital bone of manus" NARROW [OBOL:automatic] synonym: "digitus manus phalanx" EXACT [OBOL:automatic] synonym: "finger phalanx" EXACT [OBOL:automatic] synonym: "hand digit phalanx" EXACT [OBOL:automatic] synonym: "hand phalanx" EXACT [MA:0000306] synonym: "manual phalanx" EXACT [] synonym: "phalanges of fore digit" RELATED OMO:0003004 [AAO:0000947] synonym: "phalanx of digit of hand" EXACT [OBOL:automatic] synonym: "phalanx of digitus manus" EXACT [OBOL:automatic] synonym: "phalanx of finger" EXACT [FMA:23914] synonym: "phalanx of fore digit" EXACT [] synonym: "phalanx of hand" EXACT [] synonym: "phalanx of hand digit" EXACT [OBOL:automatic] synonym: "phalanx of manual digit" EXACT [] xref: AAO:0000947 xref: EMAPA:32650 xref: FMA:23914 xref: http://mbe.oxfordjournals.org/content/26/3/613/F1.large.jpg xref: MA:0000306 xref: NCIT:C52771 xref: SCTID:181976001 xref: SCTID:361100001 xref: UMLS:C0223792 {source="ncithesaurus:Hand_Phalanx"} xref: Wikipedia:Phalanges_of_the_hand is_a: UBERON:0003221 ! phalanx is_a: UBERON:0003607 ! forelimb long bone is_a: UBERON:0004249 ! manual digit bone is_a: UBERON:0015024 ! manual digit phalanx endochondral element relationship: part_of UBERON:0010688 ! skeleton of manual acropodium relationship: part_of UBERON:5102389 ! manual digit digitopodial skeleton property_value: UBPROP:0000001 "Dumb-bell shaped bones of endochondral origin with cartilaginous epiphyses that make the four digits of the manus. The terminal phalanges are much smaller than the proximal and penultimate phalanges. The typical phalangeal formula of the manus, in a medial to lateral sequence, is 2-2-3-3.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000947", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0001437 name: epiphysis namespace: uberon def: "The head of a long bone that articulates with a neighboring skeletal element and is separated from the shaft by the epiphyseal plate until bone growth stops. At that time, the plate disappears and the head and shaft are united[MESH,modified]." [http://orcid.org/0000-0002-6601-2165, MESH:A02.835.232.251] subset: pheno_slim subset: uberon_slim synonym: "bone epiphysis" EXACT [] synonym: "end of long bone" EXACT [] synonym: "epiphyses" EXACT OMO:0003004 [] synonym: "long bone epiphysis" EXACT [] xref: AAO:0000742 xref: BTO:0000413 xref: EMAPA:35508 xref: FMA:24012 xref: MA:0001362 xref: MESH:D004838 xref: NCIT:C32529 xref: NCIT:C52722 xref: SCTID:244701002 xref: UMLS:C1708734 {source="ncithesaurus:Long_Bone_Epiphysis"} xref: Wikipedia:Epiphysis is_a: UBERON:0005055 ! zone of long bone property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg" xsd:anyURI property_value: seeAlso UBERON:0006776 property_value: UBPROP:0000001 "Cartilaginous expansion at the distal end of an anterior rib or transverse process that serves for the attachment of muscles suspending the pectoral girdle to the vertebral column.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000742", ontology="AAO", source="AAO:Pugener_2002"} property_value: UBPROP:0000001 "Subdivision of long bone which forms its expanded proximal or distal articular end; together with other the subdivisions of long bone, it constitutes the long bone. Examples: proximal epiphysis of humerus, distal epiphysis of femur." xsd:string {source="FMA:24012"} property_value: UBPROP:0000007 "epiphyseal" xsd:string property_value: UBPROP:0000007 "epiphysial" xsd:string [Term] id: UBERON:0001438 name: metaphysis namespace: uberon def: "Zone of long bone that is between the epiphysis and diaphysis. Subdivision of diaphysis which forms the proximal or distal end of diaphysis next to the epiphysis; together with diaphysis proper, it constitutes the diaphysis. Examples: proximal metaphysis of humerus, distal metaphysis of femur.[FMA]." [FMA:24014, Wikipedia:Metaphysis] subset: pheno_slim subset: uberon_slim synonym: "diaphyseal end of long bone" EXACT [] synonym: "long bone metaphysis" EXACT [] synonym: "metaphyses" EXACT OMO:0003004 [] xref: EMAPA:35509 xref: FMA:24014 xref: MA:0001363 xref: NCIT:C52723 xref: SCTID:304581004 xref: UMLS:C0222671 {source="ncithesaurus:Metaphysis"} xref: Wikipedia:Metaphysis is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004769 ! diaphysis property_value: IAO:0000116 "todo - decide - adjacent to or containing epiphyseal plate? AO Notes: FMA the metaphysis is part of the diaphysis, but not in MA." xsd:string property_value: UBPROP:0000001 "Subdivision of diaphysis which forms the proximal or distal end of diaphysis next to the epiphysis; together with diaphysis proper, it constitutes the diaphysis. Examples: proximal metaphysis of humerus, distal metaphysis of femur.[FMA]" xsd:string {source="FMA:24014"} [Term] id: UBERON:0001440 name: forelimb skeleton namespace: uberon def: "The collection of all skeletal elements in a free forelimb region. Excludes the pectoral girdle." [https://orcid.org/0000-0002-6601-2165] synonym: "bones of upper limb" EXACT [] synonym: "fore limb skeleton" EXACT [] synonym: "forelimb skeleton" EXACT [VHOG:0001256] synonym: "free upper limb skeleton" EXACT [FMA:24142] synonym: "ossa membri superioris" EXACT OMO:0003011 [FMA:24139, FMA:TA] synonym: "pectoral limb skeleton" EXACT [] synonym: "set of bones of upper limb" EXACT [] synonym: "skeleton of forelimb" EXACT [] synonym: "skeleton of free upper limb" EXACT [FMA:24142] synonym: "skeleton of pectoral limb" EXACT [] synonym: "skeleton of upper limb" EXACT [FMA:24139] synonym: "upper limb skeleton" EXACT [EHDAA2:0002222] synonym: "wing skeleton" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] xref: AAO:0000202 xref: EHDAA2:0002222 xref: EMAPA:32623 xref: FMA:24142 xref: VHOG:0001256 xref: VSAO:0000151 xref: XAO:0003061 is_a: UBERON:0004381 ! skeleton of limb is_a: UBERON:0007272 ! pectoral appendage skeleton relationship: part_of UBERON:0012475 ! skeleton of pectoral complex property_value: IAO:0000116 "TODO - find a home for: FMA:24139 ! skeleton of upper limb" xsd:string property_value: RO:0002475 UBERON:0001441 property_value: UBPROP:0000001 "Skeletal structure of the paired, anterior appendages.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000202", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship type change: differentiates_from lateral plate mesoderm (AAO:0010574) CHANGED TO: develops_from lateral plate mesoderm (UBERON:0003081)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000202", ontology="AAO"} property_value: UBPROP:0000003 "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001256", ontology="VHOG", source="ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268", source="http://bgee.unil.ch/"} [Term] id: UBERON:0001441 name: hindlimb skeleton namespace: uberon def: "Subdivision of skeleton consisting of all skeletal elements in an hindlimb region." [https://orcid.org/0000-0002-6601-2165] comment: TOOD - find a home for: FMA:24140 subset: uberon_slim synonym: "bones of lower limb" EXACT [] synonym: "free lower limb skeleton" EXACT [FMA:24144] synonym: "hind limb skeleton" EXACT [XAO:0003062] synonym: "hind-limb skeleton" EXACT [VSAO:0000152] synonym: "hindlimb skeleton" EXACT [VHOG:0001255] synonym: "lower limb skeleton" EXACT [] synonym: "ossa membri inferioris" EXACT OMO:0003011 [FMA:24140, FMA:TA] synonym: "set of bones of lower limb" EXACT [] synonym: "skeleton of free lower limb" EXACT [FMA:24144] synonym: "skeleton of lower limb" EXACT [FMA:24140] xref: AAO:0000217 xref: EHDAA2:0002226 xref: EMAPA:32633 xref: FMA:24144 xref: VHOG:0001255 xref: VSAO:0000152 xref: XAO:0003062 is_a: UBERON:0004381 ! skeleton of limb is_a: UBERON:0007273 ! pelvic appendage skeleton relationship: part_of UBERON:0012476 ! skeleton of pelvic complex property_value: UBPROP:0000001 "Skeletal structure of the paired, posterior appendages.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000217", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship type change: differentiates_from lateral plate mesoderm (AAO:0010574) CHANGED TO: develops_from lateral plate mesoderm (UBERON:0003081)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000217", ontology="AAO"} property_value: UBPROP:0000003 "Most anatomists now agree that the three proximal bones of the tetrapod limbs are homologous to the two or three proximal elements of the paired fin skeleton of other sarcopterygians, that is the humerus-femur, radius-tibia, and ulna-fibula.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001255", ontology="VHOG", source="ISBN:978-0198540472 Janvier P, Early vertebrates (1996) p.268", source="http://bgee.unil.ch/"} [Term] id: UBERON:0001442 name: skeleton of manus namespace: uberon def: "Subdivision of skeleton that is the collection of all skeletal elements in a manus, which is the distal section of the anterior forelimb skeleton consisting of the mesopodium, the metapodium and the acropodium (e.g. including the wrist, palm, and fingers)[Phenoscape]." [https://github.com/obophenotype/uberon/issues/74, https://orcid.org/0000-0002-6601-2165, PHENOSCAPE:MAH] comment: here 'manus' includes both the wrist region, metatarsal region and acropodial region subset: pheno_slim synonym: "anterior autopodium" RELATED [VSAO:0005020, VSAO:NI] synonym: "anterior autopodium skeleton" EXACT [] synonym: "bones of hand" EXACT [FMA:24159] synonym: "fore autopod skeleton" EXACT [] synonym: "forelimb autopod skeleton" EXACT [] synonym: "hand region skeleton" EXACT [EHDAA2:0002227] synonym: "hand skeleton" EXACT [FMA:24159] synonym: "manual skeleton" EXACT [] synonym: "manus" RELATED [VSAO:0005020, VSAO:NI] synonym: "manus skeleton" EXACT [] synonym: "ossa manus" EXACT OMO:0003011 [FMA:24159, FMA:TA] synonym: "set of bones of hand" EXACT [FMA:24159] synonym: "skeleton of hand" EXACT [FMA:24159] xref: EHDAA2:0002227 xref: EMAPA:32643 xref: FMA:24159 xref: VSAO:0005020 is_a: UBERON:0006717 ! autopodial skeleton relationship: part_of UBERON:0001440 {source="EHDAA2"} ! forelimb skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0001445 name: skeleton of pes namespace: uberon def: "Subdivision of skeleton that is the collection of all skeletal elements in a pes, which is the distal section of the posterior hindlimb skeleton consisting of the mesopodium, the metapodium and the acropodium (e.g. including the ankle, sole, and toes)[Phenoscape]." [https://github.com/obophenotype/uberon/issues/75, https://orcid.org/0000-0002-6601-2165, PHENOSCAPE:MAH] comment: here 'pes' includes both the ankle region, metatarsals and acropodial region subset: pheno_slim synonym: "foot region skeleton" EXACT [EHDAA2:0002228] synonym: "foot skeleton" EXACT [FMA:24222] synonym: "pedal skeleton" EXACT [] synonym: "pes" RELATED INCONSISTENT [VSAO:0005021, VSAO:NI] synonym: "pes skeleton" EXACT [] synonym: "posterior autopodium" RELATED [VSAO:0005021, VSAO:NI] synonym: "posterior autopodium skeleton" EXACT [] synonym: "set of bones of foot" EXACT [FMA:24222] synonym: "skeleton of foot" EXACT [FMA:24222] xref: EHDAA2:0002228 xref: FMA:24222 xref: VSAO:0005021 is_a: UBERON:0006717 ! autopodial skeleton relationship: part_of UBERON:0001441 {source="EHDAA2"} ! hindlimb skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0001446 name: fibula namespace: uberon def: "The major postaxial endochondral bone in the posterior zeugopod[Phenoscape]." [PHENOSCAPE:mah] subset: efo_slim subset: human_reference_atlas subset: pheno_slim subset: uberon_slim xref: AAO:0000891 xref: BTO:0002346 xref: CALOHA:TS-2203 xref: EFO:0003052 xref: EMAPA:19141 xref: FMA:24479 xref: GAID:202 xref: galen:Fibula xref: MA:0001360 xref: MESH:D005360 xref: NCIT:C12718 xref: SCTID:302529003 xref: UMLS:C0016068 {source="ncithesaurus:Fibula"} xref: Wikipedia:Fibula is_a: UBERON:0002495 {source="FMA"} ! long bone is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0004251 ! hindlimb zeugopod bone is_a: UBERON:0015013 ! fibula endochondral element relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/1/16/Illu_lower_extremity.jpg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "One of the two long bones of endochondral origin of the hind-epipodium; it is a rather more slender bone than the tibia but of about the same length.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000891", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000007 "fibular" xsd:string [Term] id: UBERON:0001447 name: tarsal bone namespace: uberon def: "A bone that is part of the tarsal skeleton. Examples: calcaneus, talus, centralia." [https://orcid.org/0000-0002-6601-2165] subset: pheno_slim subset: uberon_slim synonym: "ankle bone" EXACT [FMA:24491] synonym: "bone of ankle" EXACT [FMA:24491] synonym: "bone of tarsal skeleton" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "bone of tarsus" EXACT [FMA:24491] synonym: "bony tarsus" RELATED [BTO:0002343] synonym: "hind mesopodium" RELATED [AAO:0000220] synonym: "ossa tarsalia" EXACT OMO:0003004 [FMA:71339, FMA:TA] synonym: "ossa tarsi" EXACT OMO:0003004 [FMA:71339, FMA:TA] synonym: "tarsal" RELATED [BTO:0002343] synonym: "tarsus osseus" RELATED [BTO:0002343] xref: BTO:0002343 xref: EMAPA:25072 xref: FMA:24491 xref: GAID:194 xref: galen:TarsalBone xref: MA:0000297 xref: MESH:D013639 xref: NCIT:C12796 xref: SCTID:108372004 xref: UMLS:C0039316 {source="ncithesaurus:Tarsal_Bone"} is_a: UBERON:0003656 ! mesopodium bone is_a: UBERON:0005899 ! pes bone is_a: UBERON:0015050 ! tarsus endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/b/bf/Ankle_en.svg" xsd:anyURI property_value: UBPROP:0000008 "In primitive tetrapods, such as Trematops, the tarsus consists of three rows of bones. There are three proximal tarsals, the tibiale, intermedium, and fibulare, named for their points of articulation with the bones of the lower limb. These are followed by a second row of four bones, referred to as the centralia (singular: centrale), and then a row of five distal tarsals, each articulating with a single metatarsal. In the great majority of tetrapods, including all of those alive today, this simple pattern is modified by the loss and fusion of various of the bones.[3] In reptiles and mammals, there are normally just two proximal tarsals, the calcaneus (equivalent to the amphibian fibulare) and the talus (probably derived from a fusion of multiple bones). In mammals, including humans, the talus forms a hinge joint with the tibia, a feature especially well developed in the artiodactyls. The calcaneus is also modified, forming a heel for the attachment of the Achilles tendon. Neither of these adaptations is found in reptiles, which have a relatively simple structure to both bones.[3] The fifth distal tarsal disappears relatively early in evolution, with the remainder becoming the cuneiform and cuboid bones. Reptiles usually retain two centralia, while mammals typically have only one (the navicular).[3] In birds, the tarsus has disappeared, with the proximal tarsals having fused with the tibia, the centralia having disappeared, and the distal bones having fused with the metatarsals to form a single tarsometatarsus bone, effectively giving the leg a third segment" xsd:string {source="Wikipedia:Tarsus_(skeleton)"} [Term] id: UBERON:0001448 name: metatarsal bone namespace: uberon def: "The metatarsus or metatarsal bones are a group of five long bones in the pes located between the tarsal bones of the hind- and mid-pes and the phalanges of the toes. Lacking individual names, the metatarsal bones are numbered from the medial side (side of big toe): the first, second, third, fourth, and fifth metatarsal. The metatarsals are analogous to the metacarpal bones of the manus. [WP,unvetted]." [Wikipedia:Metatarsal_bone] subset: pheno_slim subset: uberon_slim synonym: "metatarsal" EXACT [] synonym: "ossa metatarsalia" RELATED OMO:0003004 [BTO:0002347] synonym: "ossa metatarsi" RELATED [BTO:0002347] xref: BTO:0002347 xref: EMAPA:32940 xref: EMAPA:36159 xref: FMA:24492 xref: GAID:193 xref: galen:Metatarsal xref: MA:0000303 xref: MESH:D008682 xref: NCIT:C12752 xref: SCTID:302532000 xref: UMLS:C0025584 {source="ncithesaurus:Metatarsal_Bone"} xref: Wikipedia:Metatarsal_bone is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0003821 {is_inferred="true"} ! metapodium bone is_a: UBERON:0012359 ! pedal digitopodium bone is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:0010545 ! metatarsus skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png" xsd:anyURI [Term] id: UBERON:0001449 name: phalanx of pes namespace: uberon alt_id: UBERON:0004272 def: "A phalanx that is part of a hindlimb autopod[Automatically generated definition]." [https://orcid.org/0000-0002-6601-2165, Wikipedia:Phalanges_of_the_foot] subset: pheno_slim synonym: "bone of toe" RELATED [FMA:24493] synonym: "digital bone of pes" BROAD [OBOL:automatic] synonym: "digitus pedis phalanx" EXACT [OBOL:automatic] synonym: "foot digit phalanx" EXACT [OBOL:automatic] synonym: "foot phalanx" EXACT [MA:0000305] synonym: "pedal phalanx" EXACT [] synonym: "phalanges of hind digit" RELATED OMO:0003004 [AAO:0000930] synonym: "phalanx of digit of foot" EXACT [OBOL:automatic] synonym: "phalanx of digitus pedis" EXACT [OBOL:automatic] synonym: "phalanx of foot digit" EXACT [OBOL:automatic] synonym: "phalanx of hind digit" EXACT [] synonym: "phalanx of pes" EXACT [] synonym: "phalanx of toe" EXACT [FMA:24493] synonym: "toe phalanx" EXACT [OBOL:automatic] xref: AAO:0000930 xref: EMAPA:32941 xref: FMA:24493 xref: MA:0000305 xref: NCIT:C52772 xref: ncithesaurus:Phalanx_of_the_Foot xref: SCTID:302533005 xref: UMLS:C0584876 {source="ncithesaurus:Foot_Phalanx"} xref: Wikipedia:Phalanges_of_the_foot is_a: UBERON:0003221 ! phalanx is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0004248 ! pedal digit bone is_a: UBERON:0015030 ! pedal digit phalanx endochondral element relationship: part_of UBERON:0010696 ! skeleton of pedal acropodium relationship: part_of UBERON:5101466 ! pedal digit digitopodial skeleton property_value: UBPROP:0000001 "Dumb-bell shaped bones of endochondral origin with cartilaginous epiphyses that make the five digits of the pes. The terminal phalanges are much smaller than the proximal and penultimate phalanges. The typical phalangeal formula of the pes, in a medial to lateral sequence, is 2(1)-2-3-4(3)-3(2).[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000930", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0001450 name: calcaneus namespace: uberon def: "The postaxial bone of the proximal tarsals series[Phenoscape]." [https://github.com/obophenotype/uberon/issues/72, PHENOSCAPE:mah] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "calcaneal bone" EXACT [BTO:0002355] synonym: "calcanei" RELATED OMO:0003004 [] synonym: "calcaneum" EXACT [MA:0001348] synonym: "calcaneus bone" EXACT [UBERON:cjm] synonym: "fibulare" RELATED [AAO:0000913, ISBN:0073040584, VSAO:0005016, Wikipedia:Calcaneus] synonym: "heel bone" RELATED [BTO:0002355] synonym: "os calcis" EXACT OMO:0003011 [FMA:24496] synonym: "os tarsi fibulare" RELATED [BTO:0002355] xref: BTO:0002355 xref: EMAPA:19134 xref: FMA:24496 xref: galen:Calcaneum xref: MA:0001348 xref: MESH:D002111 xref: NCIT:C32250 xref: SCTID:182099002 xref: UMLS:C0006655 {source="ncithesaurus:Calcaneum"} xref: VSAO:0005016 xref: Wikipedia:Calcaneus is_a: UBERON:0011679 ! proximal tarsal bone is_a: UBERON:0015014 ! calcaneum endochondral element property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/a/a9/Subtalar_Joint.PNG" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000007 "calcaneal" xsd:string property_value: UBPROP:0000008 "synonymous with the fibulare of basal tetrapods." xsd:string [Term] id: UBERON:0001451 name: navicular bone of pes namespace: uberon def: "The oval-shaped tarsal bone found between the talus and the 3 cuneiform bones." [MGI:llw2, MP:0009727] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "central tarsal bone" RELATED [] synonym: "centrale" BROAD [] synonym: "centrale (hind)" EXACT [AAO:0000924] synonym: "navicular" EXACT [] synonym: "navicular bone of foot" EXACT [FMA:24499] synonym: "navicular of foot" EXACT [FMA:24499] synonym: "navicular of pes" EXACT [] synonym: "os naviculare" EXACT OMO:0003011 [FMA:24499, FMA:TA] synonym: "os naviculare" RELATED OMO:0003011 [Wikipedia:Navicular_bone] synonym: "os naviculare pedis" EXACT [BTO:0002356] synonym: "os tarsi centrale" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] xref: AAO:0000924 xref: BTO:0002356 xref: EMAPA:36180 xref: FMA:24499 xref: galen:Navicular xref: MA:0001349 xref: NCIT:C33162 xref: SCTID:182100005 xref: UMLS:C0223947 {source="ncithesaurus:Navicular_Bone"} xref: Wikipedia:Navicular_bone is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0012131 ! centrale property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray276.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Oval tarsal element that is located on the center of the mesopodium. It articulates with all other elements of the tarsus except tarsal 5.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000924", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "connections vary depending on species. AAO: Oval tarsal element that is located on the center of the mesopodium. It articulates with all other elements of the tarsus except tarsal 5. In humans: there is a cuboid instead of distal tarsal 4 and 5 - may articulate laterally with the cuboid" xsd:string {source="WP"} [Term] id: UBERON:0001452 name: distal tarsal bone 1 namespace: uberon def: "Endochondral tarsal bone articulating with centralia and metatarsal 1." [VSAO:0005052, Wikipedia:Medial_cuneiform_bone] subset: human_reference_atlas subset: uberon_slim synonym: "1st cuneiform" RELATED [EMAPA:36176] synonym: "cuneiforme 1" EXACT [VSAO:0005052] synonym: "distal tarsal 1" RELATED [VSAO:0005052] synonym: "distal tarsal 1 bone" EXACT SYSTEMATIC [UBERON:cjm] synonym: "entocuneiforme" EXACT [VSAO:0005052] synonym: "first cuneiform" EXACT [Wikipedia:Medial_cuneiform_bone] synonym: "first cuneiform bone" EXACT [FMA:24518] synonym: "foot distal carpal bone 1" RELATED [] synonym: "medial cuneiform" EXACT [FMA:24518] synonym: "medial cuneiform bone" EXACT [FMA:24518] synonym: "os cuneiform primum" RELATED OMO:0003011 [Wikipedia:Medial_cuneiform_bone] synonym: "os cuneiforme mediale" EXACT OMO:0003011 [FMA:TA, NominaAnatomicaVeterinaria:2005] synonym: "os cuneiforme mediale" RELATED OMO:0003011 [Wikipedia:Medial_cuneiform_bone] synonym: "os cuneiforme primum" RELATED [BTO:0002360] synonym: "os tarsale I" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "ossa cuneiforme mediale" RELATED [BTO:0002360] synonym: "tarsal 1" EXACT [AAO:0000918] xref: AAO:0000918 xref: BTO:0002360 xref: EMAPA:36176 xref: FMA:24518 xref: galen:MedialCuneiform xref: http://palaeos.com/vertebrates/glossary/images/450x218xEctocuneiform.gif.pagespeed.ic.kaiuLYQELL.png xref: MA:0001352 xref: NCIT:C32840 xref: SCTID:182116007 xref: UMLS:C1512869 {source="ncithesaurus:Internal_Cuneiform_Bone_of_the_Foot"} xref: VSAO:0005052 xref: Wikipedia:Medial_cuneiform_bone is_a: UBERON:0010721 ! distal tarsal bone is_a: UBERON:0015102 ! distal tarsal bone 1 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/8/81/Gray290.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Small element that articulates with the prehallux, metatarsal I and element Y. It may be fused to tarsal 2.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000918", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0001453 name: distal tarsal bone 2 namespace: uberon def: "Endochondral tarsal bone articulating with centralia and metatarsal 2." [VSAO:0005053, Wikipedia:Intermediate_cuneiform_bone] comment: The intermediate cuneiform (also known as second cuneiform / middle cuneiform) is shaped like a wedge, the thin end pointing downwards. It is situated between the other two cuneiforms (the medial and lateral cuneiforms), and articulates with the navicular posteriorly, the second metatarsal anteriorly and with the other cuneiforms on either side. [WP,unvetted] subset: human_reference_atlas subset: uberon_slim synonym: "2nd cuneiform" RELATED [EMAPA:36177] synonym: "cuneiforme 2" EXACT [VSAO:0005053] synonym: "distal tarsal 2" RELATED [VSAO:0005053] synonym: "distal tarsal 2 bone" EXACT SYSTEMATIC [UBERON:cjm] synonym: "foot distal carpal bone 2" RELATED [] synonym: "intermediate cuneiform" EXACT [] synonym: "intermediate cuneiform bone" RELATED [FMA:24519] synonym: "mesocuneiforme" EXACT [VSAO:0005053] synonym: "middle cuneiform" EXACT [] synonym: "middle cuneiform bone of foot" EXACT [] synonym: "os cuneiforme intermedium" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "os cuneiforme intermedium" RELATED OMO:0003011 [BTO:0002359, Wikipedia:Intermediate_cuneiform_bone] synonym: "os cuneiforme secundum" RELATED OMO:0003011 [BTO:0002359, Wikipedia:Intermediate_cuneiform_bone] synonym: "os tarsale II" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "second cuneiform bone" EXACT [] synonym: "second cuneiform bone of foot" EXACT [] synonym: "tarsal 2" EXACT [AAO:0000919] xref: AAO:0000919 xref: BTO:0002359 xref: EMAPA:36177 xref: FMA:24519 xref: galen:IntermediateCuneiform xref: MA:0001353 xref: NCIT:C33116 xref: SCTID:179512006 xref: UMLS:C1513292 {source="ncithesaurus:Middle_Cuneiform_Bone_of_the_Foot"} xref: VSAO:0005053 xref: Wikipedia:Intermediate_cuneiform_bone is_a: UBERON:0010721 ! distal tarsal bone is_a: UBERON:0015105 ! distal tarsal bone 2 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Small element that articulates anteriorly with metatarsal II. It may be fused to tarsal 1 or to tarsal 3.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000919", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0001454 name: distal tarsal bone 3 namespace: uberon def: "Endochondral tarsal bone articulating with centralia and metatarsal 3." [VSAO:0005054, Wikipedia:Lateral_cuneiform_bone] comment: The lateral cuneiform (also known as third cuneiform / external cuneiform) intermediate in size between the other two cuneiform bones, is also wedge-shaped, the base being uppermost. It occupies the center of the front row of the tarsal bones, between the second cuneiform medially, the cuboid laterally, the navicular posteriorly and the third metatarsal in front. [WP,unvetted] subset: human_reference_atlas subset: uberon_slim synonym: "3rd cuneiform" RELATED [EMAPA:36178] synonym: "cuneiforme 3" EXACT [VSAO:0005054] synonym: "distal tarsal 3" RELATED [VSAO:0005054] synonym: "distal tarsal 3 bone" EXACT SYSTEMATIC [UBERON:cjm] synonym: "ectocuneiforme" EXACT [VSAO:0005054] synonym: "external cuneiform" EXACT [Wikipedia:Lateral_cuneiform_bone] synonym: "external cuneiform bone of foot" EXACT [] synonym: "foor distal carpal bone 3" RELATED [] synonym: "lateral cuneiform" EXACT [] synonym: "lateral cuneiform bone" EXACT [FMA:24520] synonym: "os cuneiforme laterale" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "os cuneiforme laterale" RELATED OMO:0003011 [Wikipedia:Lateral_cuneiform_bone] synonym: "os cuneiforme tertium" RELATED OMO:0003011 [Wikipedia:Lateral_cuneiform_bone] synonym: "os tarsale III" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "ossa cuneiforme laterale" RELATED [BTO:0002358] synonym: "tarsal 3" EXACT [AAO:0000920] synonym: "third cuneiform bone" EXACT [] xref: AAO:0000920 xref: BTO:0002358 xref: EMAPA:36178 xref: FMA:24520 xref: galen:LateralCuneiform xref: MA:0001354 xref: NCIT:C32554 xref: SCTID:182117003 xref: UMLS:C1517036 {source="ncithesaurus:External_Cuneiform_Bone_of_the_Foot"} xref: VSAO:0005054 xref: Wikipedia:Lateral_cuneiform_bone is_a: UBERON:0010721 ! distal tarsal bone is_a: UBERON:0015108 ! distal tarsal bone 3 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Small element that articulates anteriorly with metatarsal III. It may be fused to tarsal 2.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000920", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000005 "In some types, the cuneiform is found as two or three bones, in which case the more anterior ('dorsal' in dorsal/plantar terminology) is the ectocuneiform, while the more posterior or plantar bones are the mesocuneiform and entocuneiform.[Palaeos]" xsd:string {date_retrieved="2012-09-17", source="http://palaeos.com/vertebrates/glossary/glossaryE.html"} [Term] id: UBERON:0001455 name: cuboid bone namespace: uberon def: "A tarsal bone that is formed from distal tarsals 4 and 5. [WP,modified]." [Wikipedia:Cuboid_bone] subset: human_reference_atlas subset: uberon_slim synonym: "cuboid" EXACT [] synonym: "cuboideum" RELATED [] synonym: "distal tarsal bones 4 and 5" RELATED [] synonym: "foot distal tarsal bone 4 and 5" RELATED [] synonym: "os cuboideum" RELATED OMO:0003011 [BTO:0002357, Wikipedia:Cuboid_bone] synonym: "os tarsale IV et V" RELATED OMO:0003011 [http://orcid.org/0000-0002-6601-2165] xref: BTO:0002357 xref: EMAPA:36175 xref: FMA:24527 xref: galen:Cuboid xref: MA:0001355 xref: NCIT:C32414 xref: SCTID:182101009 xref: UMLS:C0376381 {source="ncithesaurus:Cuboid_Bone"} xref: Wikipedia:Cuboid_bone is_a: UBERON:0010721 ! distal tarsal bone property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/1/18/Gray274.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000013 "NominaAnatomicaVeterinaria uses os cuboideum as an official synonym for distal tarsal IV, but some sources also use this as the label for the human cuboid bone which is regarded to be formed from tarsals IV and V. We therefore decline to use exact syns in either case." xsd:string [Term] id: UBERON:0001470 name: glenohumeral joint namespace: uberon def: "The glenohumeral joint, commonly known as the shoulder joint, is a multiaxial synovial ball and socket joint and involves articulation between the glenoid fossa of the scapula (shoulder blade) and the head of the humerus (upper arm bone). [WP,unvetted]." [Wikipedia:Glenohumeral_joint] subset: uberon_slim synonym: "articulatio humeri" EXACT OMO:0003011 [FMA:25912, FMA:TA] synonym: "humeral joint" EXACT [FMA:25912] synonym: "humeroscapular joint" RELATED [Wikipedia:Glenohumeral_joint] synonym: "joint of shoulder" BROAD [OBOL:automatic] synonym: "shoulder joint" BROAD [MA:0000459] xref: EMAPA:19105 xref: FMA:25912 xref: GAID:269 xref: galen:ShoulderJoint xref: MA:0000459 xref: MESH:D012785 xref: NCIT:C33548 xref: SCTID:182168000 xref: UMLS:C0037009 {source="ncithesaurus:Shoulder_Joint"} xref: VHOG:0001002 xref: Wikipedia:Glenohumeral_joint relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/a3/Gray327.png" xsd:anyURI property_value: IAO:0000116 "note that in this ontology 'glenoid fossa' is a cavity (consistent with FMA) - consider adding a class for the surface of the scapula that is adjacent to this cavity, and making a more explicit connects relationship" xsd:string property_value: UBPROP:0000012 "in FMA, this is part of the bony pectoral girdle, alongside the skeleton of pectoral girdle" xsd:string {external_ontology="FMA"} [Term] id: UBERON:0001480 name: proximal carpal bone namespace: uberon def: "A carpal bone that proximally_connected_to a forelimb zeugopod skeleton." [OBOL:automatic] xref: EMAPA:36164 xref: FMA:33302 xref: MA:0002557 xref: SCTID:306715004 is_a: UBERON:0001435 ! carpal bone is_a: UBERON:0014395 ! proximal mesopodial bone is_a: UBERON:0015078 ! proximal carpal endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0001481 name: distal carpal bone namespace: uberon def: "A distal carpal endochondral element that is composed primarily of a bone tissue." [OBOL:automatic] synonym: "distal carpal" EXACT [AAO:0000847] xref: AAO:0000847 xref: EMAPA:36168 xref: FMA:33303 xref: MA:0002558 xref: SCTID:306716003 is_a: UBERON:0001435 ! carpal bone is_a: UBERON:0015068 ! distal carpal endochondral element is_a: UBERON:0018102 ! distal mesopodial bone relationship: part_of UBERON:0009880 ! carpal skeleton property_value: UBPROP:0000001 "Series of elements that articulate with the metacarpals.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000847", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "Primitively, each of the distal bones appears to have articulated with a single metacarpal" xsd:string {source="WP"} [Term] id: UBERON:0002091 name: appendicular skeleton namespace: uberon def: "Subdivision of skeleton which which consists of all the skeletal elements in in the pectoral and pelvic appendage complexes[cjm]." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003, Wikipedia:Appendicular_skeleton] subset: efo_slim subset: human_reference_atlas subset: pheno_slim subset: uberon_slim subset: vertebrate_core synonym: "appendicular skeleton" EXACT [] synonym: "entire appendicular skeleton" EXACT [https://github.com/obophenotype/uberon/issues/59] synonym: "paired fin skeleton" NARROW SENSU [] synonym: "skeleton appendiculare" RELATED OMO:0003011 [Wikipedia:Appendicular_skeleton] xref: AAO:0000747 xref: EFO:0000951 xref: EMAPA:32729 xref: FMA:71222 xref: MA:0000290 xref: MAT:0000278 xref: MIAA:0000278 xref: NCIT:C49477 xref: SCTID:322050006 xref: UMLS:C0222646 {source="ncithesaurus:Appendicular_Skeleton"} xref: VSAO:0000076 xref: Wikipedia:Appendicular_skeleton xref: XAO:0003166 is_a: UBERON:0010912 ! subdivision of skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/7/7c/Appendicular_skeleton_diagram.svg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Appendages-and-the-appendicular-skeleton" xsd:anyURI property_value: UBPROP:0000001 "Skeletal subdivision consisting of all the skeletal elements in the pectoral and pelvic appendage complexes.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000076", ontology="VSAO", source="PSPUB:0000170", source="https://orcid.org/0000-0002-6601-2165"} property_value: UBPROP:0000001 "Skeletal system that consists of the paired fins (pectoral or pelvic fins).[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000027", ontology="TAO", source="TAO:wd"} property_value: UBPROP:0000001 "The pectoral and pelvic girdles, which articulate with the axial skeleton, together with their associated limbs, the forelimbs and hind limbs, form the appendicular skeleton.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000747", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000012 "ontologies differ in whether they treat the term appendicular skeleton as being the entire set of bones in the limbs, or whether the fore and hind limbs/fins are treated as seperate appendicular skeletons. Here we follow FMA, and treat the appendicular skeleton as the sum total of skeletal elements in the organism (this is evidenced by the fact that in FMA, skeleton of left/right upper/lower limb is part_of a appendicular skeleton, and subtypes of 'subdivision of appendicular skeleton'). We have separate classes such as 'skeleton of limb', and 'skeleton of hindlimb' for the 4 parts of the appendicular skeleton. In future the ZFA/TAO classes may be moved." xsd:string {external_ontology="FMA"} [Term] id: UBERON:0002234 name: proximal phalanx of manus namespace: uberon def: "A proximal phalanx that is part of a finger [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "hand proximal phalanx" EXACT [MA:0001395] synonym: "phalanx proximalis manus" EXACT OMO:0003011 [FMA:75816, FMA:TA] synonym: "proximal manual phalanx" EXACT [] synonym: "proximal phalanx of finger" EXACT [FMA:75816] synonym: "proximal phalanx of fore digit" EXACT [] synonym: "proximal phalanx of hand" EXACT [] synonym: "proximal phalanx of manual digit" EXACT [] xref: EMAPA:37307 {source="MA:th"} xref: FMA:75816 xref: MA:0001395 xref: NCIT:C52786 xref: SCTID:181986000 xref: SCTID:361325003 xref: UMLS:C0730117 {source="ncithesaurus:Proximal_Phalanx_of_Hand"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5102389 ! manual digit digitopodial skeleton [Term] id: UBERON:0002374 name: metacarpal bone namespace: uberon def: "A bone that is part of the metacarpal skeleton." [https://orcid.org/0000-0002-6601-2165, Wikipedia:Metacarpal_bone] subset: efo_slim subset: pheno_slim subset: uberon_slim synonym: "metacarpal" EXACT [] xref: EFO:0003886 xref: EMAPA:36158 xref: FMA:9612 xref: galen:Metacarpal xref: MA:0000302 xref: NCIT:C12751 xref: SCTID:181977005 xref: SCTID:425761003 xref: UMLS:C0025526 {source="ncithesaurus:Metacarpal_Bone"} xref: Wikipedia:Metacarpal_bone is_a: UBERON:0003607 ! forelimb long bone is_a: UBERON:0003821 {is_inferred="true"} ! metapodium bone is_a: UBERON:0012358 ! manual digitopodium bone is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:0010544 ! metacarpus skeleton property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg" xsd:anyURI [Term] id: UBERON:0002395 name: talus namespace: uberon def: "A proximal tarsal bone resulting from fusion of intermedium and fibulare." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Talus_bone] subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "astragaloid bone" RELATED [BTO:0002354] synonym: "astragalus" RELATED [ISBN:0073040584, MA:000135, Wikipedia:Talus_bone] synonym: "astragalus bone" RELATED [ISBN:0073040584, Wikipedia:Talus_bone] synonym: "major ankle bone" RELATED [] synonym: "os tarsi tibiale" RELATED [BTO:0002354] synonym: "os trigonum" RELATED [Wikipedia:Talus_bone] xref: BTO:0002354 xref: EMAPA:19135 xref: FMA:9708 xref: GAID:196 xref: galen:Talus xref: MA:0001351 xref: MESH:D013628 xref: NCIT:C52799 xref: SCTID:182098005 xref: UMLS:C0039277 {source="ncithesaurus:Talus"} xref: Wikipedia:Talus_bone is_a: UBERON:0011679 ! proximal tarsal bone property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/a/a9/Subtalar_Joint.PNG" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "The talus is apparently derived from the fusion of three separate bones in the feet of primitive amphibians; the tibiale, articulating with tibia, the intermedium, between the bases of the tibia and fibula, and the fourth centrale, lying in the mid-part of the tarsus. These bones are still partially separate in modern amphibians, which therefore do not have a true talus. The talus forms a considerably more flexible joint in mammals than it does in reptiles. This reaches its greatest extent in artiodactyls, where the distal surface of the bone has a smooth keel to allow greater freedom of movement of the foot, and thus increase running speed" xsd:string {source="WP"} [Term] id: UBERON:0002428 name: limb bone namespace: uberon def: "A bone that is part of a limb [Automatically generated definition]." [OBOL:automatic] subset: efo_slim subset: pheno_slim synonym: "bone of extremity" EXACT [] synonym: "bone of limb" EXACT [OBOL:automatic] synonym: "free limb bone" EXACT [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] xref: EFO:0000945 xref: MAT:0000151 xref: MIAA:0000151 xref: NCIT:C32223 xref: SCTID:304149004 xref: UMLS:C0582791 {source="ncithesaurus:Bone_of_the_Extremity"} is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:0015061 ! limb endochondral element relationship: part_of UBERON:0004381 ! skeleton of limb property_value: IAO:0000232 "the formal definition is very inclusive, and includes sesamoids" xsd:string property_value: UBPROP:0000012 "NCITA includes clavicle. MA:'limb bone' is actually a bone of limb or girdle" xsd:string {external_ontology="NCIT"} [Term] id: UBERON:0002445 name: ulnare namespace: uberon def: "The postaxial bone of the proximal carpal region. Found in close approximation to the ulna, often in articulation[PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/114, PHENOSCAPE:ad] subset: human_reference_atlas subset: uberon_slim synonym: "cuneiform bone of hand" EXACT [] synonym: "cuneiform bone of manus" EXACT [] synonym: "cuneiform of hand" RELATED [MA:0001347] synonym: "os triquetrum" EXACT OMO:0003011 [FMA:23715, FMA:TA] synonym: "os ulnare" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "triangular" RELATED [MA:0001347] synonym: "triangular bone" EXACT [] synonym: "triquetral" EXACT [MA:0001347, NCBITaxon:9606] synonym: "triquetral bone" EXACT [] synonym: "triquetrum" RELATED [MA:0001347] synonym: "ulnar carpal bone" RELATED [MA:0001347] xref: AAO:0000845 xref: EMAPA:36167 xref: FMA:23715 xref: galen:Triquetral xref: MA:0001347 xref: NCIT:C12858 xref: SCTID:181965000 xref: UMLS:C0223739 {source="ncithesaurus:Triangular_Bone"} xref: Wikipedia:Triquetral is_a: UBERON:0001480 ! proximal carpal bone property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/50/Carpus.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "One of two element that constitute the basal row of carpals. It articulates with the ulna, radius, radiale, centrale (element Y), and carpal 5(4). This element originates from one condensation center or the fusion of two elements (ulnare and intermedium). Occasionally it may fuse to carpal 5(4), the radiale, or other elements.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000845", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000013 "this bone is termed the triquetral bone in some mammalian taxa, notably humans" xsd:string [Term] id: UBERON:0002446 name: patella namespace: uberon def: "A large sesamoid bone found in the distal femur/proximal tibial region of the hindlimb of tetrapods. The patella is the attachment site for proximal hindlimb tendons.[PHENOSCAPE:ad]." [https://sourceforge.net/tracker/?func=detail&atid=1205376&aid=3470151&group_id=76834, PHENOSCAPE:ad] comment: The patella, also known as the knee cap or kneepan, is the largest sesamoid bone in the human body. The primary functional role of the patella is knee extension. The patella has convergently evolved in placental mammals and birds; marsupials have only rudimentary, non-ossified patellae. In more primitive tetrapods, including living amphibians and reptiles, the muscle tendons from the upper leg are attached directly to the tibia, and the patella is not present. See also: fabella. subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "knee bone" RELATED [FMA:24485] synonym: "knee cap" RELATED [Wikipedia:Patella] synonym: "patella" RELATED OMO:0003011 [Wikipedia:Patella] xref: EMAPA:35668 xref: FMA:24485 xref: GAID:203 xref: galen:Patella xref: MA:0001374 xref: MESH:D010329 xref: NCIT:C33282 xref: SCTID:182083008 xref: UMLS:C0030647 {source="ncithesaurus:Patella"} xref: Wikipedia:Patella is_a: UBERON:0005893 ! leg bone is_a: UBERON:0011141 ! appendicular ossicle relationship: part_of UBERON:0001441 ! hindlimb skeleton property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000007 "patellar" xsd:string [Term] id: UBERON:0002495 name: long bone namespace: uberon def: "A long bone is a bone that has a shaft and 2 ends and is longer than it is wide. Long bones have a thick outside layer of compact bone and an inner medullary cavity containing bone marrow. The ends of a long bone contain spongy bone and an epiphyseal plate or line depending on the stage of development. The epiphyseal plate is a hyaline cartilage, where new bone growth takes place, lengthening the bone prior to adulthood. Bone lengthening ceases when this cartilage is lost, leaving a remnant referred to as an epiphyseal line." [https://medlineplus.gov/ency/imagepages/9582.htm, Wikipedia:Long_bone] {seeAlso="https://github.com/obophenotype/uberon/issues/32", seeAlso="https://github.com/obophenotype/uberon/issues/2010"} comment: Endochondral_ossification is an essential process during the rudimentary formation of long bones, with the exception of the clavicle[Wikipedia:Endochondral_ossification]. The medial and and lateral ends undergo EO, the mid-portion is formed by a process with features of EO & IO (the process is shared by the mandible)[ISBN:9780397517251] subset: pheno_slim subset: uberon_slim synonym: "os longum" RELATED [BTO:0004256] xref: BTO:0004256 xref: EMAPA:35503 xref: FMA:7474 xref: galen:LongBone xref: MA:0002802 xref: NCIT:C33003 xref: SCTID:332709000 xref: UMLS:C0222647 {source="ncithesaurus:Long_Bone"} xref: Wikipedia:Long_bone relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/wdahdul [Term] id: UBERON:0002497 name: acromion namespace: uberon def: "Region of the scapula where the latter meets with the clavicle: attachment point of the clavicle to the scapula in some taxa." [VSAO:0005067] subset: pheno_slim subset: uberon_slim synonym: "acromion of scapula" RELATED [Wikipedia:Acromion] synonym: "acromion of the scapula" RELATED [Wikipedia:Acromion] synonym: "acromion process" EXACT [VSAO:0005067] synonym: "scapular acromion" EXACT [VSAO:0005067] xref: AAO:0000826 xref: EMAPA:25119 xref: FMA:23260 xref: GAID:187 xref: MA:0002805 xref: MESH:D000174 xref: NCIT:C32048 xref: SCTID:181911000 xref: UMLS:C0001209 {source="ncithesaurus:Acromion"} xref: VSAO:0005067 xref: Wikipedia:Acromion relationship: part_of UBERON:0006849 ! scapula property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/7/79/Gray206.png" xsd:anyURI property_value: UBPROP:0000001 "Anterior rounded projection of the pars acromialis of the scapula.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000826", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: part_of pars acromialis (AAO:0000752)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000826", ontology="AAO"} [Term] id: UBERON:0002498 name: deltopectoral crest namespace: uberon def: "A rough elevation at the middle of the lateral side of the shaft of the humerus to which the deltoid muscle attaches." [ISBN:0-683-40008-8, MP:0004353] subset: pheno_slim subset: uberon_slim synonym: "crista ventralis" EXACT [AAO:0000736] synonym: "crista ventralis humeri" RELATED [AAO:0000736] synonym: "deltoid crest" EXACT [AAO:0000736, MP:0004353] synonym: "deltoid eminence" EXACT [MP:0004353] synonym: "deltoid impression" EXACT [MP:0004353] synonym: "deltoid process" RELATED [MP:0004353] synonym: "deltoid tuberosity" EXACT [FMA:23418] synonym: "deltoid tuberosity of humerus" EXACT [FMA:23418] synonym: "pectoral process" RELATED [] synonym: "tuberositas deltoidea" EXACT OMO:0003011 [FMA:23418, FMA:TA] synonym: "tuberositas deltoidea (corpus humeri)" EXACT [] synonym: "tuberositas deltoidea humeri" EXACT OMO:0003011 [Wikipedia:Deltoid_tuberosity] xref: AAO:0000736 xref: EMAPA:25052 xref: FMA:23418 xref: MA:0002808 xref: Wikipedia:Deltoid_tuberosity relationship: part_of UBERON:0004652 ! humerus diaphysis property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/a7/HumerusFront.png" xsd:anyURI property_value: UBPROP:0000008 "In basal Tetrapodomorph lineages often the deltoid process and the pectoral processes are separate and thus should not be made exact synonyms to the deltopectoral crest.[PHENOSCAPE:ad]" xsd:string [Term] id: UBERON:0002503 name: greater trochanter namespace: uberon def: "The greater trochanter (great trochanter) of the femur is a large, irregular, quadrilateral eminence and a part of the skeletal system. It is directed a little lateralward and backward, and, in the adult, is about 1 cm lower than the head. Because the pelvic outlet in the female is larger than in the male, there is a greater distance between the greater trochanters in the female. It has two surfaces and four borders. [WP,unvetted]." [Wikipedia:Greater_trochanter] subset: uberon_slim synonym: "great trochanter" EXACT [] synonym: "greater trochanter of femur" EXACT [] synonym: "trochanter major" RELATED OMO:0003011 [Wikipedia:Greater_trochanter] xref: EMAPA:37594 {source="MA:th"} xref: FMA:32852 xref: galen:GreaterTrochanter xref: MA:0002822 xref: NCIT:C32698 xref: SCTID:182050001 xref: UMLS:C0223865 {source="ncithesaurus:Great_Trochanter"} xref: Wikipedia:Greater_trochanter is_a: UBERON:0000980 ! trochanter relationship: part_of UBERON:0004412 {source="FMA"} ! proximal epiphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png" xsd:anyURI [Term] id: UBERON:0002504 name: lesser trochanter namespace: uberon def: "The lesser trochanter (small trochanter) of the femur is a conical eminence, which varies in size in different subjects [WP,unvetted]." [Wikipedia:Lesser_trochanter] subset: pheno_slim subset: uberon_slim synonym: "lesser trochanter of femur" EXACT [] synonym: "trochanter minor" RELATED OMO:0003011 [Wikipedia:Lesser_trochanter] xref: EMAPA:37595 {source="MA:th"} xref: FMA:32853 xref: galen:LesserTrochanter xref: MA:0002823 xref: NCIT:C32982 xref: SCTID:182051002 xref: UMLS:C0223866 {source="ncithesaurus:Lesser_Trochanter"} xref: Wikipedia:Lesser_trochanter is_a: UBERON:0000980 ! trochanter relationship: part_of UBERON:0004412 {source="FMA"} ! proximal epiphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png" xsd:anyURI [Term] id: UBERON:0002516 name: epiphyseal plate namespace: uberon def: "A hyaline cartilage plate in the metaphysis at each end of a long bone. The plate is found in children and adolescents; in adults, who have stopped growing, the plate is replaced by an epiphyseal line." [Wikipedia:Epiphyseal_plate] subset: pheno_slim subset: uberon_slim synonym: "cartilago epiphysialis" RELATED [BTO:0000412] synonym: "epiphyseal cartilage" RELATED [] synonym: "epiphyseal disk" RELATED [BTO:0000412] synonym: "epiphyseal growth disk" RELATED [BTO:0000412] synonym: "epiphyseal growth plate" EXACT [] synonym: "epiphyseal growth plate cartilage" EXACT [] synonym: "epiphysial plate" EXACT [FMA:75427] synonym: "growth plate" RELATED [MA:0002839] synonym: "lamina epiphysialis" RELATED OMO:0003011 [Wikipedia:Epiphyseal_plate] synonym: "long bone epiphyseal plate" EXACT [MA:0002839] synonym: "physis" RELATED [BTO:0000412] xref: BTO:0000412 xref: EMAPA:35505 xref: FMA:75427 xref: GAID:191 xref: MA:0002839 xref: MESH:D006132 xref: SCTID:84349008 xref: Wikipedia:Epiphyseal_plate relationship: part_of UBERON:0001438 ! metaphysis property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/7/7a/Tib_fib_growth_plates.jpg" xsd:anyURI property_value: IAO:0000116 "consider splitting this class into the epiphyseal plates of long bones and vertebrae" xsd:string [Term] id: UBERON:0003221 name: phalanx namespace: uberon def: "Endochondral bones that are often elongate and arranged in rows of articulating elements, and form the visible part of the digits." [VSAO:0000199, Wikipedia:Phalanx_bones] subset: pheno_slim synonym: "digit long bone" EXACT [OBOL:automatic] synonym: "long bone of digit" EXACT [OBOL:automatic] synonym: "phalange" EXACT [] synonym: "phalanges" EXACT OMO:0003004 [] synonym: "phalanx bone" EXACT [Wikipedia:Phalanx_bones] xref: CALOHA:TS-2211 xref: EMAPA:32614 xref: FMA:321661 xref: galen:Phalanx xref: MA:0000304 xref: NCIT:C33317 xref: SCTID:290029003 xref: UMLS:C0222682 {source="ncithesaurus:Phalanx"} xref: VSAO:0000199 xref: Wikipedia:Phalanx_bones is_a: UBERON:0003606 ! limb long bone is_a: UBERON:0012357 ! digitopodium bone is_a: UBERON:0015023 ! phalanx endochondral element relationship: part_of UBERON:5102544 ! individual digit of digitopodial skeleton property_value: UBPROP:0000007 "phalangeal" xsd:string property_value: UBPROP:0000008 "In primates such as humans and monkeys, the thumb and big toe have two phalanges, while the other fingers and toes consist of three" xsd:string {source="WP"} [Term] id: UBERON:0003460 name: arm bone namespace: uberon def: "A bone that is part of the region of the forelimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia." [https://orcid.org/0000-0002-6601-2165] subset: human_reference_atlas synonym: "arm bone organ" EXACT [OBOL:automatic] synonym: "bone of arm" EXACT [OBOL:automatic] synonym: "bone of upper extremity" RELATED [GAID:178] synonym: "bone organ of arm" EXACT [OBOL:automatic] xref: EMAPA:37303 {source="MA:th"} xref: MA:0000592 xref: MESH:D050280 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration", author:id="https://orcid.org/0000-0001-9439-5346", mapping:provider="https://github.com/biopragmatics/biomappings"} is_a: UBERON:0008962 ! forelimb bone relationship: part_of UBERON:0001440 ! forelimb skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0003461 name: shoulder bone namespace: uberon def: "A bone that is connected via a shoulder joint (i.e. glenohumeral or acromioclavicular joints). The shoulder bones are the clavicle, scapula and humerus - but note that these are only considered to be shoulder bones when a true shoulder is present, as in most tetrapods." [http://orcid.org/0000-0002-6601-2165] subset: pheno_slim synonym: "bone of shoulder" EXACT [OBOL:automatic] synonym: "shoulder-articulating bone" EXACT [] xref: MA:0000631 is_a: UBERON:0010741 {notes="UBERONREF:0000003", source="MA"} ! bone of pectoral complex relationship: part_of UBERON:0012475 ! skeleton of pectoral complex property_value: UBPROP:0000012 "this is a forelimb bone in MA, but this would lead to part-disjointness violations." xsd:string {external_ontology="MA"} [Term] id: UBERON:0003464 name: hindlimb bone namespace: uberon def: "A bone that is part of a hindlimb region. Examples: any pes phalanx, femur. Counter-examples: ischium, pubis (they are part of the pelvic girdle)." [https://orcid.org/0000-0002-6601-2165] subset: efo_slim synonym: "bone of hind limb" EXACT [OBOL:automatic] synonym: "bone of hindlimb" EXACT [OBOL:automatic] synonym: "bone of inferior member" EXACT [OBOL:automatic] synonym: "bone of lower extremity" EXACT [OBOL:automatic] synonym: "bone organ of hind limb" EXACT [OBOL:automatic] synonym: "bone organ of hindlimb" EXACT [OBOL:automatic] synonym: "bone organ of lower extremity" EXACT [OBOL:automatic] synonym: "hind limb bone" EXACT [OBOL:automatic] synonym: "hind limb bone organ" EXACT [OBOL:automatic] synonym: "hindlimb bone organ" EXACT [OBOL:automatic] xref: EFO:0003842 xref: GAID:198 xref: NCIT:C12982 xref: SCTID:361370006 xref: UMLS:C0448188 {source="ncithesaurus:Bone_of_the_Lower_Extremity"} is_a: UBERON:0002428 ! limb bone is_a: UBERON:0010742 ! bone of pelvic complex is_a: UBERON:0015022 ! hindlimb endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton property_value: UBPROP:0000012 "the MA class is actually bone of pelvic complex; in contrast the NCIT class excludes ilium etc" xsd:string {external_ontology="MA"} [Term] id: UBERON:0003466 name: forelimb zeugopod bone namespace: uberon def: "A bone that is part of a lower arm [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "antebrachial region bone" EXACT [OBOL:automatic] synonym: "antebrachial region bone organ" EXACT [OBOL:automatic] synonym: "arm zeugopod bone" EXACT [OBOL:automatic] synonym: "arm zeugopod bone organ" EXACT [OBOL:automatic] synonym: "lower arm bone" EXACT [MA:0000598] synonym: "wing zeugopod bone" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] synonym: "zeugopod bone, forelimb" EXACT [OBOL:automatic] synonym: "zeugopod bone, upper" EXACT [OBOL:automatic] xref: EMAPA:35347 xref: MA:0000598 is_a: UBERON:0003460 ! arm bone relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton [Term] id: UBERON:0003467 name: sesamoid bone of gastrocnemius namespace: uberon def: "A small sesamoid bone situated behind a condyle of the femur." [https://sourceforge.net/tracker/?func=detail&atid=1205376&aid=3470151&group_id=76834, MP:0009005, Wikipedia:Fabella] subset: pheno_slim synonym: "fabella" RELATED [MA:0001378, NominaAnatomicaVeterinaria:2005] synonym: "gastrocnemius sesamoid bone" EXACT [OBOL:automatic] synonym: "m. gastrocnemius sesamoid bone" EXACT [OBOL:automatic] synonym: "ossa sessamoidea m. gastrocnemii" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "sesamoid bone of m. gastrocnemius" EXACT [OBOL:automatic] xref: EMAPA:35771 xref: FMA:281591 xref: galen:Fabella xref: MA:0001378 xref: SCTID:302749009 xref: Wikipedia:Fabella is_a: UBERON:0004251 ! hindlimb zeugopod bone is_a: UBERON:0011141 ! appendicular ossicle [Term] id: UBERON:0003606 name: limb long bone namespace: uberon def: "A long bone that is part of a limb [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "long bone of limb" EXACT [OBOL:automatic] xref: EMAPA:35495 xref: MA:0000298 is_a: UBERON:0002428 ! limb bone is_a: UBERON:0002495 ! long bone [Term] id: UBERON:0003607 name: forelimb long bone namespace: uberon def: "A long bone that is part of a forelimb [Automatically generated definition]." [OBOL:automatic] synonym: "anteriormost limb long bone" EXACT [OBOL:automatic] synonym: "fore limb long bone" EXACT [OBOL:automatic] synonym: "long bone of anteriormost limb" EXACT [OBOL:automatic] synonym: "long bone of fore limb" EXACT [OBOL:automatic] synonym: "long bone of forelimb" EXACT [OBOL:automatic] synonym: "long bone of superior member" EXACT [OBOL:automatic] synonym: "long bone of upper extremity" EXACT [OBOL:automatic] synonym: "superior member long bone" EXACT [OBOL:automatic] synonym: "upper extremity long bone" EXACT [OBOL:automatic] synonym: "wing long bone" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] xref: EMAPA:35350 xref: MA:0000299 is_a: UBERON:0003606 ! limb long bone is_a: UBERON:0008962 ! forelimb bone [Term] id: UBERON:0003608 name: hindlimb long bone namespace: uberon def: "A long bone that is part of a hindlimb [Automatically generated definition]." [OBOL:automatic] synonym: "hind limb long bone" EXACT [OBOL:automatic] synonym: "inferior member long bone" EXACT [OBOL:automatic] synonym: "long bone of hind limb" EXACT [OBOL:automatic] synonym: "long bone of hindlimb" EXACT [OBOL:automatic] synonym: "long bone of inferior member" EXACT [OBOL:automatic] synonym: "long bone of lower extremity" EXACT [OBOL:automatic] synonym: "lower extremity long bone" EXACT [OBOL:automatic] xref: EMAPA:35403 xref: MA:0000300 is_a: UBERON:0003464 ! hindlimb bone is_a: UBERON:0003606 ! limb long bone [Term] id: UBERON:0003620 name: manual digit 1 phalanx namespace: uberon def: "A phalanx that is part of a hand digit 1 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "fore limb digit 1 phalanx" EXACT [OBOL:accepted] synonym: "hand digit 1 phalanx" EXACT [MA:0001389] synonym: "hand digit 1 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit I phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of hand digit 1" EXACT [OBOL:automatic] synonym: "phalanx of thumb" EXACT [OBOL:automatic] synonym: "thumb phalanx" EXACT [OBOL:automatic] xref: EMAPA:19113 xref: FMA:35477 xref: MA:0001389 xref: NCIT:C52777 xref: SCTID:181975002 xref: UMLS:C1711344 {source="ncithesaurus:Hand_Digit_1_Phalanx"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0015025 ! manual digit 1 phalanx endochondral element relationship: part_of UBERON:5101463 ! manual digit 1 digitopodial skeleton [Term] id: UBERON:0003636 name: manual digit 2 phalanx namespace: uberon def: "A phalanx that is part of a hand digit 2 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "2 nd digit of hand digit long bone" EXACT [OBOL:automatic] synonym: "2 nd digit of hand long bone of digit" EXACT [OBOL:automatic] synonym: "2 nd digit of hand phalanx" EXACT [OBOL:automatic] synonym: "2 nd finger digit long bone" EXACT [OBOL:automatic] synonym: "2 nd finger long bone of digit" EXACT [OBOL:automatic] synonym: "2 nd finger phalanx" EXACT [OBOL:automatic] synonym: "digit long bone of 2 nd digit of hand" EXACT [OBOL:automatic] synonym: "digit long bone of 2 nd finger" EXACT [OBOL:automatic] synonym: "digit long bone of hand digit 2" EXACT [OBOL:automatic] synonym: "digit long bone of second finger" EXACT [OBOL:automatic] synonym: "fore limb digit 2 phalanx" EXACT [OBOL:accepted] synonym: "hand digit 2 digit long bone" EXACT [OBOL:automatic] synonym: "hand digit 2 long bone of digit" EXACT [OBOL:automatic] synonym: "hand digit 2 phalanx" EXACT [MA:0001390] synonym: "hand digit 2 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "index finger phalanx" EXACT [FMA:35480] synonym: "long bone of digit of 2 nd digit of hand" EXACT [OBOL:automatic] synonym: "long bone of digit of 2 nd finger" EXACT [OBOL:automatic] synonym: "long bone of digit of hand digit 2" EXACT [OBOL:automatic] synonym: "long bone of digit of second finger" EXACT [OBOL:automatic] synonym: "manual digit II phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of 2 nd digit of hand" EXACT [OBOL:automatic] synonym: "phalanx of 2 nd finger" EXACT [OBOL:automatic] synonym: "phalanx of hand digit 2" EXACT [OBOL:automatic] synonym: "phalanx of index finger" EXACT [FMA:35480] synonym: "phalanx of manual digit 2" EXACT [OBOL:accepted] synonym: "phalanx of second finger" EXACT [OBOL:automatic] synonym: "second finger digit long bone" EXACT [OBOL:automatic] synonym: "second finger long bone of digit" EXACT [OBOL:automatic] synonym: "second finger phalanx" EXACT [OBOL:automatic] xref: EMAPA:19115 xref: FMA:35480 xref: MA:0001390 xref: NCIT:C52776 xref: SCTID:361783009 xref: UMLS:C1708312 {source="ncithesaurus:Hand_Digit_2_Phalanx"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0015026 ! manual digit 2 phalanx endochondral element relationship: part_of UBERON:5103622 ! manual digit 2 digitopodial skeleton [Term] id: UBERON:0003637 name: manual digit 3 phalanx namespace: uberon def: "A phalanx that is part of a hand digit 3 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "3 rd digit of hand digit long bone" EXACT [OBOL:automatic] synonym: "3 rd digit of hand long bone of digit" EXACT [OBOL:automatic] synonym: "3 rd digit of hand phalanx" EXACT [OBOL:automatic] synonym: "3 rd finger digit long bone" EXACT [OBOL:automatic] synonym: "3 rd finger long bone of digit" EXACT [OBOL:automatic] synonym: "3 rd finger phalanx" EXACT [OBOL:automatic] synonym: "digit long bone of 3 rd digit of hand" EXACT [OBOL:automatic] synonym: "digit long bone of 3 rd finger" EXACT [OBOL:automatic] synonym: "digit long bone of hand digit 3" EXACT [OBOL:automatic] synonym: "digit long bone of third finger" EXACT [OBOL:automatic] synonym: "fore limb digit 3 phalanx" EXACT [OBOL:accepted] synonym: "hand digit 3 digit long bone" EXACT [OBOL:automatic] synonym: "hand digit 3 long bone of digit" EXACT [OBOL:automatic] synonym: "hand digit 3 phalanx" EXACT [MA:0001391] synonym: "hand digit 3 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "long bone of digit of 3 rd digit of hand" EXACT [OBOL:automatic] synonym: "long bone of digit of 3 rd finger" EXACT [OBOL:automatic] synonym: "long bone of digit of hand digit 3" EXACT [OBOL:automatic] synonym: "long bone of digit of third finger" EXACT [OBOL:automatic] synonym: "manual digit III phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle finger phalanx" EXACT [FMA:35483] synonym: "phalanx of 3 rd digit of hand" EXACT [OBOL:automatic] synonym: "phalanx of 3 rd finger" EXACT [OBOL:automatic] synonym: "phalanx of hand digit 3" EXACT [OBOL:automatic] synonym: "phalanx of middle finger" EXACT [FMA:35483] synonym: "phalanx of third finger" EXACT [OBOL:automatic] synonym: "third finger digit long bone" EXACT [OBOL:automatic] synonym: "third finger long bone of digit" EXACT [OBOL:automatic] synonym: "third finger phalanx" EXACT [OBOL:automatic] xref: EMAPA:19117 xref: FMA:35483 xref: MA:0001391 xref: NCIT:C52775 xref: SCTID:361785002 xref: UMLS:C1708314 {source="ncithesaurus:Hand_Digit_3_Phalanx"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0015027 ! manual digit 3 phalanx endochondral element relationship: part_of UBERON:5103623 ! manual digit 3 digitopodial skeleton [Term] id: UBERON:0003638 name: manual digit 4 phalanx namespace: uberon def: "A phalanx that is part of a hand digit 4 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "4 th digit of hand digit long bone" EXACT [OBOL:automatic] synonym: "4 th digit of hand long bone of digit" EXACT [OBOL:automatic] synonym: "4 th digit of hand phalanx" EXACT [OBOL:automatic] synonym: "4 th finger digit long bone" EXACT [OBOL:automatic] synonym: "4 th finger long bone of digit" EXACT [OBOL:automatic] synonym: "4 th finger phalanx" EXACT [OBOL:automatic] synonym: "digit long bone of 4 th digit of hand" EXACT [OBOL:automatic] synonym: "digit long bone of 4 th finger" EXACT [OBOL:automatic] synonym: "digit long bone of fourth finger" EXACT [OBOL:automatic] synonym: "digit long bone of hand digit 4" EXACT [OBOL:automatic] synonym: "fore limb digit 4 phalanx" EXACT [OBOL:accepted] synonym: "fourth finger digit long bone" EXACT [OBOL:automatic] synonym: "fourth finger long bone of digit" EXACT [OBOL:automatic] synonym: "fourth finger phalanx" EXACT [OBOL:automatic] synonym: "hand digit 4 digit long bone" EXACT [OBOL:automatic] synonym: "hand digit 4 long bone of digit" EXACT [OBOL:automatic] synonym: "hand digit 4 phalanx" EXACT [MA:0001392] synonym: "hand digit 4 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "long bone of digit of 4 th digit of hand" EXACT [OBOL:automatic] synonym: "long bone of digit of 4 th finger" EXACT [OBOL:automatic] synonym: "long bone of digit of fourth finger" EXACT [OBOL:automatic] synonym: "long bone of digit of hand digit 4" EXACT [OBOL:automatic] synonym: "manual digit IV phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of 4 th digit of hand" EXACT [OBOL:automatic] synonym: "phalanx of 4 th finger" EXACT [OBOL:automatic] synonym: "phalanx of fourth finger" EXACT [OBOL:automatic] synonym: "phalanx of hand digit 4" EXACT [OBOL:automatic] synonym: "phalanx of ring finger" EXACT [FMA:35486] synonym: "ring finger phalanx" EXACT [FMA:35486] xref: EMAPA:19119 xref: FMA:35486 xref: MA:0001392 xref: NCIT:C52774 xref: SCTID:361787005 xref: UMLS:C1708316 {source="ncithesaurus:Hand_Digit_4_Phalanx"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0015028 ! manual digit 4 phalanx endochondral element relationship: part_of UBERON:5103624 ! manual digit 4 digitopodial skeleton [Term] id: UBERON:0003639 name: manual digit 5 phalanx namespace: uberon def: "A phalanx that is part of a hand digit 5 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "5 th digit of hand digit long bone" EXACT [OBOL:automatic] synonym: "5 th digit of hand long bone of digit" EXACT [OBOL:automatic] synonym: "5 th digit of hand phalanx" EXACT [OBOL:automatic] synonym: "5 th finger digit long bone" EXACT [OBOL:automatic] synonym: "5 th finger long bone of digit" EXACT [OBOL:automatic] synonym: "5 th finger phalanx" EXACT [OBOL:automatic] synonym: "digit long bone of 5 th digit of hand" EXACT [OBOL:automatic] synonym: "digit long bone of 5 th finger" EXACT [OBOL:automatic] synonym: "digit long bone of fifth finger" EXACT [OBOL:automatic] synonym: "digit long bone of hand digit 5" EXACT [OBOL:automatic] synonym: "fifth finger digit long bone" EXACT [OBOL:automatic] synonym: "fifth finger long bone of digit" EXACT [OBOL:automatic] synonym: "fifth finger phalanx" EXACT [OBOL:automatic] synonym: "fore limb digit 5 phalanx" EXACT [OBOL:accepted] synonym: "hand digit 5 digit long bone" EXACT [OBOL:automatic] synonym: "hand digit 5 long bone of digit" EXACT [OBOL:automatic] synonym: "hand digit 5 phalanx" EXACT [MA:0001393] synonym: "hand digit 5 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "little finger phalanx" EXACT [FMA:35489] synonym: "long bone of digit of 5 th digit of hand" EXACT [OBOL:automatic] synonym: "long bone of digit of 5 th finger" EXACT [OBOL:automatic] synonym: "long bone of digit of fifth finger" EXACT [OBOL:automatic] synonym: "long bone of digit of hand digit 5" EXACT [OBOL:automatic] synonym: "manual digit V phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of 5 th digit of hand" EXACT [OBOL:automatic] synonym: "phalanx of 5 th finger" EXACT [OBOL:automatic] synonym: "phalanx of 5th finger" EXACT [] synonym: "phalanx of fifth digit of hand" EXACT [FMA:35489] synonym: "phalanx of fifth finger" EXACT [OBOL:automatic] synonym: "phalanx of hand digit 5" EXACT [OBOL:automatic] synonym: "phalanx of little finger" EXACT [FMA:35489] synonym: "phalanx of manual digitus minimus" EXACT [OBOL:automatic] xref: EMAPA:19121 xref: FMA:35489 xref: MA:0001393 xref: NCIT:C52773 xref: SCTID:361789008 xref: UMLS:C1708317 {source="ncithesaurus:Hand_Digit_5_Phalanx"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0015029 ! manual digit 5 phalanx endochondral element relationship: part_of UBERON:5103625 ! manual digit 5 digitopodial skeleton [Term] id: UBERON:0003640 name: pedal digit 1 phalanx namespace: uberon def: "A phalanx that is part of a foot digit 1 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "big toe phalanx" EXACT [FMA:32884] synonym: "digit long bone of foot digit 1" EXACT [OBOL:automatic] synonym: "digit long bone of hallux" EXACT [OBOL:automatic] synonym: "foot digit 1 digit long bone" EXACT [OBOL:automatic] synonym: "foot digit 1 long bone of digit" EXACT [OBOL:automatic] synonym: "foot digit 1 phalanx" EXACT [MA:0001381] synonym: "foot digit 1 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hallux digit long bone" EXACT [OBOL:automatic] synonym: "hallux long bone of digit" EXACT [OBOL:automatic] synonym: "hallux phalanx" EXACT [OBOL:automatic] synonym: "hind limb digit 1 phalanx" EXACT [OBOL:accepted] synonym: "long bone of digit of foot digit 1" EXACT [OBOL:automatic] synonym: "long bone of digit of hallux" EXACT [OBOL:automatic] synonym: "pedal digit I phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of big toe" EXACT [FMA:32884] synonym: "phalanx of first digit of foot" EXACT [FMA:32884] synonym: "phalanx of first toe" RELATED [FMA:32884] synonym: "phalanx of foot digit 1" EXACT [OBOL:automatic] synonym: "phalanx of great toe" EXACT [FMA:32884] synonym: "phalanx of hallux" EXACT [OBOL:automatic] xref: EMAPA:19124 xref: FMA:32884 xref: MA:0001381 xref: NCIT:C52778 xref: SCTID:361798006 xref: UMLS:C1708080 {source="ncithesaurus:Foot_Digit_1_Phalanx"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0015031 ! pedal digit 1 phalanx endochondral element relationship: part_of UBERON:5103631 ! pedal digit 1 digitopodial skeleton [Term] id: UBERON:0003641 name: pedal digit 2 phalanx namespace: uberon def: "A phalanx that is part of a foot digit 2 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "digit long bone of foot digit 2" EXACT [OBOL:automatic] synonym: "foot digit 2 digit long bone" EXACT [OBOL:automatic] synonym: "foot digit 2 long bone of digit" EXACT [OBOL:automatic] synonym: "foot digit 2 phalanx" EXACT [MA:0001382] synonym: "foot digit 2 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 2 phalanx" EXACT [OBOL:accepted] synonym: "long bone of digit of foot digit 2" EXACT [OBOL:automatic] synonym: "pedal digit II phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of foot digit 2" EXACT [OBOL:automatic] synonym: "phalanx of second toe" EXACT [FMA:32899] synonym: "second toe phalanx" EXACT [FMA:32899] xref: EMAPA:19126 xref: FMA:32899 xref: MA:0001382 xref: NCIT:C52779 xref: SCTID:361800004 xref: UMLS:C1708082 {source="ncithesaurus:Foot_Digit_2_Phalanx"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0015032 ! pedal digit 2 phalanx endochondral element relationship: part_of UBERON:5103632 ! pedal digit 2 digitopodial skeleton [Term] id: UBERON:0003642 name: pedal digit 3 phalanx namespace: uberon def: "A phalanx that is part of a foot digit 3 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "digit long bone of foot digit 3" EXACT [OBOL:automatic] synonym: "foot digit 3 digit long bone" EXACT [OBOL:automatic] synonym: "foot digit 3 long bone of digit" EXACT [OBOL:automatic] synonym: "foot digit 3 phalanx" EXACT [MA:0001383] synonym: "foot digit 3 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 3 phalanx" EXACT [OBOL:accepted] synonym: "long bone of digit of foot digit 3" EXACT [OBOL:automatic] synonym: "pedal digit III phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of foot digit 3" EXACT [OBOL:automatic] synonym: "phalanx of third toe" EXACT [FMA:32900] synonym: "third toe phalanx" EXACT [FMA:32900] xref: EMAPA:19128 xref: FMA:32900 xref: MA:0001383 xref: NCIT:C52780 xref: SCTID:361802007 xref: UMLS:C1708084 {source="ncithesaurus:Foot_Digit_3_Phalanx"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0015033 ! pedal digit 3 phalanx endochondral element relationship: part_of UBERON:5103633 ! pedal digit 3 digitopodial skeleton [Term] id: UBERON:0003645 name: metacarpal bone of digit 1 namespace: uberon def: "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 1." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "finger 1 metacarpus" EXACT [] synonym: "first digit of hand metacarpal" EXACT [OBOL:automatic] synonym: "first digit of hand metacarpal bone" EXACT [OBOL:automatic] synonym: "first metacarpal bone" EXACT [FMA:23899] synonym: "forelimb digit 1 metacarpus" RELATED [EMAPA:19112] synonym: "hand digit 1 metacarpal" EXACT [OBOL:automatic] synonym: "hand digit 1 metacarpal bone" EXACT [OBOL:automatic] synonym: "manual digit 1 metacarpus" EXACT [] synonym: "metacarpal 1" EXACT [] synonym: "metacarpal bone digit 1" EXACT [MA:0001364] synonym: "metacarpal bone of digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal bone of first digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal bone of hand digit 1" EXACT [OBOL:automatic] synonym: "metacarpal bone of thumb" EXACT [OBOL:automatic] synonym: "metacarpal I" EXACT [FMA:23899] synonym: "metacarpal of first digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal of hand digit 1" EXACT [OBOL:automatic] synonym: "metacarpal of thumb" EXACT [OBOL:automatic] synonym: "thumb metacarpal" EXACT [OBOL:automatic] synonym: "thumb metacarpal bone" EXACT [OBOL:automatic] xref: AAO:0010616 xref: EMAPA:19112 xref: FMA:23899 xref: MA:0001364 xref: NCIT:C52796 xref: SCTID:181973009 xref: UMLS:C1708987 {source="ncithesaurus:Metacarpal_Bone_Digit_1"} is_a: UBERON:0002374 ! metacarpal bone is_a: UBERON:0013581 ! metapodium bone 1 is_a: UBERON:0015043 ! manual digit 1 metacarpus endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "The first metacarpal bone or the metacarpal bone of the thumb is the first bone of the thumb. It is connected to the trapezium of the carpus at the first carpometacarpal joint and to the proximal thumb phalanx at the first metacarpophalangeal joint[Wikipedia:First_metacarpal_bone]." xsd:string {source="Wikipedia:First_metacarpal_bone"} property_value: UBPROP:0000104 "1" xsd:nonNegativeInteger [Term] id: UBERON:0003646 name: metacarpal bone of digit 2 namespace: uberon def: "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 2." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2 nd digit of hand metacarpal" EXACT [OBOL:automatic] synonym: "2 nd digit of hand metacarpal bone" EXACT [OBOL:automatic] synonym: "2 nd finger metacarpal" EXACT [OBOL:automatic] synonym: "2 nd finger metacarpal bone" EXACT [OBOL:automatic] synonym: "finger 2 metacarpus" EXACT [] synonym: "forelimb digit 2 metacarpus" RELATED [EMAPA:19114] synonym: "hand digit 2 metacarpal" EXACT [OBOL:automatic] synonym: "hand digit 2 metacarpal bone" EXACT [OBOL:automatic] synonym: "manual digit 2 metacarpus" EXACT [] synonym: "metacarpal 2" EXACT [] synonym: "metacarpal bone digit 2" EXACT [MA:0001365] synonym: "metacarpal bone of 2 nd digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal bone of 2 nd finger" EXACT [OBOL:automatic] synonym: "metacarpal bone of digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal bone of hand digit 2" EXACT [OBOL:automatic] synonym: "metacarpal bone of second finger" EXACT [OBOL:automatic] synonym: "metacarpal II" EXACT [FMA:23900] synonym: "metacarpal of 2 nd digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal of 2 nd finger" EXACT [OBOL:automatic] synonym: "metacarpal of hand digit 2" EXACT [OBOL:automatic] synonym: "metacarpal of second finger" EXACT [OBOL:automatic] synonym: "second finger metacarpal" EXACT [OBOL:automatic] synonym: "second finger metacarpal bone" EXACT [OBOL:automatic] synonym: "second metacarpal bone" EXACT [FMA:23900] xref: AAO:0000853 xref: EMAPA:19114 xref: FMA:23900 xref: MA:0001365 xref: NCIT:C52795 xref: SCTID:263399007 xref: UMLS:C1708988 {source="ncithesaurus:Metacarpal_Bone_Digit_2"} is_a: UBERON:0002374 ! metacarpal bone is_a: UBERON:0013582 ! metapodium bone 2 is_a: UBERON:0015044 ! manual digit 2 metacarpus endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with the prepollex and carpal 2(1) or carpal 2+3(1+2) proximally and with the proximal phalanx of digit II(I) distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000853", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000104 "2" xsd:nonNegativeInteger [Term] id: UBERON:0003647 name: metacarpal bone of digit 3 namespace: uberon def: "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 3[Automatically generated definition]." [OBOL:automatic, Wikipedia:Third_metacarpal_bone] subset: human_reference_atlas subset: pheno_slim synonym: "3 rd digit of hand metacarpal" EXACT [OBOL:automatic] synonym: "3 rd digit of hand metacarpal bone" EXACT [OBOL:automatic] synonym: "3 rd finger metacarpal" EXACT [OBOL:automatic] synonym: "3 rd finger metacarpal bone" EXACT [OBOL:automatic] synonym: "finger 3 metacarpus" EXACT [] synonym: "forelimb cannon bone" NARROW SENSU [https://orcid.org/0000-0002-6601-2165] synonym: "forelimb digit 3 metacarpus" RELATED [EMAPA:19116] synonym: "hand digit 3 metacarpal" EXACT [OBOL:automatic] synonym: "hand digit 3 metacarpal bone" EXACT [OBOL:automatic] synonym: "manual digit 3 metacarpus" EXACT [] synonym: "metacarpal 3" EXACT [] synonym: "metacarpal bone digit 3" EXACT [MA:0001366] synonym: "metacarpal bone of 3 rd digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal bone of 3 rd finger" EXACT [OBOL:automatic] synonym: "metacarpal bone of digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal bone of hand digit 3" EXACT [OBOL:automatic] synonym: "metacarpal bone of third finger" EXACT [OBOL:automatic] synonym: "metacarpal III" EXACT [FMA:23901] synonym: "metacarpal of 3 rd digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal of 3 rd finger" EXACT [OBOL:automatic] synonym: "metacarpal of hand digit 3" EXACT [OBOL:automatic] synonym: "metacarpal of third finger" EXACT [OBOL:automatic] synonym: "third finger metacarpal" EXACT [OBOL:automatic] synonym: "third finger metacarpal bone" EXACT [OBOL:automatic] synonym: "third metacarpal bone" EXACT [FMA:23901] xref: AAO:0000854 xref: EMAPA:19116 xref: FMA:23901 xref: MA:0001366 xref: NCIT:C52794 xref: SCTID:263400000 xref: UMLS:C1708989 {source="ncithesaurus:Metacarpal_Bone_Digit_3"} xref: Wikipedia:Third_metacarpal_bone is_a: UBERON:0002374 ! metacarpal bone is_a: UBERON:0013583 ! metapodium bone 3 is_a: UBERON:0015045 ! manual digit 3 metacarpus endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with carpal 3(2) proximally and with the proximal phalanx of digit III(II) distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000854", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The third metacarpal bone (metacarpal bone of the middle finger) is a little smaller than the second. The dorsal aspect of its base presents on its radial side a pyramidal eminence, the styloid process, which extends upward behind the capitate; immediately distal to this is a rough surface for the attachment of the extensor carpi radialis brevis muscle. The carpal articular facet is concave behind, flat in front, and articulates with the capitate. On the radial side is a smooth, concave facet for articulation with the second metacarpal, and on the ulnar side two small oval facets for the fourth metacarpal[Wikipedia:Third_metacarpal_bone]." xsd:string {source="Wikipedia:Third_metacarpal_bone"} property_value: UBPROP:0000104 "3" xsd:nonNegativeInteger [Term] id: UBERON:0003648 name: metacarpal bone of digit 4 namespace: uberon def: "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 4." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4 th digit of hand metacarpal" EXACT [OBOL:automatic] synonym: "4 th digit of hand metacarpal bone" EXACT [OBOL:automatic] synonym: "4 th finger metacarpal" EXACT [OBOL:automatic] synonym: "4 th finger metacarpal bone" EXACT [OBOL:automatic] synonym: "finger 4 metacarpus" EXACT [] synonym: "forelimb digit 4 metacarpus" RELATED [EMAPA:19118] synonym: "fourth finger metacarpal" EXACT [OBOL:automatic] synonym: "fourth finger metacarpal bone" EXACT [OBOL:automatic] synonym: "fourth metacarpal bone" EXACT [FMA:23902] synonym: "hand digit 4 metacarpal" EXACT [OBOL:automatic] synonym: "hand digit 4 metacarpal bone" EXACT [OBOL:automatic] synonym: "manual digit 4 metacarpus" EXACT [] synonym: "metacarpal 4" EXACT [] synonym: "metacarpal bone digit 4" EXACT [MA:0001367] synonym: "metacarpal bone of 4 th digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal bone of 4 th finger" EXACT [OBOL:automatic] synonym: "metacarpal bone of digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal bone of fourth finger" EXACT [OBOL:automatic] synonym: "metacarpal bone of hand digit 4" EXACT [OBOL:automatic] synonym: "metacarpal IV" EXACT [FMA:23902] synonym: "metacarpal of 4 th digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal of 4 th finger" EXACT [OBOL:automatic] synonym: "metacarpal of fourth finger" EXACT [OBOL:automatic] synonym: "metacarpal of hand digit 4" EXACT [OBOL:automatic] xref: AAO:0010615 xref: EMAPA:19118 xref: FMA:23902 xref: MA:0001367 xref: NCIT:C52793 xref: SCTID:263401001 xref: UMLS:C1708990 {source="ncithesaurus:Metacarpal_Bone_Digit_4"} is_a: UBERON:0002374 ! metacarpal bone is_a: UBERON:0013584 ! metapodium bone 4 is_a: UBERON:0015046 ! manual digit 4 metacarpus endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "The fourth metacarpal bone (metacarpal bone of the ring finger) is shorter and smaller than the third. The base is small and quadrilateral; its superior surface presents two facets, a large one medially for articulation with the hamate, and a small one laterally for the capitate. On the radial side are two oval facets, for articulation with the third metacarpal; and on the ulnar side a single concave facet, for the fifth metacarpal[Wikipedia:Fourth_metacarpal_bone]." xsd:string {source="Wikipedia:Fourth_metacarpal_bone"} property_value: UBPROP:0000104 "4" xsd:nonNegativeInteger [Term] id: UBERON:0003649 name: metacarpal bone of digit 5 namespace: uberon def: "A metacarpal bone that distally_connected_to a proximal phalanx of manual digit 5." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5 th digit of hand metacarpal" EXACT [OBOL:automatic] synonym: "5 th digit of hand metacarpal bone" EXACT [OBOL:automatic] synonym: "5 th finger metacarpal" EXACT [OBOL:automatic] synonym: "5 th finger metacarpal bone" EXACT [OBOL:automatic] synonym: "fifth finger metacarpal" EXACT [OBOL:automatic] synonym: "fifth finger metacarpal bone" EXACT [OBOL:automatic] synonym: "fifth metacarpal bone" EXACT [FMA:23903] synonym: "finger 5 metacarpus" EXACT [] synonym: "forelimb digit 5 metacarpus" RELATED [EMAPA:19120] synonym: "hand digit 5 metacarpal" EXACT [OBOL:automatic] synonym: "hand digit 5 metacarpal bone" EXACT [OBOL:automatic] synonym: "manual digit 5 metacarpus" EXACT [] synonym: "metacarpal 5" EXACT [] synonym: "metacarpal bone digit 5" EXACT [MA:0001368] synonym: "metacarpal bone of 5 th digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal bone of 5 th finger" EXACT [OBOL:automatic] synonym: "metacarpal bone of digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal bone of fifth finger" EXACT [OBOL:automatic] synonym: "metacarpal bone of hand digit 5" EXACT [OBOL:automatic] synonym: "metacarpal of 5 th digit of hand" EXACT [OBOL:automatic] synonym: "metacarpal of 5 th finger" EXACT [OBOL:automatic] synonym: "metacarpal of fifth finger" EXACT [OBOL:automatic] synonym: "metacarpal of hand digit 5" EXACT [OBOL:automatic] synonym: "metacarpal V" EXACT [] xref: AAO:0000855 xref: EMAPA:19120 xref: FMA:23903 xref: MA:0001368 xref: NCIT:C52792 xref: SCTID:263402008 xref: UMLS:C1711224 {source="ncithesaurus:Metacarpal_Bone_Digit_5"} is_a: UBERON:0002374 ! metacarpal bone is_a: UBERON:0013585 ! metapodium bone 5 is_a: UBERON:0015047 ! manual digit 5 metacarpus endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell shaped bones of endochondral origin with cartilaginous epiphyses that articulates with carpal 5(4) proximally and with the proximal phalanx of digit V(IV) distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000855", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The fifth metacarpal bone (metacarpal bone of the little finger or pinky finger) is the most lateral metacarpal[Wikipedia:Fifth_metacarpal_bone]." xsd:string {source="Wikipedia:Fifth_metacarpal_bone"} property_value: UBPROP:0000012 "FMA also has FMA:36782 ! Bone of fifth metacarpal bone" xsd:string {external_ontology="FMA"} property_value: UBPROP:0000104 "5" xsd:nonNegativeInteger [Term] id: UBERON:0003650 name: metatarsal bone of digit 1 namespace: uberon def: "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 1." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "first metatarsal bone" EXACT [FMA:24502] synonym: "foot digit 1 metatarsal bone" EXACT [OBOL:automatic] synonym: "hallux metatarsal bone" EXACT [OBOL:automatic] synonym: "hindlimb digit 1 metatarsus" RELATED [EMAPA:19123] synonym: "metatarsal 1" EXACT [] synonym: "metatarsal bone digit 1" EXACT [MA:0001369] synonym: "metatarsal bone of digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metatarsal bone of foot digit 1" EXACT [OBOL:automatic] synonym: "metatarsal bone of hallux" EXACT [OBOL:automatic] synonym: "metatarsal I" EXACT [AAO:0000925] synonym: "toe 1 metatarsal" EXACT [] synonym: "toe 1 metatarsus" EXACT [] xref: AAO:0000925 xref: EMAPA:19123 xref: FMA:24502 xref: MA:0001369 xref: NCIT:C52791 xref: SCTID:182121005 xref: UMLS:C1708999 {source="ncithesaurus:Metatarsal_Bone_Digit_1"} is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:0013581 ! metapodium bone 1 is_a: UBERON:0015037 ! pedal digit 1 metatarsal endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with the prepollex and tarsal 1 proximally and with the proximal phalanx of digit I distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000925", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The first metatarsal bone is the bone in the body of the foot just behind the big toe. It is remarkable for its great thickness, and is the shortest of the metatarsal bones. The body is strong, and of well-marked prismoid form. The base presents, as a rule, no articular facets on its sides, but occasionally on the lateral side there is an oval facet, by which it articulates with the second metatarsal. Its proximal articular surface is of large size and kidney-shaped; its circumference is grooved, for the tarsometatarsal ligaments, and medially gives insertion to part of the tendon of the Tibialis anterior; its plantar angle presents a rough oval prominence for the insertion of the tendon of the Peronæus longus. The head is large; on its plantar surface are two grooved facets, on which glide sesamoid bones; the facets are separated by a smooth elevation[Wikipedia:First_metatarsal_bone]." xsd:string {source="Wikipedia:First_metatarsal_bone"} property_value: UBPROP:0000104 "1" xsd:nonNegativeInteger [Term] id: UBERON:0003651 name: metatarsal bone of digit 2 namespace: uberon def: "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 2." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "foot digit 2 metatarsal bone" EXACT [OBOL:automatic] synonym: "hindlimb digit 2 metatarsus" RELATED [EMAPA:19125] synonym: "metatarsal 2" EXACT [] synonym: "metatarsal bone digit 2" EXACT [MA:0001370] synonym: "metatarsal bone of digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metatarsal bone of foot digit 2" EXACT [OBOL:automatic] synonym: "metatarsal II" EXACT [AAO:0000926] synonym: "second metatarsal bone" EXACT [FMA:24503] synonym: "toe 2 metatarsal" EXACT [] synonym: "toe 2 metatarsus" EXACT [] xref: AAO:0000926 xref: EMAPA:19125 xref: FMA:24503 xref: MA:0001370 xref: NCIT:C52790 xref: SCTID:182128004 xref: UMLS:C1709000 {source="ncithesaurus:Metatarsal_Bone_Digit_2"} is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:0013582 ! metapodium bone 2 is_a: UBERON:0015038 ! pedal digit 2 metatarsal endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 2 proximally and with the proximal phalanx of digit II distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000926", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000104 "2" xsd:nonNegativeInteger [Term] id: UBERON:0003652 name: metatarsal bone of digit 3 namespace: uberon def: "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 3[Automatically generated definition]." [OBOL:automatic, Wikipedia:Third_metatarsal_bone] subset: human_reference_atlas subset: pheno_slim synonym: "foot digit 3 metatarsal bone" EXACT [OBOL:automatic] synonym: "hindlimb cannon bone" NARROW SENSU [https://orcid.org/0000-0002-6601-2165] synonym: "hindlimb digit 3 metatarsal" RELATED [EMAPA:19127] synonym: "metatarsal 3" EXACT [] synonym: "metatarsal bone digit 3" EXACT [MA:0001371] synonym: "metatarsal bone of digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metatarsal bone of foot digit 3" EXACT [OBOL:automatic] synonym: "metatarsal III" EXACT [AAO:0000927] synonym: "third metatarsal bone" EXACT [FMA:24504] synonym: "toe 3 metatarsal" EXACT [] synonym: "toe 3 metatarsus" EXACT [] xref: AAO:0000927 xref: EMAPA:19127 xref: FMA:24504 xref: MA:0001371 xref: NCIT:C52789 xref: SCTID:182134006 xref: UMLS:C1709001 {source="ncithesaurus:Metatarsal_Bone_Digit_3"} xref: Wikipedia:Third_metatarsal_bone is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:0013583 ! metapodium bone 3 is_a: UBERON:0015039 ! pedal digit 3 metatarsal endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 3 proximally and with the proximal phalanx of digit III distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000927", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The third metatarsal bone articulates proximally, by means of a triangular smooth surface, with the third cuneiform; medially, by two facets, with the second metatarsal; and laterally, by a single facet, with the fourth metatarsal. This last facet is situated at the dorsal angle of the base[Wikipedia:Third_metatarsal_bone]." xsd:string {source="Wikipedia:Third_metatarsal_bone"} property_value: UBPROP:0000104 "3" xsd:nonNegativeInteger [Term] id: UBERON:0003653 name: metatarsal bone of digit 4 namespace: uberon def: "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 4." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "foot digit 4 metatarsal bone" EXACT [OBOL:automatic] synonym: "fourth metatarsal bone" EXACT [FMA:24505] synonym: "hindlimb digit 4 metatarsus" RELATED [EMAPA:19129] synonym: "metatarsal 4" EXACT [] synonym: "metatarsal bone digit 4" EXACT [MA:0001372] synonym: "metatarsal bone of digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metatarsal bone of foot digit 4" EXACT [OBOL:automatic] synonym: "metatarsal IV" EXACT [AAO:0000928] synonym: "toe 4 metatarsal" EXACT [] synonym: "toe 4 metatarsus" EXACT [] xref: AAO:0000928 xref: EMAPA:19129 xref: FMA:24505 xref: MA:0001372 xref: NCIT:C52788 xref: SCTID:182139001 xref: UMLS:C1709002 {source="ncithesaurus:Metatarsal_Bone_Digit_4"} is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:0013584 ! metapodium bone 4 is_a: UBERON:0015040 ! pedal digit 4 metatarsal endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 4 or the distal head of the tibiale-fibulare proximally and with the proximal phalanx of digit IV distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000928", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The fourth metatarsal bone is smaller in size than the third; its base presents an oblique quadrilateral surface for articulation with the cuboid; a smooth facet on the medial side, divided by a ridge into an anterior portion for articulation with the third metatarsal, and a posterior portion for articulation with the third cuneiform; on the lateral side a single facet, for articulation with the fifth metatarsal[Wikipedia:Fourth_metatarsal_bone]." xsd:string {source="Wikipedia:Fourth_metatarsal_bone"} property_value: UBPROP:0000104 "4" xsd:nonNegativeInteger [Term] id: UBERON:0003654 name: metatarsal bone of digit 5 namespace: uberon def: "A metatarsal bone that distally_connected_to a proximal phalanx of pedal digit 5." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "fifth metatarsal bone" EXACT [FMA:24506] synonym: "foot digit 5 metatarsal bone" EXACT [OBOL:automatic] synonym: "hindlimb digit 5 metatarsus" RELATED [EMAPA:19131] synonym: "metatarsal 5" EXACT [] synonym: "metatarsal bone digit 5" EXACT [MA:0001373] synonym: "metatarsal bone of digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metatarsal bone of foot digit 5" EXACT [OBOL:automatic] synonym: "metatarsal V" EXACT [AAO:0000929] synonym: "toe 5 metatarsal" EXACT [] synonym: "toe 5 metatarsus" EXACT [] xref: AAO:0000929 xref: EMAPA:19131 xref: FMA:24506 xref: MA:0001373 xref: NCIT:C52787 xref: SCTID:182144008 xref: UMLS:C1709003 {source="ncithesaurus:Metatarsal_Bone_Digit_5"} is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:0013585 ! metapodium bone 5 is_a: UBERON:0015041 ! pedal digit 5 metatarsal endochondral element property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Dumb-bell-shaped bone of endochondral origin with cartilaginous epiphyses that articulates with tarsal 5 or the distal head of the tibiale-fibulare proximally and with the proximal phalanx of digit V distally.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000929", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "The fifth metatarsal bone is recognized by a rough eminence, the tuberosity, on the lateral side of its base. The base articulates behind, by a triangular surface cut obliquely in a transverse direction, with the cuboid; and medially, with the fourth metatarsal. On the medial part of its dorsal surface is inserted the tendon of the Peronæus tertius and on the dorsal surface of the tuberosity that of the Peronæus brevis. A strong band of the plantar aponeurosis connects the projecting part of the tuberosity with the lateral process of the tuberosity of the calcaneus. The plantar surface of the base is grooved for the tendon of the Abductor digiti quinti, and gives origin to the Flexor digiti quinti brevis. The base of the metatarsal is often injured and a particularly notorious fracture is the Jones fracture. When the tuberosity is broken, it is called a pseudo-Jones fracture or a dancer's fracture. This is a common fracture of the fifth metatarsal. Stress fractures are common in the fifth metatarsal among athletes[Wikipedia:Fifth_metatarsal_bone]." xsd:string {source="Wikipedia:Fifth_metatarsal_bone"} property_value: UBPROP:0000104 "5" xsd:nonNegativeInteger [Term] id: UBERON:0003656 name: mesopodium bone namespace: uberon def: "A bone that is part of a mesopodial skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "basipodium bone" EXACT [MA:th] synonym: "carpal/tarsal bone" EXACT [MA:0000295] synonym: "mesopod bone" EXACT [] synonym: "mesopodial bone" EXACT [] xref: EMAPA:36579 xref: MA:0000295 xref: Wikipedia:Carpus_and_tarsus_of_land_vertebrates is_a: UBERON:0011250 ! autopod bone relationship: part_of UBERON:0009878 {notes="https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"} ! mesopodial skeleton property_value: UBPROP:0000008 "The carpus (wrist) and tarsus (ankle) of land vertebrates primitively had three rows of carpal or tarsal bones. Often some of these have become lost or fused in evolution. Three proximals. In the hand humans has all three. In the foot the middle proximal appears in 5-15% of people as an os trigonum. Centrale or os centrale, on the medial side. In humans and our closest relatives the African apes (chimpanzees and gorillas) it fuses to the scaphoid where it forms the articulation with the trapezoid bone; occasionally it stays separate. In Man's foot it is the navicular. Some early land vertebrates had more than one (up to three) os centrale per hand or foot. Distals, one per finger / toe at the base of each metacarpal or metatarsal. In mammals the 4th and 5th fuse. In the horse the 1st is lost" xsd:string {source="Wikipedia:Carpus_and_tarsus_of_land_vertebrates"} [Term] id: UBERON:0003699 name: pubic symphysis namespace: uberon def: "The firm fibrocartilaginous joint in the median plane between the two opposing surfaces of the pubic bones, which are united by an interpubic disc of fibrocartilage as well as the superior and arcuate pubic ligaments." [MP:0009575, Wikipedia:Pubic_symphysis] subset: organ_slim subset: pheno_slim synonym: "interpubic articulation" RELATED [Wikipedia:Pubic_symphysis] synonym: "symphisis pubis" RELATED [Wikipedia:Pubic_symphysis] synonym: "symphysis pubica" RELATED OMO:0003011 [Wikipedia:Pubic_symphysis] synonym: "symphysis pubis" EXACT [FMA:16950] synonym: "symphysis pubis" RELATED OMO:0003011 [Wikipedia:Pubic_symphysis] xref: AAO:0000769 xref: EMAPA:37940 {source="MA:th"} xref: FMA:16950 xref: GAID:267 xref: MESH:D011631 xref: NCIT:C33425 xref: SCTID:182200001 xref: UMLS:C0034015 {source="ncithesaurus:Pubic_Symphisis"} xref: Wikipedia:Pubic_symphysis relationship: part_of UBERON:0001275 ! pubis property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/51/Gray321.png" xsd:anyURI property_value: UBPROP:0000001 "Medial attachment of the two halves of the pelvic girdle.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000769", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "In birds, the pubic symphysis is present only in the ostrich, and the two hip bones are usually widely separated, making it easier to lay large eggs - Romer, Alfred Sherwood; Parsons, Thomas S. (1977). The Vertebrate Body. Philadelphia, PA: Holt-Saunders International. pp. 188-192. ISBN 0-03-910284-X." xsd:string [Term] id: UBERON:0003821 name: metapodium bone namespace: uberon def: "A bone of the metapodial skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "metacarpal or metatarsal bone" EXACT [] synonym: "metacarpal/metatarsal" EXACT [] synonym: "metacarpal/metatarsal bone" EXACT [MA:0000301] synonym: "metapodi bone" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "metapodial bone" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "metapodium bone" EXACT [http://en.wiktionary.org/wiki/metapodial, https://orcid.org/0000-0002-6601-2165] xref: EMAPA:37284 {source="MA:th"} xref: MA:0000301 is_a: UBERON:0002495 {source="FMA-abduced"} ! long bone is_a: UBERON:0003606 ! limb long bone is_a: UBERON:0012357 ! digitopodium bone relationship: part_of UBERON:0010546 {notes="https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern"} ! metapodial skeleton [Term] id: UBERON:0003826 name: upper leg bone namespace: uberon def: "A bone that is part of a hindlimb stylopod [Automatically generated definition]." [https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376, OBOL:automatic] comment: May be merged into femur. See https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376 synonym: "femur" RELATED [https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376] xref: EMAPA:35893 xref: MA:0000682 is_a: UBERON:0005893 ! leg bone [Term] id: UBERON:0003862 name: pedal digit 4 phalanx namespace: uberon def: "A phalanx that is part of a foot digit 4 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "digit long bone of foot digit 4" EXACT [OBOL:automatic] synonym: "foot digit 4 digit long bone" EXACT [OBOL:automatic] synonym: "foot digit 4 long bone of digit" EXACT [OBOL:automatic] synonym: "foot digit 4 phalanx" EXACT [MA:0001384] synonym: "foot digit 4 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "fourth toe phalanx" EXACT [FMA:32901] synonym: "hind limb digit 4 phalanx" EXACT [OBOL:accepted] synonym: "long bone of digit of foot digit 4" EXACT [OBOL:automatic] synonym: "pedal digit IV phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of foot digit 4" EXACT [OBOL:automatic] synonym: "phalanx of fourth toe" EXACT [FMA:32901] xref: EMAPA:19130 xref: FMA:32901 xref: MA:0001384 xref: NCIT:C52781 xref: SCTID:361804008 xref: UMLS:C1708086 {source="ncithesaurus:Foot_Digit_4_Phalanx"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0015034 ! pedal digit 4 phalanx endochondral element relationship: part_of UBERON:5103634 ! pedal digit 4 digitopodial skeleton [Term] id: UBERON:0003863 name: pedal digit 5 phalanx namespace: uberon def: "A phalanx that is part of a foot digit 5 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "digit long bone of foot digit 5" EXACT [OBOL:automatic] synonym: "foot digit 5 digit long bone" EXACT [OBOL:automatic] synonym: "foot digit 5 long bone of digit" EXACT [OBOL:automatic] synonym: "foot digit 5 phalanx" EXACT [MA:0001385] synonym: "foot digit 5 phalanx" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 5 phalanx" EXACT [OBOL:accepted] synonym: "little toe phalanx" EXACT [FMA:32902] synonym: "long bone of digit of foot digit 5" EXACT [OBOL:automatic] synonym: "pedal digit V phalanx" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "phalanx of fifth digit of foot" EXACT [FMA:32902] synonym: "phalanx of fifth toe" EXACT [FMA:32902] synonym: "phalanx of foot digit 5" EXACT [OBOL:automatic] synonym: "phalanx of little toe" EXACT [FMA:32902] xref: EMAPA:19132 xref: FMA:32902 xref: MA:0001385 xref: NCIT:C52782 xref: SCTID:361806005 xref: UMLS:C1708088 {source="ncithesaurus:Foot_Digit_5_Phalanx"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0015035 ! pedal digit 5 phalanx endochondral element relationship: part_of UBERON:5103635 ! pedal digit 5 digitopodial skeleton [Term] id: UBERON:0003864 name: middle phalanx of manus namespace: uberon def: "A middle phalanx that is part of a finger [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "hand middle phalanx" EXACT [MA:0001394] synonym: "middle manual phalanx" EXACT [] synonym: "middle phalanx of finger" EXACT [FMA:75817] synonym: "middle phalanx of hand" EXACT [MA:0001394] synonym: "middle phalanx of manual digit" EXACT [] synonym: "phalanx media manus" EXACT OMO:0003011 [FMA:75817, FMA:TA] xref: EMAPA:37306 {source="MA:th"} xref: FMA:75817 xref: MA:0001394 xref: NCIT:C12863 xref: SCTID:113223004 xref: SCTID:371230003 xref: UMLS:C0223828 {source="ncithesaurus:Middle_Phalanx_of_the_Hand"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0004301 ! middle phalanx relationship: part_of UBERON:5102389 ! manual digit digitopodial skeleton [Term] id: UBERON:0003865 name: distal phalanx of manus namespace: uberon def: "A distal phalanx that is part of a finger [Automatically generated definition]." [OBOL:automatic] comment: This is typically proximally connected to the middle phalanx of manus, except in some cases such as the manual digit 1 (thumb) of many mammals such as humans, where it connects to the proximal phalanx. It always connects to some phalanx, by definition subset: pheno_slim synonym: "distal manual phalanx" EXACT [] synonym: "distal phalanx of finger" EXACT [FMA:75818] synonym: "distal phalanx of hand" EXACT [] synonym: "distal phalanx of manual digit" EXACT [] synonym: "hand distal phalanx" EXACT [MA:0001388] synonym: "phalanx distalis manus" EXACT OMO:0003011 [FMA:75818, FMA:TA] synonym: "terminal phalanx of hand" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "ungual phalanx of hand" EXACT [http://www.medilexicon.com/medicaldictionary.php?t=67679] xref: EMAPA:35393 xref: FMA:75818 xref: MA:0001388 xref: NCIT:C52784 xref: SCTID:182001007 xref: SCTID:361782004 xref: UMLS:C1269782 {source="ncithesaurus:Distal_Phalanx_of_Hand"} is_a: UBERON:0001436 ! phalanx of manus is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5102389 ! manual digit digitopodial skeleton [Term] id: UBERON:0003866 name: middle phalanx of pes namespace: uberon def: "A middle phalanx that is part of a toe [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "foot middle phalanx" EXACT [MA:0001386] synonym: "middle pedal phalanx" EXACT [] synonym: "middle phalanx of foot" EXACT [] synonym: "middle phalanx of toe" EXACT [FMA:75829] synonym: "phalanx media pedis" EXACT OMO:0003011 [FMA:75829, FMA:TA] xref: EMAPA:37311 {source="MA:th"} xref: FMA:75829 xref: MA:0001386 xref: SCTID:83207005 is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0004301 ! middle phalanx relationship: part_of UBERON:5101466 ! pedal digit digitopodial skeleton [Term] id: UBERON:0003867 name: distal phalanx of pes namespace: uberon def: "A distal phalanx that is part of a pedal digit [Automatically generated definition]." [OBOL:automatic] comment: This is typically proximally connected to the middle phalanx of pes, except in some cases such as the pedal digit 1 (big toe) in many mammals such as humans, where it connects to the proximal phalanx. It always connects to some phalanx, by definition subset: pheno_slim synonym: "distal pedal phalanx" EXACT [] synonym: "distal phalanx of foot" EXACT [] synonym: "distal phalanx of toe" EXACT [FMA:75830] synonym: "foot distal phalanx" EXACT [MA:0001380] synonym: "phalanx distalis pedis" EXACT OMO:0003011 [FMA:75830, FMA:TA] synonym: "terminal phalanx of foot" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "terminal phalanx of hindlimb" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "ungual phalanx of foot" EXACT [http://www.medilexicon.com/medicaldictionary.php?t=67679] synonym: "ungual phalanx of hindlimb" EXACT [http://www.medilexicon.com/medicaldictionary.php?t=67679] xref: EMAPA:37310 {source="MA:th"} xref: FMA:75830 xref: MA:0001380 xref: NCIT:C52783 xref: SCTID:361797001 xref: UMLS:C0224026 {source="ncithesaurus:Distal_Phalanx_of_Foot"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5101466 ! pedal digit digitopodial skeleton [Term] id: UBERON:0003868 name: proximal phalanx of pes namespace: uberon def: "A proximal phalanx that is part of a pedal digit [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "foot proximal phalanx" EXACT [MA:0001387] synonym: "phalanx proximalis pedis" EXACT OMO:0003011 [FMA:75828, FMA:TA] synonym: "proximal pedal phalanx" EXACT [] synonym: "proximal phalanx of foot" EXACT [] synonym: "proximal phalanx of foot digit" EXACT [] synonym: "proximal phalanx of hind digit" EXACT [] synonym: "proximal phalanx of pes" EXACT [] synonym: "proximal phalanx of toe" EXACT [FMA:75828] xref: EMAPA:37312 {source="MA:th"} xref: FMA:75828 xref: MA:0001387 xref: NCIT:C52785 xref: SCTID:85533000 xref: UMLS:C0224020 {source="ncithesaurus:Proximal_Phalanx_of_Foot"} is_a: UBERON:0001449 ! phalanx of pes is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5101466 ! pedal digit digitopodial skeleton [Term] id: UBERON:0003958 name: long bone epiphyseal ossification zone namespace: uberon def: "The layer of the epiphyseal plate where new bone matrix is deposited." [MP:0006399] subset: pheno_slim xref: EMAPA:37896 {source="MA:th"} is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0002495 ! long bone relationship: part_of UBERON:0002516 ! epiphyseal plate [Term] id: UBERON:0004098 name: tibial plateaux namespace: uberon def: "Missing definition for term UBERON:0004098. Please replace it using linked reference." [HP:0003832] subset: pheno_slim is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000979 ! tibia [Term] id: UBERON:0004109 name: cortex of humerus namespace: uberon def: "The outer or sperficial part of the humerus." [PHENOSCAPE:ad] subset: pheno_slim synonym: "compact bone of humerus" EXACT [FMA:31542] synonym: "cortex of the humerus" EXACT [] synonym: "humerus compact bone" EXACT [] synonym: "humerus cortical bone" EXACT [] xref: FMA:31542 is_a: UBERON:0005808 ! bone tissue of long bone relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0004248 name: pedal digit bone namespace: uberon def: "A bone that is part of a hindlimb digit. Typically phalanges but may include sesamoids." [https://orcid.org/0000-0002-6601-2165] synonym: "bone of digit of foot" EXACT [OBOL:automatic] synonym: "digit of foot bone" EXACT [OBOL:automatic] synonym: "digital bone of foot" EXACT [] synonym: "digital bone of pes" EXACT [] synonym: "digitus pedis bone" EXACT [OBOL:automatic] synonym: "digitus pedis bone organ" EXACT [OBOL:automatic] synonym: "foot digit bone" EXACT [MA:0000646] synonym: "foot digit bone" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "foot digit bone organ" EXACT [OBOL:automatic] synonym: "hind limb digit bone" EXACT [OBOL:accepted] synonym: "toe bone" EXACT [OBOL:automatic] synonym: "toe bone organ" EXACT [OBOL:automatic] xref: EMAPA:37309 {source="MA:th"} xref: MA:0000646 is_a: UBERON:0012359 ! pedal digitopodium bone relationship: part_of UBERON:5101466 ! pedal digit digitopodial skeleton property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0004249 name: manual digit bone namespace: uberon def: "A bone that is part of a forelimb digit. Typically phalanges but may include sesamoids." [https://orcid.org/0000-0002-6601-2165] synonym: "digital bone of hand" EXACT [] synonym: "digital bone of manus" EXACT [] synonym: "finger bone" EXACT [OBOL:automatic] synonym: "fore limb digit bone" EXACT [OBOL:accepted] synonym: "hand digit bone" EXACT [MA:0000622] synonym: "hand digit bone" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] xref: EMAPA:37305 {source="MA:th"} xref: MA:0000622 is_a: UBERON:0012358 ! manual digitopodium bone relationship: part_of UBERON:5102389 ! manual digit digitopodial skeleton property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0004250 name: upper arm bone namespace: uberon def: "A bone that is part of a forelimb stylopod [Automatically generated definition]." [https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376, OBOL:automatic] comment: May be merged into humerus. See: https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376 synonym: "humerus" NARROW [https://sourceforge.net/tracker/index.php?func=detail&aid=3586533&group_id=76834&atid=1205376] xref: EMAPA:35892 xref: MA:0000604 is_a: UBERON:0003460 ! arm bone property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0004251 name: hindlimb zeugopod bone namespace: uberon def: "A bone that is part of a lower leg [Automatically generated definition]." [OBOL:automatic] synonym: "bone of hind limb middle limb segment" EXACT [OBOL:automatic] synonym: "bone of hind limb zeugopod" EXACT [OBOL:automatic] synonym: "bone of hindlimb middle limb segment" EXACT [OBOL:automatic] synonym: "bone of hindlimb zeugopod" EXACT [OBOL:automatic] synonym: "bone of inferior member middle limb segment" EXACT [OBOL:automatic] synonym: "bone of inferior member zeugopod" EXACT [OBOL:automatic] synonym: "bone of intermediate segment of free lower limb" EXACT [OBOL:automatic] synonym: "bone of lower extremity middle limb segment" EXACT [OBOL:automatic] synonym: "bone of lower extremity zeugopod" EXACT [OBOL:automatic] synonym: "bone of lower leg" EXACT [OBOL:automatic] synonym: "bone of middle limb segment of hind limb" EXACT [OBOL:automatic] synonym: "bone of middle limb segment of hindlimb" EXACT [OBOL:automatic] synonym: "bone of middle limb segment of inferior member" EXACT [OBOL:automatic] synonym: "bone of middle limb segment of lower extremity" EXACT [OBOL:automatic] synonym: "bone of zeugopod of hind limb" EXACT [OBOL:automatic] synonym: "bone of zeugopod of hindlimb" EXACT [OBOL:automatic] synonym: "bone of zeugopod of inferior member" EXACT [OBOL:automatic] synonym: "bone of zeugopod of leg" EXACT [OBOL:automatic] synonym: "bone of zeugopod of lower extremity" EXACT [OBOL:automatic] synonym: "bone organ of hind limb middle limb segment" EXACT [OBOL:automatic] synonym: "bone organ of hind limb zeugopod" EXACT [OBOL:automatic] synonym: "bone organ of hindlimb middle limb segment" EXACT [OBOL:automatic] synonym: "bone organ of hindlimb zeugopod" EXACT [OBOL:automatic] synonym: "bone organ of inferior member middle limb segment" EXACT [OBOL:automatic] synonym: "bone organ of inferior member zeugopod" EXACT [OBOL:automatic] synonym: "bone organ of intermediate segment of free lower limb" EXACT [OBOL:automatic] synonym: "bone organ of lower extremity middle limb segment" EXACT [OBOL:automatic] synonym: "bone organ of lower extremity zeugopod" EXACT [OBOL:automatic] synonym: "bone organ of lower leg" EXACT [OBOL:automatic] synonym: "bone organ of middle limb segment of hind limb" EXACT [OBOL:automatic] synonym: "bone organ of middle limb segment of hindlimb" EXACT [OBOL:automatic] synonym: "bone organ of middle limb segment of inferior member" EXACT [OBOL:automatic] synonym: "bone organ of middle limb segment of lower extremity" EXACT [OBOL:automatic] synonym: "bone organ of zeugopod of hind limb" EXACT [OBOL:automatic] synonym: "bone organ of zeugopod of hindlimb" EXACT [OBOL:automatic] synonym: "bone organ of zeugopod of inferior member" EXACT [OBOL:automatic] synonym: "bone organ of zeugopod of leg" EXACT [OBOL:automatic] synonym: "bone organ of zeugopod of lower extremity" EXACT [OBOL:automatic] synonym: "hind limb middle limb segment bone" EXACT [OBOL:automatic] synonym: "hind limb middle limb segment bone organ" EXACT [OBOL:automatic] synonym: "hind limb zeugopod bone" EXACT [OBOL:automatic] synonym: "hind limb zeugopod bone organ" EXACT [OBOL:automatic] synonym: "hindlimb middle limb segment bone" EXACT [OBOL:automatic] synonym: "hindlimb middle limb segment bone organ" EXACT [OBOL:automatic] synonym: "hindlimb zeugopod bone" EXACT [OBOL:automatic] synonym: "hindlimb zeugopod bone organ" EXACT [OBOL:automatic] synonym: "inferior member middle limb segment bone" EXACT [OBOL:automatic] synonym: "inferior member middle limb segment bone organ" EXACT [OBOL:automatic] synonym: "inferior member zeugopod bone" EXACT [OBOL:automatic] synonym: "inferior member zeugopod bone organ" EXACT [OBOL:automatic] synonym: "intermediate segment of free lower limb bone" EXACT [OBOL:automatic] synonym: "intermediate segment of free lower limb bone organ" EXACT [OBOL:automatic] synonym: "lower extremity middle limb segment bone" EXACT [OBOL:automatic] synonym: "lower extremity middle limb segment bone organ" EXACT [OBOL:automatic] synonym: "lower extremity zeugopod bone" EXACT [OBOL:automatic] synonym: "lower extremity zeugopod bone organ" EXACT [OBOL:automatic] synonym: "lower leg bone" EXACT [MA:0000676] synonym: "middle limb segment of hind limb bone" EXACT [OBOL:automatic] synonym: "middle limb segment of hind limb bone organ" EXACT [OBOL:automatic] synonym: "middle limb segment of hindlimb bone" EXACT [OBOL:automatic] synonym: "middle limb segment of hindlimb bone organ" EXACT [OBOL:automatic] synonym: "middle limb segment of inferior member bone" EXACT [OBOL:automatic] synonym: "middle limb segment of inferior member bone organ" EXACT [OBOL:automatic] synonym: "middle limb segment of lower extremity bone" EXACT [OBOL:automatic] synonym: "middle limb segment of lower extremity bone organ" EXACT [OBOL:automatic] synonym: "zeugopod of hind limb bone" EXACT [OBOL:automatic] synonym: "zeugopod of hind limb bone organ" EXACT [OBOL:automatic] synonym: "zeugopod of hindlimb bone" EXACT [OBOL:automatic] synonym: "zeugopod of hindlimb bone organ" EXACT [OBOL:automatic] synonym: "zeugopod of inferior member bone" EXACT [OBOL:automatic] synonym: "zeugopod of inferior member bone organ" EXACT [OBOL:automatic] synonym: "zeugopod of leg bone" EXACT [OBOL:automatic] synonym: "zeugopod of leg bone organ" EXACT [OBOL:automatic] synonym: "zeugopod of lower extremity bone" EXACT [OBOL:automatic] synonym: "zeugopod of lower extremity bone organ" EXACT [OBOL:automatic] xref: EMAPA:35519 xref: MA:0000676 is_a: UBERON:0005893 ! leg bone property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0004300 name: distal phalanx namespace: uberon def: "Distal-most phalanx within a digit." [http://orcid.org/0000-0002-6601-2165, https://github.com/obophenotype/uberon/issues/120] subset: pheno_slim synonym: "phalanx distalis" EXACT [Wikipedia:Distal_phalanges] synonym: "phalanx distalis" RELATED OMO:0003011 [Wikipedia:Distal_phalanges] synonym: "terminal phalanx" EXACT [AAO:0010676] synonym: "ungual phalanx" EXACT [http://www.medilexicon.com/medicaldictionary.php?t=67679] xref: AAO:0010676 xref: EMAPA:35287 xref: MA:0002914 xref: SCTID:299711006 xref: Wikipedia:Distal_phalanges is_a: UBERON:0003221 ! phalanx property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/ab/Scheme_human_hand_bones-en.svg" xsd:anyURI property_value: UBPROP:0000008 "In human anatomy, the distal phalanges of the four fingers and toes articulate proximally with the intermediate phalanges at the distal interphalangeal joints (DIP); in the thumb and big toe, with only two phalanges, the distal phalanges articulate proximally with the proximal phalanges. The distal phalanges carry and shape nails and claws and are therefore occasionally referred to as the ungual phalanges. The distal phalanges are cone-shaped in most mammals, including most primates, but relatively wide and flat in humans." xsd:string [Term] id: UBERON:0004301 name: middle phalanx namespace: uberon def: "A phalanx located between proximal and distal phalanges." [http://orcid.org/0000-0002-6601-2165] synonym: "intermediate phalanx" EXACT [] synonym: "medial phalanx" RELATED [] synonym: "penultimate phalanx" RELATED [AAO:0010677] synonym: "phalanx 2" RELATED [] synonym: "phalanx II" RELATED [] xref: AAO:0010677 xref: EMAPA:35572 xref: MA:0002915 xref: SCTID:299710007 xref: Wikipedia:Intermediate_phalanges is_a: UBERON:0003221 ! phalanx property_value: IAO:0000116 "consider using numbering system, and axioms to the effect that there is a single middle phalanx per finger in humans. This should perhaps be renamed 'intermediate phalanx', leaving the term middle phalanx open for the specific intermediate phalanx of a 3-phalanx digit" xsd:string property_value: UBPROP:0000008 "in some groups such as whales, there are multiple intermediate phalanges" xsd:string property_value: UBPROP:0000008 "Intermediate phalanges are bones found in the limbs of most vertebrates. In humans, they are the bones of the finger and toe which lie in the middle, between the two wrinkly joints. The thumb and big toe do not have intermediate phalanges. In most other vertebrates, they have a corresponding place in their limbs, whether they be paw, wing, hoof or fin" xsd:string {source="WP"} [Term] id: UBERON:0004302 name: proximal phalanx namespace: uberon def: "Proximal-most phalanx within a digit." [http://orcid.org/0000-0002-6601-2165] synonym: "phalanx 1" EXACT [] synonym: "phalanx I" EXACT [] synonym: "proximal-most phalanx" EXACT [AAO:0010680] xref: AAO:0010680 xref: EMAPA:35716 xref: MA:0002916 xref: SCTID:299708005 xref: Wikipedia:Proximal_phalanges is_a: UBERON:0003221 ! phalanx property_value: UBPROP:0000008 "Proximal phalanges are bones found in the limbs of most vertebrates. In humans, they are the bones at the base of a toe or finger, the prominent, knobby ends of which are often called the knuckles. In other vertebrates, proximal phalanges have a similar placement in the corresponding limbs, be they paw, wing or fin. In many species, they are the longest and thickest phalanx ('finger' bone)" xsd:string {source="WP"} property_value: UBPROP:0000105 "1" xsd:nonNegativeInteger [Term] id: UBERON:0004311 name: distal phalanx of manual digit 2 namespace: uberon def: "A distal phalanx that is part of a hand digit 2 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2nd digit of hand distal phalanx" EXACT [OBOL:automatic] synonym: "2nd finger distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 2nd digit of hand" EXACT [OBOL:automatic] synonym: "distal phalanx of 2nd finger" EXACT [OBOL:automatic] synonym: "distal phalanx of index finger" EXACT [FMA:23946] synonym: "distal phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of second digit of hand" EXACT [FMA:23946] synonym: "distal phalanx of second finger" EXACT [OBOL:automatic] synonym: "hand digit 2 distal phalanx" EXACT [OBOL:automatic] synonym: "second distal phalanx of hand" EXACT [FMA:23946] synonym: "second finger distal phalanx" EXACT [OBOL:automatic] xref: FMA:23946 xref: SCTID:361784003 is_a: UBERON:0003636 ! manual digit 2 phalanx is_a: UBERON:0003865 ! distal phalanx of manus is_a: UBERON:0014484 ! distal phalanx of digit 2 relationship: part_of UBERON:5103622 ! manual digit 2 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004312 name: distal phalanx of manual digit 3 namespace: uberon def: "A distal phalanx that is part of a hand digit 3 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "3rd digit of hand distal phalanx" EXACT [OBOL:automatic] synonym: "3rd finger distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 3rd digit of hand" EXACT [OBOL:automatic] synonym: "distal phalanx of 3rd finger" EXACT [OBOL:automatic] synonym: "distal phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of middle finger" EXACT [FMA:23947] synonym: "distal phalanx of third digit of hand" EXACT [FMA:23947] synonym: "distal phalanx of third finger" EXACT [OBOL:automatic] synonym: "equine 3rd phalanx of forelimb digit 3" EXACT [https://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "equine forelimb distal phalanx" EXACT [https://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "forelimb coffin bone" NARROW [NCBITaxon:9787] synonym: "forelimb medial claw of artiodactyl" NARROW [NCBITaxon:91561] synonym: "forelimb medial claw of ruminant hoof" NARROW [NCBITaxon:91561] synonym: "forelimb medial ungual phalanx of artiodactyl" NARROW [NCBITaxon:91561] synonym: "forelimb pedal bone" NARROW [NCBITaxon:9787] synonym: "hand digit 3 distal phalanx" EXACT [OBOL:automatic] synonym: "third distal phalanx of hand" EXACT [FMA:23947] synonym: "third finger distal phalanx" EXACT [OBOL:automatic] xref: FMA:23947 xref: SCTID:361786001 xref: SCTID:370674002 is_a: UBERON:0003637 ! manual digit 3 phalanx is_a: UBERON:0003865 ! distal phalanx of manus is_a: UBERON:0014485 ! distal phalanx of digit 3 relationship: part_of UBERON:5103623 ! manual digit 3 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004313 name: distal phalanx of manual digit 4 namespace: uberon def: "A distal phalanx that is part of a hand digit 4 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4th digit of hand distal phalanx" EXACT [OBOL:automatic] synonym: "4th finger distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 4th digit of hand" EXACT [OBOL:automatic] synonym: "distal phalanx of 4th finger" EXACT [OBOL:automatic] synonym: "distal phalanx of fourth digit of hand" EXACT [FMA:23948] synonym: "distal phalanx of fourth finger" EXACT [OBOL:automatic] synonym: "distal phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of ring finger" EXACT [FMA:23948] synonym: "fourth distal phalanx of hand" EXACT [FMA:23948] synonym: "fourth finger distal phalanx" EXACT [OBOL:automatic] synonym: "hand digit 4 distal phalanx" EXACT [OBOL:automatic] xref: FMA:23948 xref: SCTID:361788000 is_a: UBERON:0003638 ! manual digit 4 phalanx is_a: UBERON:0003865 ! distal phalanx of manus is_a: UBERON:0014486 ! distal phalanx of digit 4 relationship: part_of UBERON:5103624 ! manual digit 4 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004314 name: distal phalanx of manual digit 5 namespace: uberon def: "A distal phalanx that is part of a hand digit 5 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5th digit of hand distal phalanx" EXACT [OBOL:automatic] synonym: "5th finger distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 5th digit of hand" EXACT [OBOL:automatic] synonym: "distal phalanx of 5th finger" EXACT [OBOL:automatic] synonym: "distal phalanx of fifth digit of hand" EXACT [FMA:23949] synonym: "distal phalanx of fifth finger" EXACT [OBOL:automatic] synonym: "distal phalanx of little finger" EXACT [FMA:23949] synonym: "distal phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "fifth distal phalanx of hand" EXACT [FMA:23949] synonym: "fifth finger distal phalanx" EXACT [OBOL:automatic] synonym: "hand digit 5 distal phalanx" EXACT [OBOL:automatic] xref: FMA:23949 xref: SCTID:361790004 is_a: UBERON:0003639 ! manual digit 5 phalanx is_a: UBERON:0003865 ! distal phalanx of manus is_a: UBERON:0014487 ! distal phalanx of digit 5 relationship: part_of UBERON:5103625 ! manual digit 5 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004315 name: distal phalanx of pedal digit 1 namespace: uberon def: "A distal phalanx that is part of a foot digit 1 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "distal phalanx of big toe" EXACT [FMA:32627] synonym: "distal phalanx of first digit of foot" EXACT [FMA:32627] synonym: "distal phalanx of foot digit 1" EXACT [OBOL:automatic] synonym: "distal phalanx of great toe" EXACT [FMA:32627] synonym: "distal phalanx of hallux" EXACT [OBOL:automatic] synonym: "distal phalanx of pedal digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "first distal phalanx of foot" EXACT [FMA:32627] synonym: "foot digit 1 distal phalanx" EXACT [OBOL:automatic] synonym: "hallux distal phalanx" EXACT [OBOL:automatic] xref: FMA:32627 xref: SCTID:361799003 is_a: UBERON:0003640 ! pedal digit 1 phalanx is_a: UBERON:0003867 ! distal phalanx of pes is_a: UBERON:0014483 ! distal phalanx of digit 1 relationship: part_of UBERON:5103631 ! pedal digit 1 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004316 name: distal phalanx of pedal digit 2 namespace: uberon def: "A distal phalanx that is part of a foot digit 2 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2nd toe distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 2nd toe" EXACT [OBOL:automatic] synonym: "distal phalanx of foot digit 2" EXACT [OBOL:automatic] synonym: "distal phalanx of pedal digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of second digit of foot" EXACT [FMA:32628] synonym: "distal phalanx of second toe" EXACT [FMA:32628] synonym: "distal phalanx of the 2nd toe" EXACT [OBOL:automatic] synonym: "foot digit 2 distal phalanx" EXACT [OBOL:automatic] synonym: "second distal phalanx of foot" EXACT [FMA:32628] xref: FMA:32628 xref: SCTID:361801000 is_a: UBERON:0003641 ! pedal digit 2 phalanx is_a: UBERON:0003867 ! distal phalanx of pes is_a: UBERON:0014484 ! distal phalanx of digit 2 relationship: part_of UBERON:5103632 ! pedal digit 2 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004317 name: distal phalanx of pedal digit 3 namespace: uberon def: "A distal phalanx that is part of a foot digit 3 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "3rd toe distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 3rd toe" EXACT [OBOL:automatic] synonym: "distal phalanx of foot digit 3" EXACT [OBOL:automatic] synonym: "distal phalanx of pedal digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of the 3rd toe" EXACT [OBOL:automatic] synonym: "distal phalanx of third digit of foot" EXACT [FMA:32629] synonym: "distal phalanx of third toe" EXACT [FMA:32629] synonym: "equine 3rd phalanx of hindlimb digit 3" EXACT [https://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "equine hindlimb distal phalanx" EXACT [https://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "foot digit 3 distal phalanx" EXACT [OBOL:automatic] synonym: "hindlimb coffin bone" NARROW [NCBITaxon:9787] synonym: "hindlimb medial claw of artiodactyl" NARROW [NCBITaxon:91561] synonym: "hindlimb medial claw of ruminant hoof" NARROW [NCBITaxon:91561] synonym: "hindlimb medial ungual phalanx of artiodactyl" NARROW [NCBITaxon:91561] synonym: "hindlimb pedal bone" NARROW [NCBITaxon:9787] synonym: "third distal phalanx of foot" EXACT [FMA:32629] xref: FMA:32629 xref: SCTID:361803002 xref: SCTID:370673008 is_a: UBERON:0003642 ! pedal digit 3 phalanx is_a: UBERON:0003867 ! distal phalanx of pes is_a: UBERON:0014485 ! distal phalanx of digit 3 relationship: part_of UBERON:5103633 ! pedal digit 3 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004318 name: distal phalanx of pedal digit 4 namespace: uberon def: "A distal phalanx that is part of a foot digit 4 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4th toe distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 4th toe" EXACT [OBOL:automatic] synonym: "distal phalanx of foot digit 4" EXACT [OBOL:automatic] synonym: "distal phalanx of fourth digit of foot" EXACT [FMA:32630] synonym: "distal phalanx of fourth toe" EXACT [FMA:32630] synonym: "distal phalanx of pedal digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of the 4th toe" EXACT [OBOL:automatic] synonym: "foot digit 4 distal phalanx" EXACT [OBOL:automatic] synonym: "fourth distal phalanx of foot" EXACT [FMA:32630] xref: FMA:32630 xref: SCTID:361805009 is_a: UBERON:0003862 ! pedal digit 4 phalanx is_a: UBERON:0003867 ! distal phalanx of pes is_a: UBERON:0014486 ! distal phalanx of digit 4 relationship: part_of UBERON:5103634 ! pedal digit 4 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004319 name: distal phalanx of pedal digit 5 namespace: uberon def: "A distal phalanx that is part of a foot digit 5 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5th toe distal phalanx" EXACT [OBOL:automatic] synonym: "distal phalanx of 5th toe" EXACT [OBOL:automatic] synonym: "distal phalanx of fifth digit of foot" EXACT [FMA:32631] synonym: "distal phalanx of fifth toe" EXACT [FMA:32631] synonym: "distal phalanx of foot digit 5" EXACT [OBOL:automatic] synonym: "distal phalanx of little toe" EXACT [FMA:32631] synonym: "distal phalanx of pedal digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of the 5th toe" EXACT [OBOL:automatic] synonym: "fifth distal phalanx of foot" EXACT [FMA:32631] synonym: "foot digit 5 distal phalanx" EXACT [OBOL:automatic] xref: FMA:32631 xref: SCTID:10770001 xref: SCTID:244674003 is_a: UBERON:0003863 ! pedal digit 5 phalanx is_a: UBERON:0003867 ! distal phalanx of pes is_a: UBERON:0014487 ! distal phalanx of digit 5 relationship: part_of UBERON:5103635 ! pedal digit 5 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004320 name: middle phalanx of manual digit 2 namespace: uberon def: "A middle phalanx that is part of a hand digit 2 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2nd digit of hand intermediate phalanx" EXACT [OBOL:automatic] synonym: "2nd digit of hand middle phalanx" EXACT [OBOL:automatic] synonym: "2nd finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "2nd finger middle phalanx" EXACT [OBOL:automatic] synonym: "hand digit 2 intermediate phalanx" EXACT [OBOL:automatic] synonym: "hand digit 2 middle phalanx" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 2nd digit of hand" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 2nd finger" EXACT [OBOL:automatic] synonym: "intermediate phalanx of hand digit 2" EXACT [OBOL:automatic] synonym: "intermediate phalanx of second finger" EXACT [OBOL:automatic] synonym: "middle phalanx of 2nd digit of hand" EXACT [OBOL:automatic] synonym: "middle phalanx of 2nd finger" EXACT [OBOL:automatic] synonym: "middle phalanx of index finger" EXACT [FMA:23933] synonym: "middle phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of second digit of hand" EXACT [FMA:23933] synonym: "middle phalanx of second finger" EXACT [OBOL:automatic] synonym: "second finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "second finger middle phalanx" EXACT [OBOL:automatic] synonym: "second middle phalanx of hand" EXACT [FMA:23933] xref: FMA:23933 xref: SCTID:263407002 is_a: UBERON:0003636 ! manual digit 2 phalanx is_a: UBERON:0003864 ! middle phalanx of manus is_a: UBERON:0014488 ! middle phalanx of digit 2 relationship: part_of UBERON:5103622 ! manual digit 2 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004321 name: middle phalanx of manual digit 3 namespace: uberon def: "A middle phalanx that is part of a hand digit 3 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "3rd digit of hand intermediate phalanx" EXACT [OBOL:automatic] synonym: "3rd digit of hand middle phalanx" EXACT [OBOL:automatic] synonym: "3rd finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "3rd finger middle phalanx" EXACT [OBOL:automatic] synonym: "forelimb digit III P2" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "forelimb short pastern bone" NARROW [http://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "hand digit 3 intermediate phalanx" EXACT [OBOL:automatic] synonym: "hand digit 3 middle phalanx" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 3rd digit of hand" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 3rd finger" EXACT [OBOL:automatic] synonym: "intermediate phalanx of hand digit 3" EXACT [OBOL:automatic] synonym: "intermediate phalanx of third finger" EXACT [OBOL:automatic] synonym: "middle phalanx of 3rd digit of hand" EXACT [OBOL:automatic] synonym: "middle phalanx of 3rd finger" EXACT [OBOL:automatic] synonym: "middle phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of middle finger" EXACT [OBOL:automatic] synonym: "middle phalanx of third digit of hand" EXACT [FMA:23934] synonym: "middle phalanx of third finger" EXACT [OBOL:automatic] synonym: "third finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "third finger middle phalanx" EXACT [OBOL:automatic] synonym: "third middle phalanx of hand" EXACT [FMA:23934] xref: FMA:23934 xref: SCTID:263408007 xref: SCTID:370729003 is_a: UBERON:0003637 ! manual digit 3 phalanx is_a: UBERON:0003864 ! middle phalanx of manus is_a: UBERON:0014489 ! middle phalanx of digit 3 relationship: part_of UBERON:5103623 ! manual digit 3 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004322 name: middle phalanx of manual digit 4 namespace: uberon def: "A middle phalanx that is part of a hand digit 4 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4th digit of hand intermediate phalanx" EXACT [OBOL:automatic] synonym: "4th digit of hand middle phalanx" EXACT [OBOL:automatic] synonym: "4th finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "4th finger middle phalanx" EXACT [OBOL:automatic] synonym: "fourth finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "fourth finger middle phalanx" EXACT [OBOL:automatic] synonym: "fourth middle phalanx of hand" EXACT [FMA:23935] synonym: "hand digit 4 intermediate phalanx" EXACT [OBOL:automatic] synonym: "hand digit 4 middle phalanx" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 4th digit of hand" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 4th finger" EXACT [OBOL:automatic] synonym: "intermediate phalanx of fourth finger" EXACT [OBOL:automatic] synonym: "intermediate phalanx of hand digit 4" EXACT [OBOL:automatic] synonym: "middle phalanx of 4th digit of hand" EXACT [OBOL:automatic] synonym: "middle phalanx of 4th finger" EXACT [OBOL:automatic] synonym: "middle phalanx of fourth digit of hand" EXACT [FMA:23935] synonym: "middle phalanx of fourth finger" EXACT [OBOL:automatic] synonym: "middle phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of ring finger" EXACT [OBOL:automatic] xref: FMA:23935 xref: SCTID:263409004 is_a: UBERON:0003638 ! manual digit 4 phalanx is_a: UBERON:0003864 ! middle phalanx of manus is_a: UBERON:0014490 ! middle phalanx of digit 4 relationship: part_of UBERON:5103624 ! manual digit 4 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004323 name: middle phalanx of manual digit 5 namespace: uberon def: "A middle phalanx that is part of a hand digit 5 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5th digit of hand intermediate phalanx" EXACT [OBOL:automatic] synonym: "5th digit of hand middle phalanx" EXACT [OBOL:automatic] synonym: "5th finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "5th finger middle phalanx" EXACT [OBOL:automatic] synonym: "fifth finger intermediate phalanx" EXACT [OBOL:automatic] synonym: "fifth finger middle phalanx" EXACT [OBOL:automatic] synonym: "fifth middle phalanx of hand" EXACT [FMA:23936] synonym: "hand digit 5 intermediate phalanx" EXACT [OBOL:automatic] synonym: "hand digit 5 middle phalanx" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 5th digit of hand" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 5th finger" EXACT [OBOL:automatic] synonym: "intermediate phalanx of fifth finger" EXACT [OBOL:automatic] synonym: "intermediate phalanx of hand digit 5" EXACT [OBOL:automatic] synonym: "middle phalanx of 5th digit of hand" EXACT [OBOL:automatic] synonym: "middle phalanx of 5th finger" EXACT [OBOL:automatic] synonym: "middle phalanx of fifth digit of hand" EXACT [FMA:23936] synonym: "middle phalanx of fifth finger" EXACT [OBOL:automatic] synonym: "middle phalanx of little finger" EXACT [OBOL:automatic] synonym: "middle phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:23936 xref: SCTID:263410009 is_a: UBERON:0003639 ! manual digit 5 phalanx is_a: UBERON:0003864 ! middle phalanx of manus is_a: UBERON:0014491 ! middle phalanx of digit 5 relationship: part_of UBERON:5103625 ! manual digit 5 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004324 name: middle phalanx of pedal digit 2 namespace: uberon def: "A middle phalanx that is part of a foot digit 2 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2nd toe intermediate phalanx" EXACT [OBOL:automatic] synonym: "2nd toe middle phalanx" EXACT [OBOL:automatic] synonym: "foot digit 2 intermediate phalanx" EXACT [OBOL:automatic] synonym: "foot digit 2 middle phalanx" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 2nd toe" EXACT [OBOL:automatic] synonym: "intermediate phalanx of foot digit 2" EXACT [OBOL:automatic] synonym: "middle phalanx of 2nd toe" EXACT [OBOL:automatic] synonym: "middle phalanx of foot digit 2" EXACT [OBOL:automatic] synonym: "middle phalanx of pedal digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of second digit of foot" EXACT [FMA:32623] synonym: "middle phalanx of second toe" EXACT [FMA:32623] synonym: "middle phalanx of the 2nd toe" EXACT [OBOL:automatic] synonym: "second middle phalanx of foot" EXACT [FMA:32623] xref: FMA:32623 xref: SCTID:182152006 is_a: UBERON:0003641 ! pedal digit 2 phalanx is_a: UBERON:0003866 ! middle phalanx of pes is_a: UBERON:0014488 ! middle phalanx of digit 2 relationship: part_of UBERON:5103632 ! pedal digit 2 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004325 name: middle phalanx of pedal digit 3 namespace: uberon def: "A middle phalanx that is part of a foot digit 3 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "3rd toe intermediate phalanx" EXACT [OBOL:automatic] synonym: "3rd toe middle phalanx" EXACT [OBOL:automatic] synonym: "foot digit 3 intermediate phalanx" EXACT [OBOL:automatic] synonym: "foot digit 3 middle phalanx" EXACT [OBOL:automatic] synonym: "hindlimb digit III P2" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "hindlimb short pastern bone" NARROW [http://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "intermediate phalanx of 3rd toe" EXACT [OBOL:automatic] synonym: "intermediate phalanx of foot digit 3" EXACT [OBOL:automatic] synonym: "middle phalanx of 3rd toe" EXACT [OBOL:automatic] synonym: "middle phalanx of foot digit 3" EXACT [OBOL:automatic] synonym: "middle phalanx of pedal digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of the 3rd toe" EXACT [OBOL:automatic] synonym: "middle phalanx of third digit of foot" EXACT [FMA:32624] synonym: "middle phalanx of third toe" EXACT [FMA:32624] synonym: "third middle phalanx of foot" EXACT [FMA:32624] xref: FMA:32624 xref: SCTID:182154007 xref: SCTID:370677009 is_a: UBERON:0003642 ! pedal digit 3 phalanx is_a: UBERON:0003866 ! middle phalanx of pes is_a: UBERON:0014489 ! middle phalanx of digit 3 relationship: part_of UBERON:5103633 ! pedal digit 3 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004326 name: middle phalanx of pedal digit 4 namespace: uberon def: "A middle phalanx that is part of a pedal digit 4 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4th toe intermediate phalanx" EXACT [OBOL:automatic] synonym: "4th toe middle phalanx" EXACT [OBOL:automatic] synonym: "foot digit 4 intermediate phalanx" EXACT [OBOL:automatic] synonym: "foot digit 4 middle phalanx" EXACT [OBOL:automatic] synonym: "fourth middle phalanx of foot" EXACT [FMA:32625] synonym: "intermediate phalanx of 4th toe" EXACT [OBOL:automatic] synonym: "intermediate phalanx of foot digit 4" EXACT [OBOL:automatic] synonym: "middle phalanx of 4th toe" EXACT [OBOL:automatic] synonym: "middle phalanx of foot digit 4" EXACT [OBOL:automatic] synonym: "middle phalanx of fourth digit of foot" EXACT [FMA:32625] synonym: "middle phalanx of fourth toe" EXACT [OBOL:automatic] synonym: "middle phalanx of pedal digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of the 4th toe" EXACT [OBOL:automatic] xref: FMA:32625 xref: SCTID:182156009 is_a: UBERON:0003862 ! pedal digit 4 phalanx is_a: UBERON:0003866 ! middle phalanx of pes is_a: UBERON:0014490 ! middle phalanx of digit 4 relationship: part_of UBERON:5103634 ! pedal digit 4 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004327 name: middle phalanx of pedal digit 5 namespace: uberon def: "A middle phalanx that is part of a pedal digit 5 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5th toe intermediate phalanx" EXACT [OBOL:automatic] synonym: "5th toe middle phalanx" EXACT [OBOL:automatic] synonym: "foot digit 5 intermediate phalanx" EXACT [OBOL:automatic] synonym: "foot digit 5 middle phalanx" EXACT [OBOL:automatic] synonym: "intermediate phalanx of 5th toe" EXACT [OBOL:automatic] synonym: "intermediate phalanx of foot digit 5" EXACT [OBOL:automatic] synonym: "middle phalanx of 5th toe" EXACT [OBOL:automatic] synonym: "middle phalanx of foot digit 5" EXACT [OBOL:automatic] synonym: "middle phalanx of little toe" EXACT [OBOL:automatic] synonym: "middle phalanx of pedal digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of the 5th toe" EXACT [OBOL:automatic] xref: FMA:230984 xref: SCTID:182158005 xref: SCTID:244673009 is_a: UBERON:0003863 ! pedal digit 5 phalanx is_a: UBERON:0003866 ! middle phalanx of pes is_a: UBERON:0014491 ! middle phalanx of digit 5 relationship: part_of UBERON:5103635 ! pedal digit 5 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004328 name: proximal phalanx of manual digit 2 namespace: uberon def: "A proximal phalanx that is part of a hand digit 2 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2nd digit of hand proximal phalanx" EXACT [OBOL:automatic] synonym: "2nd finger proximal phalanx" EXACT [OBOL:automatic] synonym: "hand digit 2 proximal phalanx" EXACT [OBOL:automatic] synonym: "manual digit 2 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "manual phalanx II-1" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 2nd digit of hand" EXACT [OBOL:automatic] synonym: "proximal phalanx of 2nd finger" EXACT [OBOL:automatic] synonym: "proximal phalanx of index finger" EXACT [FMA:23919] synonym: "proximal phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of second digit of hand" EXACT [FMA:23919] synonym: "proximal phalanx of second finger" EXACT [OBOL:automatic] synonym: "second finger proximal phalanx" EXACT [OBOL:automatic] synonym: "second proximal phalanx of hand" EXACT [FMA:23919] xref: FMA:23919 xref: SCTID:263403003 is_a: UBERON:0002234 ! proximal phalanx of manus is_a: UBERON:0003636 ! manual digit 2 phalanx is_a: UBERON:0014502 ! proximal phalanx of digit 2 relationship: part_of UBERON:5103622 ! manual digit 2 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004329 name: proximal phalanx of manual digit 3 namespace: uberon def: "A proximal phalanx that is part of a hand digit 3 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "3rd digit of hand proximal phalanx" EXACT [OBOL:automatic] synonym: "3rd finger proximal phalanx" EXACT [OBOL:automatic] synonym: "hand digit 3 proximal phalanx" EXACT [OBOL:automatic] synonym: "manual digit 3 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "manual phalanx III-1" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 3rd digit of hand" EXACT [OBOL:automatic] synonym: "proximal phalanx of 3rd finger" EXACT [OBOL:automatic] synonym: "proximal phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of middle finger" EXACT [FMA:23920] synonym: "proximal phalanx of third digit of hand" EXACT [FMA:23920] synonym: "proximal phalanx of third finger" EXACT [OBOL:automatic] synonym: "third finger proximal phalanx" EXACT [OBOL:automatic] synonym: "third proximal phalanx of hand" EXACT [FMA:23920] xref: FMA:23920 xref: SCTID:263404009 xref: SCTID:370735003 is_a: UBERON:0002234 ! proximal phalanx of manus is_a: UBERON:0003637 ! manual digit 3 phalanx is_a: UBERON:0014503 ! proximal phalanx of digit 3 relationship: part_of UBERON:5103623 ! manual digit 3 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004330 name: proximal phalanx of manual digit 4 namespace: uberon def: "A proximal phalanx that is part of a hand digit 4 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4th digit of hand proximal phalanx" EXACT [OBOL:automatic] synonym: "4th finger proximal phalanx" EXACT [OBOL:automatic] synonym: "fourth finger proximal phalanx" EXACT [OBOL:automatic] synonym: "fourth proximal phalanx of hand" EXACT [FMA:23921] synonym: "hand digit 4 proximal phalanx" EXACT [OBOL:automatic] synonym: "manual digit 4 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "manual phalanx IV-1" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 4th digit of hand" EXACT [OBOL:automatic] synonym: "proximal phalanx of 4th finger" EXACT [OBOL:automatic] synonym: "proximal phalanx of fourth digit of hand" EXACT [FMA:23921] synonym: "proximal phalanx of fourth finger" EXACT [OBOL:automatic] synonym: "proximal phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of ring finger" EXACT [FMA:23921] xref: FMA:23921 xref: SCTID:263405005 is_a: UBERON:0002234 ! proximal phalanx of manus is_a: UBERON:0003638 ! manual digit 4 phalanx is_a: UBERON:0014504 ! proximal phalanx of digit 4 relationship: part_of UBERON:5103624 ! manual digit 4 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004331 name: proximal phalanx of manual digit 5 namespace: uberon def: "A proximal phalanx that is part of a hand digit 5 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5th digit of hand proximal phalanx" EXACT [OBOL:automatic] synonym: "5th finger proximal phalanx" EXACT [OBOL:automatic] synonym: "fifth finger proximal phalanx" EXACT [OBOL:automatic] synonym: "fifth proximal phalanx of hand" EXACT [FMA:23922] synonym: "hand digit 5 proximal phalanx" EXACT [OBOL:automatic] synonym: "manual digit 5 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "manual phalanx V-1" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 5th digit of hand" EXACT [OBOL:automatic] synonym: "proximal phalanx of 5th finger" EXACT [OBOL:automatic] synonym: "proximal phalanx of fifth digit of hand" EXACT [FMA:23922] synonym: "proximal phalanx of fifth finger" EXACT [OBOL:automatic] synonym: "proximal phalanx of little finger" EXACT [FMA:23922] synonym: "proximal phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:23922 xref: SCTID:263406006 is_a: UBERON:0002234 ! proximal phalanx of manus is_a: UBERON:0003639 ! manual digit 5 phalanx is_a: UBERON:0014505 ! proximal phalanx of digit 5 relationship: part_of UBERON:5103625 ! manual digit 5 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004332 name: proximal phalanx of pedal digit 1 namespace: uberon def: "A proximal phalanx that is part of a pedal digit 1 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "foot digit 1 proximal phalanx" EXACT [OBOL:automatic] synonym: "hallux proximal phalanx" EXACT [OBOL:automatic] synonym: "pedal phalanx I-1" EXACT [PHENOSCAPE:wd] synonym: "predal digit 1 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of big toe" EXACT [FMA:43252] synonym: "proximal phalanx of foot digit 1" EXACT [OBOL:automatic] synonym: "proximal phalanx of great toe" EXACT [FMA:43252] synonym: "proximal phalanx of hallux" EXACT [OBOL:automatic] synonym: "proximal phalanx of pedal digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of the 1st toe" EXACT [] xref: FMA:43252 xref: SCTID:182150003 is_a: UBERON:0003640 ! pedal digit 1 phalanx is_a: UBERON:0003868 ! proximal phalanx of pes is_a: UBERON:0014501 ! proximal phalanx of digit 1 relationship: part_of UBERON:5103631 ! pedal digit 1 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004333 name: proximal phalanx of pedal digit 2 namespace: uberon def: "A proximal phalanx that is part of a pedal digit 2 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "2nd toe proximal phalanx" EXACT [OBOL:automatic] synonym: "foot digit 2 proximal phalanx" EXACT [OBOL:automatic] synonym: "pedal phalanx II-1" EXACT [PHENOSCAPE:wd] synonym: "predal digit 2 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 2nd toe" EXACT [OBOL:automatic] synonym: "proximal phalanx of foot digit 2" EXACT [OBOL:automatic] synonym: "proximal phalanx of pedal digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of second digit of foot" EXACT [FMA:32618] synonym: "proximal phalanx of second toe" EXACT [FMA:32618] synonym: "proximal phalanx of the 2nd toe" EXACT [] synonym: "second proximal phalanx of foot" EXACT [FMA:32618] xref: FMA:32618 xref: SCTID:182151004 is_a: UBERON:0003641 ! pedal digit 2 phalanx is_a: UBERON:0003868 ! proximal phalanx of pes is_a: UBERON:0014502 ! proximal phalanx of digit 2 relationship: part_of UBERON:5103632 ! pedal digit 2 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004334 name: proximal phalanx of pedal digit 3 namespace: uberon def: "A proximal phalanx that is part of a pedal digit 3 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "3rd toe proximal phalanx" EXACT [OBOL:automatic] synonym: "foot digit 3 proximal phalanx" EXACT [OBOL:automatic] synonym: "pedal phalanx III-1" EXACT [PHENOSCAPE:wd] synonym: "predal digit 3 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 3rd toe" EXACT [OBOL:automatic] synonym: "proximal phalanx of foot digit 3" EXACT [OBOL:automatic] synonym: "proximal phalanx of pedal digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of the 3rd toe" EXACT [] synonym: "proximal phalanx of third digit of foot" EXACT [FMA:32619] synonym: "proximal phalanx of third toe" EXACT [FMA:32619] synonym: "third proximal phalanx of foot" EXACT [FMA:32619] xref: FMA:32619 xref: SCTID:182153001 xref: SCTID:370734004 is_a: UBERON:0003642 ! pedal digit 3 phalanx is_a: UBERON:0003868 ! proximal phalanx of pes is_a: UBERON:0014503 ! proximal phalanx of digit 3 relationship: part_of UBERON:5103633 ! pedal digit 3 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004335 name: proximal phalanx of pedal digit 4 namespace: uberon def: "A proximal phalanx that is part of a pedal digit 4 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "4th toe proximal phalanx" EXACT [OBOL:automatic] synonym: "foot digit 4 proximal phalanx" EXACT [OBOL:automatic] synonym: "fourth proximal phalanx of foot" EXACT [FMA:32620] synonym: "pedal phalanx IV-1" EXACT [PHENOSCAPE:wd] synonym: "predal digit 4 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 4th toe" EXACT [OBOL:automatic] synonym: "proximal phalanx of foot digit 4" EXACT [OBOL:automatic] synonym: "proximal phalanx of fourth digit of foot" EXACT [FMA:32620] synonym: "proximal phalanx of fourth toe" EXACT [FMA:32620] synonym: "proximal phalanx of pedal digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of the 4th toe" EXACT [] xref: FMA:32620 xref: SCTID:182155008 is_a: UBERON:0003862 ! pedal digit 4 phalanx is_a: UBERON:0003868 ! proximal phalanx of pes is_a: UBERON:0014504 ! proximal phalanx of digit 4 relationship: part_of UBERON:5103634 ! pedal digit 4 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004336 name: proximal phalanx of pedal digit 5 namespace: uberon def: "A proximal phalanx that is part of a pedal digit 5 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "5th toe proximal phalanx" EXACT [OBOL:automatic] synonym: "fifth proximal phalanx of foot" EXACT [FMA:32621] synonym: "foot digit 5 proximal phalanx" EXACT [OBOL:automatic] synonym: "pedal phalanx V-1" EXACT [PHENOSCAPE:wd] synonym: "predal digit 5 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 5th toe" EXACT [OBOL:automatic] synonym: "proximal phalanx of fifth digit of foot" EXACT [FMA:32621] synonym: "proximal phalanx of fifth toe" EXACT [FMA:32621] synonym: "proximal phalanx of foot digit 5" EXACT [OBOL:automatic] synonym: "proximal phalanx of little toe" EXACT [OBOL:automatic] synonym: "proximal phalanx of pedal digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of the 5th toe" EXACT [] xref: FMA:32621 xref: SCTID:182157000 xref: SCTID:244672004 is_a: UBERON:0003863 ! pedal digit 5 phalanx is_a: UBERON:0003868 ! proximal phalanx of pes is_a: UBERON:0014505 ! proximal phalanx of digit 5 relationship: part_of UBERON:5103635 ! pedal digit 5 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004337 name: distal phalanx of manual digit 1 namespace: uberon def: "A distal phalanx that is part of a hand digit 1 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "distal phalanx of first digit of hand" EXACT [FMA:23945] synonym: "distal phalanx of manual digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of thumb" EXACT [OBOL:automatic] synonym: "first distal phalanx of hand" EXACT [FMA:23945] synonym: "manual digit 1 distal phalanx" EXACT [PHENOSCAPE:wd] synonym: "PDP" EXACT [Wikipedia:Distal_phalanges#Thumb] synonym: "pollical distal phalanx" EXACT [Wikipedia:Distal_phalanges#Thumb] synonym: "thumb distal phalanx" EXACT [OBOL:automatic] xref: FMA:23945 xref: SCTID:182007006 is_a: UBERON:0003620 ! manual digit 1 phalanx is_a: UBERON:0003865 ! distal phalanx of manus is_a: UBERON:0014483 ! distal phalanx of digit 1 relationship: part_of UBERON:5101463 ! manual digit 1 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "The human pollical distal phalanx (PDP) has a pronounced insertion for the flexor pollicis longus (asymmetric towards the radial side), an ungual fossa, and a pair of dissymmetric ungual spines (the ulnar being more prominent). This asymmetry is necessary to ensure that the thumb pulp is always facing the pulps of the other digits, an osteological configuration which provides the maximum contact surface with held objects." xsd:string {source="WP"} [Term] id: UBERON:0004338 name: proximal phalanx of manual digit 1 namespace: uberon def: "A proximal phalanx that is part of a hand digit 1 [Automatically generated definition]." [OBOL:automatic] subset: human_reference_atlas subset: pheno_slim synonym: "first proximal phalanx of hand" EXACT [FMA:23918] synonym: "manual digit 1 proximal phalanx" EXACT [PHENOSCAPE:wd] synonym: "manual phalanx I-1" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of first digit of hand" EXACT [FMA:23918] synonym: "proximal phalanx of manual digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of thumb" EXACT [OBOL:automatic] synonym: "thumb proximal" EXACT [OBOL:automatic] xref: FMA:23918 xref: SCTID:181992006 is_a: UBERON:0002234 ! proximal phalanx of manus is_a: UBERON:0003620 ! manual digit 1 phalanx is_a: UBERON:0014501 ! proximal phalanx of digit 1 relationship: part_of UBERON:5101463 ! manual digit 1 digitopodial skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0004375 name: bone of free limb or fin namespace: uberon def: "A bone that is part of an appendage [Automatically generated definition]." [OBOL:automatic] subset: homology_grouping synonym: "appendage bone" EXACT [] synonym: "bone of appendage" EXACT [] synonym: "bone of free segment of appendicular skeleton" EXACT [] is_a: UBERON:0010740 ! bone of appendage girdle complex relationship: part_of UBERON:0011582 ! paired limb/fin skeleton [Term] id: UBERON:0004377 name: distal metaphysis namespace: uberon def: "A metaphysis that is in the distal side of a diaphysis." [OBOL:automatic] synonym: "distal diaphyseal end of long bone" EXACT [FMA:32824] xref: FMA:32824 is_a: UBERON:0001438 ! metaphysis [Term] id: UBERON:0004378 name: proximal metaphysis namespace: uberon def: "A metaphysis that is in the proximal side of a diaphysis." [OBOL:automatic] synonym: "proximal diaphyseal end of long bone" EXACT [FMA:32823] xref: FMA:32823 is_a: UBERON:0001438 ! metaphysis [Term] id: UBERON:0004379 name: distal epiphysis namespace: uberon def: "An epiphysis that is on the distal side of the bone." [http://orcid.org/0000-0002-6601-2165] synonym: "distal end of long bone" EXACT [FMA:32822] xref: FMA:32822 xref: SCTID:279999006 is_a: UBERON:0001437 ! epiphysis [Term] id: UBERON:0004380 name: proximal epiphysis namespace: uberon def: "An epiphysis that is on the proximal side of the bone." [http://orcid.org/0000-0002-6601-2165] synonym: "proximal end of long bone" EXACT [FMA:32821] xref: FMA:32821 xref: SCTID:279998003 is_a: UBERON:0001437 ! epiphysis [Term] id: UBERON:0004381 name: skeleton of limb namespace: uberon def: "The collection of all skeletal elements in an individual limb." [https://orcid.org/0000-0002-6601-2165] synonym: "free limb skeleton" EXACT [VSAO:0000300] synonym: "limb skeleton" EXACT [EHDAA2:0002221] synonym: "set of bones of limb" EXACT [] xref: EHDAA2:0002221 xref: EMAPA:32702 xref: VSAO:0000300 is_a: UBERON:0010712 ! limb skeleton subdivision is_a: UBERON:0011582 ! paired limb/fin skeleton property_value: UBPROP:0000001 "Skeletal subdivision that is part of the limb.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000300", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070"} property_value: UBPROP:0000012 "EHDAA2 considers hip and shoulder joints part of limb skeleton." xsd:string {external_ontology="EHDAA2"} [Term] id: UBERON:0004382 name: epiphysis of humerus namespace: uberon def: "An epiphysis that is part of a humerus [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "humeral epiphysis" EXACT [OBOL:automatic] xref: FMA:32825 xref: SCTID:313054009 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0004383 name: epiphysis of tibia namespace: uberon def: "An epiphysis that is part of a tibia [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "tibial epiphysis" EXACT [FMA:33112] xref: EMAPA:37771 {source="MA:th"} xref: FMA:33112 xref: MA:0003113 xref: SCTID:314626006 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0000979 ! tibia [Term] id: UBERON:0004384 name: epiphysis of femur namespace: uberon def: "An epiphysis that is part of a femur [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "femoral epiphysis" EXACT [FMA:32838] xref: EMAPA:37539 {source="MA:th"} xref: FMA:32838 xref: MA:0003056 xref: SCTID:314625005 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:0004385 name: epiphysis of radius namespace: uberon def: "An epiphysis that is part of a radius [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "radial epiphysis" EXACT [FMA:33770] xref: FMA:33770 xref: SCTID:313055005 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:0004386 name: epiphysis of ulna namespace: uberon def: "An epiphysis that is part of an ulna [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "ulnar epiphysis" EXACT [FMA:33748] xref: FMA:33748 xref: SCTID:313056006 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:0004387 name: epiphysis of phalanx of manus namespace: uberon def: "An epiphysis that is part of a phalanx of a manus [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "epiphysis of phalanx of finger" EXACT [] synonym: "epiphysis of phalanx of hand" RELATED [FMA:240707] xref: FMA:240707 xref: SCTID:314620000 is_a: UBERON:0004446 ! epiphysis of phalanx relationship: part_of UBERON:0001436 ! phalanx of manus [Term] id: UBERON:0004388 name: epiphysis of fibula namespace: uberon def: "An epiphysis that is part of a fibula [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "fibula epiphysis" EXACT [FMA:33726] xref: FMA:33726 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0001446 ! fibula [Term] id: UBERON:0004389 name: epiphysis of metatarsal bone namespace: uberon def: "An epiphysis that is part of a metatarsal bone [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "epiphysis of metatarsal" EXACT [] synonym: "metatarsal bone epiphysis" EXACT [FMA:33814] synonym: "metatarsal epiphysis" EXACT [] xref: FMA:33814 xref: SCTID:313057002 is_a: UBERON:0011973 ! epiphysis of phalanx of pes relationship: part_of UBERON:0001448 ! metatarsal bone [Term] id: UBERON:0004390 name: epiphysis of metacarpal bone namespace: uberon def: "An epiphysis that is part of a metacarpal bone [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "epiphysis of metacarpal" EXACT [] synonym: "metacarpal bone epiphysis" EXACT [FMA:33792] synonym: "metacarpal epiphysis" EXACT [] xref: FMA:33792 xref: SCTID:314907001 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0002374 ! metacarpal bone [Term] id: UBERON:0004391 name: epiphysis of first metacarpal bone namespace: uberon def: "An epiphysis that is part of a metacarpal bone of digit 1 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "first metacarpal bone epiphysis" EXACT [FMA:33793] synonym: "metacarpal 1 epiphysis" EXACT [] xref: FMA:33793 is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0003645 ! metacarpal bone of digit 1 [Term] id: UBERON:0004392 name: epiphysis of second metacarpal bone namespace: uberon def: "An epiphysis that is part of a metacarpal bone of digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "metacarpal 2 epiphysis" EXACT [] synonym: "second metacarpal bone epiphysis" EXACT [FMA:33794] xref: FMA:33794 is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0003646 ! metacarpal bone of digit 2 [Term] id: UBERON:0004393 name: epiphysis of third metacarpal bone namespace: uberon def: "An epiphysis that is part of a metacarpal bone of digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "metacarpal 3 epiphysis" EXACT [] synonym: "third metacarpal bone epiphysis" EXACT [FMA:86328] xref: FMA:86328 is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0003647 ! metacarpal bone of digit 3 [Term] id: UBERON:0004394 name: epiphysis of fourth metacarpal bone namespace: uberon def: "An epiphysis that is part of a metacarpal bone of digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "fourth metacarpal bone epiphysis" EXACT [FMA:86329] synonym: "metacarpal 4 epiphysis" EXACT [] xref: FMA:86329 is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0003648 ! metacarpal bone of digit 4 [Term] id: UBERON:0004395 name: epiphysis of first metatarsal bone namespace: uberon def: "An epiphysis that is part of a metatarsal bone of digit 1 [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "first metatarsal bone epiphysis" EXACT [FMA:33815] synonym: "metatarsal 1 epiphysis" EXACT [] xref: FMA:33815 is_a: UBERON:0004389 ! epiphysis of metatarsal bone relationship: part_of UBERON:0003650 ! metatarsal bone of digit 1 [Term] id: UBERON:0004396 name: epiphysis of second metatarsal bone namespace: uberon def: "An epiphysis that is part of a metatarsal bone of digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "metatarsal 2 epiphysis" EXACT [] synonym: "second metatarsal bone epiphysis" EXACT [FMA:33816] xref: FMA:33816 is_a: UBERON:0004389 ! epiphysis of metatarsal bone relationship: part_of UBERON:0003651 ! metatarsal bone of digit 2 [Term] id: UBERON:0004397 name: epiphysis of third metatarsal bone namespace: uberon def: "An epiphysis that is part of a metatarsal bone of digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "metatarsal 3 epiphysis" EXACT [] synonym: "third metatarsal bone epiphysis" EXACT [FMA:86313] xref: FMA:86313 is_a: UBERON:0004389 ! epiphysis of metatarsal bone relationship: part_of UBERON:0003652 ! metatarsal bone of digit 3 [Term] id: UBERON:0004398 name: epiphysis of fourth metatarsal bone namespace: uberon def: "An epiphysis that is part of a metatarsal bone of digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "fourth metatarsal bone epiphysis" EXACT [FMA:86314] synonym: "metatarsal 4 epiphysis" EXACT [] xref: FMA:86314 is_a: UBERON:0004389 ! epiphysis of metatarsal bone relationship: part_of UBERON:0003653 ! metatarsal bone of digit 4 [Term] id: UBERON:0004399 name: epiphysis of fifth metatarsal bone namespace: uberon def: "An epiphysis that is part of a metatarsal bone of digit 5 [Automatically generated definition]." [OBOL:automatic] synonym: "fifth metatarsal bone epiphysis" EXACT [FMA:86315] synonym: "metatarsal 5 epiphysis" EXACT [] xref: FMA:86315 is_a: UBERON:0004389 ! epiphysis of metatarsal bone relationship: part_of UBERON:0003654 ! metatarsal bone of digit 5 [Term] id: UBERON:0004400 name: bone tissue of epiphysis namespace: uberon def: "A portion of bone tissue that is part of a epiphysis [Automatically generated definition]." [OBOL:automatic] xref: FMA:241364 is_a: UBERON:0005808 ! bone tissue of long bone relationship: part_of UBERON:0001437 ! epiphysis [Term] id: UBERON:0004401 name: bone tissue of distal epiphysis namespace: uberon def: "A portion of bone tissue that is part of a distal epiphysis [Automatically generated definition]." [OBOL:automatic] xref: FMA:241374 is_a: UBERON:0004400 ! bone tissue of epiphysis relationship: part_of UBERON:0004379 ! distal epiphysis [Term] id: UBERON:0004402 name: bone tissue of proximal epiphysis namespace: uberon def: "A portion of bone tissue that is part of a proximal epiphysis [Automatically generated definition]." [OBOL:automatic] xref: FMA:241372 is_a: UBERON:0004400 ! bone tissue of epiphysis relationship: part_of UBERON:0004380 ! proximal epiphysis [Term] id: UBERON:0004403 name: periosteum of epiphysis namespace: uberon def: "A periosteum that is part of a epiphysis [Automatically generated definition]." [OBOL:automatic] synonym: "epiphysis periosteum" EXACT [FMA:32687] xref: FMA:32687 is_a: UBERON:0016896 ! periosteum of long bone relationship: part_of UBERON:0001437 ! epiphysis [Term] id: UBERON:0004404 name: distal epiphysis of humerus namespace: uberon def: "A distal epiphysis that is part of a humerus [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "distal end of humerus" EXACT [FMA:32826] synonym: "lower end of humerus" EXACT [FMA:32826] xref: FMA:32826 xref: SCTID:310655007 is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004382 ! epiphysis of humerus relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0004405 name: distal epiphysis of tibia namespace: uberon def: "A distal epiphysis that is part of a tibia [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "distal end of tibia" EXACT [FMA:33116] synonym: "lower end of tibia" EXACT [FMA:33116] xref: FMA:33116 xref: SCTID:302527001 xref: Wikipedia:Lower_extremity_of_tibia is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004383 ! epiphysis of tibia relationship: part_of UBERON:0000979 ! tibia [Term] id: UBERON:0004406 name: distal epiphysis of femur namespace: uberon def: "A distal epiphysis that is part of a femur [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "distal femoral epiphysis" EXACT [https://orcid.org/0000-0002-6601-2165, OBOL:automatic] synonym: "distal head of femur" RELATED [AAO:0000893] xref: AAO:0000893 xref: FMA:32844 xref: SCTID:280016000 is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004384 ! epiphysis of femur relationship: part_of UBERON:0000981 ! femur property_value: UBPROP:0000001 "Head of the femur that articulates with the tibia and fibula.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000893", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0004407 name: distal epiphysis of radius namespace: uberon def: "A distal epiphysis that is part of a radius [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "distal end of radius" EXACT [FMA:33776] synonym: "lower end of radius" EXACT [FMA:33776] xref: FMA:33776 xref: SCTID:280013008 xref: Wikipedia:Lower_extremity_of_radius is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004385 ! epiphysis of radius relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:0004408 name: distal epiphysis of ulna namespace: uberon def: "A distal epiphysis that is part of a ulna [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "distal end of ulna" EXACT [FMA:33754] synonym: "lower end of ulna" EXACT [FMA:33754] xref: FMA:33754 xref: SCTID:302521000 is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004386 ! epiphysis of ulna relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:0004409 name: distal epiphysis of phalanx of manus namespace: uberon def: "A distal epiphysis that is part of a phalanx of manus [Automatically generated definition]." [OBOL:automatic] synonym: "distal end of phalanx of hand" RELATED [FMA:226577] synonym: "distal epiphysis of phalanx of finger" EXACT [] synonym: "distal epiphysis of phalanx of hand" RELATED [FMA:226577] synonym: "head of phalanx of finger" RELATED [FMA:226577] synonym: "head of phalanx of hand" RELATED [FMA:226577] synonym: "ungual tuberosity of distal phalanx of finger" RELATED [FMA:226577] xref: FMA:226577 xref: SCTID:272707006 is_a: UBERON:0004387 ! epiphysis of phalanx of manus is_a: UBERON:0004448 ! distal epiphysis of phalanx relationship: part_of UBERON:0001436 ! phalanx of manus [Term] id: UBERON:0004410 name: distal epiphysis of fibula namespace: uberon def: "A distal epiphysis that is part of a fibula [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "distal end of fibula" EXACT [FMA:33732] synonym: "lower end of fibula" EXACT [FMA:33732] xref: FMA:33732 xref: SCTID:129111008 xref: SCTID:280018004 is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004388 ! epiphysis of fibula relationship: part_of UBERON:0001446 ! fibula [Term] id: UBERON:0004411 name: proximal epiphysis of humerus namespace: uberon def: "The upper extremity of the humerus (proximal humerus) consists of a large rounded head joined to the body by a constricted portion called the neck, and two eminences, the greater and lesser tubercles." [Wikipedia:Upper_extremity_of_humerus] subset: pheno_slim synonym: "head of the humerus" RELATED [Wikipedia:Upper_extremity_of_humerus] synonym: "humeral head" RELATED [Wikipedia:Upper_extremity_of_humerus] synonym: "proximal end of humerus" EXACT [FMA:23362] synonym: "proximal humeral epiphysis" EXACT [https://orcid.org/0000-0002-6601-2165, OBOL:automatic] synonym: "proximal humerus" RELATED [Wikipedia:Upper_extremity_of_humerus] synonym: "upper end of humerus" EXACT [FMA:23362] synonym: "upper extremity of humerus" RELATED [Wikipedia:Upper_extremity_of_humerus] xref: FMA:23362 xref: SCTID:280028008 xref: Wikipedia:Upper_extremity_of_humerus is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004382 ! epiphysis of humerus relationship: part_of UBERON:0000976 ! humerus property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/ad/Gray207.png" xsd:anyURI [Term] id: UBERON:0004412 name: proximal epiphysis of femur namespace: uberon def: "A proximal epiphysis that is part of a femur [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "capital femoral epiphysis" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "proximal femoral epiphysis" EXACT [https://orcid.org/0000-0002-6601-2165, OBOL:automatic] xref: FMA:32841 xref: SCTID:244702009 is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004384 ! epiphysis of femur relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:0004413 name: proximal epiphysis of radius namespace: uberon def: "A proximal epiphysis that is part of a radius [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim synonym: "proximal end of radius" EXACT [FMA:39780] synonym: "proximal radial epiphysis" EXACT [https://orcid.org/0000-0002-6601-2165, OBOL:automatic] synonym: "upper end of radius" EXACT [FMA:39780] xref: FMA:39780 xref: SCTID:280029000 xref: Wikipedia:Upper_extremity_of_radius is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004385 ! epiphysis of radius relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:0004414 name: proximal epiphysis of phalanx of manus namespace: uberon def: "A proximal epiphysis that is part of a phalanx of manus [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of phalanx of finger" EXACT [FMA:226482] synonym: "base of phalanx of finger" EXACT [FMA:226482] synonym: "basis phalangis manus" EXACT OMO:0003011 [FMA:226482, FMA:TA] synonym: "proximal epiphysis of phalanx of finger" EXACT [] synonym: "proximal epiphysis of phalanx of hand" RELATED [FMA:226482] xref: FMA:226482 xref: SCTID:272704004 is_a: UBERON:0004387 ! epiphysis of phalanx of manus is_a: UBERON:0004447 ! proximal epiphysis of phalanx relationship: part_of UBERON:0001436 ! phalanx of manus [Term] id: UBERON:0004415 name: proximal epiphysis of metatarsal bone namespace: uberon def: "A proximal epiphysis that is part of a metatarsal bone [Automatically generated definition]." [OBOL:automatic] synonym: "base of metatarsal bone" EXACT [FMA:33817] synonym: "basis ossis metatarsi" EXACT OMO:0003011 [FMA:33817, FMA:TA] synonym: "proximal end of metatarsal bone" EXACT [FMA:33817] synonym: "upper end of metatarsal bone" EXACT [FMA:33817] xref: FMA:33817 xref: SCTID:119545008 is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004389 ! epiphysis of metatarsal bone relationship: part_of UBERON:0001448 ! metatarsal bone [Term] id: UBERON:0004416 name: proximal epiphysis of metacarpal bone namespace: uberon def: "A proximal epiphysis that is part of a metacarpal bone [Automatically generated definition]." [OBOL:automatic] synonym: "base of metacarpal bone" EXACT [FMA:33795] synonym: "basis ossis metacarpi" EXACT OMO:0003011 [FMA:33795, FMA:TA] synonym: "metacarpal bone base" EXACT [FMA:33795] synonym: "proximal end of metacarpal bone" EXACT [FMA:33795] synonym: "upper end of metacarpal bone" EXACT [FMA:33795] xref: FMA:33795 xref: SCTID:272695001 is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0002374 ! metacarpal bone [Term] id: UBERON:0004417 name: proximal epiphysis of phalanx of manual digit 1 namespace: uberon def: "A proximal epiphysis that is part of a manual digit 1 phalanx [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of phalanx of thumb" EXACT [FMA:37489] synonym: "base of phalanx of first digit of hand" EXACT [FMA:37489] synonym: "base of phalanx of thumb" EXACT [FMA:37489] synonym: "proximal epiphysis of phalanx of manual digit 1" EXACT [] synonym: "proximal epiphysis of phalanx of manual digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of phalanx of thumb" NARROW SENSU [FMA:37489, NCBITaxon:9606] xref: FMA:37489 xref: SCTID:272700008 is_a: UBERON:0004414 ! proximal epiphysis of phalanx of manus relationship: part_of UBERON:0003620 ! manual digit 1 phalanx [Term] id: UBERON:0004418 name: proximal epiphysis of phalanx of manual digit 2 namespace: uberon def: "A proximal epiphysis that is part of a manual digit 2 phalanx [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of phalanx of index finger" EXACT [FMA:37498] synonym: "base of phalanx of index finger" EXACT [FMA:37498] synonym: "base of phalanx of second digit of hand" EXACT [FMA:37498] synonym: "base of phalanx of second finger" EXACT [FMA:37498] synonym: "proximal epiphysis of phalanx of index finger" NARROW SENSU [FMA:37498, NCBITaxon:9606] synonym: "proximal epiphysis of phalanx of manual digit 2" EXACT [] synonym: "proximal epiphysis of phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37498 xref: SCTID:368307004 is_a: UBERON:0004414 ! proximal epiphysis of phalanx of manus relationship: part_of UBERON:0003636 ! manual digit 2 phalanx [Term] id: UBERON:0004419 name: proximal epiphysis of phalanx of manual digit 3 namespace: uberon def: "A proximal epiphysis that is part of a manual digit 3 phalanx [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of phalanx of middle finger" EXACT [FMA:37510] synonym: "base of phalanx of middle finger" EXACT [FMA:37510] synonym: "base of phalanx of third digit of hand" EXACT [FMA:37510] synonym: "base of phalanx of third finger" EXACT [FMA:37510] synonym: "proximal epiphysis of phalanx of manual digit 3" EXACT [] synonym: "proximal epiphysis of phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of phalanx of middle finger" NARROW SENSU [FMA:37510, NCBITaxon:9606] xref: FMA:37510 xref: SCTID:181997000 is_a: UBERON:0004414 ! proximal epiphysis of phalanx of manus relationship: part_of UBERON:0003637 ! manual digit 3 phalanx [Term] id: UBERON:0004420 name: proximal epiphysis of phalanx of manual digit 4 namespace: uberon def: "A proximal epiphysis that is part of a manual digit 4 phalanx [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of phalanx of ring finger" EXACT [FMA:37522] synonym: "base of phalanx of fourth digit of hand" EXACT [FMA:37522] synonym: "base of phalanx of fourth finger" EXACT [FMA:37522] synonym: "base of phalanx of ring finger" EXACT [FMA:37522] synonym: "proximal epiphysis of phalanx of manual digit 4" EXACT [] synonym: "proximal epiphysis of phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of phalanx of ring finger" NARROW SENSU [FMA:37522, NCBITaxon:9606] xref: FMA:37522 xref: SCTID:368337008 is_a: UBERON:0004414 ! proximal epiphysis of phalanx of manus relationship: part_of UBERON:0003638 ! manual digit 4 phalanx [Term] id: UBERON:0004421 name: proximal epiphysis of phalanx of manual digit 5 namespace: uberon def: "A proximal epiphysis that is part of a manual digit 5 phalanx [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of phalanx of fifth finger" EXACT [FMA:37534] synonym: "basal epiphysis of phalanx of little finger" EXACT [FMA:37534] synonym: "base of phalanx of fifth digit of hand" EXACT [FMA:37534] synonym: "base of phalanx of fifth finger" EXACT [FMA:37534] synonym: "base of phalanx of little finger" EXACT [FMA:37534] synonym: "proximal epiphysis of phalanx of little finger" NARROW SENSU [FMA:37534, NCBITaxon:9606] synonym: "proximal epiphysis of phalanx of manual digit 5" EXACT [] synonym: "proximal epiphysis of phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37534 xref: SCTID:368351008 is_a: UBERON:0004414 ! proximal epiphysis of phalanx of manus relationship: part_of UBERON:0003639 ! manual digit 5 phalanx [Term] id: UBERON:0004422 name: proximal epiphysis of first metacarpal bone namespace: uberon def: "A proximal epiphysis that is part of a metacarpal bone of digit 1 [Automatically generated definition]." [OBOL:automatic] synonym: "base of first metacarpal bone" EXACT [FMA:42788] synonym: "first metacarpal bone base" EXACT [FMA:42788] synonym: "proximal epiphysis of metacarpal 1" EXACT [] xref: FMA:42788 xref: SCTID:181978000 is_a: UBERON:0004391 ! epiphysis of first metacarpal bone is_a: UBERON:0004416 ! proximal epiphysis of metacarpal bone relationship: part_of UBERON:0003645 ! metacarpal bone of digit 1 [Term] id: UBERON:0004423 name: proximal epiphysis of second metacarpal bone namespace: uberon def: "A proximal epiphysis that is part of a metacarpal bone of digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "base of second metacarpal bone" EXACT [FMA:42791] synonym: "proximal end of second metacarpal bone" EXACT [FMA:42791] synonym: "proximal epiphysis of metacarpal 2" EXACT [] synonym: "second metacarpal bone base" EXACT [FMA:42791] xref: FMA:42791 xref: SCTID:263461004 is_a: UBERON:0004392 ! epiphysis of second metacarpal bone is_a: UBERON:0004416 ! proximal epiphysis of metacarpal bone relationship: part_of UBERON:0003646 ! metacarpal bone of digit 2 [Term] id: UBERON:0004424 name: proximal epiphysis of third metacarpal bone namespace: uberon def: "A proximal epiphysis that is part of a metacarpal bone of digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "base of third metacarpal bone" EXACT [FMA:42794] synonym: "proximal end of third metacarpal bone" EXACT [FMA:42794] synonym: "proximal epiphysis of metacarpal 3" EXACT [] synonym: "third metacarpal bone base" EXACT [FMA:42794] xref: FMA:42794 xref: SCTID:263465008 is_a: UBERON:0004393 ! epiphysis of third metacarpal bone is_a: UBERON:0004416 ! proximal epiphysis of metacarpal bone relationship: part_of UBERON:0003647 ! metacarpal bone of digit 3 [Term] id: UBERON:0004425 name: proximal epiphysis of fourth metacarpal bone namespace: uberon def: "A proximal epiphysis that is part of a metacarpal bone of digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "base of fourth metacarpal bone" EXACT [FMA:42797] synonym: "fourth metacarpal bone base" EXACT [FMA:42797] synonym: "proximal end of fourth metacarpal bone" EXACT [FMA:42797] synonym: "proximal epiphysis of metacarpal 4" EXACT [] xref: FMA:42797 xref: SCTID:263469002 is_a: UBERON:0004394 ! epiphysis of fourth metacarpal bone is_a: UBERON:0004416 ! proximal epiphysis of metacarpal bone relationship: part_of UBERON:0003648 ! metacarpal bone of digit 4 [Term] id: UBERON:0004426 name: proximal epiphysis of fifth metacarpal bone namespace: uberon def: "A proximal epiphysis that is part of a metacarpal bone of digit 5 [Automatically generated definition]." [OBOL:automatic] synonym: "base of fifth metacarpal bone" EXACT [FMA:42800] synonym: "fifth metacarpal bone base" EXACT [FMA:42800] synonym: "proximal end of fifth metacarpal bone" EXACT [FMA:42800] synonym: "proximal epiphysis of metacarpal 5" EXACT [] xref: FMA:42800 xref: SCTID:263473004 is_a: UBERON:0004416 ! proximal epiphysis of metacarpal bone is_a: UBERON:0011104 ! epiphysis of fifth metacarpal bone relationship: part_of UBERON:0003649 ! metacarpal bone of digit 5 [Term] id: UBERON:0004427 name: proximal epiphysis of first metatarsal bone namespace: uberon def: "A proximal epiphysis that is part of a metatarsal bone of digit 1 [Automatically generated definition]." [OBOL:automatic] synonym: "base of first metatarsal bone" EXACT [FMA:42963] synonym: "proximal end of first metatarsal bone" EXACT [FMA:42963] synonym: "proximal epiphysis of metatarsal 1" EXACT [] xref: FMA:42963 xref: SCTID:182124002 is_a: UBERON:0004395 ! epiphysis of first metatarsal bone is_a: UBERON:0004415 ! proximal epiphysis of metatarsal bone relationship: part_of UBERON:0003650 ! metatarsal bone of digit 1 [Term] id: UBERON:0004428 name: proximal epiphysis of second metatarsal bone namespace: uberon def: "A proximal epiphysis that is part of a metatarsal bone of digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "base of second metatarsal bone" EXACT [FMA:42964] synonym: "proximal end of second metatarsal bone" EXACT [FMA:42964] synonym: "proximal epiphysis of metatarsal 2" EXACT [] xref: FMA:42964 xref: SCTID:182130002 is_a: UBERON:0004396 ! epiphysis of second metatarsal bone is_a: UBERON:0004415 ! proximal epiphysis of metatarsal bone relationship: part_of UBERON:0003651 ! metatarsal bone of digit 2 [Term] id: UBERON:0004429 name: proximal epiphysis of third metatarsal bone namespace: uberon def: "A proximal epiphysis that is part of a metatarsal bone of digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "base of third metatarsal bone" EXACT [FMA:42965] synonym: "proximal end of third metatarsal bone" EXACT [FMA:42965] synonym: "proximal epiphysis of metatarsal 3" EXACT [] xref: FMA:42965 xref: SCTID:182135007 is_a: UBERON:0004397 ! epiphysis of third metatarsal bone is_a: UBERON:0004415 ! proximal epiphysis of metatarsal bone relationship: part_of UBERON:0003652 ! metatarsal bone of digit 3 [Term] id: UBERON:0004430 name: proximal epiphysis of fourth metatarsal bone namespace: uberon def: "A proximal epiphysis that is part of a metatarsal bone of digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "base of fourth metatarsal bone" EXACT [FMA:42966] synonym: "proximal end of fourth metatarsal bone" EXACT [FMA:42966] synonym: "proximal epiphysis of metatarsal 4" EXACT [] xref: FMA:42966 xref: SCTID:182140004 is_a: UBERON:0004398 ! epiphysis of fourth metatarsal bone is_a: UBERON:0004415 ! proximal epiphysis of metatarsal bone relationship: part_of UBERON:0003653 ! metatarsal bone of digit 4 [Term] id: UBERON:0004431 name: proximal epiphysis of fifth metatarsal bone namespace: uberon def: "A proximal epiphysis that is part of a metatarsal bone of digit 5 [Automatically generated definition]." [OBOL:automatic] synonym: "base of fifth metatarsal bone" EXACT [FMA:42967] synonym: "proximal end of fifth metatarsal bone" EXACT [FMA:42967] synonym: "proximal epiphysis of metatarsal 5" EXACT [] xref: FMA:42967 xref: SCTID:182145009 is_a: UBERON:0004399 ! epiphysis of fifth metatarsal bone is_a: UBERON:0004415 ! proximal epiphysis of metatarsal bone relationship: part_of UBERON:0003654 ! metatarsal bone of digit 5 [Term] id: UBERON:0004432 name: proximal epiphysis of distal phalanx of manual digit 2 namespace: uberon def: "A proximal epiphysis that is part of a distal phalanx of manual digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of distal phalanx of index finger" EXACT [FMA:37505] synonym: "base of distal phalanx of index finger" EXACT [FMA:37505] synonym: "base of distal phalanx of second digit of hand" EXACT [FMA:37505] synonym: "base of distal phalanx of second finger" EXACT [FMA:37505] synonym: "proximal epiphysis of distal phalanx of index finger" NARROW SENSU [FMA:37505, NCBITaxon:9606] synonym: "proximal epiphysis of distal phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37505 xref: SCTID:263445001 is_a: UBERON:0004418 ! proximal epiphysis of phalanx of manual digit 2 is_a: UBERON:0011979 ! epiphysis of distal phalanx of manus relationship: part_of UBERON:0004311 ! distal phalanx of manual digit 2 [Term] id: UBERON:0004433 name: proximal epiphysis of distal phalanx of manual digit 3 namespace: uberon def: "A proximal epiphysis that is part of a distal phalanx of manual digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "base of distal phalanx of middle finger" EXACT [FMA:37517] synonym: "base of distal phalanx of third digit of hand" EXACT [FMA:37517] synonym: "base of distal phalanx of third finger" EXACT [FMA:37517] synonym: "proximal epiphysis of distal phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of distal phalanx of middle finger" NARROW SENSU [FMA:37517, NCBITaxon:9606] xref: FMA:37517 xref: SCTID:263446000 is_a: UBERON:0004419 ! proximal epiphysis of phalanx of manual digit 3 is_a: UBERON:0011979 ! epiphysis of distal phalanx of manus relationship: part_of UBERON:0004312 ! distal phalanx of manual digit 3 [Term] id: UBERON:0004434 name: proximal epiphysis of distal phalanx of manual digit 4 namespace: uberon def: "A proximal epiphysis that is part of a distal phalanx of manual digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of distal phalanx of fourth finger" EXACT [FMA:37529] synonym: "basal epiphysis of distal phalanx of ring finger" EXACT [FMA:37529] synonym: "base of distal phalanx of fourth digit of hand" EXACT [FMA:37529] synonym: "base of distal phalanx of fourth finger" EXACT [FMA:37529] synonym: "base of distal phalanx of ring finger" EXACT [FMA:37529] synonym: "proximal epiphysis of distal phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of distal phalanx of ring finger" NARROW SENSU [FMA:37529, NCBITaxon:9606] xref: FMA:37529 xref: SCTID:263447009 is_a: UBERON:0004420 ! proximal epiphysis of phalanx of manual digit 4 is_a: UBERON:0011979 ! epiphysis of distal phalanx of manus relationship: part_of UBERON:0004313 ! distal phalanx of manual digit 4 [Term] id: UBERON:0004435 name: proximal epiphysis of distal phalanx of manual digit 5 namespace: uberon def: "A proximal epiphysis that is part of a distal phalanx of manual digit 5 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of distal phalanx of fifth finger" EXACT [FMA:37541] synonym: "basal epiphysis of distal phalanx of little finger" EXACT [FMA:37541] synonym: "base of distal phalanx of fifth digit of hand" EXACT [FMA:37541] synonym: "base of distal phalanx of fifth finger" EXACT [FMA:37541] synonym: "base of distal phalanx of little finger" EXACT [FMA:37541] synonym: "proximal epiphysis of distal phalanx of little finger" NARROW SENSU [FMA:37541, NCBITaxon:9606] synonym: "proximal epiphysis of distal phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37541 xref: SCTID:263448004 is_a: UBERON:0004421 ! proximal epiphysis of phalanx of manual digit 5 is_a: UBERON:0011979 ! epiphysis of distal phalanx of manus relationship: part_of UBERON:0004314 ! distal phalanx of manual digit 5 [Term] id: UBERON:0004436 name: proximal epiphysis of middle phalanx of manual digit 2 namespace: uberon def: "A proximal epiphysis that is part of a middle phalanx of manual digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of middle phalanx of index finger" EXACT [FMA:37502] synonym: "base of middle phalanx of index finger" EXACT [FMA:37502] synonym: "base of middle phalanx of second digit of hand" EXACT [FMA:37502] synonym: "base of middle phalanx of second finger" EXACT [FMA:37502] synonym: "proximal epiphysis of middle phalanx of index finger" NARROW SENSU [FMA:37502, NCBITaxon:9606] synonym: "proximal epiphysis of middle phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37502 xref: SCTID:263428006 is_a: UBERON:0004418 ! proximal epiphysis of phalanx of manual digit 2 is_a: UBERON:0011978 ! epiphysis of middle phalanx of manus relationship: part_of UBERON:0004320 ! middle phalanx of manual digit 2 [Term] id: UBERON:0004437 name: proximal epiphysis of middle phalanx of manual digit 3 namespace: uberon def: "A proximal epiphysis that is part of a middle phalanx of manual digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of middle phalanx of middle finger" EXACT [FMA:37514] synonym: "base of middle phalanx of middle finger" EXACT [FMA:37514] synonym: "base of middle phalanx of third digit of hand" EXACT [FMA:37514] synonym: "base of middle phalanx of third finger" EXACT [FMA:37514] synonym: "proximal epiphysis of middle phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of middle phalanx of middle finger" NARROW SENSU [FMA:37514, NCBITaxon:9606] xref: FMA:37514 xref: SCTID:263429003 is_a: UBERON:0004419 ! proximal epiphysis of phalanx of manual digit 3 is_a: UBERON:0011978 ! epiphysis of middle phalanx of manus relationship: part_of UBERON:0004321 ! middle phalanx of manual digit 3 [Term] id: UBERON:0004438 name: proximal epiphysis of middle phalanx of manual digit 4 namespace: uberon def: "A proximal epiphysis that is part of a middle phalanx of manual digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of middle phalanx of fourth finger" EXACT [FMA:37526] synonym: "basal epiphysis of middle phalanx of ring finger" EXACT [FMA:37526] synonym: "base of middle phalanx of fourth digit of hand" EXACT [FMA:37526] synonym: "base of middle phalanx of fourth finger" EXACT [FMA:37526] synonym: "base of middle phalanx of ring finger" EXACT [FMA:37526] synonym: "proximal epiphysis of middle phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of middle phalanx of ring finger" NARROW SENSU [FMA:37526, NCBITaxon:9606] xref: FMA:37526 xref: SCTID:263430008 is_a: UBERON:0004420 ! proximal epiphysis of phalanx of manual digit 4 is_a: UBERON:0011978 ! epiphysis of middle phalanx of manus relationship: part_of UBERON:0004322 ! middle phalanx of manual digit 4 [Term] id: UBERON:0004439 name: proximal epiphysis of middle phalanx of manual digit 5 namespace: uberon def: "A proximal epiphysis that is part of a middle phalanx of manual digit 5 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of middle phalanx of fifth finger" EXACT [FMA:37538] synonym: "basal epiphysis of middle phalanx of little finger" EXACT [FMA:37538] synonym: "base of middle phalanx of fifth digit of hand" EXACT [FMA:37538] synonym: "base of middle phalanx of fifth finger" EXACT [FMA:37538] synonym: "base of middle phalanx of little finger" EXACT [FMA:37538] synonym: "proximal epiphysis of middle phalanx of little finger" NARROW SENSU [FMA:37538, NCBITaxon:9606] synonym: "proximal epiphysis of middle phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37538 xref: SCTID:263431007 is_a: UBERON:0004421 ! proximal epiphysis of phalanx of manual digit 5 is_a: UBERON:0011978 ! epiphysis of middle phalanx of manus relationship: part_of UBERON:0004323 ! middle phalanx of manual digit 5 [Term] id: UBERON:0004440 name: proximal epiphysis of proximal phalanx of manual digit 2 namespace: uberon def: "A proximal epiphysis that is part of a proximal phalanx of manual digit 2 [Automatically generated definition]." [OBOL:automatic] synonym: "base of proximal phalanx of index finger" EXACT [FMA:37499] synonym: "base of proximal phalanx of second digit of hand" EXACT [FMA:37499] synonym: "base of proximal phalanx of second finger" EXACT [FMA:37499] synonym: "proximal epiphysis of proximal phalanx of index finger" NARROW SENSU [FMA:37499, NCBITaxon:9606] synonym: "proximal epiphysis of proximal phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37499 xref: SCTID:263412001 is_a: UBERON:0004418 ! proximal epiphysis of phalanx of manual digit 2 is_a: UBERON:0011977 ! epiphysis of proximal phalanx of manus relationship: part_of UBERON:0004328 ! proximal phalanx of manual digit 2 [Term] id: UBERON:0004441 name: proximal epiphysis of proximal phalanx of manual digit 3 namespace: uberon def: "A proximal epiphysis that is part of a proximal phalanx of manual digit 3 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of proximal phalanx of middle finger" EXACT [FMA:37511] synonym: "base of proximal phalanx of middle finger" EXACT [FMA:37511] synonym: "base of proximal phalanx of third digit of hand" EXACT [FMA:37511] synonym: "base of proximal phalanx of third finger" EXACT [FMA:37511] synonym: "proximal epiphysis of proximal phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of proximal phalanx of middle finger" NARROW SENSU [FMA:37511, NCBITaxon:9606] xref: FMA:37511 xref: SCTID:263413006 is_a: UBERON:0004419 ! proximal epiphysis of phalanx of manual digit 3 is_a: UBERON:0011977 ! epiphysis of proximal phalanx of manus relationship: part_of UBERON:0004329 ! proximal phalanx of manual digit 3 [Term] id: UBERON:0004442 name: proximal epiphysis of proximal phalanx of manual digit 4 namespace: uberon def: "A proximal epiphysis that is part of a proximal phalanx of manual digit 4 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of proximal phalanx of fourth finger" EXACT [FMA:37523] synonym: "basal epiphysis of proximal phalanx of ring finger" EXACT [FMA:37523] synonym: "base of proximal phalanx of fourth digit of hand" EXACT [FMA:37523] synonym: "base of proximal phalanx of fourth finger" EXACT [FMA:37523] synonym: "base of proximal phalanx of ring finger" EXACT [FMA:37523] synonym: "proximal epiphysis of proximal phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of proximal phalanx of ring finger" NARROW SENSU [FMA:37523, NCBITaxon:9606] xref: FMA:37523 xref: SCTID:263414000 is_a: UBERON:0004420 ! proximal epiphysis of phalanx of manual digit 4 is_a: UBERON:0011977 ! epiphysis of proximal phalanx of manus relationship: part_of UBERON:0004330 ! proximal phalanx of manual digit 4 [Term] id: UBERON:0004443 name: proximal epiphysis of proximal phalanx of manual digit 5 namespace: uberon def: "A proximal epiphysis that is part of a proximal phalanx of manual digit 5 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of proximal phalanx of little finger" EXACT [FMA:37535] synonym: "base of proximal phalanx of fifth digit of hand" EXACT [FMA:37535] synonym: "base of proximal phalanx of fifth finger" EXACT [FMA:37535] synonym: "base of proximal phalanx of little finger" EXACT [FMA:37535] synonym: "proximal epiphysis of proximal phalanx of little finger" NARROW SENSU [FMA:37535, NCBITaxon:9606] synonym: "proximal epiphysis of proximal phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: FMA:37535 xref: SCTID:263415004 is_a: UBERON:0004421 ! proximal epiphysis of phalanx of manual digit 5 is_a: UBERON:0011977 ! epiphysis of proximal phalanx of manus relationship: part_of UBERON:0004331 ! proximal phalanx of manual digit 5 [Term] id: UBERON:0004444 name: proximal epiphysis of distal phalanx of manual digit 1 namespace: uberon def: "A proximal epiphysis that is part of a distal phalanx of manual digit 1 [Automatically generated definition]." [OBOL:automatic] synonym: "base of distal phalanx of thumb" EXACT [FMA:37493] synonym: "proximal epiphysis of distal phalanx of manual digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of distal phalanx of thumb" NARROW SENSU [FMA:37493, NCBITaxon:9606] xref: FMA:37493 xref: SCTID:182008001 is_a: UBERON:0004417 ! proximal epiphysis of phalanx of manual digit 1 is_a: UBERON:0011979 ! epiphysis of distal phalanx of manus relationship: part_of UBERON:0004337 ! distal phalanx of manual digit 1 [Term] id: UBERON:0004445 name: proximal epiphysis of proximal phalanx of manual digit 1 namespace: uberon def: "A proximal epiphysis that is part of a proximal phalanx of manual digit 1 [Automatically generated definition]." [OBOL:automatic] synonym: "basal epiphysis of proximal phalanx of thumb" EXACT [FMA:37490] synonym: "base of proximal phalanx of thumb" EXACT [FMA:37490] synonym: "proximal epiphysis of proximal phalanx of manual digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal epiphysis of proximal phalanx of thumb" NARROW SENSU [FMA:37490, NCBITaxon:9606] xref: FMA:37490 xref: SCTID:181993001 is_a: UBERON:0004417 ! proximal epiphysis of phalanx of manual digit 1 is_a: UBERON:0011977 ! epiphysis of proximal phalanx of manus relationship: part_of UBERON:0004338 ! proximal phalanx of manual digit 1 [Term] id: UBERON:0004446 name: epiphysis of phalanx namespace: uberon def: "An epiphysis that is part of a phalanx [Automatically generated definition]." [OBOL:automatic] subset: pheno_slim xref: SCTID:280033007 is_a: UBERON:0001437 ! epiphysis relationship: part_of UBERON:0003221 ! phalanx [Term] id: UBERON:0004447 name: proximal epiphysis of phalanx namespace: uberon def: "A proximal epiphysis that is part of a phalanx [Automatically generated definition]." [OBOL:automatic] is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004446 ! epiphysis of phalanx relationship: part_of UBERON:0003221 ! phalanx [Term] id: UBERON:0004448 name: distal epiphysis of phalanx namespace: uberon def: "A distal epiphysis that is part of a phalanx [Automatically generated definition]." [OBOL:automatic] synonym: "head of phalanx" EXACT [] xref: SCTID:110520001 is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004446 ! epiphysis of phalanx relationship: part_of UBERON:0003221 ! phalanx [Term] id: UBERON:0004651 name: scapula spine namespace: uberon def: "The triangular ridge on the dorsal aspect of the scapula which separates the supra- from the infraspinatous fossa and where the trapezius and deltoid muscles are attached." [ISBN:0-683-40008-8, MP:0004347] subset: pheno_slim synonym: "scapular spine" RELATED [FMA:13453, MA:0002806] synonym: "spina scapulae" RELATED OMO:0003011 [Wikipedia:Spine_of_scapula] synonym: "spine of scapula" EXACT [FMA:13453] xref: EMAPA:25123 xref: FMA:13453 xref: MA:0002806 xref: SCTID:181916005 xref: Wikipedia:Spine_of_scapula relationship: part_of UBERON:0006849 ! scapula property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png" xsd:anyURI property_value: UBPROP:0000003 "homology debated" xsd:string {is_about="UBERON:0004741", source="PMC1352163", status="not_accepted"} property_value: UBPROP:0000003 "the cleithrum, the major shoulder bone of extinct land vertebrate ancestors,.. appears to survive as the scapular spine in living mammals[Matsuoka, PMC1352163]" xsd:string {is_about="UBERON:0004741", source="PMC1352163", status="not_accepted"} [Term] id: UBERON:0004652 name: humerus diaphysis namespace: uberon def: "The body or shaft of the humerus is almost cylindrical in the upper half of its extent, prismatic and flattened below, and has three borders and three surfaces." [Wikipedia:Body_of_humerus] subset: pheno_slim synonym: "body of humerus" EXACT [FMA:13305] synonym: "body of the humerus" RELATED [Wikipedia:Body_of_humerus] synonym: "corpus humeri" EXACT OMO:0003011 [FMA:13305, FMA:TA] synonym: "diaphysis of humerus" EXACT [FMA:13305] synonym: "humeral diaphysis" EXACT [FMA:13305] synonym: "medial humerus" RELATED [Wikipedia:Body_of_humerus] synonym: "shaft of humerus" EXACT [FMA:13305] synonym: "shaft of the humerus" RELATED [Wikipedia:Body_of_humerus] xref: EMAPA:25051 xref: FMA:13305 xref: MA:0002807 xref: NCIT:C120671 xref: SCTID:181927007 xref: Wikipedia:Body_of_humerus is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0004741 name: cleithrum namespace: uberon def: "Dermal bone on the margin of the scapula. The cleithrum is attached to the skull in fishes, but free from the latter in amphibians and disappears early in the evolution of reptiles." [VSAO:0000187, Wikipedia:Cleithrum] subset: efo_slim synonym: "cleithra" EXACT OMO:0003004 [ZFA:0000184] synonym: "cleithrum bone" EXACT OMO:0003004 [] xref: AAO:0000750 xref: EFO:0003507 xref: TAO:0000184 xref: VSAO:0000187 xref: Wikipedia:Cleithrum xref: ZFA:0000184 is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 {source="ZFA"} ! pectoral girdle skeleton property_value: RO:0002161 NCBITaxon:40674 {source="Wikipedia"} property_value: UBPROP:0000001 "Dermal bone that articulates dorsally with the supracleithrum and ventro-medially with the scapula and coracoid and mesocoracoid bone when the last bone is present. With the posttemporal and supracleithrum, the cleithrum supports the primary pectoral girdle. The cleithrum is located immediately behind the branchial cavity.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000184", ontology="TAO", source="TAO:wd"} property_value: UBPROP:0000001 "Paired bones of intramembranous origin. Each cleithrum extends medially from a point near the suprascapular-scapular articulation to invest the anterior margin of the suprascapula, and occasionoally it may extend to the dorsal (medial) surface. Usually, this bone is bifurcate.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000750", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: part_of scapular area (AAO:0000935)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000750", ontology="AAO"} property_value: UBPROP:0000005 "Commonly, the cleithrum is a large, well-ossified bone provided with a dorsal and a ventral arm that form an angle of about 90 or a few more degrees. The dorsal arm may end in a sharp or spine-like process to articulate with the supracleithrum. At the confluence of both arms the bone presents a blade extending postero-ventrally and that may have different development among fishes. The anterior edge of the cleithrum is usually thick and may produce a medial plate of different degrees of development.[TAO]" xsd:string {date_retrieved="2012-09-06", external_class="TAO:0000184", ontology="TAO", source="Curator"} property_value: UBPROP:0000008 "Found in some early members of Chelonia (e.g. Triassochelys), but missing in all later forms." xsd:string {source="VSAO"} [Term] id: UBERON:0004743 name: coracoid bone namespace: uberon def: "Endochondral bone that is paired and forms part of the socket for the humerus in tetrapods and acts as base of the pectoral fin in fish." [VSAO:curator, Wikipedia:Coracoid] synonym: "clavicula" RELATED [AAO:0000764] synonym: "clavicula posterior" RELATED [AAO:0000764] synonym: "clavicula vera" RELATED [AAO:0000764] synonym: "coracoid" EXACT [ZFA:0000332] synonym: "coracoideum" RELATED [AAO:0000764] synonym: "coracoidien" RELATED [AAO:0000764] synonym: "coracoids" EXACT [ZFA:0000332] synonym: "metacoracoid" RELATED [VSAO:0000158] synonym: "pars sternalis scapulae" RELATED [AAO:0000764] xref: AAO:0000764 xref: TAO:0000332 xref: VSAO:0000158 xref: Wikipedia:Coracoid xref: ZFA:0000332 is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 {source="VSAO"} ! pectoral girdle skeleton property_value: IAO:0000116 "check developmental relationships." xsd:string property_value: RO:0002161 NCBITaxon:32525 {reference="ISBN:0-03-910284-X"} property_value: UBPROP:0000001 "Endochondral bone that articulates dorsally with the scapula and with the mesocoracoid when the latter is present, posteriorly with the lower two or three proximal radials and antero-ventrally with the cleithrum. The coracoid develops from the scapulo-coracoid cartilage. The coracoid is paired.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000332", ontology="TAO", source="TAO:GA_TG", source="TAO:wd"} property_value: UBPROP:0000001 "Paired cartilaginous structures or endochondral bones located on the posterolateral portions of the zonal area of the pectoral girdle.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000764", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: part_of zonal element (AAO:0000936)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000764", ontology="AAO"} property_value: UBPROP:0000005 "The coracoid is a triangular shaped-bone that usually has an anteriorly directed long process that may joins its counterpart in some fish groups. It may be perforated by the coracoid foramen or it may be notched dorsally and forms the scapulo-coracoid foramen together with a similar notch of the ventral margin of the scapula.[TAO]" xsd:string {date_retrieved="2012-09-06", external_class="TAO:0000332", ontology="TAO", source="Curator"} property_value: UBPROP:0000008 "In Theria, coracoid bones non-existent or fused with the shoulder blades to form coracoid processes[WP]. Procoracoid+coracoid are homologuous with coracoid of teleostomi. The coracoid is a triangular shaped-bone that usually has an anteriorly directed long process that may joins its counterpart in some fish groups. It may be perforated by the coracoid foramen or it may be notched dorsally and forms the scapulo-coracoid foramen together with a similar notch of the ventral margin of the scapula" xsd:string {source="VSAO", source="WP"} property_value: UBPROP:0000013 "see discussion in Kardong - suggests using procoracoid (anterior coracoid) for the element in birds, reptiles, amphibians and fish, and reserving coracoid for the new synapsid/therian structure." xsd:string [Term] id: UBERON:0004753 name: scapulocoracoid namespace: uberon def: "Skeletal element that consists of the scapula and the coracoid[VSAO, modified]." [https://github.com/obophenotype/uberon/issues/125, https://github.com/obophenotype/uberon/issues/66, VSAO:0005002, Wikipedia:Scapulocoracoid] synonym: "coraco-scapular cartilage" NARROW [ZFA:0001455] synonym: "scapulo-coracoid cartilage" NARROW [TAO:0001455] synonym: "scapulocoracoid cartilage" NARROW [TAO:0001455] synonym: "scapulocoracoideum" EXACT [VSAO:0005002] xref: AAO:0000781 xref: TAO:0001455 xref: VSAO:0005002 xref: Wikipedia:Scapulocoracoid xref: ZFA:0001455 relationship: part_of UBERON:0007831 {source="VSAO"} ! pectoral girdle skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: IAO:0000116 "todo - decide whether to create separate classes for cartilage & ossified. Wikipedia considers this absent in Therians, but if considered as a grouping of scapula and coracoid then it would be present" xsd:string property_value: UBPROP:0000001 "either a fusion of the scapula and coracoid (the two main bones of the shoulder girdle), or the scapula & coracoid considered as a single structural unit.[Palaeos]" xsd:string {date_retrieved="2012-09-10", source="http://palaeos.com/vertebrates/glossary/glossaryS.html"} property_value: UBPROP:0000001 "Fused, ossified portions of the scapula, procoracoid, and coracoid.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000781", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "Pectoral fin cartilage that consists of a paired cartilaginous plate of the embryonic primary pectoral girdle and from which the scapular and coracaoid bones ossify.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001455", ontology="TAO", source="TAO:GA_TG", source="ZFIN:curator"} property_value: UBPROP:0000002 "relationship loss: part_of scapular area (AAO:0000935)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000781", ontology="AAO"} property_value: UBPROP:0000012 "ZFA defines as precursor to scapula and coracoid. Cartilage in TAO" xsd:string {external_ontology="ZFA"} [Term] id: UBERON:0004769 name: diaphysis namespace: uberon def: "Subdivision of long bone which forms the part of the bone between the two epiphyses, excluding the metaphyses[FMA,modified]." [FMA:24013, Wikipedia:Diaphysis] subset: pheno_slim subset: uberon_slim synonym: "body of long bone" EXACT [] synonym: "long bone diaphysis" EXACT [] synonym: "shaft of long bone" EXACT [] xref: EMAPA:35504 xref: FMA:24013 xref: GAID:189 xref: MESH:D018483 xref: SCTID:361729006 xref: Wikipedia:Diaphysis is_a: UBERON:0005055 ! zone of long bone property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg" xsd:anyURI property_value: UBPROP:0000001 "Subdivision of long bone which forms the part of the bone between the two epiphyses; together with other the subdivisions of long bone, it constitutes the long bone. Examples: diaphysis of humerus, diaphysis of femur[FMA]." xsd:string {source="FMA:24013"} property_value: UBPROP:0000001 "The main or mid section (shaft) of a long bone. It is made up of cortical bone and usually contains bone marrow and adipose tissue (fat)[WP][FMA:24013, Wikipedia:Diaphysis]." xsd:string {source="FMA:24013, Wikipedia:Diaphysis"} [Term] id: UBERON:0005055 name: zone of long bone namespace: uberon def: "An organ part that is part of a long bone [Automatically generated definition]." [OBOL:automatic] subset: uberon_slim synonym: "long bone zone" EXACT [] xref: FMA:24008 relationship: part_of UBERON:0002495 ! long bone [Term] id: UBERON:0005808 name: bone tissue of long bone namespace: uberon def: "A bone tissue that is part of a long bone." [OBOL:automatic] synonym: "osseous tissue of long bone" RELATED [FMA:83117] xref: FMA:83117 xref: SCTID:425475006 relationship: part_of UBERON:0002495 ! long bone [Term] id: UBERON:0005809 name: cortex of manus bone namespace: uberon def: "The outer or sperficial part of a bone of the manus." [PHENOSCAPE:ad] relationship: part_of UBERON:0001442 ! skeleton of manus relationship: part_of UBERON:0005897 ! manus bone [Term] id: UBERON:0005893 name: leg bone namespace: uberon def: "A bone that is part of the region of the hindlimb that includes the zeugopod and stylopod. Examples: patella, femur, tibia. Counter-examples: any pes phalanx." [https://orcid.org/0000-0002-6601-2165] subset: grouping_class subset: human_reference_atlas xref: EMAPA:37304 {source="MA:th"} xref: MA:0000670 xref: MESH:D007867 is_a: UBERON:0003464 ! hindlimb bone property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0005897 name: manus bone namespace: uberon def: "A bone that is part of the manus skeleton. Note that this includes the carpal bones." [https://orcid.org/0000-0002-6601-2165] subset: human_reference_atlas synonym: "bone of hand" EXACT [] synonym: "bone of hand skeleton" EXACT [] synonym: "bone of manus" EXACT [] synonym: "bone of pectoral limb autopod" EXACT [] synonym: "bone of pectoral limb autopodium" EXACT [] synonym: "forelimb autopod bone" EXACT [] synonym: "forelimb autopodium bone" EXACT [] synonym: "hand bone" EXACT [MA:0000619] xref: EMAPA:35391 xref: MA:0000619 xref: SCTID:426741001 is_a: UBERON:0008962 ! forelimb bone is_a: UBERON:0011250 ! autopod bone relationship: part_of UBERON:0001442 ! skeleton of manus property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0005899 name: pes bone namespace: uberon def: "A bone that is part of the pes skeleton." [https://orcid.org/0000-0002-6601-2165] subset: human_reference_atlas synonym: "bone of foor proper or tarsal skeleton" EXACT [] synonym: "bone of foot" EXACT [] synonym: "bone of pedal skeleton" EXACT [] synonym: "bone of pes" EXACT [] synonym: "foot bone" EXACT [MA:0000643] xref: EMAPA:35354 xref: GAID:192 xref: MA:0000643 xref: MESH:D005529 xref: NCIT:C13068 xref: SCTID:361371005 xref: UMLS:C0016505 {source="ncithesaurus:Foot_Bone"} is_a: UBERON:0003464 ! hindlimb bone is_a: UBERON:0011250 ! autopod bone relationship: part_of UBERON:0001445 ! skeleton of pes property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0006213 name: carpus cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a carpal bone." [OBOL:automatic] synonym: "carpal cartilage condensation" RELATED [EMAPA:18102] xref: EHDAA2:0000221 xref: EHDAA:8544 xref: EMAPA:18102 xref: VHOG:0001123 is_a: UBERON:0015049 ! carpus endochondral element [Term] id: UBERON:0006214 name: carpus pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a carpal bone." [OBOL:automatic] synonym: "carpal pre-cartilage condensation" RELATED [EMAPA:17724] xref: EHDAA2:0000222 xref: EHDAA:6324 xref: EMAPA:17724 xref: VHOG:0000955 is_a: UBERON:0015049 ! carpus endochondral element [Term] id: UBERON:0006234 name: femur pre-cartilage condensation namespace: uberon def: "A femur endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] subset: emapa_ehdaa2 synonym: "femoral pre-cartilage condensation" RELATED [EMAPA:17502] xref: EHDAA2:0000508 xref: EMAPA:17502 xref: VHOG:0000951 is_a: UBERON:0010886 ! hindlimb pre-cartilage condensation is_a: UBERON:0015052 ! femur endochondral element [Term] id: UBERON:0006245 name: humerus cartilage element namespace: uberon def: "A humerus endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] subset: emapa_ehdaa2 synonym: "humeral cartilage condensation" RELATED [EMAPA:17713] xref: EHDAA2:0000787 xref: EHDAA:6240 xref: EMAPA:17713 xref: VHOG:0001120 is_a: UBERON:0010883 ! forelimb cartilage element is_a: UBERON:0015053 ! humerus endochondral element relationship: part_of UBERON:0001440 {source="EHDAA2"} ! forelimb skeleton [Term] id: UBERON:0006246 name: humerus pre-cartilage condensation namespace: uberon def: "A humerus endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] subset: emapa_ehdaa2 synonym: "humeral pre-cartilage condensation" RELATED [EMAPA:17427] xref: EHDAA2:0000788 xref: EHDAA:4192 xref: EMAPA:17427 xref: VHOG:0000950 is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015053 ! humerus endochondral element relationship: part_of UBERON:0001440 {source="EHDAA2"} ! forelimb skeleton [Term] id: UBERON:0006247 name: iliac pre-cartilage condensation namespace: uberon def: "An iliac endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] subset: emapa_ehdaa2 xref: EHDAA2:0000809 xref: EHDAA:9568 xref: EMAPA:18029 xref: VHOG:0000964 is_a: UBERON:0015054 ! iliac endochondral element relationship: part_of UBERON:0007832 {source="EHDAA2"} ! pelvic girdle skeleton [Term] id: UBERON:0006254 name: ischial cartilage element namespace: uberon def: "An ischial endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] subset: emapa_ehdaa2 synonym: "ischial cartilage condensation" RELATED [EMAPA:26930] xref: EHDAA2:0000890 xref: EHDAA:9570 xref: EMAPA:26930 is_a: UBERON:0015056 ! ischial endochondral element relationship: part_of UBERON:0007832 {source="EHDAA2"} ! pelvic girdle skeleton [Term] id: UBERON:0006255 name: ischial pre-cartilage condensation namespace: uberon def: "An ischial endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] subset: emapa_ehdaa2 xref: EHDAA2:0000891 xref: EHDAA:7153 xref: EMAPA:18348 xref: VHOG:0000962 is_a: UBERON:0015056 ! ischial endochondral element relationship: part_of UBERON:0007832 {source="EHDAA2"} ! pelvic girdle skeleton [Term] id: UBERON:0006285 name: pubic pre-cartilage condensation namespace: uberon def: "A pubic endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] subset: emapa_ehdaa2 xref: EHDAA2:0001574 xref: EHDAA:9572 xref: EMAPA:18349 xref: VHOG:0000965 is_a: UBERON:0015055 ! pubic endochondral element relationship: part_of UBERON:0007832 {source="EHDAA2"} ! pelvic girdle skeleton [Term] id: UBERON:0006286 name: radius cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a radius bone." [OBOL:automatic] xref: EHDAA2:0001585 xref: EHDAA:7267 xref: EMAPA:18054 xref: VHOG:0001318 is_a: UBERON:0010883 ! forelimb cartilage element is_a: UBERON:0015001 ! radius endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton [Term] id: UBERON:0006287 name: radius-ulna pre-cartilage condensation namespace: uberon def: "A radius-ulna endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] xref: EHDAA2:0001587 xref: EHDAA:4178 xref: EMAPA:17420 xref: VHOG:0000949 is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015002 ! radius-ulna endochondral element property_value: UBPROP:0000012 "EMAPA has a separate radius-ulna cartilage condensation." xsd:string {external_ontology="EMAPA"} [Term] id: UBERON:0006290 name: scapula cartilage element namespace: uberon def: "A scapula endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] subset: emapa_ehdaa2 xref: EHDAA2:0001777 xref: EHDAA:8368 xref: EMAPA:18343 xref: VHOG:0001125 is_a: UBERON:0015057 ! scapula endochondral element relationship: part_of UBERON:0007831 {source="EHDAA2"} ! pectoral girdle skeleton [Term] id: UBERON:0006291 name: scapula pre-cartilage condensation namespace: uberon def: "A scapula endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] subset: emapa_ehdaa2 xref: EHDAA2:0001778 xref: EHDAA:6041 xref: EMAPA:18027 xref: VHOG:0000960 is_a: UBERON:0015057 ! scapula endochondral element relationship: part_of UBERON:0007831 {source="EHDAA2"} ! pectoral girdle skeleton property_value: UBPROP:0000011 "the scapula has been shown to develop from multiple tissues, such as the dermomyotome of the somites, the mesodermal portion of the soma- topleure (a domain of the lateral plate mesoderm or LPM) and neural crest cell-derived mesenchyme (Huang et al., 2000; Matsuoka et al., 2005; Wang et al., 2005)." xsd:string {source="PMID:21455939"} [Term] id: UBERON:0006306 name: ulna cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a ulna." [OBOL:automatic] xref: EHDAA2:0002098 xref: EHDAA:7269 xref: EMAPA:18055 xref: VHOG:0001155 is_a: UBERON:0010883 ! forelimb cartilage element is_a: UBERON:0015003 ! ulna endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton [Term] id: UBERON:0006633 name: coracoid process of scapula namespace: uberon def: "A process of the scapula in most mammals representing the remnant of the coracoid bone of lower vertebrates thas has become fused with the scapula." [http://www.merriam-webster.com/medical/coracoid%20process, PHENOSCAPE:ad] subset: human_reference_atlas synonym: "coracoid process" EXACT [Wikipedia:Coracoid_process] synonym: "coracoid process of the scapula" EXACT [Wikipedia:Coracoid_process] synonym: "processus coracoideus" RELATED OMO:0003011 [Wikipedia:Coracoid_process] xref: EMAPA:25121 xref: FMA:13455 xref: SCTID:181912007 xref: Wikipedia:Coracoid_process relationship: part_of UBERON:0006849 {source="EMAPA", source="FMA"} ! scapula property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "The coracoid process is a small hook-like structure on the lateral edge of the superior anterior portion of the scapula. Pointing laterally forward, it, together with the acromion, serves to stabilize the shoulder joint. It is palpable in the deltopectoral groove between the deltoid and pectoralis major muscles. It is the site of attachment for several structures: * The pectoralis minor muscle - to 3rd to 5th ribs. * The short head of biceps brachii muscle - to Radial tuberosity. * The coracobrachialis muscle - to medial humerus. * The coracoclavicular ligament - to the clavicle. (The ligament is formed by the conoid ligament and trapezoid ligament.) * The coracoacromial ligament - to the acromion[WP][Wikipedia:Coracoid_process]." xsd:string {source="Wikipedia:Coracoid_process"} property_value: UBPROP:0000008 "In humans is situated on its superior border and serves for the attachment of various muscles" xsd:string [Term] id: UBERON:0006657 name: glenoid fossa namespace: uberon def: "Anatomical cavity for the proximal articular surface of the proximal limb or fin element with the scapulocoracoid or equivalent structure." [PHENOSCAPE:ad] subset: pheno_slim synonym: "cavitas glenoidalis" RELATED OMO:0003011 [Wikipedia:Glenoid_cavity] synonym: "cavitas glenoidalis scapulae" EXACT OMO:0003011 [FMA:23275, FMA:TA] synonym: "cavitus glenoidalis" EXACT [FMA:23275] synonym: "glenoid cavity" EXACT [FMA:23275] synonym: "glenoid cavity" RELATED [AAO:0000749] synonym: "glenoid cavity of scapula" EXACT [FMA:23275] synonym: "glenoid facet" EXACT [] xref: AAO:0000749 xref: EMAPA:25122 xref: FMA:23275 xref: MESH:D061165 {mapping:provider="https://github.com/biopragmatics/biomappings", mapping:justification="https://w3id.org/semapv/vocab/LexicalMatching"} xref: NCIT:C32682 xref: SCTID:181914008 xref: UMLS:C1261046 {source="ncithesaurus:Glenoid_Fossa"} xref: Wikipedia:Glenoid_cavity relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray328.png" xsd:anyURI property_value: UBPROP:0000001 "Cavity for the articulation of the forelimb formed by the scapula, coracoid, and clavicle.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000749", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: part_of scapular area (AAO:0000935)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000749", ontology="AAO"} property_value: UBPROP:0000008 "The glenoid fossa can be associated with the metapterygium in sarcopterygians, or either the meso- or propterygium in basal gnathostomes such as Chondrichthyans" xsd:string {source="ad"} property_value: UBPROP:0000012 "FMA also has classes for the bony parts around the cavity - these may be more useful than the cavity term itself" xsd:string {external_ontology="FMA"} [Term] id: UBERON:0006714 name: tibiofibula namespace: uberon def: "Paired, endochondral bones formed by the fusion of the tibia and fibula. They form the shanks, extending from the knees to the ankles." [AAO:Maglia_et_al_2007] synonym: "os cruris" RELATED [AAO:0000902] synonym: "tibia-fibula" EXACT [XAO:0003213] synonym: "tibiofibula" EXACT [] xref: AAO:0000902 xref: XAO:0003213 is_a: UBERON:0004251 ! hindlimb zeugopod bone relationship: part_of UBERON:0010720 {source="AAO"} ! hindlimb zeugopod skeleton [Term] id: UBERON:0006715 name: radio-ulna namespace: uberon def: "Paired, long bones of endochondral origin formed by the fusion of the radius and ulna." [AAO:Maglia_et_al_2007] synonym: "radioulna" EXACT [XAO:0003209] synonym: "radius+ulna" EXACT [] synonym: "radius-ulna" EXACT [XAO:0003209] xref: AAO:0000901 xref: XAO:0003209 is_a: UBERON:0003466 ! forelimb zeugopod bone is_a: UBERON:0015002 ! radius-ulna endochondral element relationship: part_of UBERON:0010703 {source="VSAO"} ! forelimb zeugopod skeleton [Term] id: UBERON:0006717 name: autopodial skeleton namespace: uberon def: "The collection of all skeletal elements in an autopodium region." [https://orcid.org/0000-0002-6601-2165] synonym: "autopod skeleton" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "autopodial skeleton" EXACT [VSAO:0005019] synonym: "autopodium" RELATED [VSAO:0005019, VSAO:NI] synonym: "skeletal parts of autopod" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "skeleton of autopod" EXACT [https://orcid.org/0000-0002-6601-2165] xref: VSAO:0005019 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0004381 ! skeleton of limb property_value: UBPROP:0000001 "Distal section of the limb skeleton, consisting of the anterior autopodium or posterior autopodium.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005019", ontology="VSAO", source="VSAO:NI"} property_value: UBPROP:0000013 "Naming conventions for pod terms under discussion within phenoscape group" xsd:string [Term] id: UBERON:0006767 name: head of femur namespace: uberon def: "The hemispheric articular surface at the upper extremity of the thigh bone[Stedman, 26th ed]. The femur head is the highest part of the thigh bone. It is supported by the neck of the femur. The head is globular and forms rather more than a hemisphere, is directed upward, medialward, and a little forward, the greater part of its convexity being above and in front. Its surface is smooth, coated with cartilage in the fresh state, except over an ovoid depression, the fovea capitis femoris, which is situated a little below and behind the center of the head, and gives attachment to the ligament of head of femur. If there is a fracture of the neck of the femur, the blood supply through the ligament becomes crucial. In orthopedic surgery, the head of the femur is important because it can undergo avascular necrosis and consequent osteochondritis dissecans. The head is removed in total hip replacement surgery [WP]." [MESH:A02.835.232.500.247.343, Wikipedia:Femur_head] subset: human_reference_atlas subset: pheno_slim synonym: "acetabular head" EXACT [AAO:0000892] synonym: "capital femoral epiphysis" RELATED [http://medical-dictionary.thefreedictionary.com/capital+femoral+epiphysis] synonym: "caput femoris" RELATED OMO:0003011 [AAO:0000892, Wikipedia:Femur_head] synonym: "femoral head" EXACT [FMA:32851] synonym: "femur head" RELATED [MESH:A02.835.232.500.247.343] synonym: "kopf des Schenkelbeins" EXACT OMO:0003011 [FMA:32851, FMA:TA] xref: AAO:0000892 xref: EMAPA:37541 {source="MA:th"} xref: FMA:32851 xref: galen:FemoralHead xref: MA:0003050 xref: MESH:D005270 xref: NCIT:C32718 xref: SCTID:361791000 xref: UMLS:C0015813 {source="ncithesaurus:Head_of_the_Femur"} xref: Wikipedia:Femur_head is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004412 ! proximal epiphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Proximal head of the femur, which articulates with the acetabulum.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000892", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0006768 name: epiphyseal line namespace: uberon synonym: "epiphysial junction" EXACT [FMA:9918] synonym: "line of bony union" EXACT [FMA:9918] xref: FMA:9918 xref: SCTID:333108008 relationship: part_of UBERON:0001438 ! metaphysis [Term] id: UBERON:0006771 name: long bone epiphyseal plate proliferative zone namespace: uberon def: "Germinal layer of the epiphyseal plate where cells are actively dividing as well as producing extracellular matrix[MP]." [MP:0003662] comment: In this zone, chondrocytes undergo rapid mitosis, forming distinctive looking stacks[WP] subset: pheno_slim synonym: "epiphyseal plate proliferative zone" EXACT [] synonym: "zone of proliferation" RELATED [MA:0002976] xref: EMAPA:35507 xref: MA:0002976 is_a: UBERON:0006775 ! zone of epiphyseal plate [Term] id: UBERON:0006772 name: long bone epiphyseal plate hypertrophic zone namespace: uberon def: "The layer of the epiphyseal plate of a long bone where chondrocytes mature and enlarge[MP]." [https://sourceforge.net/tracker/?func=detail&aid=3442184&group_id=76834&atid=1205376, MP:0000165] subset: pheno_slim synonym: "epiphyseal plate hypertrophic zone" EXACT [] synonym: "hypertrophic chondrocyte zone" RELATED [MP:0000165] synonym: "long bone hypertrophic chondrocyte zone" RELATED [MP:0000165] synonym: "maturation zone" RELATED [MA:0002977] synonym: "zone of hypertrophic chondrocytes" RELATED [MA:0002977] xref: EMAPA:35506 xref: MA:0002977 is_a: UBERON:0006775 ! zone of epiphyseal plate property_value: UBPROP:0000012 "there is also MA:0002849 ! hypertrophic cartilage zone" xsd:string {external_ontology="MA"} [Term] id: UBERON:0006773 name: long bone epiphyseal plate ossification zone namespace: uberon def: "Layer of the epiphyseal plate where new bone matrix is deposited[MP]." [MP:0006399] synonym: "epiphyseal plate ossification zone" EXACT [] is_a: UBERON:0006775 ! zone of epiphyseal plate [Term] id: UBERON:0006775 name: zone of epiphyseal plate namespace: uberon relationship: part_of UBERON:0002516 ! epiphyseal plate [Term] id: UBERON:0006801 name: proximal head of humerus namespace: uberon alt_id: UBERON:3000835 def: "Hemispherical structure on proximal epiphysis of humerus that articulates with glenoid cavity[WP,modified]." [Wikipedia:Upper_extremity_of_humerus#Humeral_head] subset: pheno_slim synonym: "caput humeri" RELATED [AAO:0000835, Wikipedia:Upper_extremity_of_humerus#Humeral_head] synonym: "head of humerus" EXACT [FMA:13304] synonym: "humeral head" RELATED [FMA:13304, PHENOSCAPE:curators] xref: AAO:0000835 xref: EMAPA:25050 xref: FMA:13304 xref: galen:HeadOfHumerus xref: NCIT:C32720 xref: SCTID:181924000 xref: UMLS:C0223683 {source="ncithesaurus:Head_of_the_Humerus"} xref: Wikipedia:Upper_extremity_of_humerus#Humeral_head is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004411 ! proximal epiphysis of humerus property_value: UBPROP:0000001 "Hemispherical ball on the proximal end of the humerus that fits into the glenoid cavity of the pectoral girdle to form the shoulder joint[AAO]." xsd:string {external_class="AAO:0000835", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0006802 name: acetabular rim namespace: uberon def: "A prominent unever rim that bounds the acetabulum, serving as the attachment for the acetabular labrum, which reduces its opening, and deepens the surface for formation of the hip joint." [Wikipedia:Acetabulum#Structure] synonym: "acetabular margin" RELATED [] xref: FMA:16941 relationship: part_of UBERON:0001269 ! acetabular part of hip bone [Term] id: UBERON:0006803 name: obturator foramen namespace: uberon def: "The obturator foramen is the hole created by the ischium and pubis bones of the pelvis through which nerves and muscles pass." [Wikipedia:Obturator_foramen] synonym: "foramen obturatorium" EXACT OMO:0003011 [FMA:16999] synonym: "foramen obturatum" RELATED OMO:0003011 [Wikipedia:Obturator_foramen] xref: AAO:0000863 xref: FMA:16999 xref: NCIT:C75332 xref: SCTID:361777006 xref: UMLS:C0223670 {source="ncithesaurus:Obturator_Foramen"} xref: Wikipedia:Obturator_foramen relationship: part_of UBERON:0007832 {source="AAO"} ! pelvic girdle skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/f/ff/Skeletpelvis-pubis.jpg" xsd:anyURI property_value: UBPROP:0000001 "Small opening for the passage of the obturatorius nerve that perforates the pubis.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000863", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: subclass pelvic girdle opening (AAO:0000767)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000863", ontology="AAO"} [Term] id: UBERON:0006805 name: sternal end of clavicle namespace: uberon def: "Medial end of the clavicle, which usually lies on the ventral side of the epicoracoid cartilage, just posterior to the epicoracoid bridge." [AAO:0000812] subset: human_reference_atlas synonym: "extremitas medialis" RELATED [AAO:0000812] synonym: "extremitas sternalis (clavicula)" EXACT [FMA:23297] synonym: "extremitas sternalis claviculae" EXACT OMO:0003011 [FMA:23297, FMA:TA] synonym: "medial end" RELATED [AAO:0000812] synonym: "medial end of clavicle" EXACT [FMA:23297] synonym: "proximal epyphysis of clavicle" RELATED [FMA:23297] xref: AAO:0000812 xref: FMA:23297 xref: SCTID:181920009 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001105 ! clavicle bone property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0006806 name: entepicondyle of humerus namespace: uberon def: "A bony projection on the distal epiphysis of the humerus that is the attachment site for the flexor muscles of the manus. This condyle faces posteriorly (for sprawling tetrapods) or medially (for erect tetrapods)." [http://palaeos.com/vertebrates/glossary/glossaryE.html, PHENOSCAPE:ad] synonym: "e. medialis humeri" RELATED OMO:0003011 [Wikipedia:Medial_epicondyle_of_the_humerus] synonym: "elbow pit" RELATED [Wikipedia:Medial_epicondyle_of_the_humerus] synonym: "entepicondyle" EXACT [PHENOSCAPE:pm] synonym: "epicondylus medialis (humerus)" RELATED [FMA:23441] synonym: "epicondylus medialis humeri" RELATED [AAO:0000782] synonym: "medial epicondyle" BROAD [AAO:0000782] synonym: "medial epicondyle of humerus" RELATED HUMAN_PREFERRED [FMA:23441] synonym: "ventral epicondyle of humerus" RELATED SENSU [Wikipedia:Medial_epicondyle_of_the_humerus] xref: AAO:0000782 xref: FMA:23441 xref: galen:MedialHumeralEpicondyle xref: http://palaeos.com/vertebrates/glossary/images/172x202xentepicondyleA1.gif.pagespeed.ic.EoVgrHaVyX.png xref: SCTID:181929005 xref: Wikipedia:Medial_epicondyle_of_the_humerus is_a: UBERON:0016497 ! epicondyle of humerus relationship: part_of UBERON:0004404 {source="FMA"} ! distal epiphysis of humerus property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray329-Medial_epicondyle_of_the_humerus.png" xsd:anyURI property_value: UBPROP:0000001 "Rounded projection at the distal head of the humerus and medial to the humeral head, which serves as a place of attachment for the flexor muscles antogonistic to those that attach to the lateral epicondyle.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000782", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000007 "entepicondylar" xsd:string [Term] id: UBERON:0006807 name: ectepicondyle of humerus namespace: uberon def: "A bony projection on the distal epiphysis of the humerus that is the attachment site for the extensor muscles of the distal parts of the forelimb. In humans, this is known as the lateral epicondyle, but the position varies across tetrapods." [http://palaeos.com/vertebrates/glossary/glossaryE.html, https://github.com/obophenotype/uberon/issues/40, PHENOSCAPE:ad, PMID:15064415] synonym: "dorsal epicondyle of humerus" RELATED [NCBITaxon:8782, Wikipedia:Lateral_epicondyle_of_the_humerus] synonym: "dorsal epicondyle of the humerus" RELATED SENSU [Wikipedia:Lateral_epicondyle_of_the_humerus] synonym: "e. lateralis humeri" RELATED OMO:0003011 [Wikipedia:Lateral_epicondyle_of_the_humerus] synonym: "ectepicondyle" BROAD [PMID:15064415] synonym: "epicondylus lateralis (humerus)" EXACT [FMA:23442] synonym: "epicondylus lateralis humeri" RELATED [AAO:0000758] synonym: "lateral epicondyle" BROAD [AAO:0000758] synonym: "lateral epicondyle of humerus" RELATED HUMAN_PREFERRED [FMA:23442] xref: AAO:0000758 xref: FMA:23442 xref: galen:LateralHumeralEpicondyle xref: SCTID:181933003 xref: Wikipedia:Lateral_epicondyle_of_the_humerus is_a: UBERON:0016497 ! epicondyle of humerus relationship: part_of UBERON:0004404 {source="FMA"} ! distal epiphysis of humerus property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray420.png" xsd:anyURI property_value: UBPROP:0000001 "Rounded projection at the distal head of the humerus (larger and more prominent than the lateral epicondyle) and lateral to the humeral head, which serves as a place of attachment for the mm extensor antebrachii et carpi radialis, extensor digitorum communis, and in part to the m extensor antebrachii et carpi ulnaris.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000758", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0006810 name: olecranon namespace: uberon def: "The olecranon is a large, thick, curved bony eminence of the forearm that projects behind the elbow. It is situated at the upper (proximal) end of the ulna, one of the two bones in the forearm. When the hand faces forward the olecranon faces towards the back (posteriorly). It is bent forward at the summit so as to present a prominent lip which is received into the olecranon fossa of the humerus in extension of the forearm. Its base is contracted where it joins the body and the narrowest part of the upper end of the ulna. Its posterior surface, directed backward, is triangular, smooth, subcutaneous, and covered by a bursa. Its superior surface is of quadrilateral form, marked behind by a rough impression for the insertion of the Triceps brachii; and in front, near the margin, by a slight transverse groove for the attachment of part of the posterior ligament of the elbow-joint. Its anterior surface is smooth, concave, and forms the upper part of the semilunar notch. Its borders present continuations of the groove on the margin of the superior surface; they serve for the attachment of ligaments, viz. , the back part of the ulnar collateral ligament medially, and the posterior ligament laterally. From the medial border a part of the Flexor carpi ulnaris arises; while to the lateral border the anconeus muscle is attached." [Wikipedia:Olecranon] subset: pheno_slim synonym: "olecranon process" RELATED [Wikipedia:Olecranon] synonym: "olecranon process of ulna" EXACT [Wikipedia:Olecranon] synonym: "ulnar process" RELATED [AAO:0000843] xref: AAO:0000843 xref: FMA:39795 xref: MESH:D056740 {mapping:provider="https://github.com/biopragmatics/biomappings", mapping:justification="https://w3id.org/semapv/vocab/LexicalMatching"} xref: NCIT:C33200 xref: SCTID:181949001 xref: UMLS:C0223710 {source="ncithesaurus:Olecranon"} xref: Wikipedia:Olecranon is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0006822 ! proximal epiphysis of ulna property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png" xsd:anyURI property_value: IAO:0000116 "check AAO" xsd:string property_value: UBPROP:0000001 "Large and thick process situated at the proximal (upper) end of the ulna. Its inner face forms the medial articular surface that articulates with the humeral head.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000843", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0006822 name: proximal epiphysis of ulna namespace: uberon def: "The head of ulna presents an articular surface, part of which, of an oval or semilunar form, is directed downward, and articulates with the upper surface of the triangular articular disk which separates it from the wrist-joint; the remaining portion, directed lateralward, is narrow, convex, and received into the ulnar notch of the radius." [Wikipedia:Head_of_ulna] subset: pheno_slim synonym: "caput ulnae" EXACT OMO:0003011 [FMA:33751, FMA:TA] synonym: "caput ulnae" RELATED OMO:0003011 [Wikipedia:Head_of_ulna] synonym: "head of ulna" EXACT [FMA:33751] synonym: "proximal end of ulna" EXACT [FMA:33751] synonym: "upper end of ulna" EXACT [FMA:33751] xref: FMA:33751 xref: galen:HeadOfUlna xref: SCTID:304590006 xref: Wikipedia:Head_of_ulna is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004386 ! epiphysis of ulna relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:0006836 name: medial tibial tarsal bone namespace: uberon def: "Endochondral tarsal bone that is medially located and between the intermedium and centralia." [VSAO:0005048] synonym: "tibiale" RELATED [AAO:0000912, MA:0001350] xref: AAO:0000912 xref: EMAPA:36179 xref: MA:0001350 xref: VSAO:0005048 is_a: UBERON:0001447 ! tarsal bone property_value: UBPROP:0000001 "One of two element that constitute the basal row of tarsals. The tibiale constitutes the postaxial element. In salamanders this element is aproximatelly rounded, whereas in anurans it is an elongate, cylindrical bone with the proximal and distal heads fused to the heads of the fibulare.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000912", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0006849 name: scapula namespace: uberon alt_id: UBERON:0001124 alt_id: UBERON:0010904 def: "Endochondral bone that is dorsoventrally compressed and provides attachment site for muscles of the pectoral appendage." [https://github.com/obophenotype/uberon/issues/204, https://github.com/obophenotype/uberon/issues/339, VSAO:0000157] subset: efo_slim subset: human_reference_atlas subset: pheno_slim subset: uberon_slim synonym: "scapula bone" RELATED [BTO:0001218] synonym: "scapulae" EXACT OMO:0003004 [ZFA:0000583] synonym: "scapulas" RELATED OMO:0003004 [TAO:0000583] synonym: "shoulder blade" NARROW [] xref: AAO:0000751 xref: BTO:0001218 xref: CALOHA:TS-0897 xref: EFO:0001400 xref: EMAPA:18722 xref: FMA:13394 xref: GAID:186 xref: galen:Scapula xref: MA:0001330 xref: MESH:D012540 xref: NCIT:C12783 xref: SCTID:302517007 xref: TAO:0000583 xref: UMLS:C0036277 {source="ncithesaurus:Scapula"} xref: VHOG:0001398 xref: VSAO:0000157 xref: Wikipedia:Scapula xref: ZFA:0000583 is_a: UBERON:0007829 ! pectoral girdle bone is_a: UBERON:0015057 ! scapula endochondral element relationship: part_of UBERON:0007831 {source="ZFA-abduced"} ! pectoral girdle skeleton property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Endochondral bone that is located medial to the cleithrum, and articulates ventrally with the coracoid, medially with the mesocoracoid when the later is present and posteriorly with the upper one to three proximal radials. The scapula develops from the scapulocoracoid cartilage and belongs to the primary pectoral girdle. It may be perforated by the scapular foramen or it may be notched ventr and forms together with a similar notch of the coracoid the scapulocoracoid foramen[TAO:0000583]." xsd:string {source="TAO:0000583"} property_value: UBPROP:0000001 "Paired bony elements of endochondral origin. They are situated at the level of the jaw articulation, in a vertical position, with the suprascapular margin being dorsal and the glenoid end being ventral.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000751", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: has pars glenoidalis of scapula (AAO:0000753)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000751", ontology="AAO"} property_value: UBPROP:0000002 "relationship loss: part_of scapular area (AAO:0000935)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000751", ontology="AAO"} property_value: UBPROP:0000007 "scapular" xsd:string property_value: UBPROP:0000008 "present in all tetrapods with even vestiges of anterior limbs, e.g., turtles & birds & mammals." xsd:string {source="ISBN:978-0-12-319060-4"} property_value: UBPROP:0000011 "chick scapula is of dual origin and segmentally organized" xsd:string [Term] id: UBERON:0006861 name: diaphysis proper namespace: uberon def: "Subdivision of long bone which forms the part of the bone between two metaphyses. Note that the diaphysis includes the metaphyses, but the diaphysis proper excludes these." [https://orcid.org/0000-0002-6601-2165] subset: pheno_slim synonym: "body proper of long bone" EXACT [FMA:32688] synonym: "long bone diaphysis" RELATED INCONSISTENT [MA:0002803] synonym: "shaft proper of long bone" EXACT [FMA:32688] xref: FMA:32688 xref: MA:0002803 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004769 ! diaphysis property_value: RO:0002171 UBERON:0001438 property_value: UBPROP:0000012 "The MA class is associated with EMAPA:35505 but we associate this with the more precise concept of diaphyseal plate" xsd:string {external_ontology="MA"} [Term] id: UBERON:0006862 name: diaphysis of femur namespace: uberon def: "A diaphysis that is part of a femur[Automatically generated definition]." [OBOL:automatic, Wikipedia:Body_of_femur] subset: pheno_slim synonym: "body of femur" EXACT [FMA:32847] synonym: "corpus femoris" EXACT OMO:0003011 [FMA:32847, FMA:TA] synonym: "femoral diaphysis" EXACT [FMA:32847] synonym: "femoral shaft" EXACT [] synonym: "shaft of femur" EXACT [FMA:32847] xref: EMAPA:37538 {source="MA:th"} xref: FMA:32847 xref: MA:0003055 xref: NCIT:C96209 xref: SCTID:182048009 xref: Wikipedia:Body_of_femur is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0000981 ! femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray244.png" xsd:anyURI property_value: UBPROP:0000001 "The body of the femur (or shaft), almost cylindrical in form, is a little broader above than in the center, broadest and somewhat flattened from before backward below. It is slightly arched, so as to be convex in front, and concave behind, where it is strengthened by a prominent longitudinal ridge, the linea aspera. It presents for examination three borders, separating three surfaces. Of the borders, one, the linea aspera, is posterior, one is medial, and the other, lateral[Wikipedia:Body_of_femur]." xsd:string {source="Wikipedia:Body_of_femur"} [Term] id: UBERON:0006863 name: proximal metaphysis of femur namespace: uberon def: "A proximal metaphysis that is part of a femur." [OBOL:automatic] subset: pheno_slim xref: FMA:32878 is_a: UBERON:0004378 ! proximal metaphysis is_a: UBERON:0006865 ! metaphysis of femur relationship: part_of UBERON:0000981 ! femur relationship: part_of UBERON:0006862 {source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! diaphysis of femur [Term] id: UBERON:0006864 name: distal metaphysis of femur namespace: uberon def: "A distal metaphysis that is part of a femur." [OBOL:automatic] subset: pheno_slim xref: FMA:32881 is_a: UBERON:0004377 ! distal metaphysis is_a: UBERON:0006865 ! metaphysis of femur relationship: part_of UBERON:0000981 ! femur relationship: part_of UBERON:0006862 {source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! diaphysis of femur [Term] id: UBERON:0006865 name: metaphysis of femur namespace: uberon def: "A metaphysis that is part of a femur." [OBOL:automatic] subset: pheno_slim synonym: "femoral metaphysis" EXACT [FMA:32875] xref: EMAPA:37540 {source="MA:th"} xref: FMA:32875 xref: MA:0003052 is_a: UBERON:0001438 ! metaphysis relationship: part_of UBERON:0000981 ! femur relationship: part_of UBERON:0006862 {is_inferred="true", source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! diaphysis of femur [Term] id: UBERON:0007119 name: neck of femur namespace: uberon def: "The femur neck or neck of the femur is a flattened pyramidal process of bone, connecting the femoral head with the femoral shaft, and forming with the latter a wide angle opening medialward." [Wikipedia:Femur_neck] subset: human_reference_atlas subset: pheno_slim synonym: "collum femoris" RELATED OMO:0003011 [Wikipedia:Femur_neck] synonym: "femoral neck" EXACT [FMA:42385] synonym: "femur neck" RELATED [Wikipedia:Femur_neck] synonym: "neck of the femur" RELATED [Wikipedia:Femur_neck] xref: FMA:42385 xref: GAID:201 xref: galen:NeckOfFemur xref: MESH:D005272 xref: NCIT:C61563 xref: SCTID:361792007 xref: UMLS:C0015815 {source="ncithesaurus:Femoral_Neck"} xref: Wikipedia:Femur_neck is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000981 ! femur relationship: part_of UBERON:0006863 ! proximal metaphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0007171 name: border of scapula namespace: uberon synonym: "scapular border" EXACT [FMA:23797] xref: EMAPA:25124 xref: FMA:23797 relationship: part_of UBERON:0006849 ! scapula [Term] id: UBERON:0007172 name: angle of scapula namespace: uberon synonym: "scapular angle" EXACT [FMA:23800] xref: EMAPA:25125 xref: FMA:23800 relationship: part_of UBERON:0006849 ! scapula property_value: seeAlso "https://github.com/obophenotype/uberon/issues/58" xsd:anyURI [Term] id: UBERON:0007173 name: lateral border of scapula namespace: uberon def: "The lateral border (or axillary border, or margin) is the thickest of the three borders of the scapula. It begins above at the lower margin of the glenoid cavity, and inclines obliquely downward and backward to the inferior angle. Immediately below the glenoid cavity is a rough impression, the infraglenoid tuberosity, about 2.5 cm. in length, which gives origin to the long head of the Triceps brachii; in front of this is a longitudinal groove, which extends as far as the lower third of this border, and affords origin to part of the Subscapularis. The inferior third is thin and sharp, and serves for the attachment of a few fibers of the Teres major behind, and of the Subscapularis in front." [Wikipedia:Lateral_border_of_the_scapula] subset: human_reference_atlas synonym: "axillary border of scapula" EXACT [FMA:23239] synonym: "lateral border of scapula" EXACT [FMA:23239] synonym: "lateral part of scapula" RELATED [FMA:23239] synonym: "margo lateralis (scapula)" EXACT [FMA:23239] synonym: "margo lateralis scapulae" EXACT OMO:0003011 [FMA:23239, FMA:TA] xref: EMAPA:25126 xref: FMA:23239 xref: Wikipedia:Lateral_border_of_the_scapula is_a: UBERON:0007171 {source="EMAPA-modified"} ! border of scapula property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0007174 name: medial border of scapula namespace: uberon def: "The medial border of the scapula (vertebral border, medial margin) is the longest of the three borders, and extends from the medial to the inferior angle. It is arched, intermediate in thickness between the superior and the axillary borders, and the portion of it above the spine forms an obtuse angle with the part below. This border presents an anterior and a posterior lip, and an intermediate narrow area. The anterior lip affords attachment to the Serratus anterior; the posterior lip, to the Supraspinatus above the spine, the Infraspinatus below; the area between the two lips, to the Levator scapulC& above the triangular surface at the commencement of the spine, to the Rhomboideus minor on the edge of that surface, and to the Rhomboideus major below it; this last is attached by means of a fibrous arch, connected above to the lower part of the triangular surface at the base of the spine, and below to the lower part of the border." [Wikipedia:Medial_border_of_scapula] subset: human_reference_atlas synonym: "margo medialis (scapula)" EXACT [FMA:23242] synonym: "margo medialis scapulae" EXACT OMO:0003011 [FMA:23242, FMA:TA] synonym: "medial border of the scapula" RELATED [Wikipedia:Medial_border_of_scapula] synonym: "medial margin of the scapula" RELATED [Wikipedia:Medial_border_of_scapula] synonym: "medial part of scapula" EXACT [FMA:23242] synonym: "vertebral border" RELATED [Wikipedia:Medial_border_of_scapula] synonym: "vertebral border of scapula" EXACT [FMA:23242] synonym: "vertebral border of the scapula" RELATED [Wikipedia:Medial_border_of_scapula] xref: EMAPA:25127 xref: FMA:23242 xref: SCTID:368187009 xref: Wikipedia:Medial_border_of_scapula is_a: UBERON:0007171 {source="EMAPA-modified"} ! border of scapula property_value: IAO:0000116 "consider merging with UBERON:1500000 scapular blade, depending on https://github.com/obophenotype/uberon/issues/339. See also http://www.ncbi.nlm.nih.gov/pubmed/20136669" xsd:string property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0007175 name: inferior angle of scapula namespace: uberon def: "An angle of the scapula formed by the union of the vertebral and axillary borders; its dorsal surface affords attachment to the Teres major and frequently to a few fibers of the Latissimus dorsi.[WP,unvetted]." [Wikipedia:Inferior_angle_of_scapula] subset: human_reference_atlas synonym: "angulus inferior (scapula)" EXACT [FMA:13315] synonym: "angulus inferior scapulae" EXACT OMO:0003011 [Wikipedia:Inferior_angle_of_scapula] xref: EMAPA:25128 xref: FMA:13315 xref: Wikipedia:Inferior_angle_of_scapula is_a: UBERON:0007172 {source="EMAPA-modified"} ! angle of scapula property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0007176 name: superior angle of scapula namespace: uberon def: "An angle of the scapula formed by the junction of the superior and vertebral borders. It is thin, smooth, rounded, inclined somewhat lateralward, and gives attachment to a few fibers of the Levator scapulae[WP,unvetted]." [Wikipedia:Superior_angle_of_scapula] subset: human_reference_atlas synonym: "angulus superior (scapula)" EXACT [FMA:23248] synonym: "angulus superior scapulae" EXACT OMO:0003011 [Wikipedia:Superior_angle_of_scapula] synonym: "medial angle of scapula" EXACT [Wikipedia:Superior_angle_of_scapula] synonym: "superior angle zone of scapula" RELATED [FMA:23248] synonym: "superior medial angle of scapula" EXACT [Wikipedia:Superior_angle_of_scapula] xref: EMAPA:25129 xref: FMA:23248 xref: SCTID:368188004 xref: Wikipedia:Superior_angle_of_scapula is_a: UBERON:0007172 {source="EMAPA-modified"} ! angle of scapula property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0007272 name: pectoral appendage skeleton namespace: uberon def: "Skeletal subdivision consisting of the anterior appendicular limb skeleton, excluding the pectoral girdle." [VSAO:0005000, VSAO:NI] synonym: "cheiropterygium" RELATED [VSAO:0005000, VSAO:NI] xref: VSAO:0005000 is_a: UBERON:0011582 ! paired limb/fin skeleton property_value: RO:0002475 UBERON:0007273 [Term] id: UBERON:0007273 name: pelvic appendage skeleton namespace: uberon def: "The collection of all skeletal elements in a pelvic appendage region." [https://orcid.org/0000-0002-6601-2165] is_a: UBERON:0011582 ! paired limb/fin skeleton [Term] id: UBERON:0007389 name: paired limb/fin cartilage namespace: uberon def: "A cartilage tissue that is part of a paired limb or fin." [http://orcid.org/0000-0002-6601-2165] subset: homology_grouping xref: TAO:0001543 xref: ZFA:0001543 relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: UBPROP:0000001 "Cartilage which is part of one of the paired fins.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001543", ontology="TAO", source="ZFIN:curator"} [Term] id: UBERON:0007390 name: pectoral appendage cartilage tissue namespace: uberon def: "A cartilage tissue that is part of a pectoral appendage." [OBOL:automatic] synonym: "pectoral fin cartilage" RELATED [TAO:0000257] xref: TAO:0000257 xref: ZFA:0000257 is_a: UBERON:0007389 ! paired limb/fin cartilage relationship: part_of UBERON:0007272 ! pectoral appendage skeleton property_value: UBPROP:0000001 "Cartilage which is part of the pectoral fin.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000257", ontology="TAO", source="ZFIN:curator"} [Term] id: UBERON:0007391 name: pelvic appendage cartilage tissue namespace: uberon def: "A cartilage tissue that is part of a pelvic appendage." [OBOL:automatic] synonym: "pelvic fin cartilage" RELATED [TAO:0001459] xref: TAO:0001459 xref: ZFA:0001459 is_a: UBERON:0007389 ! paired limb/fin cartilage relationship: part_of UBERON:0007273 ! pelvic appendage skeleton property_value: UBPROP:0000001 "Cartilage which is part of the pelvic fin.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001459", ontology="TAO", source="ZFIN:curator"} [Term] id: UBERON:0007828 name: girdle bone/zone namespace: uberon def: "A bone that is part of a appendage girdle region." [OBOL:automatic] synonym: "girdle bone" EXACT [MA:0000291] xref: EMAPA:35379 xref: MA:0000291 is_a: UBERON:0010740 ! bone of appendage girdle complex relationship: part_of UBERON:0010719 ! girdle skeleton [Term] id: UBERON:0007829 name: pectoral girdle bone namespace: uberon def: "A bone that is part of a pectoral girdle region." [OBOL:automatic] subset: human_reference_atlas subset: vertebrate_core synonym: "bone of pectoral girdle" EXACT [] xref: EMAPA:35669 xref: MA:0000292 is_a: UBERON:0007828 {source="MA"} ! girdle bone/zone is_a: UBERON:0010741 ! bone of pectoral complex relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0007830 name: pelvic girdle bone/zone namespace: uberon def: "A bone element or fused bone that is part of pelvic girdle." [https://orcid.org/0000-0002-6601-2165] subset: human_reference_atlas subset: pheno_slim subset: vertebrate_core synonym: "bone of pelvic girdle" EXACT [] synonym: "pelvic girdle bone" EXACT [MA:0000293] xref: MA:0000293 xref: NCIT:C33287 xref: SCTID:426214007 xref: UMLS:C0030786 {source="ncithesaurus:Pelvic_Bone"} is_a: UBERON:0007828 {source="MA"} ! girdle bone/zone is_a: UBERON:0010742 ! bone of pelvic complex relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: IAO:0000116 "check sacrum, coccyx (MA does NOT include these)" xsd:string property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "typically the ilium, ischium and pubis. These can alternately be considered individual bones, or zones of a single fused bone" xsd:string [Term] id: UBERON:0007831 name: pectoral girdle skeleton namespace: uberon def: "A subdivision of a limb or fin skeleton consisting of bones which connects the upper limb or fin to the axial skeleton on each side. It consists of the clavicle and scapula in humans and, in those species with three bones in the pectoral girdle, the coracoid. Some mammalian species (e.g. the dog and the horse) have only the scapula. In humans, the only joints between the shoulder girdle and axial skeleton are the sternoclavicular joints on each side. No joint exists between each scapula and the rib cage; instead the muscular connection between the two permits relatively great mobility of the shoulder girdle in relation to the pelvic girdle. In those species having only the scapula, no joint exists between the forelimb and the thorax, the only attachment being muscular[WP]. Examples: There are only two instances, right and left pectoral girdle skeletons." [Wikipedia:Pectoral_girdle] subset: efo_slim subset: vertebrate_core synonym: "cingulum pectorale" RELATED OMO:0003011 [Wikipedia:Pectoral_girdle] synonym: "pectoral girdle" RELATED INCONSISTENT [VSAO:0000156] synonym: "scapular girdle" RELATED [TAO:0000407] synonym: "skeletal parts of pectoral girdle" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "skeleton of pectoral girdle" EXACT [https://orcid.org/0000-0002-6601-2165] xref: AAO:0000422 xref: AAO:0000754 xref: EFO:0000946 xref: EHDAA2:0001420 xref: FMA:24141 xref: MAT:0000181 xref: MIAA:0000181 xref: NCIT:C33547 xref: TAO:0000407 xref: UMLS:C0427245 {source="ncithesaurus:Shoulder_Girdle"} xref: VHOG:0001156 xref: VSAO:0000156 xref: Wikipedia:Pectoral_girdle xref: XAO:0003063 xref: ZFA:0000407 is_a: UBERON:0010719 ! girdle skeleton relationship: part_of UBERON:0002091 {source="XAO"} ! appendicular skeleton relationship: part_of UBERON:0012475 ! skeleton of pectoral complex property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/2/22/Pectoral_girdle_front_diagram.svg" xsd:anyURI property_value: UBPROP:0000001 "Anatomical cluster of paired dermal and endochondral bones that attaches to the dorso-posterior part of the cranium, and support the radials and pectoral fin. It consists of two components: the primary pectoral girdle consisting of the endochondral coracoid, scapula and mesocoracoid bones, and the secondary pectoral girdle consisting of the dermal posttemporal, supracleithrum, cleithrum and poscleithrum(thra) bones.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000407", ontology="TAO", source="TAO:wd"} property_value: UBPROP:0000001 "Girdle skeleton consisting of a set of bones linking the axial series to the forelimb/fin skeleton and offering anchoring areas for forelimb/fin and caudal musculature.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000156", ontology="VSAO", source="https://orcid.org/0000-0002-6601-2165"} property_value: UBPROP:0000001 "Skeletal structure immediately behind the head attached to the vertebral column by muscles and supporting the forelimbs.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000422", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000003 "The pectoral girdle is clearly of dual origin, composed of dermal as well as endochondral bones. The endochondral component, the scapulocoracoid, evolved by fusion or enlargment of several basal fin elements. (...) The dermal component of the shoulder girdle evolved from dermal bones of the body's surface. (...) Like endochondral bones, these dermal bones were passed along to tetrapods (...).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001156", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.336 and Figure 9.18", source="http://bgee.unil.ch/"} property_value: UBPROP:0000012 "Note that the VSAO and many ontologies use the label 'pectoral girdle' to denote the skeletal region specifically." xsd:string {external_ontology="VSAO"} [Term] id: UBERON:0007832 name: pelvic girdle skeleton namespace: uberon def: "Skeletal subdivision consisting of a set of bones linking the axial series to the hindlimb zeugopodium and offering anchoring areas for hindlimb and caudal musculature." [VSAO:0000155, Wikipedia:Pelvis] subset: efo_slim subset: vertebrate_core synonym: "pelvic girdle" RELATED INCONSISTENT [VSAO:0000155] synonym: "pelvic girdle skeleton" EXACT [VSAO:0000155] synonym: "skeletal parts of pelvic girdle" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "skeleton of pelvic girdle" EXACT [https://orcid.org/0000-0002-6601-2165] xref: AAO:0000426 xref: AAO:0000768 xref: EFO:0000947 xref: EHDAA2:0001426 xref: EHDAA:7149 xref: EHDAA:8324 xref: EMAPA:18028 xref: FMA:87592 xref: galen:PelvicGirdle xref: http://people.eku.edu/ritchisong/pectoralgirdles.gif xref: MAT:0000182 xref: MIAA:0000182 xref: TAO:0000565 xref: VHOG:0000305 xref: VSAO:0000155 xref: Wikipedia:Pelvis xref: XAO:0003064 xref: ZFA:0000565 is_a: UBERON:0010719 ! girdle skeleton relationship: part_of UBERON:0012476 ! skeleton of pelvic complex property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png" xsd:anyURI property_value: IAO:0000116 "need to resolve whether this is a paired structure or a single belt (Paired in FMA - implicitly paired in VSAO)" xsd:string property_value: UBPROP:0000001 "Anatomical cluster by which the hind limbs are supported and attached to the vertebral column.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000426", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000001 "Anatomical cluster that consists of the paired basipterygia which support the pelvic fin.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000565", ontology="TAO", source="TAO:wd"} property_value: UBPROP:0000001 "Girdle skeleton consisting of a set of bones linking the axial series to the hindlimb/fin skeleton and offering anchoring areas for hindlimb/fin and caudal musculature.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000155", ontology="VSAO", source="https://orcid.org/0000-0002-6601-2165"} property_value: UBPROP:0000003 "The pelvic girdle is never joined by contributions of dermal bone. From its first appearance in placoderms, the pelvic girdle is exclusively endoskeletal. It arose from pterygiophores, perhaps several times, in support of the fin.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000305", ontology="VHOG", source="ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.333", source="http://bgee.unil.ch/"} property_value: UBPROP:0000012 "Note that the VSAO and many ontologies use the label 'pelvic girdle' to denote the skeletal region specifically. We place the EHDAA2 class here, note that this includes the pre-cartilage condensation as parts" xsd:string {external_ontology="VSAO"} [Term] id: UBERON:0007841 name: furcula namespace: uberon def: "Dermal bone that develops from the fusion of the paired clavicle condensations in Archosauria. Serves as both an attachment site for pectoral musculature as well as a mechanical strengthening/ spacing element in the pectoral girdle. [PHENOSCAPE:ad]." [PHENOSCAPE:ad] synonym: "furcula bone" EXACT [] synonym: "fused clavicle" RELATED [] synonym: "wishbone" RELATED [Wikipedia:Furcula] xref: Wikipedia:Furcula is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: IAO:0000116 "currently assigned to be part of the pectoral girdle, but this may be incorrect if PG is a paired structure." xsd:string property_value: RO:0002175 NCBITaxon:436495 property_value: RO:0002175 NCBITaxon:8782 property_value: UBPROP:0000008 "Found in both avian and non-avian theropods including, but not limited to: Coelophysoids, Allosauroids, Spinosauridae, Tyrannosauroids, Oviraptorosauria, Troodontidae and Dromaeosauridae" xsd:string [Term] id: UBERON:0007958 name: central carpal bone namespace: uberon def: "A small bone occasionally found at the dorsal aspect of the wrist between the scaphoid, capitate, and trapezoid; it is developed as an independent cartilage in early foetal life but usually becomes fused with the scaphoid; it occurs normally in most monkeys." [http://www.medilexicon.com/medicaldictionary.php?t=63518] synonym: "central bone" BROAD [http://www.medilexicon.com/medicaldictionary.php?t=63518] synonym: "central carpals" EXACT [] synonym: "centrale" BROAD [MA:0001344] synonym: "os carpi centrale" RELATED [http://epub.ub.uni-muenchen.de/8251/1/8251.pdf] synonym: "os centrale" BROAD [] synonym: "os centrale carpi" RELATED [] xref: FMA:321692 xref: MA:0001344 xref: SCTID:26987000 is_a: UBERON:0001435 {source="MA"} ! carpal bone is_a: UBERON:0012131 ! centrale [Term] id: UBERON:0007959 name: falciform carpal bone namespace: uberon synonym: "os falciform" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "os falciforme" EXACT [https://orcid.org/0000-0002-6601-2165] xref: EMAPA:36171 xref: MA:0001345 is_a: UBERON:0001435 {source="MA"} ! carpal bone property_value: IAO:0000116 "TODO - check relationship to radial sesamoid" xsd:string [Term] id: UBERON:0007960 name: scapholunate namespace: uberon def: "The combined scaphoid and lunate bones." [https://orcid.org/0000-0002-6601-2165] synonym: "intermedioradial carpal bone" RELATED [MA:0001346] synonym: "scapholunate bone" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "scapholunatum" RELATED [https://orcid.org/0000-0002-6601-2165] xref: EMAPA:36166 xref: MA:0001346 is_a: UBERON:0001480 {source="MA"} ! proximal carpal bone property_value: UBPROP:0000008 "present in mouse[based on MA], carnivora[Websters] and macropods" xsd:string {source="WP"} [Term] id: UBERON:0007990 name: proximal sesamoid bone of pes namespace: uberon synonym: "proximal sesamoid bone of foot" EXACT [MA:0001376] xref: EMAPA:37728 {source="MA:th"} xref: MA:0001376 is_a: UBERON:0004248 ! pedal digit bone is_a: UBERON:0008000 ! sesamoid bone of pes [Term] id: UBERON:0007991 name: proximal sesamoid bone of manus namespace: uberon synonym: "proximal sesamoid bone of hand" EXACT [MA:0001377] xref: EMAPA:37729 {source="MA:th"} xref: MA:0001377 is_a: UBERON:0004249 ! manual digit bone is_a: UBERON:0007997 ! sesamoid bone of manus [Term] id: UBERON:0007993 name: ulnar sesamoid bone namespace: uberon synonym: "ulnar sesamoid" EXACT [] xref: EMAPA:36621 xref: MA:0001379 is_a: UBERON:0003466 ! forelimb zeugopod bone is_a: UBERON:0011141 ! appendicular ossicle property_value: IAO:0000116 "compare with pisiform" xsd:string [Term] id: UBERON:0007997 name: sesamoid bone of manus namespace: uberon def: "A sesamoid bone that is part of a manus." [OBOL:automatic] synonym: "sesamoid bone of hand" EXACT [FMA:42353] xref: FMA:42353 xref: SCTID:368448000 is_a: UBERON:0005897 ! manus bone is_a: UBERON:0011141 ! appendicular ossicle relationship: part_of UBERON:0001442 ! skeleton of manus [Term] id: UBERON:0008000 name: sesamoid bone of pes namespace: uberon def: "A sesamoid bone that is part of a pes." [OBOL:automatic] synonym: "sesamoid bone of foot" EXACT [FMA:45096] xref: FMA:45096 xref: SCTID:244675002 is_a: UBERON:0005899 ! pes bone is_a: UBERON:0011141 ! appendicular ossicle relationship: part_of UBERON:0001445 {source="FMA"} ! skeleton of pes [Term] id: UBERON:0008194 name: tibiotarsus namespace: uberon def: "The tibiotarsus is the large bone between the femur and the tarsometatarsus in the leg of a bird. It is the fusion of the proximal part of the tarsus with the tibia. A similar structure also occurred in the Mesozoic Heterodontosauridae. These small ornithischian dinosaurs were unrelated to birds and the similarity of their pes bones is best explained by convergent evolution." [Wikipedia:Tibiotarsus] xref: Wikipedia:Tibiotarsus is_a: UBERON:0003464 ! hindlimb bone is_a: UBERON:0015011 ! tibiotarsus endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0008195 name: tarsometatarsus namespace: uberon def: "The tarsometatarsus is a bone that is found in the lower leg of certain tetrapods, namely birds. It is formed from the fusion of several bones found in other types of animals, and homologous to the mammalian tarsal (ankle) and metatarsal (pes) bones. Despite this, the tarsometatarsus of birds is often referred to as just the tarsus or metatarsus." [Wikipedia:Tarsometatarsus] xref: Wikipedia:Tarsometatarsus is_a: UBERON:0005899 ! pes bone is_a: UBERON:0015012 ! tarsometatarsus endochondral element relationship: part_of UBERON:0001445 ! skeleton of pes property_value: UBPROP:0000008 "found in birds" xsd:string {source="VSAO"} [Term] id: UBERON:0008254 name: styliform cartilage namespace: uberon def: "A styloform element in a cartilaginous state." [https://github.com/obophenotype/uberon/issues/695] is_a: UBERON:0010883 ! forelimb cartilage element is_a: UBERON:0035561 ! styliform element property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/balhoff property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/RDruzinsky property_value: UBPROP:0000001 "shaft of skeletal tissue that articulates with the lateral border of the carpus." xsd:string {source="ISBN:0226313379"} [Term] id: UBERON:0008255 name: right clavicle namespace: uberon def: "A clavicle that is in the right side of a entire appendicular skeleton." [OBOL:automatic] xref: FMA:13322 is_a: UBERON:0001105 {source="FMA"} ! clavicle bone property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern" xsd:anyURI [Term] id: UBERON:0008256 name: left clavicle namespace: uberon def: "A clavicle that is in the left side of a entire appendicular skeleton." [OBOL:automatic] xref: FMA:13323 is_a: UBERON:0001105 {source="FMA"} ! clavicle bone property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern" xsd:anyURI [Term] id: UBERON:0008257 name: radial sesamoid namespace: uberon def: "In the giant panda, a large digitlike preaxial element that articulates with the scapholunatum and the medial border of the first metacarpal." [ISBN:0226313379] synonym: "os sesamoideum radiale" EXACT [ISBN:0226313379] is_a: UBERON:0001435 ! carpal bone is_a: UBERON:0007997 ! sesamoid bone of manus relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0008449 name: trochlear notch namespace: uberon def: "The semilunar notch of the ulna (trochlear notch of ulna, greater sigmoid cavity) is a large depression, formed by the olecranon and the coronoid process, and serving for articulation with the trochlea of the humerus. About the middle of either side of this notch is an indentation, which contracts it somewhat, and indicates the junction of the olecranon and the coronoid process. The notch is concave from above downward, and divided into a medial and a lateral portion by a smooth ridge running from the summit of the olecranon to the tip of the coronoid process. The medial portion is the larger, and is slightly concave transversely; the lateral is convex above, slightly concave below." [Wikipedia:Trochlear_notch] synonym: "incisura semilunaris ulnae" RELATED OMO:0003011 [Wikipedia:Trochlear_notch] synonym: "incisura trochlearis" RELATED [Wikipedia:Trochlear_notch] synonym: "incisura trochlearis ulnae" RELATED OMO:0003011 [Wikipedia:Trochlear_notch] synonym: "semilunar notch" RELATED [Wikipedia:Trochlear_notch] synonym: "semilunar notch of ulna" EXACT [FMA:23619] xref: FMA:23619 xref: Wikipedia:Trochlear_notch is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0006822 ! proximal epiphysis of ulna property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png" xsd:anyURI [Term] id: UBERON:0008772 name: proximal epiphysis of tibia namespace: uberon def: "A proximal epiphysis that is part of a tibia." [OBOL:automatic] subset: pheno_slim synonym: "head of tibia" EXACT [FMA:33113] synonym: "proximal end of tibia" EXACT [FMA:33113] synonym: "proximal tibial epiphysis" EXACT [] synonym: "upper end of tibia" EXACT [FMA:33113] xref: FMA:33113 xref: NCIT:C32722 xref: SCTID:302526005 xref: UMLS:C0932431 {source="ncithesaurus:Head_of_the_Tibia"} xref: Wikipedia:Upper_extremity_of_tibia is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004383 ! epiphysis of tibia relationship: part_of UBERON:0000979 ! tibia [Term] id: UBERON:0008775 name: proximal epiphysis of fibula namespace: uberon def: "A proximal epiphysis that is part of a fibula." [OBOL:automatic] subset: pheno_slim synonym: "caput fibulae" EXACT OMO:0003011 [Wikipedia:Head_of_fibula] synonym: "fibular head" RELATED [FMA:33729] synonym: "head of fibula" EXACT [FMA:33729] synonym: "proximal end of fibula" EXACT [FMA:33729] synonym: "upper end of fibula" EXACT [FMA:33729] xref: EMAPA:37890 {source="MA:th"} xref: FMA:33729 xref: galen:HeadOfFibula xref: NCIT:C32719 xref: SCTID:182080006 xref: UMLS:C0223908 {source="ncithesaurus:Head_of_the_Fibula"} xref: Wikipedia:Head_of_fibula is_a: UBERON:0004380 ! proximal epiphysis is_a: UBERON:0004388 ! epiphysis of fibula relationship: part_of UBERON:0001446 ! fibula property_value: UBPROP:0000001 "The upper extremity or head of the fibula is of an irregular quadrate form, presenting above a flattened articular surface, directed upward, forward, and medialward, for articulation with a corresponding surface on the lateral condyle of the tibia. On the lateral side is a thick and rough prominence continued behind into a pointed eminence, the apex, which projects upward from the posterior part of the head. The prominence, at its upper and lateral part, gives attachment to the tendon of the Biceps femoris and to the fibular collateral ligament of the knee-joint, the ligament dividing the tendon into two parts. The remaining part of the circumference of the head is rough, for the attachment of muscles and ligaments. It presents in front a tubercle for the origin of the upper and anterior fibers of the Peronæus longus, and a surface for the attachment of the anterior ligament of the head; and behind, another tubercle, for the attachment of the posterior ligament of the head and the origin of the upper fibers of the Soleus[Wikipedia:Head_of_fibula]." xsd:string {source="Wikipedia:Head_of_fibula"} [Term] id: UBERON:0008786 name: third trochanter namespace: uberon def: "The upper part of the gluteal tuberosity is often elongated into a roughened crest, on which a more or less well-marked, rounded tubercle, the third trochanter, is occasionally developed." [Wikipedia:Third_trochanter] synonym: "trochanter tertius" RELATED OMO:0003011 [Wikipedia:Third_trochanter] xref: FMA:75824 xref: Wikipedia:Third_trochanter is_a: UBERON:0000980 {source="Wikipedia"} ! trochanter relationship: part_of UBERON:0004412 {source="FMA"} ! proximal epiphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/2/2b/Third_trochanter-tweaked.png" xsd:anyURI property_value: UBPROP:0000008 "underdeveloped / not present in humans" xsd:string [Term] id: UBERON:0008787 name: fourth trochanter namespace: uberon def: "A knob-like feature on the medial side of the femur that serves as a muscle attachment." [Wikipedia:Fourth_trochanter] comment: The fourth trochanter first appeared in the Erythrosuchidae, large basal archosaurian predators of the early Triassic period. This seemingly insignificant detail may have made the evolution of dinosaurs possible (all early dinosaurs and many later ones were bipeds), and may also be connected with the ability of the archosaurs or their immediate ancestors to survive the catastrophic Permian-Triassic extinction event[WP]. xref: Wikipedia:Fourth_trochanter is_a: UBERON:0000980 {source="Wikipedia"} ! trochanter [Term] id: UBERON:0008962 name: forelimb bone namespace: uberon def: "A bone that is part of a forelimb region. Examples: humerus, any of the phalanges. Counter-example: scapula (a bone of the pectoral girdle). Note that we consider the forelimb to end at the shoulder." [https://orcid.org/0000-0002-6601-2165] synonym: "free forelimb bone" EXACT [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] synonym: "wing bone" NARROW SENSU [Geisha:syn, NCBITaxon:8782, OBOL:automatic] xref: GAID:178 xref: MESH:D001133 xref: NCIT:C12983 xref: SCTID:368532003 xref: UMLS:C0003793 {source="ncithesaurus:Bone_of_the_Upper_Extremity"} is_a: UBERON:0002428 ! limb bone is_a: UBERON:0010741 ! bone of pectoral complex is_a: UBERON:0015021 ! forelimb endochondral element [Term] id: UBERON:0009000 name: ischial spine namespace: uberon def: "A bony process projecting backward and medialward from the posterior border of the ischium." [BTO:0004149] synonym: "spina ischialis" EXACT [FMA:17028] synonym: "spine of ischium" RELATED [Wikipedia:Ischial_spine] synonym: "spine of the ischium" RELATED [Wikipedia:Ischial_spine] synonym: "the ischial spines" RELATED [Wikipedia:Ischial_spine] xref: BTO:0004149 xref: FMA:17028 xref: SCTID:18074002 xref: Wikipedia:Ischial_spine relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000001 "From the posterior border of the body of the Ischium there extends backward a thin and pointed triangular eminence, the ischial spine, more or less elongated in different subjects. It can serve as a landmark in pudendal anesthesia[Wikipedia:Ischial_spine]." xsd:string {source="Wikipedia:Ischial_spine"} property_value: UBPROP:0000012 "BTO places this in the vertebral column" xsd:string {external_ontology="BTO"} [Term] id: UBERON:0009555 name: short pastern bone namespace: uberon def: "The middle phalanx of digit 3 in a horse." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Pastern] synonym: "equine middle phalanx" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "equine phalanx 2" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "equine phalanx 2 of digit III" EXACT [https://orcid.org/0000-0002-6601-2165] xref: SCTID:370730008 is_a: UBERON:0009558 ! pastern bone is_a: UBERON:0014489 ! middle phalanx of digit 3 property_value: IAO:0000116 "in future this may be merged into a species-neutral phalanx 2 digit III" xsd:string [Term] id: UBERON:0009556 name: long pastern bone namespace: uberon def: "The proximal phalanx of digit 3 in a horse." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Pastern] synonym: "equine phalanx 1 of digit III" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "equine proximal phalanx" EXACT [https://orcid.org/0000-0002-6601-2165] xref: SCTID:370733005 is_a: UBERON:0009558 ! pastern bone is_a: UBERON:0014503 ! proximal phalanx of digit 3 property_value: IAO:0000116 "in future this may be merged into a species-neutral phalanx 1 digit III" xsd:string [Term] id: UBERON:0009558 name: pastern bone namespace: uberon def: "A bone that is part of the pastern region of a horse limb. i.e. proximal or middle (P1 or P2) phalanges in digit 3." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Pastern] xref: Wikipedia:Pastern is_a: UBERON:0003221 ! phalanx property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/56/Equine-dist-forelimb-bones.png" xsd:anyURI property_value: IAO:0000116 "in future this may be merged into a more species-neutral class" xsd:string [Term] id: UBERON:0009859 name: endosteum namespace: uberon def: "A thin layer of connective tissue that lines the surface of the bony tissue that forms the medullary cavity of long bones." [Wikipedia:Endosteum] subset: pheno_slim xref: FMA:32692 xref: NCIT:C13183 xref: SCTID:57487002 xref: UMLS:C0222658 {source="ncithesaurus:Endosteum"} xref: Wikipedia:Endosteum relationship: part_of UBERON:0002495 ! long bone property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg" xsd:anyURI property_value: UBPROP:0000007 "endosteal" xsd:string [Term] id: UBERON:0009878 name: mesopodial skeleton namespace: uberon def: "The collection of all skeletal elements in a mesopodium. Examples: the tarsal skeleton, the carpal skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "basipodium" RELATED [VSAO:0005022, VSAO:NI] synonym: "basipodium skeleton" EXACT [VSAO:0005022, VSAO:NI] synonym: "carpal/tarsal skeleton" EXACT [] synonym: "mesopodial skeleton" EXACT [VSAO:0005022] synonym: "mesopodium" RELATED [VSAO:0005022, VSAO:NI] synonym: "mesopodium skeleton" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "skeletal parts of mesopodium" EXACT [https://orcid.org/0000-0002-6601-2165] xref: VSAO:0005022 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0006717 ! autopodial skeleton property_value: UBPROP:0000001 "Limb skeleton subdivision consisting of endochondral bones increasing the freedom of movement of the autopodia, and located between zeugopodia and autopodia.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005022", ontology="VSAO", source="VSAO:NI"} property_value: UBPROP:0000002 "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: distally_connected_to subdivision of skeleton (UBERON:0010912)[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005022", ontology="VSAO"} [Term] id: UBERON:0009879 name: tarsal skeleton namespace: uberon def: "Subdivision of skeleton that consists of endochondral elements distal to the zeugopodial skeletal elements which constitute the proximal region of the posterior autopod skeleton[PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/94, PHENOSCAPE:ad, VSAO:0005024] subset: pheno_slim synonym: "basipodium" RELATED [VSAO:0005024] synonym: "hind mesopodial skeleton" EXACT [] synonym: "hind mesopodium" EXACT [] synonym: "hind mesopodium skeleton" EXACT [] synonym: "mesopodium" RELATED [VSAO:0005024] synonym: "set of tarsal bones" EXACT [FMA:71339] synonym: "skeletal parts of hind mesopodium" EXACT [] synonym: "tarsal bones" RELATED [] synonym: "tarsal bones set" EXACT [FMA:71339] synonym: "tarsalia" EXACT [XAO:0003211] synonym: "tarsus" RELATED [XAO:0003211] xref: AAO:0000220 xref: EMAPA:19133 xref: FMA:71339 xref: GAID:1223 xref: MA:0000050 xref: SCTID:264228001 xref: SCTID:361796005 xref: VHOG:0001160 xref: VSAO:0005024 xref: Wikipedia:Tarsus_(skeleton) xref: XAO:0003211 is_a: UBERON:0009878 ! mesopodial skeleton relationship: part_of UBERON:0001445 ! skeleton of pes property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: UBPROP:0000001 "Segment of the leg corresponding to the tarsus. It consists of several elements that articulate with the tibia and fibula at one end and the metatarsals at the other end.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000220", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000003 "The three main outgroup taxa of tetrapods, panderichthyids, osteolepiforms, and rhizodontids, have endoskeletal elements corresponding to the stylo- and zeugopodial elements in a tetrapod limb. In addition, there are elements that share the position and possibly the developmental derivation of the ulnare and the intermedium. From these observations, most authors have concluded that the stylo- and zeugopodial elements as well as the proximal mesopodial elements have counterparts in the fins of tetrapod ancestors, but there are no indications of wrist or ankle joints.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001160", ontology="VHOG", source="DOI:10.1002/jez.1100 Wagner GP, Chiu C, The tetrapod limb: A hypothesis on its origin. J Exp Zool (Mol Dev Evol) (2001)", source="http://bgee.unil.ch/"} property_value: UBPROP:0000008 "Not always associated with digits, in sarcopterygians the ulnare is present without true digits being formed, though their homologous radial elements are present" xsd:string {source="PHENOSCAPE:ad"} property_value: UBPROP:0000012 "we assume MA:tarsus belongs here, as there is a distinct class MA:ankle, with the tarsal bone being part of the former. XAO:tarsus is part of the hindlimb skeleton. FMA set-of class lacks definition but we assume this to be equivalent." xsd:string {external_ontology="MA"} [Term] id: UBERON:0009880 name: carpal skeleton namespace: uberon def: "Subdivision of skeleton that consists of the endochondral elements distal to the anterior limb/fin zeugopodial skeletal elements which constitute the proximal region of the anterior autopod skeleton[PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/93, PHENOSCAPE:ad] synonym: "carpal bones" EXACT [EMAPA:25056, FMA:71335] synonym: "carpal bones set" EXACT [FMA:71335] synonym: "carpus" RELATED [MA:0000040, XAO:0003207] synonym: "fore mesopodial skeleton" EXACT [] synonym: "fore mesopodium" RELATED [AAO:0000201] synonym: "fore mesopodium skeleton" EXACT [] synonym: "ossa carpi" EXACT [] synonym: "ossa carpi" RELATED OMO:0003011 [Wikipedia:Carpus] synonym: "set of carpal bones" RELATED [FMA:71335] synonym: "skeletal parts of fore mesopodium" EXACT [] synonym: "skeleton of carpus" EXACT [] xref: AAO:0000201 xref: FMA:71335 xref: http://palaeos.com/vertebrates/glossary/images/382x366xUnciform1.jpg.pagespeed.ic.NirdxtwNVu.jpg xref: MA:0000040 xref: VHOG:0001161 xref: VSAO:0005023 xref: Wikipedia:Carpus xref: XAO:0003207 is_a: UBERON:0009878 ! mesopodial skeleton relationship: part_of UBERON:0001442 ! skeleton of manus property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/58/Carpus.svg" xsd:anyURI property_value: UBPROP:0000001 "Segment of the forearm corresponding to the carpus. It consists of several elements that articulate with the radius and ulna at one end and the metacarpals at the other end.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000201", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000003 "The three main outgroup taxa of tetrapods, panderichthyids, osteolepiforms, and rhizodontids, have endoskeletal elements corresponding to the stylo- and zeugopodial elements in a tetrapod limb. In addition, there are elements that share the position and possibly the developmental derivation of the ulnare and the intermedium. From these observations, most authors have concluded that the stylo- and zeugopodial elements as well as the proximal mesopodial elements have counterparts in the fins of tetrapod ancestors, but there are no indications of wrist or ankle joints.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001161", ontology="VHOG", source="DOI:10.1002/jez.1100 Wagner GP, Chiu C, The tetrapod limb: A hypothesis on its origin. J Exp Zool (Mol Dev Evol) (2001)", source="http://bgee.unil.ch/"} property_value: UBPROP:0000008 "Not always associated with digits, in sarcopterygians the ulnare is present without true digits being formed, though their homologous radial elements are present[PHENOSCAPE:ad]." xsd:string {source="Wikipedia:Carpus#Evolutionary_variations"} property_value: UBPROP:0000008 "The structure of the carpus varies widely between different groups of tetrapods, even among those that retain the full set of five digits. In primitive fossil amphibians, such as Eryops, the carpus consists of three rows of bones; a proximal row of three carpals, a second row of four bones, and a distal row of five bones. The proximal carpals are referred to as the radiale, intermediale, and ulnare, after their proximal articulations, and are homologous with the scaphoid, lunate, and triquetal bones respectively. The remaining bones are simply numbered, as the first to fourth centralia (singular: centrale), and the first to fifth distal carpals. Primitively, each of the distal bones appears to have articulated with a single metacarpal. However, the vast majority of later vertebrates, including modern amphibians, have undergone varying degrees of loss and fusion of these primitive bones, resulting in a smaller number of carpals. Almost all mammals and reptiles, for example, have lost the fifth distal carpal, and have only a single centrale - and even this is missing in humans. The pisiform bone is somewhat unusual, in that it first appears in primitive reptiles, and is never found in amphibians. Because many tetrapods have less than five digits on the forelimb, even greater degrees of fusion are common, and a huge array of different possible combinations are found. The wing of a modern bird, for example, has only two remaining carpals; the radiale (the scaphoid of mammals) and a bone formed from the fusion of four of the distal carpals. In some macropods, the scaphoid and lunar bones are fused into the scaphollunar bone" xsd:string property_value: UBPROP:0000012 "we assume MA:carpus belongs here, as there is a distinct class MA:wrist, with the carpal bone being part of the former. XAO:carpus is part of the forelimb skeleton. FMA set-of class lacks definition but we assume this to be equivalent." xsd:string {external_ontology="MA"} [Term] id: UBERON:0009949 name: humeral diverticulum of clavicular air sac namespace: uberon is_a: UBERON:0010000 ! multicellular anatomical structure relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0009980 name: condyle of femur namespace: uberon def: "A condyle that is part of a distal epiphysis of femur." [OBOL:automatic] subset: human_reference_atlas synonym: "condylus femoralis" EXACT [] synonym: "condylus femoris" EXACT [] synonym: "femoral condyle" EXACT [] synonym: "fibular condyle" RELATED [AAO:0000900] xref: AAO:0000900 xref: FMA:32855 xref: galen:FemoralCondyle xref: NCIT:C114186 xref: SCTID:304912006 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004406 ! distal epiphysis of femur property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000001 "Convex articular facet of the distal head of the femur that articulates with the proximal head of the fibula.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000900", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0009984 name: medial condyle of femur namespace: uberon def: "The medial condyle is one of the two projections on the lower extremity of femur. The medial condyle is larger than the lateral (outer) condyle due to more weight bearing caused by the center of gravity being medial to the knee. On the posterior surface of the condyle the linea aspera (a ridge running down the posterior shaft of the femur) turns into the medial supracondylar ridge. The outermost protrusion on the medial surface of the medial condyle is referred to as the 'medial epicondyle' and can be palpated by running fingers medially from the patella with the knee in flexion." [Wikipedia:Medial_condyle_of_femur] subset: human_reference_atlas synonym: "c. medialis femoris" RELATED OMO:0003011 [Wikipedia:Medial_condyle_of_femur] synonym: "condylus medialis femoris" EXACT OMO:0003011 [FMA:32858, FMA:TA] synonym: "medial condyle of the femur" RELATED [Wikipedia:Medial_condyle_of_femur] synonym: "medial femoral condyle" RELATED [FMA:32858] xref: FMA:32858 xref: SCTID:182056007 xref: Wikipedia:Medial_condyle_of_femur is_a: UBERON:0009980 ! condyle of femur relationship: part_of UBERON:0004406 {source="FMA"} ! distal epiphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0009985 name: lateral condyle of femur namespace: uberon def: "The lateral condyle is one of the two projections on the lower extremity of femur. It is the more prominent and is the broader both in its antero-posterior and transverse diameters." [Wikipedia:Lateral_condyle_of_femur] subset: human_reference_atlas synonym: "c. lateralis femoris" RELATED OMO:0003011 [Wikipedia:Lateral_condyle_of_femur] synonym: "condylus lateralis femoris" EXACT OMO:0003011 [FMA:32859, FMA:TA] synonym: "lateral condyle of the femur" RELATED [Wikipedia:Lateral_condyle_of_femur] synonym: "lateral femoral condyle" RELATED [FMA:32859] xref: FMA:32859 xref: SCTID:182057003 xref: Wikipedia:Lateral_condyle_of_femur is_a: UBERON:0009980 ! condyle of femur relationship: part_of UBERON:0004406 {source="FMA"} ! distal epiphysis of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0009986 name: lateral epicondyle of femur namespace: uberon def: "The lateral epicondyle of the femur, smaller and less prominent than the medial epicondyle, gives attachment to the fibular collateral ligament of the knee-joint. Directly below it is a small depression from which a smooth well-marked groove curves obliquely upward and backward to the posterior extremity of the condyle." [Wikipedia:Lateral_epicondyle_of_the_femur] subset: human_reference_atlas synonym: "e. lateralis femoris" RELATED OMO:0003011 [Wikipedia:Lateral_epicondyle_of_the_femur] synonym: "epicondylus lateralis (femur)" EXACT [FMA:32867] synonym: "epicondylus lateralis femoris" EXACT OMO:0003011 [FMA:32867, FMA:TA] synonym: "lateral femoral epicondyle" RELATED [Wikipedia:Lateral_epicondyle_of_the_femur] xref: FMA:32867 xref: galen:LateralFemoralEpicondyle xref: SCTID:209275007 xref: Wikipedia:Lateral_epicondyle_of_the_femur is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004406 {source="FMA"} ! distal epiphysis of femur relationship: part_of UBERON:0009985 {source="FMA"} ! lateral condyle of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0009987 name: medial epicondyle of femur namespace: uberon def: "The medial epicondyle of the femur is a bony protrusion located on the medial side of the bone's distal end. Located above the medial condyle, it bears an elevation, the adductor tubercle, which serves for the attachment of the superficial part, or 'tendinous insertion', of the adductor magnus. This tendinous part here forms an intermuscular septum which forms the medial separation between the thigh's flexors and extensors. Behind it, and proximally to the medial condyle is a rough impression which gives origin to the medial head of the Gastrocnemius." [Wikipedia:Medial_epicondyle_of_the_femur] subset: human_reference_atlas synonym: "epicondylus medialis (femur)" EXACT [FMA:32864] synonym: "epicondylus medialis femoris" RELATED OMO:0003011 [Wikipedia:Medial_epicondyle_of_the_femur] synonym: "medial femoral epicondyle" RELATED [Wikipedia:Medial_epicondyle_of_the_femur] xref: FMA:32864 xref: galen:MedialFemoralEpicondyle xref: SCTID:209172001 xref: Wikipedia:Medial_epicondyle_of_the_femur is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004406 {source="FMA"} ! distal epiphysis of femur relationship: part_of UBERON:0009984 {source="FMA"} ! medial condyle of femur property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray345.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0009988 name: condyle of humerus namespace: uberon def: "The distal end of the humerus, including the trochlea, capitulum and the olecranon, coronoid and radial fossae." [http://www.medilexicon.com/medicaldictionary.php?t=19715] synonym: "condylus humeri" EXACT OMO:0003011 [] synonym: "humeral condyle" EXACT [FMA:23377] xref: FMA:23377 xref: SCTID:361778001 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004404 ! distal epiphysis of humerus property_value: RO:0002171 UBERON:0016497 property_value: UBPROP:0000008 "As in the N.A., the Condylus humeri is the whole distal end of the bone except the epicondyles. The Capitulum humeri is present in Carnivora, more distinctly in the cat than in the dog. The Fossa coronoidea, present in the cat is medial to the Fossa radialis and accommodates the Processus coronoideus medialis ulnae when the elbow is flexed. A Foramen supratrochleare occurs in carnivora and occasionally in pig.[NOMINA ANATOMICA VETERINARIA (2005)]" xsd:string [Term] id: UBERON:0009989 name: condyle of tibia namespace: uberon def: "One of the lateral or medial condyles of the tibia." [Wikipedia:Tibial_condyle] synonym: "tibial condyle" EXACT [AAO:0000899] xref: AAO:0000899 xref: SCTID:182062002 xref: Wikipedia:Tibial_condyle is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0008772 ! proximal epiphysis of tibia property_value: UBPROP:0000001 "Convex articular facet of the distal head of the femur that articulates with the proximal head of the tibia.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000899", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0009990 name: medial condyle of tibia namespace: uberon def: "The medial condyle is the medial portion of the upper extremity of tibia. It is the site of insertion for the Semimembranosus muscle[WP]." [Wikipedia:Medial_condyle_of_tibia] subset: human_reference_atlas synonym: "c. medialis tibiae" RELATED OMO:0003011 [Wikipedia:Medial_condyle_of_tibia] synonym: "condylus medialis (tibia)" EXACT [FMA:35445] synonym: "condylus medialis tibiae" EXACT OMO:0003011 [FMA:35445, FMA:TA] synonym: "medial condyle of the tibia" RELATED [Wikipedia:Medial_condyle_of_tibia] synonym: "medial tibial condyle" RELATED [Wikipedia:Medial_condyle_of_tibia] xref: FMA:35445 xref: galen:MedialTibialCondyle xref: SCTID:182066004 xref: Wikipedia:Medial_condyle_of_tibia is_a: UBERON:0009989 ! condyle of tibia property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray257.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0009991 name: lateral condyle of tibia namespace: uberon def: "The lateral condyle is the lateral portion of the upper extremity of tibia. It serves as the insertion for the Biceps femoris muscle[WP]." [Wikipedia:Lateral_condyle_of_tibia] subset: human_reference_atlas synonym: "c. lateralis tibiae" RELATED OMO:0003011 [Wikipedia:Lateral_condyle_of_tibia] synonym: "condylus lateralis (tibia)" EXACT [FMA:35448] synonym: "condylus lateralis tibiae" EXACT OMO:0003011 [FMA:35448, FMA:TA] xref: FMA:35448 xref: SCTID:182067008 xref: Wikipedia:Lateral_condyle_of_tibia is_a: UBERON:0009989 ! condyle of tibia property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray257.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0010000 name: multicellular anatomical structure namespace: uberon def: "An anatomical structure that has more than one cell as a part." [CARO:0010000] subset: common_anatomy subset: upper_level synonym: "multicellular structure" EXACT [FBbt:00100313] xref: CARO:0010000 xref: FBbt:00100313 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0000061 ! anatomical structure property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:33208 property_value: RO:0002175 NCBITaxon:4751 [Term] id: UBERON:0010129 name: femur cartilage element namespace: uberon def: "A femur endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "femoral cartilage condensation" EXACT [EMAPA:17742] xref: EMAPA:17742 is_a: UBERON:0010885 ! hindlimb cartilage element is_a: UBERON:0015052 ! femur endochondral element property_value: IAO:0000116 "TODO - request EHDAA2" xsd:string [Term] id: UBERON:0010540 name: tarsus pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a tarsal bone." [OBOL:automatic] xref: EHDAA2:0001978 is_a: UBERON:0015050 ! tarsus endochondral element relationship: part_of UBERON:0001445 {source="EHDAA2"} ! skeleton of pes [Term] id: UBERON:0010541 name: tarsus cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a tarsal bone." [OBOL:automatic] xref: EHDAA2:0001977 is_a: UBERON:0015050 ! tarsus endochondral element relationship: part_of UBERON:0001445 {source="EHDAA2"} ! skeleton of pes [Term] id: UBERON:0010543 name: acropodial skeleton namespace: uberon def: "The subdivision of the skeleton that consists of all the skeletal elements at the distalmost end of the autopodium - i.e. the bones of the digits or their cartilaginous precursors[VSAO,modified]." [https://orcid.org/0000-0002-6601-2165, VSAO:0005028, VSAO:NI] synonym: "acropodial skeleton" EXACT [] synonym: "acropodium" RELATED [VSAO:0005028, VSAO:NI] synonym: "acropodium skeleton" EXACT [] synonym: "digital skeleton" RELATED [] synonym: "digits skeleton" RELATED [] synonym: "phalangeal skeleton" RELATED [] synonym: "set of phalanges" EXACT [FMA:231315] synonym: "skeletal parts of acropodial region" EXACT [] synonym: "skeletal parts of acropodium" RELATED [] synonym: "skeleton of digits" RELATED [] xref: FMA:231315 xref: VSAO:0005028 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0012150 {source="PHENOSCAPE:ni"} ! skeleton of digitopodium [Term] id: UBERON:0010544 name: metacarpus skeleton namespace: uberon def: "The metacarpus is the intermediate part of the manus skeleton that is located between the phalanges (bones of the fingers) distally and the carpus which forms the connection to the forearm. The metacarpus consists of metacarpal bones. The metacarpals form a transverse arch to which the rigid row of distal carpal bones are fixed. The peripheral metacarpals (those of the thumb and little finger) form the sides of the cup of the palmar gutter and as they are brought together they deepen this concavity. The index metacarpal is the most firmly fixed, while the thumb metacarpal articulates with the trapezium and acts independently from the others. The middle metacarpals are tightly united to the carpus by intrinsic interlocking bone elements at their bases. The ring metacarpal forms a transitional element of the semi-independent last metacarpal. [WP,unvetted]." [Wikipedia:Metacarpus] synonym: "anterior metapodial skeleton" EXACT [] synonym: "anterior metapodium" RELATED [VSAO:0005026, VSAO:NI] synonym: "fore metapodial skeleton" RELATED [] synonym: "fore metapodium" RELATED [AAO:0000946, http://en.wiktionary.org/wiki/metapodial, MA:th] synonym: "metacarpal bones" EXACT [FMA:71336] synonym: "metacarpal skeleton" EXACT [] synonym: "metacarpalia" RELATED OMO:0003011 [Wikipedia:Metacarpus] synonym: "metacarpals [I-V]" EXACT [FMA:71336] synonym: "metacarpals set" EXACT [FMA:71336] synonym: "ossa metacarpalia [I-V]" EXACT OMO:0003011 [FMA:71336, FMA:TA] synonym: "ossa metacarpi [I-V]" EXACT OMO:0003011 [FMA:71336, FMA:TA] synonym: "set of metacarpal bones" EXACT [FMA:71336] synonym: "set of metacarpals" EXACT [FMA:71336] synonym: "set of metacarpals [I-V]" EXACT [FMA:71336] synonym: "skeleton of metacarpus" EXACT [] xref: AAO:0000946 xref: FMA:71336 xref: MESH:D050279 xref: VSAO:0005026 xref: Wikipedia:Metacarpus xref: XAO:0003208 is_a: UBERON:0010546 ! metapodial skeleton is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:0012151 {source="PHENOSCAPE:ni"} ! skeleton of manual digitopodium property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg" xsd:anyURI property_value: UBPROP:0000001 "Segment of the forearm corresponding to the metacarpus, which articulates with the carpals at one end and with the phalanges at the other end.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000946", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0010545 name: metatarsus skeleton namespace: uberon def: "Limb segment that consists of the long bones of the pes. The metatarsals are analogous to the metacarpal bones of the manus." [Wikipedia:Metatarsus] synonym: "metatarsal bones set" EXACT [FMA:71340] synonym: "metatarsal skeleton" EXACT [] synonym: "metatarsalia" RELATED [] synonym: "metatarsals [I-V]" EXACT [FMA:71340] synonym: "ossa metatarsalia" RELATED OMO:0003011 [Wikipedia:Metatarsus] synonym: "ossa metatarsalia [I-V]" EXACT OMO:0003011 [FMA:71340, FMA:TA] synonym: "ossa metatarsi[I-V]" EXACT OMO:0003011 [FMA:71340, FMA:TA] synonym: "posterior metapodial skeleton" EXACT [] synonym: "posterior metapodium" RELATED [VSAO:0005027, VSAO:NI] synonym: "set of metatarsal bones" EXACT [FMA:71340] synonym: "set of metatarsals [I-V]" EXACT [FMA:71340] synonym: "skeleton of metatarsus" EXACT [] xref: AAO:0000221 xref: FMA:71340 xref: MESH:D008684 xref: VSAO:0005027 xref: Wikipedia:Metatarsus xref: XAO:0003212 is_a: UBERON:0010546 ! metapodial skeleton is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:0012152 {source="PHENOSCAPE:ni"} ! skeleton of pedal digitopodium property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png" xsd:anyURI property_value: UBPROP:0000001 "Segment of the leg corresponding to the metatarsus, which articulates with the carpals at one end and with the phalanges at the other end.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000221", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0010546 name: metapodial skeleton namespace: uberon def: "Subdivision of skeleton that corresponds to metapodium region, between acropodial skeleton and mesopdoial skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "metacarpal/metatarsal skeleton" EXACT [] synonym: "metapodial skeleton" EXACT [VSAO:0005025] synonym: "metapodium" RELATED [VSAO:0005025, VSAO:NI] synonym: "metapodium skeleton" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "skeletal parts of metapodium" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "skeleton of metapodium" EXACT [] xref: VSAO:0005025 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0012150 {source="PHENOSCAPE:ni"} ! skeleton of digitopodium property_value: UBPROP:0000001 "Endochondral bone complex located between the mesopodium and the acropodium and consisting of the metacarpals or metatarsals.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005025", ontology="VSAO", source="VSAO:NI"} property_value: UBPROP:0000002 "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: connected_to subdivision of skeleton (UBERON:0010912)[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005025", ontology="VSAO"} property_value: UBPROP:0000002 "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: distally_connected_to subdivision of skeleton (UBERON:0010912)[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005025", ontology="VSAO"} [Term] id: UBERON:0010547 name: pedal digit 1 metatarsal pre-cartilage condensation namespace: uberon def: "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 1 mesenchyme." [OBOL:automatic] synonym: "foot digit 1 metatarsal pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 1 metatarsal pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit I metatarsal pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 1 metatarsal pre-cartilage condensation" EXACT [EHDAA2:0002040] xref: EHDAA2:0002040 xref: EMAPA:17725 is_a: UBERON:0010687 ! pedal digit metatarsal pre-cartilage condensation is_a: UBERON:0015037 ! pedal digit 1 metatarsal endochondral element [Term] id: UBERON:0010548 name: pedal digit 2 metatarsal pre-cartilage condensation namespace: uberon def: "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 2 mesenchyme." [OBOL:automatic] synonym: "foot digit 2 metatarsal pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 2 metatarsal pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit II metatarsal pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 2 metatarsal pre-cartilage condensation" EXACT [EHDAA2:0002045] xref: EHDAA2:0002045 xref: EMAPA:17727 is_a: UBERON:0010687 ! pedal digit metatarsal pre-cartilage condensation is_a: UBERON:0015038 ! pedal digit 2 metatarsal endochondral element [Term] id: UBERON:0010549 name: pedal digit 3 metatarsal pre-cartilage condensation namespace: uberon def: "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 3 mesenchyme." [OBOL:automatic] synonym: "foot digit 3 metatarsal pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 3 metatarsal pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit III metatarsal pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 3 metatarsal pre-cartilage condensation" EXACT [EHDAA2:0002050] xref: EHDAA2:0002050 xref: EMAPA:17729 is_a: UBERON:0010687 ! pedal digit metatarsal pre-cartilage condensation is_a: UBERON:0015039 ! pedal digit 3 metatarsal endochondral element [Term] id: UBERON:0010550 name: pedal digit 4 metatarsal pre-cartilage condensation namespace: uberon def: "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 4 mesenchyme." [OBOL:automatic] synonym: "foot digit 4 metatarsal pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 4 metatarsal pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit IV metatarsal pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 4 metatarsal pre-cartilage condensation" EXACT [EHDAA2:0002055] xref: EHDAA2:0002055 xref: EMAPA:17731 is_a: UBERON:0010687 ! pedal digit metatarsal pre-cartilage condensation is_a: UBERON:0015040 ! pedal digit 4 metatarsal endochondral element [Term] id: UBERON:0010551 name: pedal digit 5 metatarsal pre-cartilage condensation namespace: uberon def: "A pedal digit metatarsal pre-cartilage condensation that is part of a pedal digit 5 mesenchyme." [OBOL:automatic] synonym: "foot digit 5 metatarsal pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 5 metatarsal pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit V metatarsal pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 5 metatarsal pre-cartilage condensation" EXACT [EHDAA2:0002060] xref: EHDAA2:0002060 xref: EMAPA:17733 is_a: UBERON:0010687 ! pedal digit metatarsal pre-cartilage condensation is_a: UBERON:0015041 ! pedal digit 5 metatarsal endochondral element [Term] id: UBERON:0010557 name: pedal digit 1 metatarsal cartilage element namespace: uberon def: "A pedal digit metatarsal cartilage condensation that is part of a pedal digit 1 mesenchyme." [OBOL:automatic] synonym: "foot digit 1 metatarsal cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 1 metatarsal cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit I metatarsal cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 1 metatarsal cartilage condensation" EXACT [] xref: EMAPA:18106 is_a: UBERON:0010697 ! pedal digit metatarsal cartilage element is_a: UBERON:0015037 ! pedal digit 1 metatarsal endochondral element [Term] id: UBERON:0010558 name: pedal digit 2 metatarsal cartilage element namespace: uberon def: "A pedal digit metatarsal cartilage element that is part of a pedal digit 2 mesenchyme." [OBOL:automatic] synonym: "foot digit 2 metatarsal cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 2 metatarsal cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit II metatarsal cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 2 metatarsal cartilage element" EXACT [] xref: EMAPA:18111 is_a: UBERON:0010697 ! pedal digit metatarsal cartilage element is_a: UBERON:0015038 ! pedal digit 2 metatarsal endochondral element [Term] id: UBERON:0010559 name: pedal digit 3 metatarsal cartilage element namespace: uberon def: "A pedal digit metatarsal cartilage element that is part of a pedal digit 3 mesenchyme." [OBOL:automatic] synonym: "foot digit 3 metatarsal cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 3 metatarsal cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit III metatarsal cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 3 metatarsal cartilage element" EXACT [] xref: EMAPA:18116 is_a: UBERON:0010697 ! pedal digit metatarsal cartilage element is_a: UBERON:0015039 ! pedal digit 3 metatarsal endochondral element [Term] id: UBERON:0010560 name: pedal digit 4 metatarsal cartilage element namespace: uberon def: "A pedal digit metatarsal cartilage element that is part of a pedal digit 4 mesenchyme." [OBOL:automatic] synonym: "foot digit 4 metatarsal cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 4 metatarsal cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit IV metatarsal cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 4 metatarsal cartilage element" EXACT [] xref: EMAPA:18121 is_a: UBERON:0010697 ! pedal digit metatarsal cartilage element is_a: UBERON:0015040 ! pedal digit 4 metatarsal endochondral element [Term] id: UBERON:0010561 name: pedal digit 5 metatarsal cartilage element namespace: uberon def: "A pedal digit metatarsal cartilage element that is part of a pedal digit 5 mesenchyme." [OBOL:automatic] synonym: "foot digit 5 metatarsal cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 5 metatarsal cartilage element" EXACT [OBOL:accepted] synonym: "pedal digit V metatarsal cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "toe 5 metatarsal cartilage element" EXACT [] xref: EMAPA:18126 is_a: UBERON:0010697 ! pedal digit metatarsal cartilage element is_a: UBERON:0015041 ! pedal digit 5 metatarsal endochondral element [Term] id: UBERON:0010565 name: manual digit 1 metacarpus pre-cartilage condensation namespace: uberon def: "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 1 mesenchyme." [OBOL:automatic] synonym: "finger 1 metacarpus pre-cartilage condensation" EXACT [EHDAA2:0000515] synonym: "fore limb digit 1 metacarpus pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 1 metacarpus pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit I metacarpus pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal 1 pre-cartilage condensation" EXACT [] xref: EHDAA2:0000515 xref: EMAPA:17714 is_a: UBERON:0010698 ! manual digit metacarpus pre-cartilage condensation is_a: UBERON:0015043 ! manual digit 1 metacarpus endochondral element [Term] id: UBERON:0010566 name: manual digit 2 metacarpus pre-cartilage condensation namespace: uberon def: "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 2 mesenchyme." [OBOL:automatic] synonym: "finger 2 metacarpus pre-cartilage condensation" EXACT [EHDAA2:0000521] synonym: "fore limb digit 2 metacarpus pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 2 metacarpus pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit II metacarpus pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal 2 pre-cartilage condensation" EXACT [] xref: EHDAA2:0000521 xref: EMAPA:17716 is_a: UBERON:0010698 ! manual digit metacarpus pre-cartilage condensation is_a: UBERON:0015044 ! manual digit 2 metacarpus endochondral element [Term] id: UBERON:0010567 name: manual digit 3 metacarpus pre-cartilage condensation namespace: uberon def: "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 3 mesenchyme." [OBOL:automatic] synonym: "finger 3 metacarpus pre-cartilage condensation" EXACT [EHDAA2:0000527] synonym: "fore limb digit 3 metacarpus pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 3 metacarpus pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit III metacarpus pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal 3 pre-cartilage condensation" EXACT [] xref: EHDAA2:0000527 xref: EMAPA:17718 is_a: UBERON:0010698 ! manual digit metacarpus pre-cartilage condensation is_a: UBERON:0015045 ! manual digit 3 metacarpus endochondral element [Term] id: UBERON:0010568 name: manual digit 4 metacarpus pre-cartilage condensation namespace: uberon def: "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 4 mesenchyme." [OBOL:automatic] synonym: "finger 4 metacarpus pre-cartilage condensation" EXACT [EHDAA2:0000533] synonym: "fore limb digit 4 metacarpus pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 4 metacarpus pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit IV metacarpus pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal 4 pre-cartilage condensation" EXACT [] xref: EHDAA2:0000533 xref: EMAPA:17720 is_a: UBERON:0010698 ! manual digit metacarpus pre-cartilage condensation is_a: UBERON:0015046 ! manual digit 4 metacarpus endochondral element [Term] id: UBERON:0010569 name: manual digit 5 metacarpus pre-cartilage condensation namespace: uberon def: "A manual digit metacarpus pre-cartilage condensation that is part of a manual digit 5 mesenchyme." [OBOL:automatic] synonym: "finger 5 metacarpus pre-cartilage condensation" EXACT [EHDAA2:0000539] synonym: "fore limb digit 5 metacarpus pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 5 metacarpus pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit V metacarpus pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpal 5 pre-cartilage condensation" EXACT [] xref: EHDAA2:0000539 xref: EMAPA:17722 is_a: UBERON:0010698 ! manual digit metacarpus pre-cartilage condensation is_a: UBERON:0015047 ! manual digit 5 metacarpus endochondral element [Term] id: UBERON:0010570 name: manual digit 1 metacarpus cartilage element namespace: uberon def: "A manual digit metacarpus cartilage element that is part of a manual digit 1 mesenchyme." [OBOL:automatic] synonym: "finger 1 metacarpus cartilage element" EXACT [EHDAA2:0000514] synonym: "fore limb digit 1 metacarpus cartilage element" EXACT [OBOL:accepted] synonym: "hand digit 1 metacarpus cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit I metacarpus cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpus 1 cartilage element" EXACT [] xref: EHDAA2:0000514 xref: EMAPA:18065 is_a: UBERON:0010699 ! manual digit metacarpus cartilage element is_a: UBERON:0015043 ! manual digit 1 metacarpus endochondral element [Term] id: UBERON:0010571 name: manual digit 2 metacarpus cartilage element namespace: uberon def: "A manual digit metacarpus cartilage element that is part of a manual digit 2 mesenchyme." [OBOL:automatic] synonym: "finger 2 metacarpus cartilage element" EXACT [EHDAA2:0000520] synonym: "fore limb digit 2 metacarpus cartilage element" EXACT [OBOL:accepted] synonym: "hand digit 2 metacarpus cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit II metacarpus cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpus 2 cartilage element" EXACT [] xref: EHDAA2:0000520 xref: EMAPA:18070 is_a: UBERON:0010699 ! manual digit metacarpus cartilage element is_a: UBERON:0015044 ! manual digit 2 metacarpus endochondral element [Term] id: UBERON:0010572 name: manual digit 3 metacarpus cartilage element namespace: uberon def: "A manual digit metacarpus cartilage element that is part of a manual digit 3 mesenchyme." [OBOL:automatic] synonym: "finger 3 metacarpus cartilage element" EXACT [EHDAA2:0000526] synonym: "fore limb digit 3 metacarpus cartilage element" EXACT [OBOL:accepted] synonym: "hand digit 3 metacarpus cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit III metacarpus cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpus 3 cartilage element" EXACT [] xref: EHDAA2:0000526 xref: EMAPA:18075 is_a: UBERON:0010699 ! manual digit metacarpus cartilage element is_a: UBERON:0015045 ! manual digit 3 metacarpus endochondral element [Term] id: UBERON:0010573 name: manual digit 4 metacarpus cartilage element namespace: uberon def: "A manual digit metacarpus cartilage element that is part of a manual digit 4 mesenchyme." [OBOL:automatic] synonym: "finger 4 metacarpus cartilage condensation" EXACT [EHDAA2:0000532] synonym: "fore limb digit 4 metacarpus cartilage element" EXACT [OBOL:accepted] synonym: "hand digit 4 metacarpus cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit IV metacarpus cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpus 4 cartilage element" EXACT [] xref: EHDAA2:0000532 xref: EMAPA:18080 is_a: UBERON:0010699 ! manual digit metacarpus cartilage element is_a: UBERON:0015046 ! manual digit 4 metacarpus endochondral element [Term] id: UBERON:0010574 name: manual digit 5 metacarpus cartilage element namespace: uberon def: "A manual digit metacarpus cartilage element that is part of a manual digit 5 mesenchyme." [OBOL:automatic] synonym: "finger 5 metacarpus cartilage condensation" EXACT [EHDAA2:0000538] synonym: "fore limb digit 5 metacarpus cartilage element" EXACT [OBOL:accepted] synonym: "hand digit 5 metacarpus cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit V metacarpus cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "metacarpus 5 cartilage element" EXACT [] xref: EHDAA2:0000538 xref: EMAPA:18085 is_a: UBERON:0010699 ! manual digit metacarpus cartilage element is_a: UBERON:0015047 ! manual digit 5 metacarpus endochondral element [Term] id: UBERON:0010575 name: manual digit 1 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a manual digit 1 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 1 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 1 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit I phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0000516 xref: EMAPA:17715 is_a: UBERON:0010586 ! manual digit phalanx pre-cartilage condensation is_a: UBERON:0015025 ! manual digit 1 phalanx endochondral element [Term] id: UBERON:0010576 name: manual digit 2 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a manual digit 2 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 2 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 2 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit II phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0000522 xref: EMAPA:17717 is_a: UBERON:0010586 ! manual digit phalanx pre-cartilage condensation is_a: UBERON:0015026 ! manual digit 2 phalanx endochondral element [Term] id: UBERON:0010577 name: manual digit 3 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a manual digit 3 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 3 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 3 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit III phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0000528 xref: EMAPA:17719 is_a: UBERON:0010586 ! manual digit phalanx pre-cartilage condensation is_a: UBERON:0015027 ! manual digit 3 phalanx endochondral element [Term] id: UBERON:0010578 name: manual digit 4 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a manual digit 4 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 4 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 4 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit IV phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0000534 xref: EMAPA:17721 is_a: UBERON:0010586 ! manual digit phalanx pre-cartilage condensation is_a: UBERON:0015028 ! manual digit 4 phalanx endochondral element [Term] id: UBERON:0010579 name: manual digit 5 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a manual digit 5 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 5 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 5 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit V phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0000540 xref: EMAPA:17723 is_a: UBERON:0010586 ! manual digit phalanx pre-cartilage condensation is_a: UBERON:0015029 ! manual digit 5 phalanx endochondral element [Term] id: UBERON:0010580 name: pedal digit 1 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a pedal digit 1 mesenchyme." [OBOL:automatic] synonym: "foot digit 1 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 1 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit I phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0002041 xref: EMAPA:17726 is_a: UBERON:0010585 ! pedal digit phalanx pre-cartilage condensation is_a: UBERON:0015031 ! pedal digit 1 phalanx endochondral element [Term] id: UBERON:0010581 name: pedal digit 2 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a pedal digit 2 mesenchyme." [OBOL:automatic] synonym: "foot digit 2 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 2 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit II phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0002046 xref: EMAPA:17728 is_a: UBERON:0010585 ! pedal digit phalanx pre-cartilage condensation is_a: UBERON:0015032 ! pedal digit 2 phalanx endochondral element [Term] id: UBERON:0010582 name: pedal digit 3 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a pedal digit 3 mesenchyme." [OBOL:automatic] synonym: "foot digit 3 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 3 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit III phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0002051 xref: EMAPA:17730 is_a: UBERON:0010585 ! pedal digit phalanx pre-cartilage condensation is_a: UBERON:0015033 ! pedal digit 3 phalanx endochondral element [Term] id: UBERON:0010583 name: pedal digit 4 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a pedal digit 4 mesenchyme." [OBOL:automatic] synonym: "foot digit 4 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 4 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit IV phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0002056 xref: EMAPA:17732 is_a: UBERON:0010585 ! pedal digit phalanx pre-cartilage condensation is_a: UBERON:0015034 ! pedal digit 4 phalanx endochondral element [Term] id: UBERON:0010584 name: pedal digit 5 phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a pedal digit 5 mesenchyme." [OBOL:automatic] synonym: "foot digit 5 phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 5 phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit V phalanx pre-cartilage condensation" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EHDAA2:0002061 xref: EMAPA:17734 is_a: UBERON:0010585 ! pedal digit phalanx pre-cartilage condensation is_a: UBERON:0015035 ! pedal digit 5 phalanx endochondral element [Term] id: UBERON:0010585 name: pedal digit phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a pedal digit mesenchyme." [OBOL:automatic] synonym: "foot digit phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "foot phalanx pre-cartilage condensation" EXACT [VHOG:0000952] synonym: "hind limb digit phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hindlimb phalanx pre-cartilage condensation" EXACT [] synonym: "pes phalanx pre-cartilage condensation" EXACT [] xref: EMAPA:32950 xref: VHOG:0000952 is_a: UBERON:0010700 ! phalanx pre-cartilage condensation is_a: UBERON:0010886 ! hindlimb pre-cartilage condensation is_a: UBERON:0015030 ! pedal digit phalanx endochondral element [Term] id: UBERON:0010586 name: manual digit phalanx pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that is part of a manual digit mesenchyme." [OBOL:automatic] synonym: "fore limb digit phalanx pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "forelimb phalanx pre-cartilage condensation" EXACT [] synonym: "hand digit phalanx pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hand phalanx pre-cartilage condensation" EXACT [VHOG:0000954] synonym: "manus phalanx pre-cartilage condensation" EXACT [] xref: EMAPA:32639 xref: VHOG:0000954 is_a: UBERON:0010700 ! phalanx pre-cartilage condensation is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015024 ! manual digit phalanx endochondral element [Term] id: UBERON:0010675 name: manual digit 1 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a manual digit 1 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 1 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 1 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit I phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18066 is_a: UBERON:0010686 ! manual digit phalanx cartilage element is_a: UBERON:0015025 ! manual digit 1 phalanx endochondral element [Term] id: UBERON:0010676 name: manual digit 2 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a manual digit 2 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 2 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 2 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit II phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18071 is_a: UBERON:0010686 ! manual digit phalanx cartilage element is_a: UBERON:0015026 ! manual digit 2 phalanx endochondral element [Term] id: UBERON:0010677 name: manual digit 3 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a manual digit 3 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 3 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 3 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit III phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18076 is_a: UBERON:0010686 ! manual digit phalanx cartilage element is_a: UBERON:0015027 ! manual digit 3 phalanx endochondral element [Term] id: UBERON:0010678 name: manual digit 4 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a manual digit 4 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 4 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 4 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit IV phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18081 is_a: UBERON:0010686 ! manual digit phalanx cartilage element is_a: UBERON:0015028 ! manual digit 4 phalanx endochondral element [Term] id: UBERON:0010679 name: manual digit 5 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a manual digit 5 mesenchyme." [OBOL:automatic] synonym: "fore limb digit 5 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit 5 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "manual digit V phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18086 is_a: UBERON:0010686 ! manual digit phalanx cartilage element is_a: UBERON:0015029 ! manual digit 5 phalanx endochondral element [Term] id: UBERON:0010680 name: pedal digit 1 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a pedal digit 1 mesenchyme." [OBOL:automatic] synonym: "foot digit 1 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 1 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit I phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18107 is_a: UBERON:0010685 ! pedal digit phalanx cartilage element is_a: UBERON:0015031 ! pedal digit 1 phalanx endochondral element [Term] id: UBERON:0010681 name: pedal digit 2 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a pedal digit 2 mesenchyme." [OBOL:automatic] synonym: "foot digit 2 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 2 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit II phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18112 is_a: UBERON:0010685 ! pedal digit phalanx cartilage element is_a: UBERON:0015032 ! pedal digit 2 phalanx endochondral element [Term] id: UBERON:0010682 name: pedal digit 3 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a pedal digit 3 mesenchyme." [OBOL:automatic] synonym: "foot digit 3 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 3 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit III phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18117 is_a: UBERON:0010685 ! pedal digit phalanx cartilage element is_a: UBERON:0015033 ! pedal digit 3 phalanx endochondral element [Term] id: UBERON:0010683 name: pedal digit 4 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a pedal digit 4 mesenchyme." [OBOL:automatic] synonym: "foot digit 4 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 4 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit IV phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18122 is_a: UBERON:0010685 ! pedal digit phalanx cartilage element is_a: UBERON:0015034 ! pedal digit 4 phalanx endochondral element [Term] id: UBERON:0010684 name: pedal digit 5 phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a pedal digit 5 mesenchyme." [OBOL:automatic] synonym: "foot digit 5 phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit 5 phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "pedal digit V phalanx cartilage element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] xref: EMAPA:18127 is_a: UBERON:0010685 ! pedal digit phalanx cartilage element is_a: UBERON:0015035 ! pedal digit 5 phalanx endochondral element [Term] id: UBERON:0010685 name: pedal digit phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a pedal digit mesenchyme." [OBOL:automatic] synonym: "foot digit phalanx cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit phalanx cartilage condensation" EXACT [OBOL:accepted] xref: EMAPA:32948 is_a: UBERON:0010701 ! phalanx cartilage element is_a: UBERON:0015030 ! pedal digit phalanx endochondral element is_a: UBERON:0035129 ! pes cartilage element [Term] id: UBERON:0010686 name: manual digit phalanx cartilage element namespace: uberon def: "A cartilage element that is part of a manual digit mesenchyme." [OBOL:automatic] synonym: "fore limb digit phalanx cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit phalanx cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] xref: EMAPA:32658 is_a: UBERON:0010701 ! phalanx cartilage element is_a: UBERON:0015024 ! manual digit phalanx endochondral element is_a: UBERON:0035128 ! manus cartilage element [Term] id: UBERON:0010687 name: pedal digit metatarsal pre-cartilage condensation namespace: uberon synonym: "foot digit metatarsal pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit metatarsal pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "metatarsal bone pre-cartilage condensation" EXACT [] synonym: "metatarsal pre-cartilage condensation" RELATED [EMAPA:32956] synonym: "metatarsus pre-cartilage condensation" EXACT [VHOG:0000948] xref: EMAPA:32956 xref: EMAPA:35568 xref: VHOG:0000948 is_a: UBERON:0010886 ! hindlimb pre-cartilage condensation is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element [Term] id: UBERON:0010688 name: skeleton of manual acropodium namespace: uberon def: "The subdivision of the skeleton that consists of all the skeletal elements at the distalmost end of the manual autopodium - i.e. the bones of the hands or their cartilaginous precursors[VSAO,modified]." [https://orcid.org/0000-0002-6601-2165, VSAO:0005029, VSAO:NI] synonym: "all phalanges in forelimb autopod" EXACT [] synonym: "anterior acropodium" RELATED [VSAO:0005029, VSAO:NI] synonym: "anterior acropodium skeleton" EXACT [] synonym: "fore acropodium skeleton" EXACT [] synonym: "hand digit skeleton" EXACT [] synonym: "manual digit skeleton" EXACT [] synonym: "manual phalanges" EXACT OMO:0003004 [VSAO:0005029, VSAO:NI] synonym: "phalanges of hand" EXACT [FMA:71337] synonym: "phalanges of manus" EXACT [] synonym: "set of manual phalanges" EXACT [] synonym: "set of phalanges of hand" EXACT [FMA:71337] synonym: "set of phalanges of manus" EXACT [] xref: FMA:71337 xref: VSAO:0005029 xref: Wikipedia:Phalanges_of_the_hand is_a: UBERON:0010543 ! acropodial skeleton relationship: part_of UBERON:0012151 {source="PHENOSCAPE:ni"} ! skeleton of manual digitopodium [Term] id: UBERON:0010696 name: skeleton of pedal acropodium namespace: uberon def: "The subdivision of the skeleton that consists of all the skeletal elements at the distalmost end of the pedal autopodium - i.e. the bones of the foot or their cartilaginous precursors[cjm]." [https://orcid.org/0000-0002-6601-2165] synonym: "all phalanges in hindlimb autopod" EXACT [] synonym: "foot digit skeleton" EXACT [] synonym: "hind acropodium skeleton" EXACT [] synonym: "pedal phalanges" EXACT [VSAO:0005030, VSAO:NI] synonym: "phalanges of foot" EXACT [FMA:78512] synonym: "phalanges of pes" EXACT [] synonym: "posterior acropodium" RELATED [VSAO:0005030, VSAO:NI] synonym: "posterior acropodium skeleton" EXACT [] synonym: "set of pedal phalanges" EXACT [] synonym: "set of phalanges of foot" EXACT [FMA:78512] synonym: "set of phalanges of pes" EXACT [] xref: FMA:78512 xref: VSAO:0005030 xref: Wikipedia:Phalanges_of_the_foot is_a: UBERON:0010543 ! acropodial skeleton relationship: part_of UBERON:0012152 {source="PHENOSCAPE:ni"} ! skeleton of pedal digitopodium [Term] id: UBERON:0010697 name: pedal digit metatarsal cartilage element namespace: uberon synonym: "foot digit metatarsal cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "hind limb digit metatarsal cartilage condensation" EXACT [OBOL:accepted] synonym: "metatarsal cartilage condensation" RELATED [EMAPA:32951] xref: EMAPA:32951 is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element is_a: UBERON:0035129 ! pes cartilage element property_value: IAO:0000116 "EMAPA represents the specific child classes as being part of the digit mesenchyme - we follow this although for the fully formed structure we represent the metatarsals as adjoining rather than being part of the digit skeleton" xsd:string [Term] id: UBERON:0010698 name: manual digit metacarpus pre-cartilage condensation namespace: uberon synonym: "fore limb digit metacarpus pre-cartilage condensation" EXACT [OBOL:accepted] synonym: "hand digit metacarpus pre-cartilage condensation" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "metacarpal bone pre-cartilage condensation" EXACT [VHOG:0000953] synonym: "metacarpal pre-cartilage condensation" EXACT [] synonym: "metacarpus pre-cartilage condensation" EXACT [VHOG:0000953] xref: EMAPA:32850 xref: VHOG:0000953 is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015042 ! manual digit metacarpus endochondral element [Term] id: UBERON:0010699 name: manual digit metacarpus cartilage element namespace: uberon synonym: "finger metacarpus cartilage element" EXACT [] synonym: "fore limb digit metacarpus cartilage element" EXACT [OBOL:accepted] synonym: "hand digit metacarpus cartilage element" NARROW SENSU [NCBITaxon:9606, OBOL:accepted] synonym: "metacarpal cartilage condensation" RELATED [EMAPA:32849] synonym: "metacarpal cartilage element" EXACT [] synonym: "metacarpus cartilage element" EXACT [] xref: EMAPA:32849 is_a: UBERON:0015042 ! manual digit metacarpus endochondral element is_a: UBERON:0035128 ! manus cartilage element [Term] id: UBERON:0010700 name: phalanx pre-cartilage condensation namespace: uberon xref: EMAPA:32720 is_a: UBERON:0010882 ! limb bone pre-cartilage condensation is_a: UBERON:0015023 ! phalanx endochondral element [Term] id: UBERON:0010701 name: phalanx cartilage element namespace: uberon synonym: "phalanx cartilage condensation" EXACT [EMAPA:32721] xref: EMAPA:32721 is_a: UBERON:0015023 ! phalanx endochondral element is_a: UBERON:0015064 ! autopod cartilage [Term] id: UBERON:0010703 name: forelimb zeugopod skeleton namespace: uberon def: "The collection of all skeletal elements in an forelimb zeugopod region." [https://orcid.org/0000-0002-6601-2165] synonym: "antebrachial skeleton" EXACT [] synonym: "antebrachium skeleton" EXACT [PHENOSCAPE:ni] synonym: "anterior zeugopodium" RELATED [VSAO:0005011, VSAO:NI] synonym: "anterior zeugopodium skeleton" EXACT [VSAO:0005011, VSAO:NI] synonym: "fore epipodium" RELATED [AAO:0000200] synonym: "fore epipodium skeleton" EXACT [] synonym: "forearm skeleton" EXACT [FMA:71199] synonym: "forelimb epipodium" RELATED [VSAO:0005011, VSAO:NI] synonym: "forelimb epipodium skeleton" RELATED [] synonym: "mesomere 2 of pectoral appendage" RELATED HOMOLOGY [ISBN:0226313409] synonym: "radius and ulna" RELATED [] synonym: "skeleton of forearm" EXACT HUMAN_PREFERRED [FMA:71199] synonym: "wing zeugopod skeleton" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] xref: AAO:0000200 xref: FMA:71199 xref: VSAO:0005011 is_a: UBERON:0011584 ! zeugopodial skeleton relationship: part_of UBERON:0001440 ! forelimb skeleton property_value: IAO:0000116 "adding proxinally_connected_to humerus causes inconsistencies - requires investigation" xsd:string property_value: UBPROP:0000001 "Segment of the forearm corresponding to the radius and ulna.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000200", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0010710 name: pectoral fin skeleton namespace: uberon def: "Paired fin skeleton that consists of the supporting endochondral proximal and distal radials and the dermal fins rays or lepidotrichia. The pectoral fin skeleton is located in the thoracic region of the body and articulates with the scapula and coracoid." [TAO:wd] subset: efo_slim synonym: "forefin skeleton" EXACT [TAO:0000943] xref: EFO:0003594 xref: TAO:0000943 xref: VSAO:0000153 xref: ZFA:0000943 is_a: UBERON:0007272 ! pectoral appendage skeleton is_a: UBERON:0010713 ! paired fin skeleton [Term] id: UBERON:0010711 name: pelvic fin skeleton namespace: uberon def: "Paired fin skeleton located in the abdominal position that consists of supporting endochondral radialsB and dermal fin rays or lepidotrichia." [TAO:0001387] xref: TAO:0001387 xref: VSAO:0000154 xref: ZFA:0001387 is_a: UBERON:0007273 ! pelvic appendage skeleton is_a: UBERON:0010713 ! paired fin skeleton property_value: UBPROP:0000012 "the girdle is part of the pelvic fin skeleton in ZFA - needs resolved" xsd:string {external_ontology="ZFA"} [Term] id: UBERON:0010712 name: limb skeleton subdivision namespace: uberon def: "Skeletal subdivision that is a segment of the limb skeleton." [VSAO:0005018, VSAO:NI] xref: VSAO:0005018 is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 {source="VSAO"} ! appendicular skeleton property_value: IAO:0000116 "note the distinction between this and skeleton of limb" xsd:string [Term] id: UBERON:0010713 name: paired fin skeleton namespace: uberon def: "The collection of all skeletal elements in a single paired fin." [https://orcid.org/0000-0002-6601-2165] xref: TAO:0000027 xref: VSAO:0000169 xref: ZFA:0000027 is_a: UBERON:0011582 ! paired limb/fin skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: UBPROP:0000001 "Skeletal system that consists of the paired fins (pectoral or pelvic fins).[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000027", ontology="TAO", source="TAO:wd"} property_value: UBPROP:0000001 "Skeletal system that consists of the paired fins (pectoral or pelvic fins).[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000169", ontology="VSAO", source="TAO:curator"} [Term] id: UBERON:0010714 name: iliac cartilage element namespace: uberon def: "An iliac endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "iliac cartilage condensation" RELATED [EMAPA:18347] xref: EHDAA2:0000808 xref: EMAPA:18347 xref: VHOG:0001126 is_a: UBERON:0015054 ! iliac endochondral element relationship: part_of UBERON:0007832 {source="EHDAA2"} ! pelvic girdle skeleton [Term] id: UBERON:0010718 name: pubic cartilage element namespace: uberon def: "A pubic endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "pubic cartilage condensation" RELATED [EMAPA:26928] xref: EHDAA2:0001573 xref: EMAPA:26928 is_a: UBERON:0015055 ! pubic endochondral element relationship: part_of UBERON:0007832 {source="EHDAA2"} ! pelvic girdle skeleton [Term] id: UBERON:0010719 name: girdle skeleton namespace: uberon def: "The subdivision of the skeleton of either the pectoral or pelvic girdle." [https://orcid.org/0000-0002-6601-2165] synonym: "skeleton of girdle" EXACT [] xref: AAO:0010686 xref: VSAO:0000302 is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: UBPROP:0000001 "Skeletal subdivision that is part of the appendage girdle region.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000302", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070"} property_value: UBPROP:0000002 "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: part_of subdivision of skeleton (UBERON:0010912)[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000302", ontology="VSAO"} property_value: UBPROP:0000002 "relationship type change: subclass skeletal subdivision (VSAO:0000042) CHANGED TO: proximally_connected_to subdivision of skeleton (UBERON:0010912)[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000302", ontology="VSAO"} [Term] id: UBERON:0010720 name: hindlimb zeugopod skeleton namespace: uberon def: "Subdivision of skeleton consisting of all skeletal elements in an hindlimb zeugopod region. Typically consists of the tibia and the fibula." [https://orcid.org/0000-0002-6601-2165] synonym: "crural skeleton" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "crus skeleton" EXACT [PHENOSCAPE:ni] synonym: "hind epipodium" RELATED [AAO:0000216] synonym: "hindlimb epipodium" RELATED [VSAO:0005014, VSAO:NI] synonym: "hindlimb zygopod skeleton" EXACT [] synonym: "mesomere 2 of pelvic appendage" RELATED HOMOLOGY [ISBN:0226313409] synonym: "posterior zeugopodium" RELATED INCONSISTENT [VSAO:0005014] synonym: "posterior zeugopodium skeleton" EXACT [] synonym: "skeleton cruris" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] xref: AAO:0000216 xref: VSAO:0005014 is_a: UBERON:0011584 ! zeugopodial skeleton property_value: UBPROP:0000001 "Segment of the leg corresponding to the tibia and fibula.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000216", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0010721 name: distal tarsal bone namespace: uberon def: "There are three cuneiform bones in the human foot: the medial cuneiform the intermediate cuneiform also known as the middle the lateral cuneiform. They are located between the navicular bone and the first, second and third metatarsal bones and are medial to the cuboid bone[WP, unvetted, human specific]." [Wikipedia:Cuneiform_(anatomy)] synonym: "cuneiform" RELATED [] synonym: "cuneiform bone" EXACT [FMA:24517] synonym: "distal tarsal" EXACT [AAO:0000914] synonym: "distal tarsal bone" EXACT [] synonym: "os cuneiform" EXACT [] synonym: "os cuneiforme" EXACT [] xref: AAO:0000914 xref: FMA:24517 xref: NCIT:C32416 xref: SCTID:182102002 xref: UMLS:C1511560 {source="ncithesaurus:Cuneiform_Bone_of_the_Foot"} xref: Wikipedia:Cuneiform_(anatomy) is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0015099 ! distal tarsal endochondral element is_a: UBERON:0018102 ! distal mesopodial bone relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray268.png" xsd:anyURI property_value: UBPROP:0000001 "Series of elements that articulate with the metatarsals.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000914", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0010723 name: os vesalianum pedis namespace: uberon def: "An accessory bone located proximal to the base of the fifth metatarsal. Its prevalence has been reported to be from 0.1% to 1.0%. This bone is found within the peroneus brevis tendon and is considered to be asymptomatic in the majority of people." [PMID:16291851] synonym: "pedal vesalian bone" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "vesalian bone" BROAD [] xref: SCTID:182149003 is_a: UBERON:0010721 {source="cjm"} ! distal tarsal bone [Term] id: UBERON:0010725 name: accessory navicular bone namespace: uberon def: "An accessory bone of the pes that occasionally develops abnormally in front of the ankle towards the inside of the pes. This bone may be present in approximately 2.5% of the general population and is usually asymptomatic." [Wikipedia:Accessory_navicular_bone] xref: MESH:C536002 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration", author:id="https://orcid.org/0000-0001-9439-5346", mapping:provider="https://github.com/biopragmatics/biomappings"} xref: SCTID:118496000 xref: Wikipedia:Accessory_navicular_bone is_a: UBERON:0005899 ! pes bone [Term] id: UBERON:0010726 name: os vesalianum manus namespace: uberon synonym: "manual vesalian bone" EXACT [http://orcid.org/0000-0002-6601-2165] xref: http://www.anatomyatlases.org/AnatomicVariants/SkeletalSystem/Images/94.jpg is_a: UBERON:0001481 {source="cjm"} ! distal carpal bone [Term] id: UBERON:0010737 name: distal tarsal bone 4 namespace: uberon def: "Endochondral tarsal bone articulating with centralia and metatarsal 4." [VSAO:0005055] synonym: "cuboideum" RELATED [VSAO:0005055] synonym: "distal tarsal 4" BROAD [VSAO:0005055] synonym: "os cuboideum" RELATED OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "os tarsale IV" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "tarsal 4" BROAD [AAO:0000932] xref: AAO:0000932 xref: VSAO:0005055 is_a: UBERON:0010721 ! distal tarsal bone is_a: UBERON:0015111 ! distal tarsal bone 4 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: IAO:0000116 "We need to restrict the logical definition such that it is *only* connecting to metatarsal 4" xsd:string property_value: UBPROP:0000001 "Small element that articulates anteriorly with metatarsal IV. It may be absent in some taxa.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000932", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000013 "NominaAnatomicaVeterinaria uses os cuboideum as an official synonym for distal tarsal IV, but some sources also use this as the label for the human cuboid bone which is regarded to be formed from tarsals IV and V. We therefore decline to use exact syns in either case." xsd:string [Term] id: UBERON:0010738 name: distal tarsal bone 5 namespace: uberon def: "Endochondral tarsal bone articulating with centralia and metatarsal 5." [VSAO:0005056] comment: We need to restrict the logical definition such that it is *only* connecting to metatarsal 5 synonym: "cuboideum" RELATED [VSAO:0005056] synonym: "distal tarsal 5" EXACT [VSAO:0005056] synonym: "tarsal 5" EXACT [AAO:0000933] xref: AAO:0000933 xref: VSAO:0005056 is_a: UBERON:0010721 ! distal tarsal bone is_a: UBERON:0015114 ! distal tarsal bone 5 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000001 "Small element that articulates anteriorly with metatarsal V. It may be absent in some taxa.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000933", ontology="AAO", source="AAO:Francis_1934"} [Term] id: UBERON:0010739 name: distal carpal bone 5 namespace: uberon def: "Endochondral carpal bone similar to distal carpal 4, but lost in most reptiles and mammals." [VSAO:0005047] synonym: "carpal 5" RELATED [AAO:0000851] synonym: "distal carpal 5" EXACT [VSAO:0005047] synonym: "hamate" RELATED [VSAO:0005047] synonym: "os hamatum" RELATED [VSAO:0005047] synonym: "unciform" RELATED [VSAO:0005047] synonym: "uncinate" RELATED [VSAO:0005047] xref: AAO:0000851 xref: VSAO:0005047 is_a: UBERON:0001481 ! distal carpal bone is_a: UBERON:0015096 ! distal carpal bone 5 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton property_value: UBPROP:0000001 "Small element that articulates anteriorly with metacarpal IV(V). It may be fused to carpal 4(3), 5(4), the ulnare, radiale, or other elements.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000851", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "lost in most reptiles and mammals[VSAO]. Small element that articulates anteriorly with metacarpal IV(V). It may be fused to carpal 4(3), 5(4), the ulnare, radiale, or other elements" xsd:string {source="AAO"} [Term] id: UBERON:0010740 name: bone of appendage girdle complex namespace: uberon def: "A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle)." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] subset: pheno_slim synonym: "bone of extended limb/fin region" RELATED [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] synonym: "limb bone" RELATED [MA:0000688, UBERONREF:0000003] xref: EMAPA:35494 xref: MA:0000688 relationship: part_of UBERON:0002091 {notes="UBERONREF:0000003"} ! appendicular skeleton [Term] id: UBERON:0010741 name: bone of pectoral complex namespace: uberon def: "A bone that is part of a pectoral complex. Examples: scapula, manus phalanx, any carpal bone, any bone of the pectoral fin." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] subset: pheno_slim synonym: "bone of forelimb or pectoral fin or pectoral girdle" RELATED [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] synonym: "forelimb bone" RELATED [MA:0000612, UBERONREF:0000003] synonym: "wing bone" NARROW SENSU [UBERONREF:0000003] xref: EMAPA:35933 xref: MA:0000612 is_a: UBERON:0010740 ! bone of appendage girdle complex relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: IAO:0000116 "considering adding pectoral and pelvic complex skeleton classes" xsd:string property_value: UBPROP:0000012 "note that the MA class includes girdle parts so it belongs here;" xsd:string {external_ontology="MA"} [Term] id: UBERON:0010742 name: bone of pelvic complex namespace: uberon def: "A bone that is part of a pelvic complex. Examples: pubis, ischium, fot phalanx, any tarsal bone, any bone of the pelvic fin or girdle." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] subset: pheno_slim synonym: "hindlimb bone" RELATED [MA:0000660, UBERONREF:0000003] xref: EMAPA:35934 xref: MA:0000660 is_a: UBERON:0010740 {source="MA"} ! bone of appendage girdle complex relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: UBPROP:0000012 "the MA class called 'hindlimb bone' belongs here, as it includes bones in the pelvic girdle" xsd:string {external_ontology="MA"} [Term] id: UBERON:0010746 name: iliac blade namespace: uberon def: "The extension of the ilium above the level of the acetabulum. Attachment site for both hindlimb and caudal musculature. Medially is the site of attachment of the sacral ribs, where these exist[PHENOSCAPE:ad]." [https://github.com/obophenotype/uberon/issues/69, PHENOSCAPE:ad] subset: pheno_slim synonym: "a. ossis ilii" EXACT OMO:0003011 [Wikipedia:Wing_of_ilium] synonym: "ala of ilium" EXACT [FMA:42826] synonym: "ala ossis ilii" EXACT OMO:0003011 [FMA:TA, Wikipedia:Wing_of_ilium] synonym: "ilium ala" EXACT [FMA:42826] synonym: "wing of ilium" EXACT [] synonym: "wing of the ilium" EXACT [Wikipedia:Wing_of_ilium] xref: FMA:42826 xref: SCTID:182024000 xref: Wikipedia:Wing_of_ilium relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/a1/Gray235.png" xsd:anyURI property_value: UBPROP:0000008 "Often dorsally expanded in amniotes" xsd:string {source="ad"} [Term] id: UBERON:0010747 name: body of ilium namespace: uberon def: "The body of ilium enters into the formation of the acetabulum, of which it forms rather less than two-fifths. Its external surface is partly articular, partly non-articular; the articular segment forms part of the lunate surface of the acetabulum, the non-articular portion contributes to the acetabular fossa. The internal surface of the body is part of the wall of the lesser pelvis and gives origin to some fibers of the Obturator internus. Below, it is continuous with the pelvic surfaces of the ischium and pubis, only a faint line indicating the place of union." [Wikipedia:Body_of_ilium] subset: pheno_slim synonym: "corpus ossis ilii" RELATED OMO:0003011 [Wikipedia:Body_of_ilium] synonym: "ilium body" EXACT [FMA:42825] xref: FMA:42825 xref: SCTID:292524005 xref: Wikipedia:Body_of_ilium relationship: part_of UBERON:0001273 ! ilium [Term] id: UBERON:0010759 name: equine distal sesamoid namespace: uberon def: "Lies on the palmar aspect of the coffin joint between the second phalanx and third phalanx. articulates closely with the distal phalanx, to which it is connected by the impar ligament of the navicular bone. The impar ligament is very strong and permits relatively little motion between the navicular bone and the distal phalanx." [Wikipedia:Equine_forelimb_anatomy#Distal_sesamoid, Wikipedia:Navicular_bone#Horse_anatomy] synonym: "distal sesamoid bone" RELATED [] synonym: "navicular bone" RELATED INCONSISTENT [Wikipedia:Equine_forelimb_anatomy#Distal_sesamoid] xref: SCTID:370654009 xref: Wikipedia:Navicular_bone#Horse_anatomy is_a: UBERON:0011141 ! appendicular ossicle is_a: UBERON:0011250 ! autopod bone [Term] id: UBERON:0010760 name: supraglenoid tubercle namespace: uberon def: "The supraglenoid tubercle is a region of the scapula to which the long head of the biceps brachii muscle attaches." [Wikipedia:Supraglenoid_tubercle] synonym: "supraglenoid tuberosity" EXACT [FMA:23263] synonym: "tuberculum supraglenoidale" RELATED OMO:0003011 [Wikipedia:Supraglenoid_tubercle] xref: FMA:23263 xref: Wikipedia:Supraglenoid_tubercle relationship: part_of UBERON:0006633 ! coracoid process of scapula property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png" xsd:anyURI [Term] id: UBERON:0010801 name: calcaneum pre-cartilage condensation namespace: uberon def: "A calcaneum endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] synonym: "calcaneous pre-cartilage condensation" EXACT [] xref: EMAPA:17736 is_a: UBERON:0010886 ! hindlimb pre-cartilage condensation is_a: UBERON:0015014 ! calcaneum endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0010842 name: calcaneum cartilage element namespace: uberon def: "A calcaneum endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "calcaneous cartilage element" EXACT [] xref: EMAPA:18143 is_a: UBERON:0015014 ! calcaneum endochondral element is_a: UBERON:0035129 ! pes cartilage element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0010843 name: clavicle cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a clavicle." [OBOL:automatic] xref: EMAPA:18342 relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000008 "In most birds and mammals the clavicles are the only dermal elements in the trunk, and is the only membrane bone associated with the pectoral girdle in these taxa. However, there can be secondary cartilage, or subsequent endochondral ossification, or fusion with endochondral elements. In rodents, the lateral ends of the clavicle are endochondral but the main portion is dermal." xsd:string {source="ISBN:978-0-12-319060-4"} [Term] id: UBERON:0010844 name: clavicle pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a clavicle." [OBOL:automatic] xref: EMAPA:18026 relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000008 "In most birds and mammals the clavicles are the only dermal elements in the trunk, and is the only membrane bone associated with the pectoral girdle in these taxa. However, there can be secondary cartilage, or subsequent endochondral ossification, or fusion with endochondral elements. In rodents, the lateral ends of the clavicle are endochondral but the main portion is dermal." xsd:string {source="ISBN:978-0-12-319060-4"} [Term] id: UBERON:0010846 name: radius pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a radius bone." [OBOL:automatic] xref: EHDAA2:0001586 is_a: UBERON:0015001 ! radius endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton property_value: IAO:0000116 "still to decide whether this is a distinct pre-cartilage condensation" xsd:string [Term] id: UBERON:0010847 name: ulna pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a ulna." [OBOL:automatic] xref: EHDAA2:0002100 xref: EHDAA:6226 is_a: UBERON:0015003 ! ulna endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton [Term] id: UBERON:0010848 name: radius-ulna cartilage element namespace: uberon def: "A radius-ulna endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "radio-ulna cartilage condensation" EXACT [EMAPA:17711] xref: EMAPA:17711 is_a: UBERON:0010883 ! forelimb cartilage element is_a: UBERON:0015002 ! radius-ulna endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton property_value: UBPROP:0000012 "note that this is not represented as a single unit in EHDAA2" xsd:string {external_ontology="EHDAA2"} [Term] id: UBERON:0010849 name: tibia cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a tibia." [OBOL:automatic] xref: EMAPA:18155 is_a: UBERON:0010885 ! hindlimb cartilage element is_a: UBERON:0015004 ! tibia endochondral element relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton [Term] id: UBERON:0010850 name: tibia pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a tibia." [OBOL:automatic] xref: EHDAA2:0002036 is_a: UBERON:0015004 ! tibia endochondral element relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton [Term] id: UBERON:0010851 name: fibula cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a fibula." [OBOL:automatic] synonym: "fibulal cartilage condensation" EXACT [EMAPA:18154] synonym: "fibular cartilage condensation" EXACT [EMAPA:18154] synonym: "fibulra cartilage condensation" RELATED [EMAPA:18154] xref: EMAPA:18154 is_a: UBERON:0010885 ! hindlimb cartilage element is_a: UBERON:0015013 ! fibula endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0010852 name: fibula pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a fibula." [OBOL:automatic] synonym: "fibulal pre-cartilage condensation" EXACT [] synonym: "fibular pre-cartilage condensation" EXACT [] xref: EHDAA2:0000509 xref: EHDAA:6196 is_a: UBERON:0015013 ! fibula endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0010853 name: capitulum of humerus namespace: uberon def: "A smooth, rounded eminence on the lateral portion of the articular surface of the humerus. It articulates with the cupshaped depression on the head of the radius, and is limited to the front and lower part of the bone." [Wikipedia:Capitulum_of_the_humerus] subset: human_reference_atlas synonym: "capitellum" RELATED [Wikipedia:Capitulum_of_the_humerus] synonym: "capitulum humeri" RELATED OMO:0003011 [Wikipedia:Capitulum_of_the_humerus] synonym: "capitulum of humerus" RELATED [Wikipedia:Capitulum_of_the_humerus] synonym: "dorsal condyle of the humerus" RELATED SENSU [Wikipedia:Capitulum_of_the_humerus] synonym: "humeral capitulum" EXACT [FMA:23373] xref: FMA:23373 xref: SCTID:282816008 xref: Wikipedia:Capitulum_of_the_humerus is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0009988 {source="FMA"} ! condyle of humerus property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/b/b9/Capitulumhumeri.PNG" xsd:anyURI property_value: IAO:0000116 "TODO - check AAO." xsd:string {source="WP"} property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "In birds, where forelimb anatomy has adaptation for flight, its functional if not ontogenetic equivalent is the dorsal condyle of the humerus" xsd:string property_value: UBPROP:0000008 "The Capitulum humeri is present in Carnivora, more distinctly in the cat than in the dog. The Fossa coronoidea, present in the cat is medial to the Fossa radialis and accommodates the Processus coronoideus medialis ulnae when the elbow is flexed. A Foramen supratrochleare occurs in carnivora and occasionally in pig.[NOMINA ANATOMICA VETERINARIA (2005)]" xsd:string [Term] id: UBERON:0010881 name: limb cartilage element namespace: uberon def: "A skeletal element that is part of a limb and composed of cartilage tissue." [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:0015061 ! limb endochondral element [Term] id: UBERON:0010882 name: limb bone pre-cartilage condensation namespace: uberon def: "A skeletal element that is part of a limb and composed of pre-cartilage tissue." [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:0015061 ! limb endochondral element [Term] id: UBERON:0010883 name: forelimb cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a forelimb bone." [OBOL:automatic] subset: grouping_class synonym: "forelimb wing cartilaginous condensation" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] synonym: "wing cartilaginous condensation" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] xref: EMAPA:32626 is_a: UBERON:0010881 ! limb cartilage element is_a: UBERON:0015021 ! forelimb endochondral element [Term] id: UBERON:0010884 name: forelimb bone pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a forelimb bone." [OBOL:automatic] subset: grouping_class synonym: "wing bone pre-cartilage condensation" NARROW SENSU [NCBITaxon:8782, OBOL:automatic] xref: EMAPA:32625 is_a: UBERON:0010882 ! limb bone pre-cartilage condensation is_a: UBERON:0015021 ! forelimb endochondral element [Term] id: UBERON:0010885 name: hindlimb cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a hindlimb bone." [OBOL:automatic] synonym: "hindlimb cartilage condensation" EXACT [EMAPA:32632] xref: EMAPA:32632 is_a: UBERON:0010881 ! limb cartilage element is_a: UBERON:0015022 ! hindlimb endochondral element [Term] id: UBERON:0010886 name: hindlimb pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a hindlimb bone." [OBOL:automatic] synonym: "hindlimb pre-cartilage condensation" EXACT [EMAPA:32638] xref: EMAPA:32638 is_a: UBERON:0010882 ! limb bone pre-cartilage condensation is_a: UBERON:0015022 ! hindlimb endochondral element [Term] id: UBERON:0010900 name: tarsometatarsus cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a tarsometatarsus." [OBOL:automatic] is_a: UBERON:0015012 ! tarsometatarsus endochondral element is_a: UBERON:0035129 ! pes cartilage element relationship: part_of UBERON:0001445 ! skeleton of pes [Term] id: UBERON:0010901 name: tarsometatarsus pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a tarsometatarsus." [OBOL:automatic] is_a: UBERON:0015012 ! tarsometatarsus endochondral element relationship: part_of UBERON:0001445 ! skeleton of pes [Term] id: UBERON:0010902 name: tibiotarsus cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a tibiotarsus." [OBOL:automatic] is_a: UBERON:0010885 ! hindlimb cartilage element is_a: UBERON:0015011 ! tibiotarsus endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0010903 name: tibiotarsus pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a tibiotarsus." [OBOL:automatic] is_a: UBERON:0015011 ! tibiotarsus endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0010905 name: clavicle bone primordium namespace: uberon def: "A primordium that develops into a clavicle bone." [https://github.com/obophenotype/uberon/issues/327] comment: lateral part derives from a fish dermal bone while the medial part comes from a spur off the manubrium endochondral bone[JB] synonym: "clavicle primordium" EXACT [] xref: EHDAA2:0000254 relationship: part_of UBERON:0007831 {source="EHDAA2"} ! pectoral girdle skeleton [Term] id: UBERON:0010907 name: parafibula namespace: uberon def: "Third bone of the lower leg, normally restricted to the area of the knee, in multuberculates, monotremes and some therians." [http://palaeos.com/vertebrates/glossary/glossaryP.html#P] is_a: UBERON:0004251 ! hindlimb zeugopod bone property_value: RO:0002175 NCBITaxon:9255 [Term] id: UBERON:0010912 name: subdivision of skeleton namespace: uberon def: "Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints." [https://orcid.org/0000-0002-6601-2165, UBERONREF:0000003] subset: non_informative synonym: "skeletal subdivision" EXACT [VSAO:0000042] synonym: "subdivision of skeleton (in vivo)" RELATED [FMA:23879] xref: FMA:23879 xref: SCTID:129140006 xref: VSAO:0000042 is_a: UBERON:0011216 {source="cjm"} ! organ system subdivision property_value: UBPROP:0000001 "Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000042", notes="incorrect", ontology="VSAO", source="VSAO:curator"} [Term] id: UBERON:0010994 name: coronoid process of ulna namespace: uberon def: "A triangular eminence projecting forward from the proximal epiphysis of the ulna[WP,modified]." [Wikipedia:Coronoid_process_of_the_ulna] subset: human_reference_atlas synonym: "coronoid process" BROAD [FMA:23616] synonym: "coronoid process of the ulna" EXACT [Wikipedia:Coronoid_process_of_the_ulna] synonym: "processus coronoideus" EXACT [FMA:23616] synonym: "processus coronoideus ulnae" RELATED OMO:0003011 [Wikipedia:Coronoid_process_of_the_ulna] synonym: "ulnar coronoid process" EXACT [] xref: FMA:23616 xref: SCTID:181951002 xref: Wikipedia:Coronoid_process_of_the_ulna relationship: part_of UBERON:0006822 {source="FMA"} ! proximal epiphysis of ulna property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0011015 name: iliac fossa namespace: uberon xref: FMA:75316 xref: NCIT:C103454 xref: SCTID:182341009 relationship: part_of UBERON:0001273 ! ilium [Term] id: UBERON:0011090 name: skeleton of right pelvic girdle namespace: uberon def: "A skeleton of pelvic girdle that is part of a right pelvic girdle region." [OBOL:automatic] xref: FMA:87593 is_a: UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:0011091 name: skeleton of left pelvic girdle namespace: uberon def: "A skeleton of pelvic girdle that is part of a left pelvic girdle region." [OBOL:automatic] xref: FMA:87594 is_a: UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:0011104 name: epiphysis of fifth metacarpal bone namespace: uberon def: "An epiphysis that is part of a metacarpal bone of digit 5." [OBOL:automatic] synonym: "fifth metacarpal bone epiphysis" EXACT [FMA:86330] synonym: "metacarpal 5 epiphysis" EXACT [] xref: FMA:86330 is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0003649 ! metacarpal bone of digit 5 [Term] id: UBERON:0011141 name: appendicular ossicle namespace: uberon def: "Ossicle that is part of the appendicular skeleton." [PSPUB:0000169, VSAO:0000131] comment: Examples of appendicular ossicles include the patella and meniscus of the knee joint. synonym: "ossicle of appendicular skeleton" EXACT [OBOL:automatic] xref: VSAO:0000131 xref: XAO:0004194 relationship: part_of UBERON:0002091 ! appendicular skeleton [Term] id: UBERON:0011187 name: ventral tubercle of humerus namespace: uberon def: "The greater tubercle of the humerus is situated lateral to the head of the humerus and posteriolateral to the lesser tubercle. Its upper surface is rounded and marked by three flat impressions. the highest of these gives ('superior facet') insertion to the Supraspinatus the middle ('middle facet') to the Infraspinatus. the lowest one ('inferior facet'), and the body of the bone for about 2.5 cm. below it, to the Teres minor. The lateral surface of the greater tubercle is convex, rough, and continuous with the lateral surface of the body. Between the greater tubercle and the lesser tubercle is the intertubercular sulcus (bicipital groove)." [Wikipedia:Greater_tubercle] synonym: "greater tubercle" EXACT [FMA:23390] synonym: "greater tubercle of humerus" EXACT [FMA:23390] synonym: "greater tubercle of the humerus" RELATED [Wikipedia:Greater_tubercle] synonym: "greater tuberosity" RELATED [Wikipedia:Greater_tubercle] synonym: "greater tuberosity of humerus" EXACT [FMA:23390] synonym: "tuberculum majus" EXACT OMO:0003011 [FMA:TA] synonym: "tuberculum majus humeri" EXACT [Wikipedia:Greater_tubercle] xref: FMA:23390 xref: NCIT:C32700 xref: SCTID:181934009 xref: UMLS:C1512275 {source="ncithesaurus:Greater_Tuberosity"} xref: Wikipedia:Greater_tubercle relationship: part_of UBERON:0004411 {source="FMA"} ! proximal epiphysis of humerus property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray326.png" xsd:anyURI [Term] id: UBERON:0011188 name: lesser tubercle of humerus namespace: uberon def: "The lesser tubercle of the humerus, although smaller, is more prominent than the greater tubercle: it is situated in front, and is directed medially and anteriorly. Above and in front it presents an impression for the insertion of the tendon of the Subscapularis." [Wikipedia:Lesser_tubercle] subset: human_reference_atlas synonym: "lesser tubercle" EXACT [FMA:23393] synonym: "lesser tubercle of humerus" RELATED [Wikipedia:Lesser_tubercle] synonym: "lesser tubercle of the humerus" RELATED [Wikipedia:Lesser_tubercle] synonym: "lesser tuberosity of humerus" EXACT [FMA:23393] synonym: "tuberculum minus" EXACT OMO:0003011 [FMA:TA] xref: FMA:23393 xref: NCIT:C32983 xref: SCTID:181935005 xref: UMLS:C0223687 {source="ncithesaurus:Lesser_Tuberosity"} xref: Wikipedia:Lesser_tubercle relationship: part_of UBERON:0004411 {source="FMA"} ! proximal epiphysis of humerus property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/3/31/Tuberculumminushumeri.png" xsd:anyURI property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0011205 name: carpometacarpus namespace: uberon def: "The carpometacarpus is the fusion of the carpal and metacarpal bone, essentially a single fused bone between the wrist and the knuckles. It is a smallish bone in most birds, generally flattened and with a large hole in the middle. In flightless birds, however, its shape may be slightly different, or it might be absent entirely." [Wikipedia:Carpometacarpus] synonym: "carpometacarpus bone" EXACT [] xref: Wikipedia:Carpometacarpus is_a: UBERON:0005897 ! manus bone relationship: part_of UBERON:0001442 ! skeleton of manus [Term] id: UBERON:0011216 name: organ system subdivision namespace: uberon def: "A subdivision of an anatomical system." [http://orcid.org/0000-0002-6601-2165] subset: common_anatomy subset: human_reference_atlas subset: upper_level xref: FBbt:00007330 {mapping:justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} xref: FMA:67509 xref: SCTID:91690000 is_a: UBERON:0010000 {source="FBbt"} ! multicellular anatomical structure property_value: RO:0002175 NCBITaxon:33090 property_value: RO:0002175 NCBITaxon:33208 property_value: RO:0002175 NCBITaxon:4751 property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0011246 name: procoracoid bone namespace: uberon synonym: "anterior coracoid" RELATED [ISBN:0073040584] synonym: "anterior coracoid bone" RELATED [ISBN:0073040584] synonym: "precoracoid" RELATED [] synonym: "precoracoid bone" RELATED [ISBN:0073040584] synonym: "procoracoid" RELATED [] synonym: "procoracoid process" NARROW [] is_a: UBERON:0007829 ! pectoral girdle bone is_a: UBERON:0011248 ! procoracoid element property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://xmlns.com/foaf/0.1/depiction "https://upload.wikimedia.org/wikipedia/commons/7/79/P.gigas_forelimb.jpg" xsd:anyURI property_value: IAO:0000116 "VSAO sais that the procoracoid+coracoid are homologous to the teleost coracoid. Consider adding a separate class for posterior coracoid." xsd:string property_value: seeAlso "https://github.com/obophenotype/uberon/issues/119" xsd:anyURI property_value: UBPROP:0000003 "Kardong states that the procoracoid (or the anterior part of the procoracoid) is homologous to the coracoid, but this is controversial" xsd:string {is_about="UBERON:0004743", source="ISBN:0073040584"} property_value: UBPROP:0000008 "In primitive synapsis 3 centers develop in the shoulder: the dorsal center gives rise to the scapula and the two ventral centers produce an anterior coracoid (procoracoid) and posterior coracoid (coracoid)" xsd:string [Term] id: UBERON:0011247 name: procoracoid cartilage namespace: uberon is_a: UBERON:0011248 ! procoracoid element [Term] id: UBERON:0011248 name: procoracoid element namespace: uberon def: "Endochondral element of pectoral girdle, positioned posterior to the clavicle and anterior to the coracoid." [https://github.com/obophenotype/uberon/issues/104] synonym: "anterior coracoid" RELATED [ISBN:0073040584] synonym: "precoracoid" RELATED [AAO:0000760, ISBN:0073040584] synonym: "procoracoid" EXACT [AAO:0000760] xref: AAO:0000760 relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly property_value: UBPROP:0000001 "Cartilaginous, paired structures located on the anterolateral portions of the zonal area of the pectoral girdle.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000760", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000002 "relationship loss: part_of zonal element (AAO:0000936)[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000760", ontology="AAO"} [Term] id: UBERON:0011250 name: autopod bone namespace: uberon def: "A bone that is part of a autopod region. Note that this incudes the carpal and tarsal bones." [https://orcid.org/0000-0002-6601-2165] is_a: UBERON:0002428 ! limb bone is_a: UBERON:0015063 ! autopod endochondral element property_value: UBPROP:0000006 "https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern" xsd:anyURI [Term] id: UBERON:0011575 name: styloid process of ulna namespace: uberon def: "The styloid process of the ulna projects from the medial and back part of the bone; it descends a little lower than the head, and its rounded end affords attachment to the ulnar collateral ligament of the wrist[WP,unvetted]." [Wikipedia:Ulnar_styloid_process] subset: human_reference_atlas subset: pheno_slim synonym: "processus styloideus ulnae" EXACT OMO:0003011 [FMA:TA, Wikipedia:Ulnar_styloid_process] synonym: "ulnar styloid process" EXACT [FMA:23628] xref: FMA:23628 xref: SCTID:181952009 xref: Wikipedia:Ulnar_styloid_process relationship: part_of UBERON:0004408 {source="FMA"} ! distal epiphysis of ulna property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0011582 name: paired limb/fin skeleton namespace: uberon def: "The collection of all skeletal elements in an individual limb or fin." [https://orcid.org/0000-0002-6601-2165] subset: homology_grouping synonym: "limb/fin skeleton" EXACT [VSAO:0000301] synonym: "skeletal parts of limb/fin" EXACT [] synonym: "skeleton of limb/fin" EXACT [] xref: VSAO:0000301 is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton property_value: UBPROP:0000001 "Skeletal subdivision that is part of the paired limb/fin.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0000301", ontology="VSAO", source="GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070"} [Term] id: UBERON:0011583 name: stylopodial skeleton namespace: uberon def: "Proximal element of a free limb skeleton consisting of the femur and humerus in the forelimb stylopodium and hindlimb stylopodium respectively[VSAO, modified]." [VSAO:0005007] synonym: "mesomere 1" RELATED HOMOLOGY [ISBN:0226313409] synonym: "propodial skeleton" RELATED [] synonym: "propodium" RELATED [VSAO:0005007] synonym: "proximal metapterygial mesomere" RELATED HOMOLOGY [ISBN:0226313409] synonym: "stylopod" RELATED [VSAO:0005007] synonym: "stylopodium" RELATED [] synonym: "stylopodium skeleton" EXACT [] xref: VSAO:0005007 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0004381 {source="VSAO"} ! skeleton of limb property_value: UBPROP:0000001 "Proximal element of the limb skeleton consisting of the femur and humerus in the forelimb stylopodium and hindlimb stylopodium respectively.[VSAO]" xsd:string {date_retrieved="2012-08-14", external_class="VSAO:0005007", ontology="VSAO", source="VSAO:NI"} property_value: UBPROP:0000007 "propodial" xsd:string property_value: UBPROP:0000007 "stylopodial" xsd:string [Term] id: UBERON:0011584 name: zeugopodial skeleton namespace: uberon def: "Section of the forelimb skeleton located between the stylopodium and the autopodium." [VSAO:0005010] synonym: "epipodial skeleton" EXACT [] synonym: "epipodium" RELATED [VSAO:0005010] synonym: "mesomere 2" RELATED HOMOLOGY [ISBN:0226313409] synonym: "mesomere 2 skeleton" RELATED HOMOLOGY [ISBN:0226313409] synonym: "skeleton of zeugopod" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "zeugopod skeleton" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "zygopodium" RELATED [VSAO:0005010] xref: VSAO:0005010 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0004381 {source="VSAO"} ! skeleton of limb property_value: UBPROP:0000007 "zeugopodial" xsd:string property_value: UBPROP:0000007 "zygopodial" xsd:string [Term] id: UBERON:0011655 name: interclavicle namespace: uberon def: "Dermal bone of pectoral girdle that is median and ventral in position." [GO_REF:0000034, http://dx.plos.org/10.1371/journal.pone.0051070, VSAO:0000161] synonym: "interclavicle bone" EXACT [http://orcid.org/0000-0002-6601-2165] xref: VSAO:0000161 xref: Wikipedia:Interclavicle is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 {source="VSAO"} ! pectoral girdle skeleton property_value: IAO:0000116 "See discussion on pectoral girdles - change relationship to overlaps? Kardong: enlarged oval scale" xsd:string property_value: RO:0002161 NCBITaxon:32525 property_value: RO:0002175 NCBITaxon:9257 property_value: UBPROP:0000008 "Present in therapids and monotremes, reduced in size in marsupials and placentals. In birds, the interclavicle is fused with the clavicles to form the furcula (wishbone); the furcula forms a 'Y' shape and the interclavicle is the stem of the 'Y'." xsd:string [Term] id: UBERON:0011678 name: hindlimb intermedium bone namespace: uberon def: "A proximal tarsal bone that articulates with the fibula." [http://orcid.org/0000-0002-6601-2165] synonym: "hidlimb intermedium" EXACT [] synonym: "intermedium" BROAD [http://orcid.org/0000-0002-6601-2165] synonym: "intermedium (hind)" EXACT [AAO:0000923] synonym: "intermedium of pes" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "pedal intermedium" EXACT [http://orcid.org/0000-0002-6601-2165] xref: AAO:0000923 is_a: UBERON:0011679 ! proximal tarsal bone property_value: UBPROP:0000008 "The amphibian intermedium forms part of the astragalus in amniotes[http://www.science.marshall.edu/okeefef/PDFS/OKeefe_et_al_2006_JMorph.pdf]" xsd:string [Term] id: UBERON:0011679 name: proximal tarsal bone namespace: uberon def: "A tarsal bone that connected_to a hindlimb zeugopod skeleton." [OBOL:automatic] is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0014395 ! proximal mesopodial bone is_a: UBERON:0015081 ! proximal tarsal endochondral element [Term] id: UBERON:0011941 name: lateral angle of scapula namespace: uberon def: "An angle of the scapula that is broad and bears the glenoid cavity or fossa[WP,unvetted]." [Wikipedia:Lateral_angle_of_scapula] synonym: "angulus lateralis (scapula)" EXACT [FMA:23249] synonym: "angulus lateralis scapulae" EXACT OMO:0003011 [Wikipedia:Lateral_angle_of_scapula] synonym: "glenoid angle of scapula" RELATED [Wikipedia:Lateral_angle_of_scapula] synonym: "head of scapula" RELATED [Wikipedia:Lateral_angle_of_scapula] synonym: "scapular head" RELATED [FMA:23249] xref: FMA:23249 xref: Wikipedia:Lateral_angle_of_scapula is_a: UBERON:0007172 {source="EMAPA-modified"} ! angle of scapula [Term] id: UBERON:0011959 name: glenoid labrum of scapula namespace: uberon def: "A ring of fibrocartilage attached to the margin of the glenoid cavity of the scapula." [http://www.medilexicon.com/medicaldictionary.php?t=47475, Wikipedia:Glenoid_labrum] synonym: "glenoid labrum" BROAD [] synonym: "glenoidal labrum" BROAD [] synonym: "glenoidal labrum of glenohumeral joint" EXACT [] synonym: "glenoidal labrum of scapula" EXACT [] synonym: "labrum glenoidale" EXACT OMO:0003011 [] synonym: "labrum glenoidale scapulae" RELATED [http://www.medilexicon.com/medicaldictionary.php?t=47475] xref: FMA:23290 xref: SCTID:182391008 relationship: part_of UBERON:0001470 {source="FMA"} ! glenohumeral joint property_value: IAO:0000116 "consider classifying as 'annulus fibrosus'" xsd:string [Term] id: UBERON:0011960 name: articular capsule of glenohumeral joint namespace: uberon def: "An articular capsule that is part of the glenohumeral joint." [http://orcid.org/0000-0002-6601-2165] synonym: "articular capsule of humerus" EXACT [Wikipedia:Articular_capsule_of_the_humerus] synonym: "articular capsule of shoulder joint" EXACT [] synonym: "capsule of shoulder joint" EXACT [FMA:34944] synonym: "fibrous capsule of glenohumeral joint" EXACT [FMA:34944] synonym: "glenohumeral joint capsule" RELATED [FMA:34944] xref: FMA:34944 xref: SCTID:361836001 xref: Wikipedia:Articular_capsule_of_the_humerus relationship: part_of UBERON:0001470 ! glenohumeral joint [Term] id: UBERON:0011973 name: epiphysis of phalanx of pes namespace: uberon def: "An epiphysis that is part of a phalanx of a pes [Automatically generated definition]." [OBOL:automatic] synonym: "epiphysis of phalanx of toe" EXACT [] xref: SCTID:314621001 is_a: UBERON:0001437 ! epiphysis [Term] id: UBERON:0011974 name: epiphysis of proximal phalanx of pes namespace: uberon def: "An epiphysis that is part of a proximal phalanx of pes." [OBOL:automatic] synonym: "epiphysis of proximal phalanx of toe" EXACT [] xref: SCTID:280047006 is_a: UBERON:0004446 ! epiphysis of phalanx is_a: UBERON:0011973 ! epiphysis of phalanx of pes relationship: part_of UBERON:0003868 ! proximal phalanx of pes [Term] id: UBERON:0011975 name: epiphysis of middle phalanx of pes namespace: uberon def: "An epiphysis that is part of a middle phalanx of pes." [OBOL:automatic] synonym: "epiphysis of middle phalanx of toe" EXACT [] xref: SCTID:280048001 is_a: UBERON:0004446 ! epiphysis of phalanx is_a: UBERON:0011973 ! epiphysis of phalanx of pes relationship: part_of UBERON:0003866 ! middle phalanx of pes [Term] id: UBERON:0011976 name: epiphysis of distal phalanx of pes namespace: uberon def: "An epiphysis that is part of a distal phalanx of pes." [OBOL:automatic] synonym: "epiphysis of distal phalanx of toe" EXACT [] xref: SCTID:280049009 is_a: UBERON:0004446 ! epiphysis of phalanx is_a: UBERON:0011973 ! epiphysis of phalanx of pes relationship: part_of UBERON:0003867 ! distal phalanx of pes [Term] id: UBERON:0011977 name: epiphysis of proximal phalanx of manus namespace: uberon def: "An epiphysis that is part of a proximal phalanx of manus." [OBOL:automatic] subset: pheno_slim synonym: "epiphysis of proximal phalanx of finger" EXACT [] xref: SCTID:280044004 is_a: UBERON:0004387 ! epiphysis of phalanx of manus relationship: part_of UBERON:0002234 ! proximal phalanx of manus [Term] id: UBERON:0011978 name: epiphysis of middle phalanx of manus namespace: uberon def: "An epiphysis that is part of a middle phalanx of manus." [OBOL:automatic] synonym: "epiphysis of middle phalanx of finger" EXACT [] xref: SCTID:280045003 is_a: UBERON:0004387 ! epiphysis of phalanx of manus relationship: part_of UBERON:0003864 ! middle phalanx of manus [Term] id: UBERON:0011979 name: epiphysis of distal phalanx of manus namespace: uberon def: "An epiphysis that is part of a distal phalanx of manus." [OBOL:automatic] synonym: "epiphysis of distal phalanx of finger" EXACT [] xref: FMA:321561 xref: SCTID:280046002 is_a: UBERON:0004387 ! epiphysis of phalanx of manus relationship: part_of UBERON:0003865 ! distal phalanx of manus [Term] id: UBERON:0012078 name: fovea capitis of femur namespace: uberon def: "The surface of the head of the femur is smooth, coated with cartilage in the fresh state, except over an ovoid depression, the fovea of head of femur, which is situated a little below and behind the center of the head, and gives attachment to the ligamentum teres." [Wikipedia:Fovea_of_head_of_femur] synonym: "fovea capitis" BROAD [Wikipedia:Fovea_of_head_of_femur] synonym: "fovea capitis femoris" EXACT OMO:0003011 [Wikipedia:Fovea_of_head_of_femur] synonym: "fovea capitis femoris (caput femoris)" EXACT [FMA:43700] synonym: "fovea capitis of femoral head" EXACT [] synonym: "fovea for ligament of head of femur" EXACT [FMA:43700] synonym: "fovea of head of femur" RELATED [Wikipedia:Fovea_of_head_of_femur] xref: FMA:43700 xref: Wikipedia:Fovea_of_head_of_femur is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004412 ! proximal epiphysis of femur property_value: RO:0002161 NCBITaxon:9709 [Term] id: UBERON:0012080 name: patella cartilage element namespace: uberon def: "A cartilaginous condensation that has the potential to develop into a patella." [OBOL:automatic] xref: EMAPA:19140 relationship: part_of UBERON:0001441 ! hindlimb skeleton property_value: IAO:0000116 "Note some sources have this as intramembranous" xsd:string [Term] id: UBERON:0012081 name: patella pre-cartilage condensation namespace: uberon def: "A pre-cartilage condensation that has the potential to develop into a patella." [OBOL:automatic] xref: EMAPA:18510 relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0012104 name: sesamoid bone of the peroneus longus muscle namespace: uberon comment: a coffee bean-shaped constant, large and regular bone. The lateral surface of the bone is convex in all directions and non-articular. The medial surface is covered with hyaline cartilage and articulates by means of a synovial joint with the corresponding facet of the cuboid bone. The histological structure and the mode of ossification of the os peroneum are identical to that of other short bones of the skeleton. synonym: "os peroneum" EXACT [PMCID:PMC1261702] is_a: UBERON:0004251 ! hindlimb zeugopod bone is_a: UBERON:0011141 ! appendicular ossicle [Term] id: UBERON:0012124 name: avian scapholunar bone namespace: uberon comment: May correspond to radiale[Origin and evolution of birds, Feduccia] synonym: "radiale" RELATED [] synonym: "scapholunar" RELATED [] is_a: UBERON:0001480 ! proximal carpal bone [Term] id: UBERON:0012126 name: fibulare namespace: uberon def: "One of two elements that constitute the basal row of tarsals. The fibulare constitutes the preaxial element[AAO]." [AAO:0000913] synonym: "astragalus" RELATED [AAO:0000913] xref: AAO:0000913 is_a: UBERON:0011679 ! proximal tarsal bone relationship: part_of UBERON:0009879 {source="AAO"} ! tarsal skeleton property_value: UBPROP:0000001 "One of two element that constitute the basal row of tarsals. The fibulare constitutes the preaxial element. In salamanders this element is aproximatelly rounded, whereas in anurans it is an elongate, cylindrical bone with the proximal and distal heads fused to the heads of the tibiale.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0000913", ontology="AAO", source="AAO:LAP"} property_value: UBPROP:0000008 "In salamanders this element is aproximatelly rounded, whereas in anurans it is an elongate, cylindrical bone with the proximal and distal heads fused to the heads of the tibiale" xsd:string {source="AAO"} [Term] id: UBERON:0012129 name: radial head of humerus namespace: uberon def: "Hemispherical ball located at the lower end of the humerus that stands out prominently from the surrounding structures toward the flexor surface of the forelimb." [AAO:LAP, PHENOSCAPE:curators] synonym: "capitellum" RELATED [] synonym: "capitellum of humerus" EXACT [] synonym: "eminentia capitata" RELATED [AAO:0000838] synonym: "radial condyle" RELATED [AAO:0000838] synonym: "radial condyle of humerus" EXACT [] xref: AAO:0000838 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004404 ! distal epiphysis of humerus property_value: UBPROP:0000001 "Hemispherical ball located at the lower end of the humerus that stands out prominently from the surrounding structures toward the flexor surface of the forelimb and fits into the socket joint of the olecranon process[AAO]." xsd:string {external_class="AAO:0000838", ontology="AAO", source="AAO:LAP"} [Term] id: UBERON:0012130 name: olecranon fossa namespace: uberon def: "A deep evacuation in the bone, into which the anconeal process of the ulna passes when the elbow joint is extended." [MURDOCH:894] synonym: "fossa olecrani" EXACT OMO:0003011 [Wikipedia:Olecranon_fossa] xref: FMA:23450 xref: Wikipedia:Olecranon_fossa is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004404 ! distal epiphysis of humerus [Term] id: UBERON:0012131 name: centrale namespace: uberon def: "Endochondral bone located between the proximal and distal rows of carpals or tarsals and thus representing the central carpals or tarsals[PHENOSCAPE]." [https://github.com/obophenotype/uberon/issues/124, PHENOSCAPE:AMAO] synonym: "central mesopodium bone" EXACT [] synonym: "centralia" RELATED OMO:0003004 [] synonym: "os centrale" EXACT [FMA:77232] xref: EMAPA:36170 xref: FMA:77232 is_a: UBERON:0003656 ! mesopodium bone is_a: UBERON:0015067 ! centrale endochondral element property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: IAO:0000232 "This term corresponds both to the navicular bone in the pes and the similar central carpals in the manus" xsd:string property_value: UBPROP:0000012 "the FMA term is under 'general anatomical term'." xsd:string {external_ontology="FMA"} [Term] id: UBERON:0012135 name: prepollex skeleton namespace: uberon comment: A prepollex does not contain phalanges nor does it articulate with a metacarpal. It articulates with elements of the carpal (wrist) skeleton[AAO:DB]. editor note: TODO add articulation relations synonym: "cartilago pre-pollicis" RELATED [AAO:0000852] synonym: "prepollex" BROAD [AAO:0000852] xref: AAO:0000852 is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0009880 {source="AAO"} ! carpal skeleton [Term] id: UBERON:0012150 name: skeleton of digitopodium namespace: uberon def: "A subdivision of the autopod skeleton consisting of both acropodial skeleon and metapodial skeleton, but excluding the mesopodial/basopodial skeleton." [PHENOSCAPE:ni] synonym: "digitopodium" RELATED [PHENOSCAPE:ni] synonym: "skeleton of digits" RELATED COMPARATIVE_PREFERRED [] is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0006717 ! autopodial skeleton property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod" xsd:anyURI property_value: UBPROP:0000013 "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod" xsd:string [Term] id: UBERON:0012151 name: skeleton of manual digitopodium namespace: uberon def: "A subdivision of the manus skeleton consisting of both manual acropodial skeleton and metacarpal skeleton, but excluding the carpal skeleton." [https://orcid.org/0000-0002-6601-2165, PHENOSCAPE:ni] synonym: "manual digitopodium" RELATED [] is_a: UBERON:0012150 ! skeleton of digitopodium relationship: part_of UBERON:0001442 ! skeleton of manus property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod" xsd:anyURI property_value: UBPROP:0000013 "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod" xsd:string [Term] id: UBERON:0012152 name: skeleton of pedal digitopodium namespace: uberon def: "A subdivision of the pes skeleton consisting of both pedal acropodial skeleton and metatarsal skeleton, but excluding the tarsal skeleton." [https://orcid.org/0000-0002-6601-2165, PHENOSCAPE:ni] synonym: "pedal digitopodium" RELATED [] is_a: UBERON:0012150 ! skeleton of digitopodium relationship: part_of UBERON:0001445 ! skeleton of pes property_value: seeAlso "https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod" xsd:anyURI property_value: UBPROP:0000013 "some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod" xsd:string [Term] id: UBERON:0012267 name: equine splint bone namespace: uberon def: "The splint bones sit either side of the equine cannon bone. Homologous to metapodium bones 2 or 4." [http://orcid.org/0000-0002-6601-2165] synonym: "metapodial bone 2 or 4" BROAD [] synonym: "splint bone" EXACT [NCBITaxon:9788] is_a: UBERON:0003821 ! metapodium bone property_value: IAO:0000116 "in future this class may be replaced by a more taxon-neutral class grouping metapodial bones 2 or 4" xsd:string [Term] id: UBERON:0012268 name: equine forelimb splint bone namespace: uberon def: "A splint bone in the metacarpal region." [http://orcid.org/0000-0002-6601-2165] synonym: "forelimb splint bone" EXACT [NCBITaxon:9788] synonym: "metacarpal bone 2 or 4" BROAD [] is_a: UBERON:0003607 ! forelimb long bone is_a: UBERON:0012267 ! equine splint bone is_a: UBERON:0012358 ! manual digitopodium bone property_value: IAO:0000116 "in future this class may be replaced by a more taxon-neutral class grouping metarsal bones 2 or 4" xsd:string [Term] id: UBERON:0012269 name: equine hindlimb splint bone namespace: uberon def: "A splint bone in the metatarsal region." [http://orcid.org/0000-0002-6601-2165] synonym: "hindlimb splint bone" EXACT [NCBITaxon:9788] synonym: "metatarsal bone 2 or 4" BROAD [] is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0012267 ! equine splint bone is_a: UBERON:0012359 ! pedal digitopodium bone property_value: IAO:0000116 "in future this class may be replaced by a more taxon-neutral class grouping metacarpal bones 2 or 4" xsd:string [Term] id: UBERON:0012288 name: centroquartal bone namespace: uberon def: "A tarsal bone that is formed from the fusion of the central and 4th tarsal bones." [UBERON:skansa] synonym: "os centroquartale" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "os naviculocuboideum" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] is_a: UBERON:0001447 ! tarsal bone [Term] id: UBERON:0012289 name: fused tarsal bones 2 and 3 namespace: uberon def: "A tarsal bone that is formed from the fusion of the 2nd and 3rd tarsal bones." [UBERON:skansa] synonym: "fused tarsals 2 and 3" EXACT [] synonym: "os cuneiforme intermediolaterale" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "os tarsale II et III" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "tarsals 2+3" RELATED [] is_a: UBERON:0010721 ! distal tarsal bone [Term] id: UBERON:0012290 name: fused carpal bones 2 and 3 namespace: uberon def: "A carpal bone that is formed from the fusion of the 2nd and 3rd distal carpal bones." [UBERON:skansa] synonym: "carpals 2+3" RELATED [] synonym: "fused carpals 2 and 3" EXACT [] is_a: UBERON:0001481 ! distal carpal bone [Term] id: UBERON:0012291 name: lateral malleolus of fibula namespace: uberon def: "Malleolus is the name for the bony prominence on each side of the ankle." [Wikipedia:Malleolus] subset: human_reference_atlas synonym: "distal extremity of fibula" RELATED [Wikipedia:Malleolus#Lateral_malleolus] synonym: "external malleolus of fibula" RELATED [Wikipedia:Malleolus#Lateral_malleolus] synonym: "fibular malleolus" RELATED [] synonym: "lateral malleolus" BROAD [FMA:35502] synonym: "malleolar bone" NARROW SENSU [] synonym: "malleolar bone of ankle" NARROW SENSU [] xref: EMAPA:37893 {source="MA:th"} xref: FMA:35502 xref: SCTID:361795009 xref: Wikipedia:Malleolus is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004410 ! distal epiphysis of fibula property_value: RO:0002175 NCBITaxon:9606 property_value: UBPROP:0000008 "In bovids, the distal end of the fibula is present only as the lateral malleolus, a separate bone that articulates with the lateral side of the distal tibia." xsd:string {scope="NCBITaxon:9895", source="UBERON:skansa", seeAlso="UBERON:0004410"} [Term] id: UBERON:0012357 name: digitopodium bone namespace: uberon def: "A bone that is part of a the digitopodium skeleton - i.e. the acropodial skeleton or the metapodial skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "digit bone" RELATED COMPARATIVE_PREFERRED [] is_a: UBERON:0011250 ! autopod bone relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: UBPROP:0000006 https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern [Term] id: UBERON:0012358 name: manual digitopodium bone namespace: uberon def: "A bone that is part of a the manual digitopodium skeleton - i.e. the fingers or the metacarpal skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "bone of forelimb digitopodium" EXACT [] xref: SCTID:265809008 is_a: UBERON:0005897 ! manus bone is_a: UBERON:0012357 ! digitopodium bone relationship: part_of UBERON:0012151 ! skeleton of manual digitopodium property_value: UBPROP:0000006 https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern [Term] id: UBERON:0012359 name: pedal digitopodium bone namespace: uberon def: "A bone that is part of a the pedal digitopodium skeleton - i.e. the toes or the metatarsal skeleton." [https://orcid.org/0000-0002-6601-2165] synonym: "bone of hindlimb digitopodium" EXACT [] is_a: UBERON:0005899 ! pes bone is_a: UBERON:0012357 ! digitopodium bone relationship: part_of UBERON:0012152 ! skeleton of pedal digitopodium property_value: UBPROP:0000006 https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern [Term] id: UBERON:0012475 name: skeleton of pectoral complex namespace: uberon def: "The collection of all skeletal elements in a pectoral complex - i.e. the combination of free limb or fin plus pectoral girdle." [https://orcid.org/0000-0002-6601-2165] subset: pheno_slim synonym: "bones of upper limb" RELATED [FMA:24139] synonym: "ossa membri superioris" RELATED [FMA:TA] synonym: "pectoral complex skeleton" RELATED [https://orcid.org/0000-0002-6601-2165] synonym: "set of bones of upper limb" RELATED [FMA:24139] synonym: "skeleton of anterior limb/fin and girdle" RELATED [https://orcid.org/0000-0002-6601-2165] synonym: "upper limb skeleton" RELATED [FMA:24139] xref: FMA:24139 is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton [Term] id: UBERON:0012476 name: skeleton of pelvic complex namespace: uberon def: "The collection of all skeletal elements in a pelvic complex - i.e. the combination of free limb or fin plus pelvic girdle." [https://orcid.org/0000-0002-6601-2165] subset: pheno_slim synonym: "bones of lower limb" RELATED [FMA:24140] synonym: "lower limb skeleton" RELATED [FMA:24140] synonym: "ossa membri inferioris" RELATED [FMA:TA] synonym: "pelvic complex skeleton" RELATED [https://orcid.org/0000-0002-6601-2165] synonym: "set of bones of lower limb" RELATED [FMA:24140] synonym: "skeleton of posterior limb/fin and girdle" RELATED [https://orcid.org/0000-0002-6601-2165] xref: FMA:24140 is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton [Term] id: UBERON:0013069 name: popliteal area namespace: uberon def: "A depression on the ventral side of the femur, at the knee joint, between the condyles." [http://orcid.org/0000-0002-6601-2165] synonym: "knee pit" RELATED [Wikipedia:Popliteal_fossa] synonym: "popliteal fossa" EXACT [FMA:22525] synonym: "popliteal region" RELATED [] synonym: "popliteal space" RELATED [] xref: FMA:22525 xref: http://palaeos.com/vertebrates/glossary/images/popliteal.gif xref: NCIT:C103222 xref: SCTID:362791002 xref: Wikipedia:Popliteal_fossa is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:0013121 name: proximal epiphysis of phalanx of pes namespace: uberon synonym: "basal epiphysis of phalanx of foot" EXACT [FMA:32888] synonym: "base of phalanx of foot" EXACT [FMA:32888] synonym: "basis phalangis (pedis)" EXACT [FMA:32888] synonym: "basis phalangis pedis" EXACT [FMA:TA] synonym: "proximal epiphysis of phalanx of toe" EXACT [FMA:32888] xref: FMA:32888 is_a: UBERON:0004447 ! proximal epiphysis of phalanx is_a: UBERON:0011973 ! epiphysis of phalanx of pes relationship: part_of UBERON:0001449 ! phalanx of pes [Term] id: UBERON:0013122 name: distal epiphysis of phalanx of pes namespace: uberon synonym: "caput phalangis (pedis)" EXACT [FMA:32890] synonym: "caput phalangis pedis" EXACT [FMA:TA] synonym: "distal end of phalanx of foot" EXACT [FMA:32890] synonym: "distal epiphysis of phalanx of toe" EXACT [FMA:32890] synonym: "head of phalanx of foot" EXACT [FMA:32890] synonym: "ungual tuberosity of distal phalanx of toe" RELATED [FMA:32890] xref: FMA:32890 xref: SCTID:236801009 is_a: UBERON:0004448 ! distal epiphysis of phalanx is_a: UBERON:0011973 ! epiphysis of phalanx of pes relationship: part_of UBERON:0001449 ! phalanx of pes [Term] id: UBERON:0013204 name: epipubic bone namespace: uberon def: "One of a pair of bones running antero-laterally from the centre of the pubis in marsupials and some other mammals." [http://orcid.org/0000-0002-6601-2165] synonym: "marsupial bone" NARROW [] xref: Wikipedia:Epipubic_bone is_a: UBERON:0007830 {source="cjm"} ! pelvic girdle bone/zone property_value: http://xmlns.com/foaf/0.1/depiction "http://upload.wikimedia.org/wikipedia/commons/4/4c/Macropus_major_hind_legs.png" xsd:anyURI property_value: RO:0002161 NCBITaxon:314146 property_value: UBPROP:0000001 "Epipubic bones are a pair of bones projecting forward from the pelvic bones of modern marsupials and of some fossil mammals: multituberculates, monotremes, and even basal eutherians (the ancestors of placental mammals). In modern marsupials the epipubic bones are often called 'marsupial bones' because they support the mother's pouch ('marsupium' is Latin for 'pouch'), but their presence on other groups of mammals indicates that this was not their original function, which some researchers think was to assist locomotion by supporting some of the muscles that flex the thigh. The epipubic bones were first described in 1698 but their functions have remained unresolved. It has been suggested that they form part of a kinetic linkage stretching from the femur on one side to the ribs on the opposite side. This linkage is formed by a series of muscles: each epipubic bone is connected to the femur by the pectineus muscle, and to the ribs and vertebrae by the pyramidalis, rectus abdominis, and external and internal obliques. According to this hypothesis, the epipubic bones act as levers to stiffen the trunk during locomotion[Wikipedia:Epipubic_bone]." xsd:string {source="Wikipedia:Epipubic_bone"} property_value: UBPROP:0000007 "epipubic" xsd:string [Term] id: UBERON:0013207 name: entepicondylar foramen namespace: uberon def: "A canal through the medial epicondyle at the distal end of the vertebrate humerus, usually traversed by the median nerve and brachial artery." [http://www.jstor.org/discover/10.2307/2422468] xref: Wikipedia:Entepicondylar_foramen relationship: part_of UBERON:0004404 ! distal epiphysis of humerus property_value: RO:0002161 NCBITaxon:91561 property_value: RO:0002161 NCBITaxon:9365 property_value: RO:0002161 NCBITaxon:9397 property_value: RO:0002161 NCBITaxon:9604 property_value: RO:0002161 NCBITaxon:9721 property_value: RO:0002161 NCBITaxon:9975 property_value: RO:0002175 NCBITaxon:376911 property_value: RO:0002175 NCBITaxon:37887 property_value: RO:0002175 NCBITaxon:38624 property_value: RO:0002175 NCBITaxon:9255 property_value: RO:0002175 NCBITaxon:9265 property_value: RO:0002175 NCBITaxon:9322 property_value: RO:0002175 NCBITaxon:9338 property_value: RO:0002175 NCBITaxon:9363 property_value: RO:0002175 NCBITaxon:9369 property_value: RO:0002175 NCBITaxon:9376 property_value: RO:0002175 NCBITaxon:9681 property_value: RO:0002175 NCBITaxon:9709 property_value: UBPROP:0000008 "It is often present in primitive placentals, such as the enigmatic Madagascan Plesiorycteropus. In most Neotominae and all Tylomyinae among cricetid rodents, it is located above the medial epicondyle of the humerus, but it is absent in all Sigmodontinae and Arvicolinae and this trait has been suggested as a synapomorphy for the former subfamily.[WP]" xsd:string property_value: UBPROP:0000008 "Primitive amniote feature found in primitive reptil-like amphibians (Romeer) [http://www.jstor.org/discover/10.2307/2422468]" xsd:string [Term] id: UBERON:0013279 name: diaphysis of fibula namespace: uberon def: "A diaphysis that is part of a fibula[Automatically generated definition]." [OBOL:automatic, Wikipedia:Body_of_fibula] synonym: "body of fibula" EXACT [FMA:33738] synonym: "corpus fibulae" EXACT [FMA:TA] synonym: "fibula diaphysis" EXACT [FMA:33738] synonym: "shaft of fibula" EXACT [FMA:33738] xref: EMAPA:37892 {source="MA:th"} xref: FMA:33738 xref: SCTID:302528006 xref: Wikipedia:Body_of_fibula is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0001446 ! fibula property_value: UBPROP:0000001 "The body of fibula presents four borders - the antero-lateral, the antero-medial, the postero-lateral, and the postero-medial; and four surfaces - anterior, posterior, medial, and lateral[Wikipedia:Body_of_fibula]." xsd:string {source="Wikipedia:Body_of_fibula"} [Term] id: UBERON:0013280 name: diaphysis of tibia namespace: uberon def: "A diaphysis that is part of a tibia." [OBOL:automatic, Wikipedia:Body_of_tibia] synonym: "body of the tibia" RELATED [Wikipedia:Body_of_tibia] synonym: "body of tibia" EXACT [FMA:33125] synonym: "corpus tibiae" EXACT [FMA:TA] synonym: "shaft of tibia" EXACT [FMA:33125] synonym: "shaft of tibia" RELATED [Wikipedia:Body_of_tibia] synonym: "tibial diaphysis" EXACT [FMA:33125] xref: EMAPA:37770 {source="MA:th"} xref: FMA:33125 xref: MA:0003049 xref: SCTID:302525009 xref: Wikipedia:Body_of_tibia is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0000979 ! tibia property_value: UBPROP:0000001 "The body of the tibia has three borders and three surfaces[Wikipedia:Body_of_tibia]." xsd:string {source="Wikipedia:Body_of_tibia"} [Term] id: UBERON:0013581 name: metapodium bone 1 namespace: uberon def: "A metapodium bone that is part of a digit 1 plus metapodial segment." [OBOL:automatic] synonym: "metapodium 1" EXACT [] synonym: "metapodium I" EXACT [] is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:0013582 name: metapodium bone 2 namespace: uberon def: "A metapodium bone that is part of a digit 2 plus metapodial segment." [OBOL:automatic] synonym: "metapodium 2" EXACT [] synonym: "metapodium II" EXACT [] is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:0013583 name: metapodium bone 3 namespace: uberon def: "A metapodial bone that is associated with digit III." [http://orcid.org/0000-0002-6601-2165] synonym: "3rd metapodium bone" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "cannon bone" NARROW [NCBITaxon:9788, Wikipedia:Equine_forelimb_anatomy#Metacarpal_bones] synonym: "metapodial bone III" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "metapodium 3" EXACT [] synonym: "metapodium III" EXACT [] is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:0013584 name: metapodium bone 4 namespace: uberon def: "A metapodium bone that is part of a digit 4 plus metapodial segment." [OBOL:automatic] synonym: "metapodium 4" EXACT [] synonym: "metapodium IV" EXACT [] is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:0013585 name: metapodium bone 5 namespace: uberon def: "A metapodium bone that is part of a digit 5 plus metapodial segment." [OBOL:automatic] synonym: "metapodium 5" EXACT [] synonym: "metapodium V" EXACT [] is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:0013586 name: fused metapodial bones 3 and 4 namespace: uberon def: "An element formed from the fusion of metapodium 3 and metapodium 4 (i.e. either metatarsals 3 and 4 or metacarpals 3 and 4)." [http://orcid.org/0000-0001-7920-5321] synonym: "fused metapodials 3/4" EXACT [] synonym: "metapodial 3+4" RELATED [] synonym: "os metapodiale III et IV" EXACT OMO:0003011 [] is_a: UBERON:0003821 ! metapodium bone property_value: IAO:0000232 "this class can be used in annotation when it is unclear whether the element is a fusion of the metacarpal and metatarsal elements." xsd:string property_value: RO:0002175 NCBITaxon:91561 [Term] id: UBERON:0013587 name: fused metacarpal bones 3 and 4 namespace: uberon def: "An element formed from the fusion of metacarpal 3 and metacarpal 4." [http://orcid.org/0000-0001-7920-5321] synonym: "fused metacarpal 3/4" EXACT [] synonym: "metacarpal 3+4" RELATED [] synonym: "os metacarpale III et IV" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] is_a: UBERON:0002374 ! metacarpal bone is_a: UBERON:0013586 ! fused metapodial bones 3 and 4 property_value: UBPROP:0000008 "In many artiodactyls, the 3rd & 4th metapodials are fused, creating a main metapodial." xsd:string [Term] id: UBERON:0013588 name: fused metatarsal bones 3 and 4 namespace: uberon def: "An element formed from the fusion of metatarsal 3 and metatarsal 4." [http://orcid.org/0000-0001-7920-5321] synonym: "fused metatarsal 3/4" EXACT [] synonym: "metatarsal 3+4" RELATED [] synonym: "os metatarsale III et IV (Ru)" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:0013586 ! fused metapodial bones 3 and 4 property_value: UBPROP:0000008 "In many artiodactyls, the 3rd & 4th metapodials are fused, creating a main metapodial." xsd:string [Term] id: UBERON:0013633 name: intertrochanteric crest namespace: uberon def: "The intertrochanteric crest is a bony ridge located on the posterior side of the head of the femur, stretching obliquely downward and medially from the summit of the greater trochanter to the lesser trochanter." [Wikipedia:Intertrochanteric_crest] comment: Together with the intertrochanteric line on the anterior side of the head, the crest mark the transition between of the neck of femur into the shaft of femur. An elevation between the middle and proximal third of the crest is known as the quadrate tubercle. The upper half of the crest forms the posterior border of the greater trochanter. The distal capsular attachment on the femur follows the shape of the irregular rim between the head and the neck. As a consequence, the capsule of the hip joint attaches in the region of the intertrochanteric line on the anterior side, but a finger away from the intertrochanteric crest on the posterior side of the head xref: FMA:75100 xref: Wikipedia:Intertrochanteric_crest relationship: part_of UBERON:0004412 ! proximal epiphysis of femur [Term] id: UBERON:0013634 name: intertrochanteric line namespace: uberon def: "The intertrochanteric line (or spiral line of the femur) is a line located on the anterior side of the proximal end of the femur that stretches between the lesser trochanter and the greater trochanter forming the base of the neck of the femur, roughly following the direction of the shaft of the femur." [Wikipedia:Intertrochanteric_line] xref: FMA:74587 xref: Wikipedia:Intertrochanteric_line relationship: part_of UBERON:0004412 ! proximal epiphysis of femur [Term] id: UBERON:0013649 name: fused tarsal bones 1 and 2 namespace: uberon def: "A tarsal bone that is formed from the fusion of the 1st and 2nd tarsal bones." [UBERON:skansa] synonym: "fused tarsals 1 and 2" EXACT [] synonym: "os cuneiforme mediointermedium" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "os tarsale I et II" EXACT OMO:0003011 [NominaAnatomicaVeterinaria:2005] synonym: "tarsals 1+2" RELATED [] is_a: UBERON:0010721 ! distal tarsal bone property_value: RO:0002175 NCBITaxon:9788 [Term] id: UBERON:0013707 name: iliac spine namespace: uberon def: "A bone spine that is part of a ilium." [OBOL:automatic] xref: FMA:82509 xref: SCTID:272712007 xref: Wikipedia:Iliac_spine relationship: part_of UBERON:0001273 ! ilium [Term] id: UBERON:0013708 name: anterior superior iliac spine namespace: uberon def: "The anterior superior iliac spine (ASIS) is an important landmark of surface anatomy. It refers to the anterior extremity of the iliac crest of the pelvis, which provides attachment for the inguinal ligament, the sartorius muscle, and the tensor fasciae latae. ASIS provides a clue in identifying some other clinical landmarks, including: McBurney's point Gardner's line Roser-NC)laton line A - Anterior (front, like the face) S - Superior (towards the head, opposite to feet) I - Iliac S - Spine." [Wikipedia:Anterior_superior_iliac_spine] synonym: "anterior superior iliac spine" RELATED [Wikipedia:Anterior_superior_iliac_spine] synonym: "anterior superior iliac spine (volume)" EXACT [FMA:49465] synonym: "anterior superior spine" RELATED [Wikipedia:Anterior_superior_iliac_spine] xref: FMA:49465 xref: SCTID:182031001 xref: Wikipedia:Anterior_superior_iliac_spine is_a: UBERON:0013712 ! anterior iliac spine [Term] id: UBERON:0013709 name: anterior inferior iliac spine namespace: uberon def: "The anterior inferior iliac spine (AIIS) is a bony eminence on the anterior border of the hip bone, or, more precisely, the wing of the ilium (i.e. the upper lateral parts of the pelvis)." [Wikipedia:Anterior_inferior_iliac_spine] synonym: "anterior inferior iliac spine (volume)" EXACT [FMA:63614] synonym: "anterior inferior spine" RELATED [Wikipedia:Anterior_inferior_iliac_spine] xref: FMA:63614 xref: SCTID:182030000 xref: Wikipedia:Anterior_inferior_iliac_spine is_a: UBERON:0013712 ! anterior iliac spine [Term] id: UBERON:0013710 name: posterior superior iliac spine namespace: uberon def: "The posterior border of the ala, shorter than the anterior, also presents two projections separated by a notch, the posterior superior iliac spine and the posterior inferior iliac spine. The posterior superior iliac spine serves for the attachment of the oblique portion of the posterior sacroiliac ligaments and the Multifidus." [Wikipedia:Posterior_superior_iliac_spine] synonym: "posterior superior iliac spine (volume)" EXACT [FMA:49468] synonym: "posterior superior spine of the ilium" RELATED [Wikipedia:Posterior_superior_iliac_spine] xref: FMA:49468 xref: SCTID:182032008 xref: Wikipedia:Posterior_superior_iliac_spine is_a: UBERON:0013713 ! posterior iliac spine [Term] id: UBERON:0013711 name: posterior inferior iliac spine namespace: uberon def: "The posterior border of the ala, shorter than the anterior, also presents two projections separated by a notch, the posterior superior iliac spine and the posterior inferior iliac spine. The posterior inferior iliac spine corresponds with the posterior extremity of the auricular surface." [Wikipedia:Posterior_inferior_iliac_spine] synonym: "posterior inferior iliac spine (volume)" EXACT [FMA:63615] synonym: "posterior inferior spine of the ilium" RELATED [] xref: FMA:63615 xref: SCTID:182033003 xref: Wikipedia:Posterior_inferior_iliac_spine is_a: UBERON:0013713 ! posterior iliac spine [Term] id: UBERON:0013712 name: anterior iliac spine namespace: uberon is_a: UBERON:0013707 ! iliac spine [Term] id: UBERON:0013713 name: posterior iliac spine namespace: uberon is_a: UBERON:0013707 ! iliac spine [Term] id: UBERON:0013748 name: ulnar metaphysis namespace: uberon def: "A metaphysis that is part of a ulna." [OBOL:automatic] subset: pheno_slim synonym: "metaphysis of ulna" EXACT [FMA:33767] xref: FMA:33767 is_a: UBERON:0001438 ! metaphysis relationship: part_of UBERON:0001010 {source="FMA"} ! diaphysis of ulna relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:0013749 name: metaphysis of humerus namespace: uberon def: "A metaphysis that is part of a metaphysis." [OBOL:automatic] subset: pheno_slim synonym: "diaphyseal end of humerus" EXACT [FMA:32830] synonym: "humeral metaphysis" EXACT [FMA:32830] xref: FMA:32830 is_a: UBERON:0001438 ! metaphysis relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0013750 name: metaphysis of tibia namespace: uberon def: "A metaphysis that is part of a tibia." [OBOL:automatic] subset: pheno_slim synonym: "tibial metaphysis" EXACT [FMA:33135] xref: EMAPA:37772 {source="MA:th"} xref: FMA:33135 xref: MA:0003106 is_a: UBERON:0001438 ! metaphysis relationship: part_of UBERON:0000979 ! tibia [Term] id: UBERON:0013751 name: metaphysis of radius namespace: uberon def: "A metaphysis that is part of a radius bone." [OBOL:automatic] subset: pheno_slim synonym: "radial metaphysis" EXACT [FMA:33789] xref: FMA:33789 is_a: UBERON:0001438 ! metaphysis relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:0013752 name: diaphysis of metacarpal bone namespace: uberon def: "A diaphysis that is part of a metacarpal bone." [OBOL:automatic] synonym: "body of metacarpal" EXACT [FMA:33804] synonym: "corpus ossis metacarpi" EXACT [FMA:TA] synonym: "metacarpal bone diaphysis" EXACT [FMA:33804] synonym: "shaft of metacarpal" EXACT [FMA:33804] synonym: "shaft of metacarpal bone" EXACT [FMA:33804] xref: FMA:33804 is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0002374 ! metacarpal bone [Term] id: UBERON:0013753 name: distal epiphysis of metacarpal bone namespace: uberon def: "A distal epiphysis that is part of a metacarpal bone." [OBOL:automatic] subset: pheno_slim synonym: "caput ossis metacarpi" EXACT [FMA:TA] synonym: "distal end of metacarpal bone" EXACT [FMA:33798] synonym: "head of metacarpal bone" EXACT [FMA:33798] synonym: "lower end of metacarpal bone" EXACT [FMA:33798] xref: FMA:33798 is_a: UBERON:0004379 ! distal epiphysis is_a: UBERON:0004390 ! epiphysis of metacarpal bone relationship: part_of UBERON:0002374 ! metacarpal bone [Term] id: UBERON:0013774 name: diaphysis of metatarsal bone namespace: uberon def: "A diaphysis that is part of a metatarsal bone." [OBOL:automatic] subset: pheno_slim synonym: "diaphysis of metatarsal" EXACT [] synonym: "metatarsal bone diaphysis" EXACT [FMA:33826] synonym: "metatarsal diaphysis" EXACT [] synonym: "shaft of metatarsal bone" EXACT [FMA:33826] xref: FMA:33826 is_a: UBERON:0004769 ! diaphysis relationship: part_of UBERON:0001448 ! metatarsal bone [Term] id: UBERON:0014395 name: proximal mesopodial bone namespace: uberon def: "A proximal mesopodial endochondral element that is composed primarily of a bone tissue." [OBOL:automatic] is_a: UBERON:0003656 ! mesopodium bone is_a: UBERON:0017750 ! proximal mesopodial endochondral element [Term] id: UBERON:0014409 name: metacromion namespace: uberon def: "A process projecting backward and downward from the acromion of the scapula of some mammals." [http://www.thefreedictionary.com/Metacromion] synonym: "metacromion of scapula" EXACT [] synonym: "metacromion process" EXACT [] synonym: "scapular metacromion" EXACT [] relationship: part_of UBERON:0006849 ! scapula [Term] id: UBERON:0014411 name: greater sciatic notch namespace: uberon def: "On the dorsal border of the wing of the ilium , at it's junction with the shaft is a cut away. This forms the Greater sciatic notch. The sciatic nerve runs over the notch in passage to the hindlimb." [MURDOCH:865] subset: pheno_slim synonym: "greater sacrosciatic notch" EXACT [] synonym: "incisura ischiadica major" EXACT OMO:0003011 [Wikipedia:Greater_sciatic_notch] xref: FMA:16902 xref: SCTID:292728005 xref: Wikipedia:Greater_sciatic_notch is_a: UBERON:0014430 ! sciatic notch property_value: UBPROP:0000001 "deep indentation in the posterior border of the hip bone at the point of union of the ilium and ischium[HP:0010456]." xsd:string {source="HP:0010456"} [Term] id: UBERON:0014430 name: sciatic notch namespace: uberon def: "Either of two notches on the dorsal border of the hip bone on each side that when closed off by ligaments form the corresponding sciatic foramina." [http://www.merriam-webster.com/medical/sciatic+notch] xref: SCTID:360956007 xref: Wikipedia:Sciatic_notch relationship: part_of UBERON:0001274 ! ischium [Term] id: UBERON:0014436 name: lesser sciatic notch namespace: uberon def: "Below the ischial spine is a smaller notch, the lesser sciatic notch; it is smooth, coated in the recent state with cartilage, the surface of which presents two or three ridges corresponding to the subdivisions of the tendon of the Obturator internus, which winds over it. It is converted into a foramen, the lesser sciatic foramen, by the sacrotuberous and sacrospinous ligaments, and transmits the tendon of the Obturator internus, the nerve which supplies that muscle, and the internal pudendal vessels and nerve." [Wikipedia:Lesser_sciatic_notch] synonym: "incisura ischiadica minor" EXACT OMO:0003011 [Wikipedia:Lesser_sciatic_notch] xref: FMA:16911 xref: SCTID:292830001 xref: Wikipedia:Lesser_sciatic_notch is_a: UBERON:0014430 ! sciatic notch [Term] id: UBERON:0014437 name: iliac crest namespace: uberon def: "Is part of the pelvis on the edge of the wing of the ilium. Round in shape, dorsal to the pubis and ischium. Acts as structrure that muscles can attach too." [MURDOCH:931] subset: pheno_slim xref: EMAPA:37602 {source="MA:th"} xref: FMA:16914 xref: MA:0003053 xref: NCIT:C103818 xref: SCTID:182034009 relationship: part_of UBERON:0001273 ! ilium [Term] id: UBERON:0014438 name: superior pubic ramus namespace: uberon def: "The superior pubic ramus is a part of the pubic bone which forms a portion of the obturator foramen. It extends from the body to the median plane where it articulates with its fellow of the opposite side. It is conveniently described in two portions, viz. , a medial flattened part and a narrow lateral prismoid portion." [Wikipedia:Superior_pubic_ramus] synonym: "superior rami of the pubes" RELATED [Wikipedia:Superior_pubic_ramus] synonym: "superior ramus of pubis" EXACT [FMA:16988] synonym: "superior ramus of the pubis" RELATED [Wikipedia:Superior_pubic_ramus] xref: FMA:16988 xref: SCTID:182037002 xref: Wikipedia:Superior_pubic_ramus is_a: UBERON:0014444 ! pubic ramus [Term] id: UBERON:0014439 name: inferior pubic ramus namespace: uberon def: "The inferior pubic ramus is thin and flattened. It passes lateralward and downward from the medial end of the superior ramus; it becomes narrower as it descends and joins with the inferior ramus of the ischium below the obturator foramen." [Wikipedia:Inferior_pubic_ramus] subset: pheno_slim synonym: "inferior rami of the pubes" RELATED [Wikipedia:Inferior_pubic_ramus] synonym: "inferior ramus of pubis" EXACT [FMA:16989] synonym: "inferior ramus of the pubis" RELATED [Wikipedia:Inferior_pubic_ramus] xref: FMA:16989 xref: SCTID:182038007 xref: Wikipedia:Inferior_pubic_ramus is_a: UBERON:0014444 ! pubic ramus [Term] id: UBERON:0014440 name: ischiopubic ramus namespace: uberon def: "The ischiopubic ramus is a compound structure consisting of the following two structures: from the pubis, the inferior pubic ramus from the ischium, the inferior ramus of the ischium It serves as part of the origin for the Obturator internus muscle. It also marks a vertex of the anal triangle and the urogenital triangle. The fascia of Colles is attached to its margin." [Wikipedia:Ischiopubic_ramus] synonym: "conjoint ramus" EXACT [FMA:43533] synonym: "ischiopubic rami" RELATED [Wikipedia:Ischiopubic_ramus] synonym: "rami of the pubis and ischium" RELATED [Wikipedia:Ischiopubic_ramus] xref: FMA:43533 xref: Wikipedia:Ischiopubic_ramus relationship: part_of UBERON:0001272 {source="FMA"} ! innominate bone [Term] id: UBERON:0014441 name: ischial ramus namespace: uberon synonym: "ramus of ischium" EXACT [FMA:17007] synonym: "ramus ossis ischii" EXACT [FMA:17007] synonym: "ramusi ossis ischii" EXACT [FMA:TA] xref: FMA:17007 xref: SCTID:182043000 relationship: part_of UBERON:0001274 ! ischium [Term] id: UBERON:0014442 name: superior ischial ramus namespace: uberon def: "The superior ramus of the ischium (descending ramus) projects downward and backward from the body and presents for examination three surfaces: external, internal, and posterior. The external surface is quadrilateral in shape. It is bounded above by a groove which lodges the tendon of the Obturator externus; below, it is continuous with the inferior ramus; in front it is limited by the posterior margin of the obturator foramen; behind, a prominent margin separates it from the posterior surface. In front of this margin the surface gives origin to the Quadratus femoris, and anterior to this to some of the fibers of origin of the Obturator externus; the lower part of the surface gives origin to part of the Adductor magnus. The internal surface forms part of the bony wall of the lesser pelvis. In front it is limited by the posterior margin of the obturator foramen. Below, it is bounded by a sharp ridge which gives attachment to a falciform prolongation of the sacrotuberous ligament, and, more anteriorly, gives origin to the Transversus perinC&i and Ischiocavernosus. Posteriorly the ramus forms a large swelling, the tuberosity of the ischium." [Wikipedia:Superior_ramus_of_the_ischium] synonym: "superior ramus of ischium" RELATED [] xref: FMA:304318 xref: SCTID:292625002 xref: Wikipedia:Superior_ramus_of_the_ischium is_a: UBERON:0014441 ! ischial ramus [Term] id: UBERON:0014443 name: inferior ischial ramus namespace: uberon def: "The Inferior Ramus of the ischium (ascending ramus) is the thin, flattened part of the ischium, which ascends from the superior ramus, and joins the inferior ramus of the pubisbthe junction being indicated in the adult by a raised line. The outer surface is uneven for the origin of the obturator externus and some of the fibers of the adductor magnus; its inner surface forms part of the anterior wall of the pelvis. Its medial border is thick, rough, slightly everted, forms part of the outlet of the pelvis, and presents two ridges and an intervening space. The ridges are continuous with similar ones on the inferior ramus of the pubis: to the outer is attached the deep layer of the superficial perineal fascia (fascia of Colles), and to the inner the inferior fascia of the urogenital diaphragm. If these two ridges be traced downward, they will be found to join with each other just behind the point of origin of the transversus perinC&i; here the two layers of fascia are continuous behind the posterior border of the muscle. To the intervening space, just in front of the point of junction of the ridges, the transversus perinC&i is attached, and in front of this a portion of the crus penis vel clitoridis and the ischiocavernosus. Its lateral border is thin and sharp, and forms part of the medial margin of the obturator foramen." [Wikipedia:Inferior_ramus_of_the_ischium] synonym: "inferior rami of the pubis" RELATED [Wikipedia:Inferior_ramus_of_the_ischium] synonym: "inferior ramus of ischium" RELATED [] xref: SCTID:361324004 xref: Wikipedia:Inferior_ramus_of_the_ischium is_a: UBERON:0014441 ! ischial ramus [Term] id: UBERON:0014444 name: pubic ramus namespace: uberon subset: pheno_slim synonym: "ramus of pubis" EXACT [] xref: SCTID:182026003 relationship: part_of UBERON:0001275 ! pubis [Term] id: UBERON:0014445 name: acetabular fossa namespace: uberon def: "The acetabular fossa is the roughened depression in the centre of the acetabulum, surrounded by the lunate acetabular surface and the acetabular notch. The acetabular fossa provides an insertion point for the teres ligaments that secure the femoral head." [MURDOCH:100] comment: It is occupied by the ligament of head of femur[WP] subset: pheno_slim synonym: "fossa acetabularis" EXACT OMO:0003011 [Wikipedia:Acetabular_fossa] synonym: "fossa acetabularis (acetabuli)" EXACT [FMA:17269] synonym: "fossa acetabuli" EXACT OMO:0003011 [Wikipedia:Acetabular_fossa] xref: FMA:17269 xref: SCTID:289666003 xref: Wikipedia:Acetabular_fossa relationship: part_of UBERON:0001272 ! innominate bone [Term] id: UBERON:0014446 name: acetabular notch namespace: uberon def: "The acetabulum presents below a deep notch, the acetabular notch, which is continuous with a circular non-articular depression, the acetabular fossa, at the bottom of the cavity: this depression is perforated by numerous apertures, and lodges a mass of fat. The notch is converted into a foramen by the transverse ligament; through the foramen nutrient vessels and nerves enter the joint; the margins of the notch serve for the attachment of the ligament of the head of the femur." [Wikipedia:Acetabular_notch] xref: FMA:16944 xref: SCTID:289767000 xref: Wikipedia:Acetabular_notch relationship: part_of UBERON:0001272 ! innominate bone [Term] id: UBERON:0014483 name: distal phalanx of digit 1 namespace: uberon def: "A distal phalanx that is part of a digit 1 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 1 distal phalanx" EXACT [PHENOSCAPE:wd] synonym: "digit I P3" RELATED [] synonym: "distal phalanx of digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of first digit" EXACT [] synonym: "first distal phalanx" RELATED [] is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5106048 ! digit 1 digitopodial skeleton [Term] id: UBERON:0014484 name: distal phalanx of digit 2 namespace: uberon def: "A distal phalanx that is part of a digit 2 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "2nd digit distal phalanx" EXACT [] synonym: "digit 2 distal phalanx" EXACT [PHENOSCAPE:wd] synonym: "digit II P3" RELATED [] synonym: "distal phalanx of 2nd digit" EXACT [] synonym: "distal phalanx of digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of index digit" EXACT [] synonym: "distal phalanx of second digit" EXACT [] synonym: "second digit distal phalanx" EXACT [] synonym: "second distal phalanx" EXACT [] is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5106049 ! digit 2 digitopodial skeleton [Term] id: UBERON:0014485 name: distal phalanx of digit 3 namespace: uberon def: "A distal phalanx that is part of a digit 3. In odd-toes ungulates (Perissodactyla e.g. horses) this is called the coffin bone. In even-toed ungulates (Artiodactyla e.g cattle) this is associated with the medial claw." [http://orcid.org/0000-0002-6601-2165, Wikipedia:Coffin_bone, Wikipedia:Equine_forelimb_anatomy#Distal_phalanx] synonym: "3rd digit distal phalanx" EXACT [] synonym: "coffin bone" NARROW [NCBITaxon:9787] synonym: "digit 3 distal phalanx" EXACT [PHENOSCAPE:wd] synonym: "digit III P3" RELATED [] synonym: "distal phalanx of 3rd digit" EXACT [] synonym: "distal phalanx of digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of middle digit" EXACT [] synonym: "distal phalanx of third digit" EXACT [] synonym: "equine 3rd phalanx of digit 3" EXACT [https://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "equine distal phalanx" EXACT [https://orcid.org/0000-0002-6601-2165, NCBITaxon:9788] synonym: "medial claw of artiodactyl" NARROW [NCBITaxon:91561] synonym: "medial claw of ruminant hoof" NARROW [NCBITaxon:91561] synonym: "medial ungual phalanx of artiodactyl" NARROW [NCBITaxon:91561] synonym: "pedal bone" NARROW [NCBITaxon:9787] synonym: "third digit distal phalanx" EXACT [] synonym: "third distal phalanx" EXACT [] xref: SCTID:370666003 xref: SCTID:370671005 xref: SCTID:410030004 xref: Wikipedia:Coffin_bone is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5106050 ! digit 3 digitopodial skeleton property_value: UBPROP:0000008 "the bottommost bone in the equine leg and is encased by the hoof capsule. The distal phalanx articulates with both the middle phalanx and the distal sesamoid, forming the distal interphalangeal joint[Wikipedia:Coffin_bone]" xsd:string {source="Wikipedia:Coffin_bone", taxon="NCBITaxon:9788"} [Term] id: UBERON:0014486 name: distal phalanx of digit 4 namespace: uberon def: "A distal phalanx that is part of a digit 4 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "4th digit distal phalanx" EXACT [] synonym: "digit 4 distal phalanx" EXACT [PHENOSCAPE:wd] synonym: "digit IV P3" RELATED [] synonym: "distal phalanx of 4th digit" EXACT [] synonym: "distal phalanx of digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of fourth digit" EXACT [] synonym: "distal phalanx of ring digit" EXACT [] synonym: "fourth digit distal phalanx" EXACT [] synonym: "fourth distal phalanx" EXACT [] synonym: "lateral claw of artiodactyl" NARROW [NCBITaxon:91561] synonym: "lateral claw of ruminant hoof" NARROW [NCBITaxon:91561] synonym: "lateral ungual phalanx of artiodactyl" NARROW [NCBITaxon:91561] xref: SCTID:370667007 xref: SCTID:370670006 is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5106051 ! digit 4 digitopodial skeleton [Term] id: UBERON:0014487 name: distal phalanx of digit 5 namespace: uberon def: "A distal phalanx that is part of a digit 5 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "5th digit distal phalanx" EXACT [] synonym: "digit 5 distal phalanx" EXACT [PHENOSCAPE:wd] synonym: "digit V P3" RELATED [] synonym: "distal phalanx of 5th digit" EXACT [] synonym: "distal phalanx of digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal phalanx of fifth digit" EXACT [] synonym: "distal phalanx of little digit" EXACT [] synonym: "fifth digit distal phalanx" EXACT [] synonym: "fifth distal phalanx" EXACT [] is_a: UBERON:0004300 ! distal phalanx relationship: part_of UBERON:5106052 ! digit 5 digitopodial skeleton [Term] id: UBERON:0014488 name: middle phalanx of digit 2 namespace: uberon def: "A middle phalanx that is part of a digit 2 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "2nd digit intermediate phalanx" EXACT [] synonym: "2nd digit middle phalanx" EXACT [] synonym: "2nd digit of intermediate phalanx" EXACT [] synonym: "2nd digit of middle phalanx" EXACT [] synonym: "digit 2 intermediate phalanx" EXACT [] synonym: "digit 2 middle phalanx" EXACT [] synonym: "digit II P2" RELATED [] synonym: "intermediate phalanx of 2nd digit" EXACT [] synonym: "intermediate phalanx of digit 2" EXACT [] synonym: "intermediate phalanx of second digit" EXACT [] synonym: "middle phalanx of 2nd digit" EXACT [] synonym: "middle phalanx of digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of index digit" EXACT [] synonym: "middle phalanx of second digit" EXACT [] synonym: "second digit intermediate phalanx" EXACT [] synonym: "second digit middle phalanx" EXACT [] synonym: "second middle phalanx" EXACT [] is_a: UBERON:0004301 ! middle phalanx relationship: part_of UBERON:5106049 ! digit 2 digitopodial skeleton [Term] id: UBERON:0014489 name: middle phalanx of digit 3 namespace: uberon def: "A middle phalanx that is part of a digit 3 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "3rd digit intermediate phalanx" EXACT [] synonym: "3rd digit middle phalanx" EXACT [] synonym: "3rd digit of intermediate phalanx" EXACT [] synonym: "3rd digit of middle phalanx" EXACT [] synonym: "digit 3 intermediate phalanx" EXACT [] synonym: "digit 3 middle phalanx" EXACT [] synonym: "digit III P2" RELATED [] synonym: "intermediate phalanx of 3rd digit" EXACT [] synonym: "intermediate phalanx of digit 3" EXACT [] synonym: "intermediate phalanx of third digit" EXACT [] synonym: "middle phalanx of 3rd digit" EXACT [] synonym: "middle phalanx of digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of middle digit" EXACT [] synonym: "middle phalanx of third digit" EXACT [] synonym: "third digit intermediate phalanx" EXACT [] synonym: "third digit middle phalanx" EXACT [] synonym: "third middle phalanx" EXACT [] xref: SCTID:370676000 is_a: UBERON:0004301 ! middle phalanx relationship: part_of UBERON:5106050 ! digit 3 digitopodial skeleton [Term] id: UBERON:0014490 name: middle phalanx of digit 4 namespace: uberon def: "A middle phalanx that is part of a digit 4 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "4th digit intermediate phalanx" EXACT [] synonym: "4th digit middle phalanx" EXACT [] synonym: "4th digit of intermediate phalanx" EXACT [] synonym: "4th digit of middle phalanx" EXACT [] synonym: "digit 4 intermediate phalanx" EXACT [] synonym: "digit 4 middle phalanx" EXACT [] synonym: "digit IV P2" RELATED [] synonym: "fourth digit intermediate phalanx" EXACT [] synonym: "fourth digit middle phalanx" EXACT [] synonym: "fourth middle phalanx" EXACT [] synonym: "intermediate phalanx of 4th digit" EXACT [] synonym: "intermediate phalanx of digit 4" EXACT [] synonym: "intermediate phalanx of fourth digit" EXACT [] synonym: "middle phalanx of 4th digit" EXACT [] synonym: "middle phalanx of digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of fourth digit" EXACT [] synonym: "middle phalanx of ring digit" EXACT [] xref: SCTID:370675001 is_a: UBERON:0004301 ! middle phalanx relationship: part_of UBERON:5106051 ! digit 4 digitopodial skeleton [Term] id: UBERON:0014491 name: middle phalanx of digit 5 namespace: uberon def: "A middle phalanx that is part of a digit 5 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "5th digit intermediate phalanx" EXACT [] synonym: "5th digit middle phalanx" EXACT [] synonym: "5th digit of intermediate phalanx" EXACT [] synonym: "5th digit of middle phalanx" EXACT [] synonym: "digit 5 intermediate phalanx" EXACT [] synonym: "digit 5 middle phalanx" EXACT [] synonym: "digit V P2" RELATED [] synonym: "fifth digit intermediate phalanx" EXACT [] synonym: "fifth digit middle phalanx" EXACT [] synonym: "fifth middle phalanx" EXACT [] synonym: "intermediate phalanx of 5th digit" EXACT [] synonym: "intermediate phalanx of digit 5" EXACT [] synonym: "intermediate phalanx of fifth digit" EXACT [] synonym: "middle phalanx of 5th digit" EXACT [] synonym: "middle phalanx of digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "middle phalanx of fifth digit" EXACT [] synonym: "middle phalanx of little digit" EXACT [] is_a: UBERON:0004301 ! middle phalanx relationship: part_of UBERON:5106052 ! digit 5 digitopodial skeleton [Term] id: UBERON:0014501 name: proximal phalanx of digit 1 namespace: uberon def: "A proximal phalanx that is part of a autopod digit 1 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "digit I P1" EXACT [] synonym: "digit I-1" EXACT [PHENOSCAPE:wd] synonym: "first proximal phalanx of autopod" EXACT [] synonym: "proximal phalanx of digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of first digit of autopod" EXACT [] is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5106048 ! digit 1 digitopodial skeleton [Term] id: UBERON:0014502 name: proximal phalanx of digit 2 namespace: uberon def: "A proximal phalanx that is part of a autopod digit 2 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "2nd digit of autopod proximal phalanx" EXACT [] synonym: "2nd digit proximal phalanx" EXACT [] synonym: "autopod digit 2 proximal phalanx" EXACT [] synonym: "digit II-1" EXACT [PHENOSCAPE:wd] synonym: "digit IU P1" EXACT [] synonym: "proximal phalanx of 2nd digit" EXACT [] synonym: "proximal phalanx of 2nd digit of autopod" EXACT [] synonym: "proximal phalanx of digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of index digit" EXACT [] synonym: "proximal phalanx of second digit" EXACT [] synonym: "proximal phalanx of second digit of autopod" EXACT [] synonym: "second digit proximal phalanx" EXACT [] synonym: "second proximal phalanx of autopod" EXACT [] is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5106049 ! digit 2 digitopodial skeleton [Term] id: UBERON:0014503 name: proximal phalanx of digit 3 namespace: uberon def: "A proximal phalanx that is part of a autopod digit 3 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "3rd digit of autopod proximal phalanx" EXACT [] synonym: "3rd digit proximal phalanx" EXACT [] synonym: "autopod digit 3 proximal phalanx" EXACT [] synonym: "digit III P1" EXACT [] synonym: "digit III-1" EXACT [PHENOSCAPE:wd] synonym: "proximal phalanx of 3rd digit" EXACT [] synonym: "proximal phalanx of 3rd digit of autopod" EXACT [] synonym: "proximal phalanx of digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of middle digit" EXACT [] synonym: "proximal phalanx of third digit" EXACT [] synonym: "proximal phalanx of third digit of autopod" EXACT [] synonym: "third digit proximal phalanx" EXACT [] synonym: "third proximal phalanx of autopod" EXACT [] xref: SCTID:370732000 is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5106050 ! digit 3 digitopodial skeleton [Term] id: UBERON:0014504 name: proximal phalanx of digit 4 namespace: uberon def: "A proximal phalanx that is part of a autopod digit 4 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "4th digit of autopod proximal phalanx" EXACT [] synonym: "4th digit proximal phalanx" EXACT [] synonym: "autopod digit 4 proximal phalanx" EXACT [] synonym: "digit IV P1" EXACT [] synonym: "digit IV-1" EXACT [PHENOSCAPE:wd] synonym: "fourth digit proximal phalanx" EXACT [] synonym: "fourth proximal phalanx of autopod" EXACT [] synonym: "proximal phalanx of 4th digit" EXACT [] synonym: "proximal phalanx of 4th digit of autopod" EXACT [] synonym: "proximal phalanx of digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of fourth digit" EXACT [] synonym: "proximal phalanx of fourth digit of autopod" EXACT [] synonym: "proximal phalanx of ring digit" EXACT [] is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5106051 ! digit 4 digitopodial skeleton [Term] id: UBERON:0014505 name: proximal phalanx of digit 5 namespace: uberon def: "A proximal phalanx that is part of a autopod digit 5 [Automatically generated definition]." [http://orcid.org/0000-0002-6601-2165] synonym: "5th digit of autopod proximal phalanx" EXACT [] synonym: "5th digit proximal phalanx" EXACT [] synonym: "autopod digit 5 proximal phalanx" EXACT [] synonym: "digit V P1" EXACT [] synonym: "digit V-1" EXACT [PHENOSCAPE:wd] synonym: "fifth digit proximal phalanx" EXACT [] synonym: "fifth proximal phalanx of autopod" EXACT [] synonym: "proximal phalanx of 5th digit" EXACT [] synonym: "proximal phalanx of 5th digit of autopod" EXACT [] synonym: "proximal phalanx of digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "proximal phalanx of fifth digit" EXACT [] synonym: "proximal phalanx of fifth digit of autopod" EXACT [] synonym: "proximal phalanx of little digit" EXACT [] is_a: UBERON:0004302 ! proximal phalanx relationship: part_of UBERON:5106052 ! digit 5 digitopodial skeleton [Term] id: UBERON:0014762 name: fused metapodial bones 2-4 namespace: uberon def: "An element formed from the fusion of metapodium bones 2, 3 and 4 (i.e. either metatarsals 2-4 or metacarpals 3-4)." [http://orcid.org/0000-0002-6601-2165] synonym: "fused central metapodials" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "fused metapodials 2-4" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "metapodial 2+3+4" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:0013586 ! fused metapodial bones 3 and 4 property_value: RO:0002175 NCBITaxon:51337 [Term] id: UBERON:0014763 name: fused metatarsal bones 2-4 namespace: uberon def: "An element formed from the fusion of metapodium bones 2, 3 and 4 in the pedal autopod." [http://orcid.org/0000-0002-6601-2165] synonym: "cannon bone" RELATED [NCBITaxon:51337] synonym: "fused central metatarsals" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "fused metatarsals 2-4" EXACT [http://orcid.org/0000-0002-6601-2165] synonym: "metatarsal 2+3+4" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:0013588 ! fused metatarsal bones 3 and 4 is_a: UBERON:0014762 ! fused metapodial bones 2-4 property_value: RO:0002175 NCBITaxon:51337 property_value: UBPROP:0000008 "The cannon bone of the 3-toed jerboa (jaculus jaculus) is the postnatal fusion of the 3 central metatarsals, which are distinct ossified elements prenatally" xsd:string {source="PMID:22135653", taxon="NCBITaxon:51337"} [Term] id: UBERON:0014871 name: distal epiphysis of distal phalanx of pedal digit 1 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of pedal digit 1." [OBOL:automatic] synonym: "distal end of distal phalanx of big toe" EXACT [FMA:33036] synonym: "distal epiphysis of distal phalanx of big toe" EXACT [FMA:33036] synonym: "distal epiphysis of distal phalanx of pedal digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "head of distal phalanx of big toe" EXACT [FMA:33036] synonym: "head of distal phalanx of first digit of foot" EXACT [FMA:33036] synonym: "head of distal phalanx of great toe" EXACT [FMA:33036] synonym: "ungual tuberosity of distal phalanx of big toe" RELATED [FMA:33036] xref: FMA:33036 is_a: UBERON:0014876 ! distal epiphysis of distal phalanx of pedal digit relationship: part_of UBERON:0004315 ! distal phalanx of pedal digit 1 [Term] id: UBERON:0014872 name: distal epiphysis of distal phalanx of pedal digit 2 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of pedal digit 2." [OBOL:automatic] synonym: "distal end of distal phalanx of second toe" EXACT [FMA:33045] synonym: "distal epiphysis of distal phalanx of pedal digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal epiphysis of distal phalanx of second toe" EXACT [FMA:33045] synonym: "head of distal phalanx of second toe" EXACT [FMA:33045] synonym: "ungual tuberosity of distal phalanx of second toe" RELATED [FMA:33045] xref: FMA:33045 is_a: UBERON:0014876 ! distal epiphysis of distal phalanx of pedal digit relationship: part_of UBERON:0004316 ! distal phalanx of pedal digit 2 [Term] id: UBERON:0014873 name: distal epiphysis of distal phalanx of pedal digit 3 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of pedal digit 3." [OBOL:automatic] synonym: "distal end of distal phalanx of third toe" EXACT [FMA:33054] synonym: "distal epiphysis of distal phalanx of pedal digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal epiphysis of distal phalanx of third toe" EXACT [FMA:33054] synonym: "head of distal phalanx of third digit of foot" EXACT [FMA:33054] synonym: "head of distal phalanx of third toe" EXACT [FMA:33054] synonym: "ungual tuberosity of distal phalanx of third toe" RELATED [FMA:33054] xref: FMA:33054 is_a: UBERON:0014876 ! distal epiphysis of distal phalanx of pedal digit relationship: part_of UBERON:0004317 ! distal phalanx of pedal digit 3 [Term] id: UBERON:0014874 name: distal epiphysis of distal phalanx of pedal digit 4 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of pedal digit 4." [OBOL:automatic] synonym: "distal end of distal phalanx of fourth toe" EXACT [FMA:33091] synonym: "distal epiphysis of distal phalanx of fourth toe" EXACT [FMA:33091] synonym: "distal epiphysis of distal phalanx of pedal digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "head of distal phalanx of fourth digit of foot" EXACT [FMA:33091] synonym: "head of distal phalanx of fourth toe" EXACT [FMA:33091] synonym: "ungal tuberosity of distal phalanx of fourth toe" RELATED [FMA:33091] xref: FMA:33091 is_a: UBERON:0014876 ! distal epiphysis of distal phalanx of pedal digit relationship: part_of UBERON:0004318 ! distal phalanx of pedal digit 4 [Term] id: UBERON:0014875 name: distal epiphysis of distal phalanx of pedal digit 5 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of pedal digit 5." [OBOL:automatic] synonym: "distal end of distal phalanx of little toe" EXACT [FMA:33106] synonym: "distal epiphysis of distal phalanx of little toe" EXACT [FMA:33106] synonym: "distal epiphysis of distal phalanx of pedal digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "head of distal phalanx of fifth digit of foot" EXACT [FMA:33106] synonym: "head of distal phalanx of fifth toe" EXACT [FMA:33106] synonym: "head of distal phalanx of little toe" EXACT [FMA:33106] synonym: "ungual tuberosity of distal phalanx of fifth toe" RELATED [FMA:33106] xref: FMA:33106 is_a: UBERON:0014876 ! distal epiphysis of distal phalanx of pedal digit relationship: part_of UBERON:0004319 ! distal phalanx of pedal digit 5 [Term] id: UBERON:0014876 name: distal epiphysis of distal phalanx of pedal digit namespace: uberon synonym: "distal end of distal phalanx of toe" EXACT [] synonym: "head of distal phalanx of digit of foot" EXACT [] synonym: "head of distal phalanx of digit of pes" EXACT [] synonym: "head of distal phalanx of toe" EXACT [] is_a: UBERON:0011976 ! epiphysis of distal phalanx of pes is_a: UBERON:0013122 ! distal epiphysis of phalanx of pes is_a: UBERON:0014887 ! distal epiphysis of distal phalanx of digit relationship: part_of UBERON:0003867 ! distal phalanx of pes [Term] id: UBERON:0014881 name: distal epiphysis of distal phalanx of manual digit 1 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of manual digit 1." [OBOL:automatic] synonym: "distal end of phalanx of right thumb" EXACT [FMA:37609] synonym: "distal epiphysis of distal phalanx of manual digit I" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal epiphysis of distal phalanx of thumb" EXACT [FMA:37609] synonym: "head of distal phalanx of first digit of hand" EXACT [FMA:37609] synonym: "head of distal phalanx of thumb" EXACT [FMA:37609] synonym: "ungual tuberosity of distal phalanx of thumb" RELATED [FMA:37609] xref: FMA:37609 xref: SCTID:182011000 is_a: UBERON:0014886 ! distal epiphysis of distal phalanx of manual digit relationship: part_of UBERON:0004337 ! distal phalanx of manual digit 1 [Term] id: UBERON:0014882 name: distal epiphysis of distal phalanx of manual digit 2 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of manual digit 2." [OBOL:automatic] synonym: "distal end of distal phalanx of index finger" EXACT [FMA:37621] synonym: "distal end of distal phalanx of second finger" EXACT [FMA:37621] synonym: "distal epiphysis of distal phalanx of index finger" EXACT [FMA:37621] synonym: "distal epiphysis of distal phalanx of manual digit II" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "head of distal phalanx of index finger" EXACT [FMA:37621] synonym: "head of distal phalanx of second finger" EXACT [FMA:37621] synonym: "ungual tuberosity of distal phalanx of index finger" RELATED [FMA:37621] xref: FMA:37621 xref: SCTID:263457005 is_a: UBERON:0014886 ! distal epiphysis of distal phalanx of manual digit relationship: part_of UBERON:0004311 ! distal phalanx of manual digit 2 [Term] id: UBERON:0014883 name: distal epiphysis of distal phalanx of manual digit 3 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of manual digit 3." [OBOL:automatic] synonym: "distal end of distal phalanx of middle finger" EXACT [FMA:37633] synonym: "distal end of distal phalanx of third finger" EXACT [FMA:37633] synonym: "distal epiphysis of distal phalanx of manual digit III" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal epiphysis of distal phalanx of middle finger" EXACT [FMA:37633] synonym: "head of distal phalanx of middle finger" EXACT [FMA:37633] synonym: "head of distal phalanx of third digit of hand" EXACT [FMA:37633] synonym: "head of distal phalanx of third finger" EXACT [FMA:37633] synonym: "ungual tuberosity of distal phalanx of middle finger" RELATED [FMA:37633] xref: FMA:37633 xref: SCTID:263458000 is_a: UBERON:0014886 ! distal epiphysis of distal phalanx of manual digit relationship: part_of UBERON:0004312 ! distal phalanx of manual digit 3 [Term] id: UBERON:0014884 name: distal epiphysis of distal phalanx of manual digit 4 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of manual digit 4." [OBOL:automatic] synonym: "distal end of distal phalanx of fourth finger" EXACT [FMA:37645] synonym: "distal end of distal phalanx of ring finger" EXACT [FMA:37645] synonym: "distal epiphysis of distal phalanx of manual digit IV" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "distal epiphysis of distal phalanx of ring finger" EXACT [FMA:37645] synonym: "head of distal phalanx of fourth digit of hand" EXACT [FMA:37645] synonym: "head of distal phalanx of fourth finger" EXACT [FMA:37645] synonym: "head of distal phalanx of ring finger" EXACT [FMA:37645] synonym: "ungual tuberosity of distal phalanx of ring finger" RELATED [FMA:37645] xref: FMA:37645 xref: SCTID:263459008 is_a: UBERON:0014886 ! distal epiphysis of distal phalanx of manual digit relationship: part_of UBERON:0004313 ! distal phalanx of manual digit 4 [Term] id: UBERON:0014885 name: distal epiphysis of distal phalanx of manual digit 5 namespace: uberon def: "A distal epiphysis that is part of a distal phalanx of manual digit 5." [OBOL:automatic] synonym: "distal end of distal phalanx of fifth finger" EXACT [FMA:37657] synonym: "distal end of distal phalanx of little finger" EXACT [FMA:37657] synonym: "distal epiphysis of distal phalanx of little finger" EXACT [FMA:37657] synonym: "distal epiphysis of distal phalanx of manual digit V" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] synonym: "head of distal phalanx of fifth digit of hand" EXACT [FMA:37657] synonym: "head of distal phalanx of fifth finger" EXACT [FMA:37657] synonym: "head of distal phalanx of little finger" EXACT [FMA:37657] synonym: "ungual tuberosity of distal phalanx of little finger" RELATED [FMA:37657] xref: FMA:37657 xref: SCTID:263460003 is_a: UBERON:0014886 ! distal epiphysis of distal phalanx of manual digit relationship: part_of UBERON:0004314 ! distal phalanx of manual digit 5 [Term] id: UBERON:0014886 name: distal epiphysis of distal phalanx of manual digit namespace: uberon synonym: "distal end of distal phalanx of finger" EXACT [] synonym: "head of distal phalanx of digit of hand" EXACT [] synonym: "head of distal phalanx of digit of manus" EXACT [] synonym: "head of distal phalanx of finger" EXACT [] xref: SCTID:182006002 is_a: UBERON:0004409 ! distal epiphysis of phalanx of manus is_a: UBERON:0011979 ! epiphysis of distal phalanx of manus is_a: UBERON:0014887 ! distal epiphysis of distal phalanx of digit relationship: part_of UBERON:0003865 ! distal phalanx of manus [Term] id: UBERON:0014887 name: distal epiphysis of distal phalanx of digit namespace: uberon def: "A distal epiphysis that is part of a distal phalanx." [OBOL:automatic] synonym: "distal end of distal phalanx of digit" EXACT [] synonym: "head of distal phalanx" EXACT [] synonym: "head of distal phalanx of digit" EXACT [] synonym: "head of distal phalanx of digit of autopod" EXACT [] is_a: UBERON:0004448 ! distal epiphysis of phalanx relationship: part_of UBERON:0004300 ! distal phalanx [Term] id: UBERON:0014898 name: lamina terminalis of ischium namespace: uberon def: "In those cases in which the interilial region is broadly expanded and the pubis is extremely reduced, the anterior margin of the ischium forms an expanded area." [AAO:0000881, AAO:LAP] xref: AAO:0000881 relationship: part_of UBERON:0001274 {source="AAO"} ! ischium [Term] id: UBERON:0015001 name: radius endochondral element namespace: uberon def: "The major preaxial endrochondral skeletal element in the anterior zeugopod." [https://github.com/obophenotype/uberon/issues/70, UBERON:mah] synonym: "radius element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "radius skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly [Term] id: UBERON:0015002 name: radius-ulna endochondral element namespace: uberon def: "A radius-ulna bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "radius-ulna element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "radius-ulna skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton [Term] id: UBERON:0015003 name: ulna endochondral element namespace: uberon def: "Major postaxial endrochondral skeletal element in the anterior zeugopod." [https://github.com/obophenotype/uberon/issues/70, UBERON:mah] comment: The corresponding element in the posterior fin/limb is the fibula. synonym: "ulna element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "ulna skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly [Term] id: UBERON:0015004 name: tibia endochondral element namespace: uberon def: "The major preaxial endochondral element in the posterior zeugopod[Phenoscape]." [https://github.com/obophenotype/uberon/issues/71, PHENOSCAPE:mah] synonym: "tibia element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tibia skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly [Term] id: UBERON:0015011 name: tibiotarsus endochondral element namespace: uberon def: "A tibiotarsus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tibiotarsus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tibiotarsus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0015012 name: tarsometatarsus endochondral element namespace: uberon def: "A tarsometatarsus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tarsometatarsus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tarsometatarsus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0001445 ! skeleton of pes [Term] id: UBERON:0015013 name: fibula endochondral element namespace: uberon def: "The major postaxial endochondral element in the posterior zeugopod[Phenoscape]." [https://github.com/obophenotype/uberon/issues/73, PHENOSCAPE:mah] synonym: "fibula element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "fibula skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/mellybelly [Term] id: UBERON:0015014 name: calcaneum endochondral element namespace: uberon def: "A calcaneum bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "calcaneum element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "calcaneum skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015050 ! tarsus endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015021 name: forelimb endochondral element namespace: uberon def: "A forelimb bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "forelimb skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015061 ! limb endochondral element relationship: part_of UBERON:0001440 ! forelimb skeleton [Term] id: UBERON:0015022 name: hindlimb endochondral element namespace: uberon def: "A hindlimb bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "hindlimb bone skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015061 ! limb endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0015023 name: phalanx endochondral element namespace: uberon def: "A phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0012150 ! skeleton of digitopodium [Term] id: UBERON:0015024 name: manual digit phalanx endochondral element namespace: uberon def: "A manual digit phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element is_a: UBERON:0015023 ! phalanx endochondral element relationship: part_of UBERON:0010688 ! skeleton of manual acropodium relationship: part_of UBERON:5102389 ! manual digit digitopodial skeleton [Term] id: UBERON:0015025 name: manual digit 1 phalanx endochondral element namespace: uberon def: "A manual digit 1 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 1 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 1 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit I phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015024 ! manual digit phalanx endochondral element relationship: part_of UBERON:5101463 ! manual digit 1 digitopodial skeleton [Term] id: UBERON:0015026 name: manual digit 2 phalanx endochondral element namespace: uberon def: "A manual digit 2 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 2 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 2 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit II phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015024 ! manual digit phalanx endochondral element relationship: part_of UBERON:5103622 ! manual digit 2 digitopodial skeleton [Term] id: UBERON:0015027 name: manual digit 3 phalanx endochondral element namespace: uberon def: "A manual digit 3 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 3 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 3 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit III phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015024 ! manual digit phalanx endochondral element relationship: part_of UBERON:5103623 ! manual digit 3 digitopodial skeleton [Term] id: UBERON:0015028 name: manual digit 4 phalanx endochondral element namespace: uberon def: "A manual digit 4 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 4 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 4 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit IV phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015024 ! manual digit phalanx endochondral element relationship: part_of UBERON:5103624 ! manual digit 4 digitopodial skeleton [Term] id: UBERON:0015029 name: manual digit 5 phalanx endochondral element namespace: uberon def: "A manual digit 5 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 5 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 5 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit V phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015024 ! manual digit phalanx endochondral element relationship: part_of UBERON:5103625 ! manual digit 5 digitopodial skeleton [Term] id: UBERON:0015030 name: pedal digit phalanx endochondral element namespace: uberon def: "A pedal digit phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element is_a: UBERON:0015023 ! phalanx endochondral element relationship: part_of UBERON:0010696 ! skeleton of pedal acropodium relationship: part_of UBERON:5101466 ! pedal digit digitopodial skeleton [Term] id: UBERON:0015031 name: pedal digit 1 phalanx endochondral element namespace: uberon def: "A pedal digit 1 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 1 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 1 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit I phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015030 ! pedal digit phalanx endochondral element relationship: part_of UBERON:5103631 ! pedal digit 1 digitopodial skeleton [Term] id: UBERON:0015032 name: pedal digit 2 phalanx endochondral element namespace: uberon def: "A pedal digit 2 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 2 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 2 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit II phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015030 ! pedal digit phalanx endochondral element relationship: part_of UBERON:5103632 ! pedal digit 2 digitopodial skeleton [Term] id: UBERON:0015033 name: pedal digit 3 phalanx endochondral element namespace: uberon def: "A pedal digit 3 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 3 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 3 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit III phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015030 ! pedal digit phalanx endochondral element relationship: part_of UBERON:5103633 ! pedal digit 3 digitopodial skeleton [Term] id: UBERON:0015034 name: pedal digit 4 phalanx endochondral element namespace: uberon def: "A pedal digit 4 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 4 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 4 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit IV phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015030 ! pedal digit phalanx endochondral element relationship: part_of UBERON:5103634 ! pedal digit 4 digitopodial skeleton [Term] id: UBERON:0015035 name: pedal digit 5 phalanx endochondral element namespace: uberon def: "A pedal digit 5 phalanx bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 5 phalanx element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 5 phalanx skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit V phalanx endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015030 ! pedal digit phalanx endochondral element relationship: part_of UBERON:5103635 ! pedal digit 5 digitopodial skeleton [Term] id: UBERON:0015036 name: pedal digit metatarsal endochondral element namespace: uberon def: "A pedal digit metatarsal bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit metatarsal element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit metatarsal skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0012152 ! skeleton of pedal digitopodium [Term] id: UBERON:0015037 name: pedal digit 1 metatarsal endochondral element namespace: uberon def: "A pedal digit 1 metatarsal bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 1 metatarsal element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 1 metatarsal skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit I metatarsal endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:5103631 ! pedal digit 1 digitopodial skeleton [Term] id: UBERON:0015038 name: pedal digit 2 metatarsal endochondral element namespace: uberon def: "A pedal digit 2 metatarsal bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 2 metatarsal element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 2 metatarsal skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit II metatarsal endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:5103632 ! pedal digit 2 digitopodial skeleton [Term] id: UBERON:0015039 name: pedal digit 3 metatarsal endochondral element namespace: uberon def: "A pedal digit 3 metatarsal bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 3 metatarsal element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 3 metatarsal skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit III metatarsal endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:5103633 ! pedal digit 3 digitopodial skeleton [Term] id: UBERON:0015040 name: pedal digit 4 metatarsal endochondral element namespace: uberon def: "A pedal digit 4 metatarsal bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 4 metatarsal element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 4 metatarsal skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit IV metatarsal endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:5103634 ! pedal digit 4 digitopodial skeleton [Term] id: UBERON:0015041 name: pedal digit 5 metatarsal endochondral element namespace: uberon def: "A pedal digit 5 metatarsal bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 5 metatarsal element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit 5 metatarsal skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pedal digit V metatarsal endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015036 ! pedal digit metatarsal endochondral element relationship: part_of UBERON:5103635 ! pedal digit 5 digitopodial skeleton [Term] id: UBERON:0015042 name: manual digit metacarpus endochondral element namespace: uberon def: "A manual digit metacarpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit metacarpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit metacarpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0012151 ! skeleton of manual digitopodium [Term] id: UBERON:0015043 name: manual digit 1 metacarpus endochondral element namespace: uberon def: "A manual digit 1 metacarpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 1 metacarpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 1 metacarpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit I metacarpus endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:5101463 ! manual digit 1 digitopodial skeleton [Term] id: UBERON:0015044 name: manual digit 2 metacarpus endochondral element namespace: uberon def: "A manual digit 2 metacarpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 2 metacarpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 2 metacarpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit II metacarpus endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:5103622 ! manual digit 2 digitopodial skeleton [Term] id: UBERON:0015045 name: manual digit 3 metacarpus endochondral element namespace: uberon def: "A manual digit 3 metacarpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 3 metacarpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 3 metacarpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit III metacarpus endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:5103623 ! manual digit 3 digitopodial skeleton [Term] id: UBERON:0015046 name: manual digit 4 metacarpus endochondral element namespace: uberon def: "A manual digit 4 metacarpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 4 metacarpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 4 metacarpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit IV metacarpus endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:5103624 ! manual digit 4 digitopodial skeleton [Term] id: UBERON:0015047 name: manual digit 5 metacarpus endochondral element namespace: uberon def: "A manual digit 5 metacarpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 5 metacarpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit 5 metacarpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "manual digit V metacarpus endochondral element" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0015042 ! manual digit metacarpus endochondral element relationship: part_of UBERON:5103625 ! manual digit 5 digitopodial skeleton [Term] id: UBERON:0015049 name: carpus endochondral element namespace: uberon def: "A carpus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "carpus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "carpus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015050 name: tarsus endochondral element namespace: uberon def: "A tarsus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tarsus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "tarsus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015052 name: femur endochondral element namespace: uberon def: "A femur bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "femur element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "femur skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015022 ! hindlimb endochondral element relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0015053 name: humerus endochondral element namespace: uberon def: "A humerus bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "humerus element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "humerus skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] is_a: UBERON:0015021 ! forelimb endochondral element relationship: part_of UBERON:0001440 ! forelimb skeleton [Term] id: UBERON:0015054 name: iliac endochondral element namespace: uberon def: "An iliac bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "iliac element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "iliac skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:0015055 name: pubic endochondral element namespace: uberon def: "A pubic bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pubic element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "pubic skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:0015056 name: ischial endochondral element namespace: uberon def: "An ischial bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "ischial element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "ischial skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:0015057 name: scapula endochondral element namespace: uberon def: "A scapula bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "scapula element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "scapula skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] relationship: part_of UBERON:0007831 ! pectoral girdle skeleton [Term] id: UBERON:0015061 name: limb endochondral element namespace: uberon def: "A limb bone or its cartilage or pre-cartilage precursor." [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "limb bone endochondral element" EXACT [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] synonym: "limb bone skeletal element" BROAD [https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern] relationship: part_of UBERON:0004381 ! skeleton of limb [Term] id: UBERON:0015063 name: autopod endochondral element namespace: uberon def: "An endochondral element that is part of a autopod region." [OBOL:automatic] is_a: UBERON:0015061 ! limb endochondral element relationship: part_of UBERON:0006717 {source="cjm"} ! autopodial skeleton property_value: UBPROP:0000006 https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern [Term] id: UBERON:0015064 name: autopod cartilage namespace: uberon def: "An autopod endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0010881 ! limb cartilage element is_a: UBERON:0015063 ! autopod endochondral element property_value: UBPROP:0000006 https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern [Term] id: UBERON:0015067 name: centrale endochondral element namespace: uberon def: "Endochondral element located between the proximal and distal rows of carpals or tarsals and thus representing the central carpals or tarsals[PHENOSCAPE]." [PHENOSCAPE:AMAO] synonym: "central mesopodium element" EXACT [UBERON:0012131] synonym: "centralia" RELATED OMO:0003004 [UBERON:0012131] is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0009878 ! mesopodial skeleton property_value: IAO:0000232 "This term corresponds both to the navicular bone in the pes and the similar central carpals in the manus" xsd:string property_value: UBPROP:0000012 "the FMA term is under 'general anatomical term'." xsd:string {external_ontology="FMA"} [Term] id: UBERON:0015068 name: distal carpal endochondral element namespace: uberon def: "A distal mesopodial endochondral element that is part of a forelimb." [OBOL:automatic] synonym: "distal carpal" RELATED SYSTEMATIC [AAO:0000847, UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element is_a: UBERON:0018099 ! distal mesopodial endochondral element relationship: part_of UBERON:0009880 {source="skeleton pattern"} ! carpal skeleton [Term] id: UBERON:0015069 name: distal carpal cartilage element namespace: uberon def: "A distal carpal endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015068 ! distal carpal endochondral element is_a: UBERON:0018100 ! distal mesopodial cartilage element is_a: UBERON:0035128 ! manus cartilage element [Term] id: UBERON:0015077 name: centrale cartilage namespace: uberon def: "A centrale endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015064 ! autopod cartilage is_a: UBERON:0015067 ! centrale endochondral element [Term] id: UBERON:0015078 name: proximal carpal endochondral element namespace: uberon def: "A proximal mesopodial endochondral element that is part of a forelimb." [OBOL:automatic] synonym: "proximal carpal" RELATED SYSTEMATIC [UBERON:cjm] synonym: "proximal carpal element" EXACT [UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element is_a: UBERON:0017750 ! proximal mesopodial endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015079 name: proximal carpal cartilage namespace: uberon def: "A proximal carpal endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015078 ! proximal carpal endochondral element is_a: UBERON:0017751 ! proximal mesopodial cartilage element is_a: UBERON:0035128 ! manus cartilage element relationship: part_of UBERON:0001442 ! skeleton of manus [Term] id: UBERON:0015080 name: proximal carpal bone pre-cartilage condensation namespace: uberon def: "A proximal carpal endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015078 ! proximal carpal endochondral element relationship: part_of UBERON:0001442 ! skeleton of manus [Term] id: UBERON:0015081 name: proximal tarsal endochondral element namespace: uberon def: "A proximal mesopodial endochondral element that is part of a hindlimb." [OBOL:automatic] synonym: "proximal tarsal" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015050 ! tarsus endochondral element is_a: UBERON:0017750 ! proximal mesopodial endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015082 name: proximal tarsal cartilage namespace: uberon def: "A proximal tarsal endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015081 ! proximal tarsal endochondral element is_a: UBERON:0017751 ! proximal mesopodial cartilage element is_a: UBERON:0035129 ! pes cartilage element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015083 name: proximal tarsal bone pre-cartilage condensation namespace: uberon def: "A proximal tarsal endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010886 ! hindlimb pre-cartilage condensation is_a: UBERON:0015081 ! proximal tarsal endochondral element [Term] id: UBERON:0015084 name: distal carpal bone 1 endochondral element namespace: uberon synonym: "distal carpal 1" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015085 name: distal carpal bone 1 cartilage namespace: uberon def: "A distal carpal bone 1 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015084 ! distal carpal bone 1 endochondral element is_a: UBERON:0035128 ! manus cartilage element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015086 name: distal carpal bone 1 pre-cartilage condensation namespace: uberon def: "A distal carpal bone 1 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015084 ! distal carpal bone 1 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015087 name: distal carpal bone 2 endochondral element namespace: uberon synonym: "distal carpal 2" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015088 name: distal carpal bone 2 cartilage namespace: uberon def: "A distal carpal bone 2 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015087 ! distal carpal bone 2 endochondral element is_a: UBERON:0035128 ! manus cartilage element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015089 name: distal carpal bone 2 pre-cartilage condensation namespace: uberon def: "A distal carpal bone 2 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015087 ! distal carpal bone 2 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015090 name: distal carpal bone 3 endochondral element namespace: uberon synonym: "distal carpal 3" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015091 name: distal carpal bone 3 cartilage namespace: uberon def: "A distal carpal bone 3 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015090 ! distal carpal bone 3 endochondral element is_a: UBERON:0035128 ! manus cartilage element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015092 name: distal carpal bone 3 pre-cartilage condensation namespace: uberon def: "A distal carpal bone 3 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015090 ! distal carpal bone 3 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015093 name: distal carpal bone 4 endochondral element namespace: uberon synonym: "distal carpal 4" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015094 name: distal carpal bone 4 cartilage namespace: uberon def: "A distal carpal bone 4 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015093 ! distal carpal bone 4 endochondral element is_a: UBERON:0035128 ! manus cartilage element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015095 name: distal carpal bone 4 pre-cartilage condensation namespace: uberon def: "A distal carpal bone 4 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015093 ! distal carpal bone 4 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015096 name: distal carpal bone 5 endochondral element namespace: uberon synonym: "distal carpal 5" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015097 name: distal carpal bone 5 cartilage namespace: uberon def: "A distal carpal bone 5 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015096 ! distal carpal bone 5 endochondral element is_a: UBERON:0035128 ! manus cartilage element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015098 name: distal carpal bone 5 pre-cartilage condensation namespace: uberon def: "A distal carpal bone 5 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010884 ! forelimb bone pre-cartilage condensation is_a: UBERON:0015096 ! distal carpal bone 5 endochondral element relationship: part_of UBERON:0009880 ! carpal skeleton [Term] id: UBERON:0015099 name: distal tarsal endochondral element namespace: uberon def: "A distal mesopodial endochondral element that is part of a hindlimb." [OBOL:automatic] synonym: "distal tarsal" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015050 ! tarsus endochondral element is_a: UBERON:0018099 ! distal mesopodial endochondral element relationship: part_of UBERON:0009879 {source="skeleton pattern"} ! tarsal skeleton [Term] id: UBERON:0015100 name: distal tarsal cartilage namespace: uberon def: "A distal tarsal endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015099 ! distal tarsal endochondral element is_a: UBERON:0018100 ! distal mesopodial cartilage element is_a: UBERON:0035129 ! pes cartilage element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015101 name: distal tarsal bone pre-cartilage condensation namespace: uberon def: "A distal tarsal endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010886 ! hindlimb pre-cartilage condensation is_a: UBERON:0015099 ! distal tarsal endochondral element is_a: UBERON:0018101 ! distal mesopodial pre-cartilage condensation relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015102 name: distal tarsal bone 1 endochondral element namespace: uberon synonym: "distal tarsal 1" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015099 ! distal tarsal endochondral element [Term] id: UBERON:0015103 name: distal tarsal bone 1 cartilage namespace: uberon def: "A distal tarsal bone 1 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "distal tarsal 1 cartilage" EXACT [UBERON:cjm] synonym: "distal tarsal 1 cartilage element" EXACT SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015100 ! distal tarsal cartilage is_a: UBERON:0015102 ! distal tarsal bone 1 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015104 name: distal tarsal bone 1 pre-cartilage condensation namespace: uberon def: "A distal tarsal bone 1 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0015101 ! distal tarsal bone pre-cartilage condensation is_a: UBERON:0015102 ! distal tarsal bone 1 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015105 name: distal tarsal bone 2 endochondral element namespace: uberon synonym: "distal tarsal 2" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015099 ! distal tarsal endochondral element [Term] id: UBERON:0015106 name: distal tarsal bone 2 cartilage namespace: uberon def: "A distal tarsal bone 2 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] synonym: "distal tarsal 2 cartilage" EXACT [UBERON:cjm] synonym: "distal tarsal 2 cartilage element" EXACT SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015100 ! distal tarsal cartilage is_a: UBERON:0015105 ! distal tarsal bone 2 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015107 name: distal tarsal bone 2 pre-cartilage condensation namespace: uberon def: "A distal tarsal bone 2 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0015101 ! distal tarsal bone pre-cartilage condensation is_a: UBERON:0015105 ! distal tarsal bone 2 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015108 name: distal tarsal bone 3 endochondral element namespace: uberon synonym: "distal tarsal 3" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015099 ! distal tarsal endochondral element [Term] id: UBERON:0015109 name: distal tarsal bone 3 cartilage namespace: uberon def: "A distal tarsal bone 3 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015100 ! distal tarsal cartilage is_a: UBERON:0015108 ! distal tarsal bone 3 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015110 name: distal tarsal bone 3 pre-cartilage condensation namespace: uberon def: "A distal tarsal bone 3 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0015101 ! distal tarsal bone pre-cartilage condensation is_a: UBERON:0015108 ! distal tarsal bone 3 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015111 name: distal tarsal bone 4 endochondral element namespace: uberon synonym: "distal tarsal 4" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015099 ! distal tarsal endochondral element [Term] id: UBERON:0015112 name: distal tarsal bone 4 cartilage namespace: uberon def: "A distal tarsal bone 4 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015100 ! distal tarsal cartilage is_a: UBERON:0015111 ! distal tarsal bone 4 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015113 name: distal tarsal bone 4 pre-cartilage condensation namespace: uberon def: "A distal tarsal bone 4 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0015101 ! distal tarsal bone pre-cartilage condensation is_a: UBERON:0015111 ! distal tarsal bone 4 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015114 name: distal tarsal bone 5 endochondral element namespace: uberon synonym: "distal tarsal 5" RELATED SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015099 ! distal tarsal endochondral element [Term] id: UBERON:0015115 name: distal tarsal bone 5 cartilage namespace: uberon def: "A distal tarsal bone 5 endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015100 ! distal tarsal cartilage is_a: UBERON:0015114 ! distal tarsal bone 5 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015116 name: distal tarsal bone 5 pre-cartilage condensation namespace: uberon def: "A distal tarsal bone 5 endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0015101 ! distal tarsal bone pre-cartilage condensation is_a: UBERON:0015114 ! distal tarsal bone 5 endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0015180 name: neck of talus namespace: uberon def: "The neck of talus is directed forward and medialward, and comprises the constricted portion of the bone between the body and the oval head. Its upper and medial surfaces are rough, for the attachment of ligaments; its lateral surface is concave and is continuous below with the deep groove for the interosseous talocalcaneal ligament." [Wikipedia:Neck_of_talus] subset: human_reference_atlas subset: pheno_slim synonym: "collum tali" RELATED [Wikipedia:Neck_of_talus] synonym: "talar neck" EXACT [FMA:33636] synonym: "talus neck" EXACT [FMA:33636] xref: FMA:33636 xref: SCTID:182104001 xref: Wikipedia:Neck_of_talus relationship: part_of UBERON:0002395 ! talus property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0016413 name: medullary cavity of long bone namespace: uberon subset: pheno_slim synonym: "central medullary cavity of long bone" RELATED [FMA:24023] xref: FMA:24023 relationship: part_of UBERON:0002495 ! long bone [Term] id: UBERON:0016422 name: compact bone of long bone namespace: uberon def: "A compact bone tissue that is part of a bone tissue of long bone." [OBOL:automatic] subset: pheno_slim xref: FMA:32674 is_a: UBERON:0005808 ! bone tissue of long bone relationship: part_of UBERON:0005808 ! bone tissue of long bone [Term] id: UBERON:0016423 name: compact bone of diaphysis namespace: uberon def: "A compact bone tissue that is part of a diaphysis." [OBOL:automatic] subset: pheno_slim xref: FMA:32678 is_a: UBERON:0005808 ! bone tissue of long bone relationship: part_of UBERON:0004769 ! diaphysis [Term] id: UBERON:0016425 name: epiphyseal plate of radius namespace: uberon def: "An epiphyseal plate that is part of a radius bone." [OBOL:automatic] subset: pheno_slim xref: FMA:34354 is_a: UBERON:0002516 ! epiphyseal plate is_a: UBERON:0007390 ! pectoral appendage cartilage tissue relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:0016497 name: epicondyle of humerus namespace: uberon def: "An epicondyle that is part of a humerus." [OBOL:automatic] xref: FMA:321693 xref: NCIT:C114187 xref: SCTID:272693008 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0016876 name: digit 6 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 6 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 6" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 6 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit VI digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:0016877 name: digit 7 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 7 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 7" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 7 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit VII digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:0016878 name: digit 8 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 8 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 8" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 8 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit VIII digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:0016896 name: periosteum of long bone namespace: uberon def: "A periosteum that is part of a long bone." [OBOL:automatic] synonym: "long bone periosteum" EXACT [FMA:32677] xref: FMA:32677 relationship: part_of UBERON:0002495 ! long bone [Term] id: UBERON:0016928 name: metaphysis of fibula namespace: uberon def: "A metaphysis that is part of a fibula." [UBERON:nv] synonym: "fibula metaphysis" EXACT [FMA:33745] synonym: "fibular metaphysis" EXACT [] xref: FMA:33745 is_a: UBERON:0001438 ! metaphysis relationship: part_of UBERON:0001446 ! fibula [Term] id: UBERON:0017261 name: intertarsal sesamoid namespace: uberon def: "A sesamoid element that is part of a tarsal skeleton." [OBOL:automatic] synonym: "tarsal sesamoid" RELATED [] is_a: UBERON:0011141 ! appendicular ossicle relationship: part_of UBERON:0009879 ! tarsal skeleton [Term] id: UBERON:0017750 name: proximal mesopodial endochondral element namespace: uberon def: "A mesopodial endochondral element that is in the most proximal part of the mesopodial skeleton, connected to the zeugopodial skeleton." [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0009878 ! mesopodial skeleton property_value: IAO:0000116 "awaiting approval by phenoscape curators" xsd:string [Term] id: UBERON:0017751 name: proximal mesopodial cartilage element namespace: uberon def: "A proximal mesopodial endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015064 ! autopod cartilage is_a: UBERON:0017750 ! proximal mesopodial endochondral element [Term] id: UBERON:0018099 name: distal mesopodial endochondral element namespace: uberon def: "An endochondral element in the distal portion of the mesopodial skeleton, between the central mesopodial skeleton and the metapodial skeleton." [http://orcid.org/0000-0002-6601-2165] synonym: "distal mesopodial" EXACT SYSTEMATIC [UBERON:cjm] is_a: UBERON:0015063 ! autopod endochondral element relationship: part_of UBERON:0009878 ! mesopodial skeleton property_value: IAO:0000116 "TODO add logical definition" xsd:string [Term] id: UBERON:0018100 name: distal mesopodial cartilage element namespace: uberon def: "A distal mesopodial endochondral element that is composed primarily of cartilage tissue." [OBOL:automatic] is_a: UBERON:0015064 ! autopod cartilage is_a: UBERON:0018099 ! distal mesopodial endochondral element [Term] id: UBERON:0018101 name: distal mesopodial pre-cartilage condensation namespace: uberon def: "A distal mesopodial endochondral element that is composed primarily of a pre-cartilage condensation." [OBOL:automatic] is_a: UBERON:0010882 ! limb bone pre-cartilage condensation is_a: UBERON:0018099 ! distal mesopodial endochondral element [Term] id: UBERON:0018102 name: distal mesopodial bone namespace: uberon def: "A distal mesopodial endochondral element that is composed primarily of a bone tissue." [OBOL:automatic] is_a: UBERON:0003656 ! mesopodium bone is_a: UBERON:0018099 ! distal mesopodial endochondral element [Term] id: UBERON:0018266 name: third phalanx namespace: uberon def: "The third phalangeal bone in a digit ray." [PHENOSCAPE:nizar] is_a: UBERON:0003221 ! phalanx property_value: IAO:0000116 "to be discussed. Should this class be used for the distal phalanges on a 3-phalanx ray (e.g. human finger 2?)" xsd:string [Term] id: UBERON:0018305 name: bicipital surface namespace: uberon def: "Region of the humerus associated with the biceps attachment areas." [PHENOSCAPE:Nizar] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:0018316 name: cuboid facet of calcaneum namespace: uberon def: "Facet on the anterior surface of the calcaneus (as called calcaneum) for the articulation of the cuboid bone." [PHENOSCAPE:Alex] relationship: part_of UBERON:0001450 ! calcaneus [Term] id: UBERON:0018322 name: fourth phalanx namespace: uberon def: "Fourth most proximal phalanx in manual or pedal digits." [PHENOSCAPE:alex] is_a: UBERON:0003221 ! phalanx property_value: RO:0002161 NCBITaxon:9606 [Term] id: UBERON:0018326 name: ilioischiadic foramen namespace: uberon def: "Situated just caudal to the acetabulum, the foramen is bound dorsally by the illium and ventrally by the ischium. The foramen transmitts the ischiadic nerves and vessels (Baumel et al. 1993)." [PHENOSCAPE:alex] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:0018362 name: supracondylar tubercle namespace: uberon def: "Anatomical projection on the distal region of the femur or humerus and close to the condyles." [PHENOSCAPE:Nizar] comment: found on femur or humerus relationship: part_of UBERON:0011583 ! stylopodial skeleton [Term] id: UBERON:0018371 name: ventral supracondylar tubercle namespace: uberon def: "Tubercle on the distal humerus for the origin of the Lig. collaterale ventral of the elbow joint. Modified from Baumel et al. 1993." [PHENOSCAPE:Alex, PHENOSCAPE:Nizar] is_a: UBERON:4200177 ! supracondyle tubercle [Term] id: UBERON:0018372 name: dorsal supracondylar tubercle namespace: uberon def: "Tubercle on the dorsal border of the distal humerus, a short distance from the dorsal epicondyle, for the origin of the m extensor carpe radialis modifeid from Baumel et al. 1993." [PHENOSCAPE:Alex, PHENOSCAPE:Nizar] is_a: UBERON:4200177 ! supracondyle tubercle [Term] id: UBERON:0018667 name: neck of scapula namespace: uberon synonym: "anatomical neck of scapula" EXACT [FMA:23254] synonym: "collum scapulae" EXACT [] synonym: "scapular neck" EXACT [FMA:23254] xref: FMA:23254 xref: SCTID:181915009 relationship: part_of UBERON:0006849 ! scapula [Term] id: UBERON:0018673 name: neck of fibula namespace: uberon subset: human_reference_atlas synonym: "fibula neck" EXACT [FMA:35508] synonym: "fibular neck" EXACT [] xref: EMAPA:37891 {source="MA:th"} xref: FMA:35508 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001446 ! fibula property_value: RO:0002175 NCBITaxon:9606 [Term] id: UBERON:0035128 name: manus cartilage element namespace: uberon synonym: "hand cartilage condensation" EXACT [EMAPA:32631] xref: EMAPA:32631 is_a: UBERON:0010883 ! forelimb cartilage element is_a: UBERON:0015064 ! autopod cartilage [Term] id: UBERON:0035129 name: pes cartilage element namespace: uberon synonym: "foot cartilage condensation" EXACT [EMAPA:32657] xref: EMAPA:32657 is_a: UBERON:0010885 ! hindlimb cartilage element is_a: UBERON:0015064 ! autopod cartilage [Term] id: UBERON:0035561 name: styliform element namespace: uberon def: "An unjointed, rod-like bony or cartilaginous structures that extend from distal limb joints in tetrapods." [DOI:10.1038/nature14423, https://github.com/obophenotype/uberon/issues/695] is_a: UBERON:0015021 ! forelimb endochondral element relationship: part_of UBERON:0001440 ! forelimb skeleton property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/alex-dececchi property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/balhoff property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/cmungall property_value: http://purl.org/dc/elements/1.1/contributor https://github.com/RDruzinsky property_value: UBPROP:0000008 "in some mammals this is found in a cartilaginous state, and articulates with the lateral border of the carpus." xsd:string [Term] id: UBERON:0035878 name: subchondral region of epiphysis namespace: uberon def: "The bone region of the epiphysis that provides underlying mechanical and physiological support for the cartilage of joint articular surfaces." [https://github.com/obophenotype/uberon/issues/1195, MGI:csmith, PMID:20392241, PMID:24084727] synonym: "subchondral bone" EXACT [] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001437 {source="MGI:csmith"} ! epiphysis [Term] id: UBERON:1500000 name: scapular blade namespace: uberon def: "Enlarged and broad extension of the scapula distal to the glenoid region that conforms to the contour of the ribs. Origin for the major shoulder muscles including the deltoid group." [PHENOSCAPE] comment: In non-tetrapod sarcopterygians the role of the scapula blade is filled by the enlarge cleithrum. relationship: part_of UBERON:0006849 ! scapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:1500005 name: ischial cartilage namespace: uberon def: "Paired cartilaginous element forming the posterior portion of the pelvic girdle [D.F. Markle, BULLETIN OF MARINE SCIENCE. 30(1): 45-53. 1980]." [PHENOSCAPE] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:1500006 name: paired fin radial bone namespace: uberon def: "Paired fin radial element that is composed of bone tissue." [https://github.com/obophenotype/uberon/issues/251, OBOL:automatic] is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:1600006 ! paired fin radial element relationship: part_of UBERON:4300013 ! paired fin radial skeleton [Term] id: UBERON:1500007 name: mesopterygium cartilage namespace: uberon def: "The median, elongated basal cartilage of the pectoral fin." [PHENOSCAPE] comment: Relevant for Elasmobranchii, Holocephali and primitive Teleostomi. {xref="http://www.briancoad.com/dictionary/DicPics/mesopterygium.htm"} is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage is_a: UBERON:4300081 ! mesopterygium element [Term] id: UBERON:1500008 name: pelvic fin distal radial bone namespace: uberon def: "Pelvic fin radial that develops from the pelvic fin endoskeletal disc. Pelvic fin distal radials are paired." [PHENOSCAPE] comment: Placeholder definition, fix me. is_a: UBERON:1600008 ! pelvic fin distal radial element is_a: UBERON:2000508 ! pelvic fin radial bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-9114-8737 [Term] id: UBERON:1500009 name: pelvic fin basipterygial radial namespace: uberon def: "Pelvic fin radial that is an endochondral fused radials or pterygiophores at the base of the pelvic fin." [http://www.briancoad.com/dictionary/complete%20dictionary.htm] is_a: UBERON:2000508 ! pelvic fin radial bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-9114-8737 [Term] id: UBERON:1500010 name: pelvic fin middle radial bone namespace: uberon def: "Pelvic fin radial in the middle of the pelvic fin." [PHENOSCAPE] comment: placeholder def, fix me. is_a: UBERON:2000508 ! pelvic fin radial bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-9114-8737 [Term] id: UBERON:1600006 name: paired fin radial element namespace: uberon def: "Radial element that is part of a paired fin." [PHENOSCAPE] relationship: part_of UBERON:4300013 ! paired fin radial skeleton [Term] id: UBERON:1600008 name: pelvic fin distal radial element namespace: uberon def: "Pelvic fin radial element that develops from the pelvic fin endoskeletal disc. Pelvic fin distal radial elements are paired." [PHENOSCAPE] comment: Placeholder definition, fix me. is_a: UBERON:2100508 ! pelvic fin radial element [Term] id: UBERON:1600010 name: pelvic fin middle radial element namespace: uberon def: "Pelvic fin radial element in the middle of the pelvic fin." [PHENOSCAPE] comment: placeholder def, fix me. is_a: UBERON:2100508 ! pelvic fin radial element [Term] id: UBERON:1700006 name: paired fin radial cartilage namespace: uberon def: "Paired fin radial element that is composed of cartilage tissue." [https://github.com/obophenotype/uberon/issues/251, OBOL:automatic] is_a: UBERON:1600006 ! paired fin radial element [Term] id: UBERON:2000239 name: mesocoracoid bone namespace: uberon def: "Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Meoscoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired." [TAO:wd] synonym: "mesocoracoideum" RELATED [TAO:0000239] xref: ZFA:0000239 is_a: UBERON:0007829 ! pectoral girdle bone is_a: UBERON:4300092 ! mesocoracoid element property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2000410 name: postcleithrum namespace: uberon def: "Dermal bone placed postero-medially to the supracleithrum and/or cleithrum." [TAO:GA_TG, TAO:wd] comment: Commonly, the postcleithra form a bilateral series including one to three flat, thin postcleithra of variable shapes (in teleosts). Basal teleosts may have a series up to seven postcleithra (see Arratia 1984 and 1997 and references herein). synonym: "métacleithrum" EXACT [PSPUB:0000131] synonym: "métaclithrum" EXACT [PSPUB:0000131] synonym: "paraclithrum" EXACT [PSPUB:0000143] synonym: "postclavicle" EXACT [TAO:0000410] synonym: "postcleithra" EXACT OMO:0003004 [TAO:0000410] synonym: "postcleithrum" EXACT [PSPUB:0000164] xref: ZFA:0000410 is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2000508 name: pelvic fin radial bone namespace: uberon def: "Pelvic fin radial element that is composed of bone tissue." [OBOL:automatic] synonym: "pelvic actinost" EXACT [TAO:0000508] synonym: "pelvic radial" EXACT [TAO:0000508] xref: ZFA:0000508 is_a: UBERON:0010742 ! bone of pelvic complex is_a: UBERON:1500006 ! paired fin radial bone is_a: UBERON:2100508 ! pelvic fin radial element [Term] id: UBERON:2000544 name: pectoral fin actinotrichium namespace: uberon def: "Actinotrichium that is part of the pectoral fin." [TAO:wd] xref: ZFA:0005545 relationship: part_of UBERON:0010710 ! pectoral fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2000549 name: posttemporal namespace: uberon def: "Dermal bone of the secondary pectoral girdle that attaches the girdle to the skull. Its dorsal process attaches to the epiotic or epioccipital, the ventral process to the intercalar and the body articulates with the supracleithrum. The postotic sensory canal or lateral line runs within or lateral to bone." [TAO:GA_TG] comment: The posttemporal is commonly a Y-shaped bone with two elongate processes. The dorsal process may be equal or longer than the ventral process or the opposite. The ventral process may be absent in some teleosts. synonym: "post-temporal" EXACT [TAO:0000549] synonym: "postemporal" EXACT [TAO:0000549] synonym: "posttemporale" EXACT [TAO:0000549] synonym: "suprascapula" RELATED [TAO:0000549] xref: ZFA:0000549 is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2000594 name: supracleithrum namespace: uberon def: "Dermal bone that articulates dorsally with the posttemporal and ventrally with the cleithrum. Supracleithrum is part of the secondary pectoral girdle and commonly, carries part of the lateral line canal." [TAO:GA_TG, TAO:wd] comment: The dorsalmost postcleithrum or postcleithrum 1 may lie medial to the ventral part of the supracleithrum. The postotic canal or lateral line may run close to the dorsal margin or in the upper third or in the lowest third of the bone depending on the fish group. synonym: "hypercleithrum" EXACT [PSPUB:0000131] synonym: "supracleithra" EXACT OMO:0003004 [TAO:0000594] synonym: "supracleithrum" EXACT [PSPUB:0000164] synonym: "épiclithrum" EXACT [PSPUB:0000132] xref: ZFA:0000594 is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2000596 name: pelvic fin actinotrichium namespace: uberon def: "Actinotrichium that is part of the pelvic fin." [TAO:wd] xref: ZFA:0005546 relationship: part_of UBERON:0010711 ! pelvic fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2000623 name: basipterygium bone namespace: uberon def: "Basipterygium element that is composed of bone tissue." [OBOL:automatic] synonym: "basipterygia" EXACT OMO:0003004 [TAO:0000623] synonym: "basipterygium ischiatique" EXACT [PSPUB:0000145] synonym: "os pelvien" EXACT [PSPUB:0000164] synonym: "pelvic bone" RELATED [TAO:0000623] synonym: "pelvic plate" EXACT [] synonym: "pubic plate" EXACT [] xref: ZFA:0000623 is_a: UBERON:0007830 ! pelvic girdle bone/zone is_a: UBERON:2100623 ! basipterygium element [Term] id: UBERON:2000663 name: extrascapula namespace: uberon alt_id: UBERON:2001413 def: "Dermal canal-bearing bone placed at the dorso-posterior region of the skull roof, lying on the posterior region of the pterotic and parietals, or the pterotic and epioccipital, or on the pterotic, epioccipital and occipital bones." [TAO:GA_TG, TAO:wd] comment: When it is present, the paired series of extrascapular bones may include one pair or two pairs or two pairs plus a median one. The most lateral is named lateral extrascapula and is the bone where the intersection of the otic, postotic and extrascapular or supratemporal canals occur. The medial and median extrascapulars carry the extrascapular or supratemporal canal. synonym: "extrascapular" EXACT [TAO:0000663] synonym: "extrascapular bone" EXACT [TAO:0000663] synonym: "scale bone" EXACT [TAO:0000663] synonym: "supratemporal" RELATED [TAO:0000663] synonym: "tabular" RELATED [TAO:Harrington_1955, TAO:Weitzman_1962] xref: ZFA:0000663 is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001415 name: pelvic fin distal radial bone 2 namespace: uberon def: "Pelvic fin distal radial 2 element that is composed of bone tissue." [OBOL:automatic] xref: ZFA:0001415 is_a: UBERON:1500008 ! pelvic fin distal radial bone is_a: UBERON:2101415 ! pelvic fin distal radial element 2 [Term] id: UBERON:2001416 name: pelvic fin distal radial bone 3 namespace: uberon def: "Pelvic fin distal radial 3 element that is composed of bone tissue." [OBOL:automatic] xref: ZFA:0001416 is_a: UBERON:1500008 ! pelvic fin distal radial bone is_a: UBERON:2101416 ! pelvic fin distal radial element 3 [Term] id: UBERON:2001417 name: pelvic fin distal radial bone 1 namespace: uberon def: "Pelvic fin distal radial 1 element that is composed of bone tissue." [OBOL:automatic] xref: ZFA:0001417 is_a: UBERON:1500008 ! pelvic fin distal radial bone is_a: UBERON:2101417 ! pelvic fin distal radial element 1 [Term] id: UBERON:2001456 name: pectoral fin endoskeletal disc namespace: uberon def: "A plate-like chondrogenic condensation within the pectoral fin, which subdivides into individual radials by decomposition of extracellular matrix in the inter-radial mesenchyme (Grandel and Schulte-Merker, 1998)." [ZFIN:curator] synonym: "fin plate cartilage" EXACT [TAO:0001456] xref: ZFA:0001456 is_a: UBERON:0007390 ! pectoral appendage cartilage tissue property_value: RO:0002161 NCBITaxon:40674 {source="https://github.com/obophenotype/uberon/issues/2050"} property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001537 name: mesocoracoid cartilage namespace: uberon def: "Pectoral fin cartilage that is part of the embryonic primary pectoral girdle from which the mesocoracoid bone will ossify endochondrally." [TAO:GA_TG, ZFIN:curator] synonym: "mesocoracoideum" RELATED [TAO:0001537] xref: ZFA:0001537 is_a: UBERON:4300092 ! mesocoracoid element property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001539 name: basipterygium cartilage namespace: uberon def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the abdomen (present at 7.9 mm). Their posterior tips expand laterally, forming L-shaped cartilages. Medially, a posterior spur of cartilage develops, which will later ossify as the ischiac process (Weitzman 1962)." [ZFIN:curator] xref: ZFA:0001539 is_a: UBERON:2100623 ! basipterygium element property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001586 name: pectoral fin radial bone namespace: uberon def: "Pectoral fin radial element that is composed of bone tissue." [OBOL:automatic] comment: There are two paired series of pectoral radials, the proximal and the distal ones that may have variable shapes and sizes. synonym: "pectoral actinost" EXACT [TAO:0001586] xref: ZFA:0001586 is_a: UBERON:0010741 ! bone of pectoral complex is_a: UBERON:1500006 ! paired fin radial bone is_a: UBERON:2101586 ! pectoral fin radial element [Term] id: UBERON:2001587 name: pectoral fin proximal radial bone namespace: uberon def: "Pectoral fin proximal radial element that is composed of bone tissue." [OBOL:automatic] comment: Two to four flat or slightly rod-like proximal pectoral radials, bilaterally, can be found in teleosts. Pectoral proximal radials are commonly hour-glass or rectangular shaped. The presence of four pectoral proximal radials is interpreted as a synapomorphy of teleosts (Patterson 1977, Arratia 1999). synonym: "pectoral actinost" RELATED [] xref: ZFA:0001587 is_a: UBERON:2001586 ! pectoral fin radial bone is_a: UBERON:2101587 ! pectoral fin proximal radial element [Term] id: UBERON:2001588 name: pectoral fin distal radial bone namespace: uberon def: "Pectoral fin distal radial element that is composed of bone tissue." [OBOL:automatic] comment: A variable number of pectoral distal radials may be present in each pectoral fin. They are commonly small elements, rod-like, round or square shaped. xref: ZFA:0001588 is_a: UBERON:2001586 ! pectoral fin radial bone is_a: UBERON:2101588 ! pectoral fin distal radial element [Term] id: UBERON:2001589 name: propterygium cartilage namespace: uberon def: "The propterygium is the lateralmost or anteriormost basal cartilage that originates from the pectoral fin endoskeletal disc. The bases of the pectoral lepidotrichium 1 plus the propterygium articulates with the scapula." [TAO:GA_TG] comment: The cartilaginous propterygium may partially ossify and fuse to the base of the pectoral hemilepidotrichium 1 in teleosts, but remains as a separate element in non-teleostean fishes. synonym: "pectoral propterygium" EXACT [TAO:0001589] xref: ZFA:0001589 is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage is_a: UBERON:4300083 ! propterygium element property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001734 name: posterior process of basipterygium namespace: uberon def: "Process that is the posteriorly oriented, paired projection of the basipterygium." [TAO:wd] synonym: "ischiac process" EXACT [TAO:0001734] synonym: "ischiatic process" EXACT [TAO:0001734] synonym: "posterior pelvic process" EXACT [http://hdl.handle.net/10088/11710] relationship: part_of UBERON:2000623 ! basipterygium bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001737 name: coracoid foramen namespace: uberon def: "Foramen that is located in the coracoid." [TAO:wd] xref: ZFA:0005426 relationship: part_of UBERON:0004743 ! coracoid bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001761 name: pectoral fin ray 1 namespace: uberon def: "Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched but occasionally may be a massive strong unsegmented element (e.g., spine)." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 1" EXACT [] synonym: "pectoral fin ray 1" EXACT [TAO:0001761] xref: ZFA:0005547 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001762 name: pectoral fin ray 2 namespace: uberon def: "Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray that it is usually branched and segmented." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 2" EXACT [] synonym: "pectoral fin ray 2" EXACT [TAO:0001762] xref: ZFA:0005548 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001763 name: pectoral fin ray 3 namespace: uberon def: "Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray that it is usually branched and segmented." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 3" EXACT [] synonym: "pectoral fin ray 3" EXACT [TAO:0001763] xref: ZFA:0005549 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001764 name: pectoral fin ray 4 namespace: uberon def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray that it is usually branched and segmented." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 4" EXACT [] synonym: "pectoral fin ray 4" EXACT [TAO:0001764] xref: ZFA:0005553 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001765 name: pectoral fin ray 5 namespace: uberon def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray that it is usually branched and segmented." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 5" EXACT [] synonym: "pectoral fin ray 5" EXACT [TAO:0001765] xref: ZFA:0005552 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001766 name: pectoral fin ray 6 namespace: uberon def: "Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray that it is usually branched and segmented." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 6" EXACT [] synonym: "pectoral fin ray 6" EXACT [TAO:0001766] xref: ZFA:0005550 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001767 name: pectoral fin ray 7 namespace: uberon def: "Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray that it is usually branched and segmented." [TAO:GA_TG] synonym: "pectoral fin lepidotrichium 7" EXACT [] synonym: "pectoral fin ray 7" EXACT [TAO:0001767] xref: ZFA:0005551 is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001776 name: pelvic fin ray 1 namespace: uberon synonym: "pelvic fin lepidotrichium 1" EXACT [] xref: ZFA:0005554 is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001777 name: pelvic fin ray 2 namespace: uberon synonym: "pelvic fin lepidotrichium 2" EXACT [] xref: ZFA:0005555 is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001778 name: pelvic fin ray 3 namespace: uberon synonym: "pelvic fin lepidotrichium 3" EXACT [] xref: ZFA:0005557 is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001779 name: pelvic fin ray 4 namespace: uberon synonym: "pelvic fin lepidotrichium 4" EXACT [] xref: ZFA:0005556 is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001780 name: pelvic fin ray 5 namespace: uberon synonym: "pelvic fin lepidotrichium 5" EXACT [] is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001781 name: pelvic fin ray 6 namespace: uberon synonym: "pelvic fin lepidotrichium 6" EXACT [] is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001782 name: pelvic fin ray 7 namespace: uberon synonym: "pelvic fin lepidotrichium 7" EXACT [] is_a: UBERON:4300117 ! pelvic fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001787 name: pectoral fin spine namespace: uberon def: "Pectoral-fin lepidotrichium 1 with mostly co-ossified and unsegmented hemitrichia that form a stiff and usually thick shaft and enlarged basal processes that moveably articulate with the pectoral girdle. The pectoral fin spine may also result from the fusion of several lepidotrichia that form a stiff shaft." [TAO:GA_TG, TAO:wd] synonym: "pectoral spine" EXACT [TAO:0001787] is_a: UBERON:4000175 ! pectoral fin lepidotrichium is_a: UBERON:4500009 ! paired fin spine property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001788 name: pelvic splint namespace: uberon def: "Dermal bone that is located near the lateral margin of the pelvic fin, and lateral to pelvic-fin lepidotrichium 1." [TAO:wd] is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:0010742 ! bone of pelvic complex relationship: part_of UBERON:0010711 ! pelvic fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001852 name: postcleithrum 1 namespace: uberon def: "Postcleithrum that anteriorly articulates with the supracleithrum and/or the cleithrum of the pectoral girdle; most dorsal element in a series of postcleithra." [TAO:GA_TG, TAO:wd] is_a: UBERON:2000410 ! postcleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001853 name: postcleithrum 2 namespace: uberon def: "Postcleithrum that articulates dorsally with postcleithrum 1, ventrally with postcleithrum 3, and anteriorly with cleithrum." [TAO:GA_TG, TAO:wd] is_a: UBERON:2000410 ! postcleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001854 name: postcleithrum 3 namespace: uberon def: "Postcleithrum that articulates dorsally with postcleithrum 2 and, sometimes, anteriorly with cleithrum." [TAO:GA_TG, TAO:wd] is_a: UBERON:2000410 ! postcleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001993 name: branched pectoral fin ray namespace: uberon def: "Pectoral fin lepidotrichium that is distally branched and segmented." [TAO:wd] synonym: "pectoral fin branched ray" EXACT [TAO:0001993] is_a: UBERON:4500007 ! pectoral fin ray property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001998 name: posttemporal-supracleithrum namespace: uberon def: "Dermal bone that results from the fusion of the dermal posttemporal and the dermal supracleithrum. Forms the upper skeletal element of the pectoral girdle between the cleithrum and neurocranium. Posttemporal-supracleithrum is paired." [TAO:wd] comment: A posttemporo-supracleithrum is a bone present in Siluriformes. There are different opinions if this is the result of an ontogenetic or a phylogenetic fusion or the loss or one or other bone. synonym: "postemporo-supracleithrum" EXACT [TAO:0001998] synonym: "posttemporal" RELATED [TAO:0001998] synonym: "posttemporo-supracleithrum" EXACT [TAO:0001998] synonym: "supracleithrum" RELATED [TAO:0001998] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2001999 name: posterior cleithral process namespace: uberon def: "Process arising from the posterior or postero-dorsal margin of the cleithrum dorsally adjacent to the insertion of the pectoral fin. Posterior cleithral process is paired." [TAO:wd] synonym: "humeral process" EXACT [TAO:0001999] synonym: "postcleithral process" EXACT [TAO:0001999] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002000 name: posterior dentation of pectoral fin spine namespace: uberon def: "Process that is tooth-like or thorn-like and arising from the posteriorly-facing margin of the abducted pectoral spine." [TAO:wd] synonym: "pectoral fin spine posterior dentation" EXACT [TAO:0002000] synonym: "posterior denticle of pectoral fin spine" EXACT [TAO:0002000] synonym: "posterior serration of pectoral fin spine" EXACT [TAO:0002000] synonym: "posterior thorn of pectoral fin spine" EXACT [TAO:0002000] synonym: "posterior tooth of pectoral fin spine" EXACT [TAO:0002000] relationship: part_of UBERON:2001787 ! pectoral fin spine property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002001 name: anterior dentation of pectoral fin spine namespace: uberon def: "Process that is tooth- or thorn-like and arising from the anteriorly-facing margin of the abducted pectoral spine. Anterior dentation of pectoral fin spine is usually present on the proximal and/or middle section of the pectoral fin spine." [TAO:wd] synonym: "anterior denticle of pectoral fin spine" RELATED [TAO:0002001] synonym: "anterior serration of pectoral fin spine" RELATED [TAO:0002001] synonym: "anterior thorn of pectoral fin spine" RELATED [TAO:0002001] synonym: "anterior tooth of pectoral fin spine" RELATED [TAO:0002001] synonym: "pectoral fin spine anterior dentation" RELATED [TAO:0002001] relationship: part_of UBERON:2001787 ! pectoral fin spine property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002002 name: anterior distal serration of pectoral fin spine namespace: uberon def: "Process that is retrorse, thorn-like and arising from the anteriorly-facing margin of the abducted pectoral spine. Anterior distal serration of pectoral fin spine is usually present on the distal section of the pectoral fin spine." [TAO:wd] synonym: "anterior denticle of pectoral fin spine" RELATED [TAO:0002002] synonym: "anterior serration of pectoral fin spine" RELATED [TAO:0002002] synonym: "anterior thorn of pectoral fin spine" RELATED [TAO:0002002] synonym: "anterior tooth of pectoral fin spine" RELATED [TAO:0002002] synonym: "pectoral fin spine anterior distal serration" RELATED [TAO:0002002] relationship: part_of UBERON:2001787 ! pectoral fin spine property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002019 name: pterotic-posttemporal-supracleithrum namespace: uberon def: "Bone that is a fusion of the pterotic, posttemporal, and supracleithrum bones." [TAO:wd] synonym: "pterotic-supracleithrum" EXACT [TAO:0002019] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002026 name: pectoral fin proximal radial bone 1 namespace: uberon def: "Pectoral fin proximal radial 1 element that is composed of bone tissue." [OBOL:automatic] synonym: "first pectoral basal radial" EXACT [TAO:0002026] is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:2102026 ! pectoral fin proximal radial element 1 [Term] id: UBERON:2002027 name: pectoral fin proximal radial bone 2 namespace: uberon def: "Pectoral fin proximal radial 2 element that is composed of bone tissue." [OBOL:automatic] synonym: "second pectoral basal radial" EXACT [TAO:0002027] is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:2102027 ! pectoral fin proximal radial element 2 [Term] id: UBERON:2002028 name: pectoral fin proximal radial bone 3 namespace: uberon def: "Pectoral fin proximal radial 3 element that is composed of bone tissue." [OBOL:automatic] synonym: "third pectoral basal radial" EXACT [TAO:0002028] is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:2102028 ! pectoral fin proximal radial element 3 [Term] id: UBERON:2002029 name: pectoral fin proximal radial bone 4 namespace: uberon def: "Pectoral fin proximal radial 4 element that is composed of bone tissue." [OBOL:automatic] synonym: "fourth pectoral basal radial" EXACT [TAO:0002029] is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:2102029 ! pectoral fin proximal radial element 4 [Term] id: UBERON:2002030 name: ventral keel of coracoid namespace: uberon def: "Process on the ventral surface of the horizontal limb of the coracoid, close to and parallel to the coracoid-cleithrum joint. Ventral keel of coracoid is paired." [TAO:wd] relationship: part_of UBERON:0004743 ! coracoid bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002040 name: inter-coracoid joint namespace: uberon def: "Joint between the right and left coracoid bones of the pectoral girdle." [TAO:wd] xref: ZFA:0005470 relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002069 name: distal cartilage of posterior process of basipterygium namespace: uberon def: "Process that is cartilaginous and arises from the distal margin or tip of posterior process of basipterygium and projects posteriorly." [TAO:wd] relationship: part_of UBERON:2001539 ! basipterygium cartilage relationship: part_of UBERON:2001734 ! posterior process of basipterygium property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002070 name: internal anterior process of basipterygium namespace: uberon def: "Process that is bony and arises from anteromedial corner of basipterygium and projects anteriorly or anteromedially." [TAO:wd] synonym: "internal anterior arm of basipterygium" EXACT [TAO:0002070] synonym: "internal arm of the basipterygium" EXACT [TAO:0002070] synonym: "mesial anterior arm of basipterygium" EXACT [TAO:0002070] synonym: "mesial anterior process of basipterygium" EXACT [TAO:0002070] relationship: part_of UBERON:2000623 ! basipterygium bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002071 name: distal cartilage of internal anterior process of basipterygium namespace: uberon def: "Process that is cartilaginous and arises from the distal tip of internal anterior process of basipterygium." [TAO:wd] relationship: part_of UBERON:2000623 ! basipterygium bone relationship: part_of UBERON:2001539 ! basipterygium cartilage property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002072 name: middle anterior process of basipterygium namespace: uberon def: "Process that is bony and arises from anterior margin of basipterygium between internal anterior process of basipterygium and external anterior process of basipterygium. Middle anterior process of basipterygium projects anteriorly or anteromedially." [TAO:wd] synonym: "middle anterior arm of basipterygium" EXACT [TAO:0002072] relationship: part_of UBERON:2000623 ! basipterygium bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002073 name: distal cartilage of middle anterior process of basipterygium namespace: uberon def: "Process that is cartilaginous and arises from the distal tip of middle anterior process of basipterygium." [TAO:wd] relationship: part_of UBERON:2000623 ! basipterygium bone relationship: part_of UBERON:2001539 ! basipterygium cartilage property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002074 name: external anterior process of basipterygium namespace: uberon def: "Process that is bony and arises from anterolateral corner of basipterygium and projects anteriorly or anteromedially." [TAO:wd] synonym: "external anterior arm of basipterygium" EXACT [TAO:0002074] synonym: "external arm of basipterygium" EXACT [TAO:0002074] synonym: "lateral anterior process of basipterygium" EXACT [TAO:0002074] synonym: "lateral pelvic process" EXACT [http://hdl.handle.net/10088/11710] relationship: part_of UBERON:2000623 ! basipterygium bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002075 name: distal cartilage of external anterior process of basipterygium namespace: uberon def: "Process that is cartilaginous and arises from the distal tip of external anterior process of basipterygium." [TAO:wd] relationship: part_of UBERON:2000623 ! basipterygium bone relationship: part_of UBERON:2001539 ! basipterygium cartilage property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002076 name: lateral process of basipterygium namespace: uberon def: "Process that is bony and arises from lateral margin of basipterygium lateral to pelvic fin lepidotrichium 1 and projects laterally or anterolaterally." [TAO:wd] synonym: "posterolateral process of basipterygium" EXACT [TAO:0002076] relationship: part_of UBERON:2000623 ! basipterygium bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002077 name: lateropterygium namespace: uberon def: "Bone that is attached or adjacent to lateral margin of basipterygium and anterior to pelvic fin lepidotrichium 1. The lateropterygium is a paired bone." [TAO:wd] comment: The lateropterygium is present only in a few teleostean subgroups, e.g., some siluriforms. is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:0010742 ! bone of pelvic complex relationship: part_of UBERON:0010711 ! pelvic fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002086 name: pelvic axillary process namespace: uberon def: "Anatomical cluster consisting of only a bony element or a combination of a bony element and one or more scales, or only modified scales, which lies in a fin fold at the base of the uppermost ray." [TAO:GA_TG] is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:0010742 ! bone of pelvic complex relationship: part_of UBERON:0010711 ! pelvic fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002087 name: pectoral axillary process namespace: uberon def: "Pectoral axillary process is an elongate structure formed by one or more additional postcleithra or modified scales or a combination of both, that is firmly attached to a skin fold above the articular condyle of the uppermost pectoral fin ray or lepidotrichium 1." [TAO:GA_TG, TAO:wd] comment: For additional information see Arratia (1997). is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:0010741 ! bone of pectoral complex relationship: part_of UBERON:0010710 ! pectoral fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002270 name: pelvic fin spine namespace: uberon synonym: "pelvic spine" EXACT [TAO:0002270] is_a: UBERON:4000173 ! pelvic fin lepidotrichium is_a: UBERON:4500009 ! paired fin spine property_value: UBPROP:0000004 "This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/tao.owl"} [Term] id: UBERON:2002277 name: pectoral fin distal radial bone 1 namespace: uberon def: "Pectoral fin distal radial 1 element that is composed of bone tissue." [OBOL:automatic] is_a: UBERON:2001588 ! pectoral fin distal radial bone is_a: UBERON:2102277 ! pectoral fin distal radial element 1 [Term] id: UBERON:2002279 name: pectoral fin distal radial bone 2 namespace: uberon def: "Pectoral fin distal radial 2 element that is composed of bone tissue." [OBOL:automatic] is_a: UBERON:2001588 ! pectoral fin distal radial bone is_a: UBERON:2102279 ! pectoral fin distal radial element 2 [Term] id: UBERON:2002280 name: pectoral fin distal radial bone 3 namespace: uberon def: "Pectoral fin distal radial 3 element that is composed of bone tissue." [OBOL:automatic] is_a: UBERON:2001588 ! pectoral fin distal radial bone is_a: UBERON:2102280 ! pectoral fin distal radial element 3 [Term] id: UBERON:2100508 name: pelvic fin radial element namespace: uberon def: "Pelvic fin radial elements are internal skeletal supports of the pelvic fin." [TAO:wd] synonym: "pelvic actinost" RELATED [TAO:0000508] synonym: "pelvic radial" RELATED [TAO:0000508] is_a: UBERON:1600006 ! paired fin radial element relationship: part_of UBERON:0010711 ! pelvic fin skeleton relationship: part_of UBERON:4440010 ! pelvic fin radial skeleton [Term] id: UBERON:2100623 name: basipterygium element namespace: uberon def: "Endochondral element that is paired and supports the pelvic fin. The basipterygium has a posteromedial process called the ischiac process (Wietzman 1962)." [TAO:wd] synonym: "basipterygia" RELATED OMO:0003004 [TAO:0000623] synonym: "basipterygium" RELATED [] synonym: "basiptrygium ischiatique" RELATED [PSPUB:0000145] synonym: "os pelvien" RELATED [PSPUB:0000164] synonym: "pelvic bone" RELATED [TAO:0000623] synonym: "pelvic plate" RELATED [] synonym: "pubic plate" RELATED [] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:2101415 name: pelvic fin distal radial element 2 namespace: uberon is_a: UBERON:1600008 ! pelvic fin distal radial element [Term] id: UBERON:2101416 name: pelvic fin distal radial element 3 namespace: uberon is_a: UBERON:1600008 ! pelvic fin distal radial element [Term] id: UBERON:2101417 name: pelvic fin distal radial element 1 namespace: uberon is_a: UBERON:1600008 ! pelvic fin distal radial element [Term] id: UBERON:2101586 name: pectoral fin radial element namespace: uberon def: "Pectoral fin radial elements are the internal skeletal supports of the pectoral fin which develop from the pectoral fin endoskeletal disc, supports the pectoral lepidotrichia or fin rays and connects the lepidotrichia with the primary pectoral girdle." [TAO:GA_TG] comment: There are two paired series of pectoral radial elements, the proximal and the distal ones that may have variable shapes and sizes. synonym: "pectoral actinost" RELATED [TAO:0001586] is_a: UBERON:1600006 ! paired fin radial element relationship: part_of UBERON:4440009 ! pectoral fin radial skeleton [Term] id: UBERON:2101587 name: pectoral fin proximal radial element namespace: uberon def: "Pectoral fin radial element which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radial elements with the primary pectoral girdle (scapula and coracoid)." [TAO:GA_TG] comment: Two to four flat or slightly rod-like proximal pectoral radial elements, bilaterally, can be found in teleosts. Pectoral proximal radial elements are commonly hour-glass or rectangular shaped. The presence of four pectoral proximal radial elements is interpreted as a synapomorphy of teleosts (Patterson 1977, Arratia 1999). is_a: UBERON:2101586 ! pectoral fin radial element [Term] id: UBERON:2101588 name: pectoral fin distal radial element namespace: uberon def: "Pectoral fin radial element that sometimes ossifies, develops from the pectoral fin endoskeletal disc, and is located at the proximal region of a lepidotrichium, between its hemitrichia. Pectoral fin distal radial element is paired." [TAO:GA_TG] comment: A variable number of pectoral distal radial elements may be present in each pectoral fin. They are commonly small elements, rod-like, round or square shaped. is_a: UBERON:2101586 ! pectoral fin radial element [Term] id: UBERON:2102026 name: pectoral fin proximal radial element 1 namespace: uberon def: "Pectoral fin proximal radial element that is the most anterior or dorsal pectoral fin radial element." [TAO:GA_TG, TAO:wd] synonym: "first pectoral basal radial" RELATED [TAO:0002026] synonym: "pectoral actinost 1" RELATED [] is_a: UBERON:2101587 ! pectoral fin proximal radial element [Term] id: UBERON:2102027 name: pectoral fin proximal radial element 2 namespace: uberon def: "Pectoral fin proximal radial element that is the second most anterior or dorsal pectoral fin radial element." [TAO:GA_TG, TAO:wd] synonym: "pectoral actinost 2" RELATED [] synonym: "second pectoral basal radial" RELATED [TAO:0002027] is_a: UBERON:2101587 ! pectoral fin proximal radial element [Term] id: UBERON:2102028 name: pectoral fin proximal radial element 3 namespace: uberon def: "Pectoral fin proximal radial element that is the third most anterior or dorsal pectoral fin radial element." [TAO:GA_TG, TAO:wd] synonym: "pectoral actinost 3" RELATED [] synonym: "third pectoral basal radial" RELATED [TAO:0002028] is_a: UBERON:2101587 ! pectoral fin proximal radial element [Term] id: UBERON:2102029 name: pectoral fin proximal radial element 4 namespace: uberon def: "Pectoral fin proximal radial element that is the fourth most anterior or dorsal pectoral fin radial element." [TAO:GA_TG, TAO:wd] synonym: "fourth pectoral basal radial" RELATED [TAO:0002029] synonym: "pectoral actinost 4" RELATED [] is_a: UBERON:2101587 ! pectoral fin proximal radial element [Term] id: UBERON:2102277 name: pectoral fin distal radial element 1 namespace: uberon is_a: UBERON:2101588 ! pectoral fin distal radial element [Term] id: UBERON:2102279 name: pectoral fin distal radial element 2 namespace: uberon is_a: UBERON:2101588 ! pectoral fin distal radial element [Term] id: UBERON:2102280 name: pectoral fin distal radial element 3 namespace: uberon is_a: UBERON:2101588 ! pectoral fin distal radial element [Term] id: UBERON:2201415 name: pelvic fin distal radial cartilage 2 namespace: uberon def: "Pelvic fin distal radial 2 element that is composed of cartilage tissue." [OBOL:automatic] is_a: UBERON:1700006 ! paired fin radial cartilage is_a: UBERON:2101415 ! pelvic fin distal radial element 2 [Term] id: UBERON:2201416 name: pelvic fin distal radial cartilage 3 namespace: uberon def: "Pelvic fin distal radial 3 element that is composed of cartilage tissue." [OBOL:automatic] is_a: UBERON:1700006 ! paired fin radial cartilage is_a: UBERON:2101416 ! pelvic fin distal radial element 3 [Term] id: UBERON:2201417 name: pelvic fin distal radial cartilage 1 namespace: uberon def: "Pelvic fin distal radial 1 element that is composed of cartilage tissue." [OBOL:automatic] is_a: UBERON:1700006 ! paired fin radial cartilage is_a: UBERON:2101417 ! pelvic fin distal radial element 1 [Term] id: UBERON:2201586 name: pectoral fin radial cartilage namespace: uberon def: "Pectoral fin radial element that is composed of cartilage tissue." [OBOL:automatic] comment: There are two paired series of pectoral radials, the proximal and the distal ones that may have variable shapes and sizes. is_a: UBERON:1700006 ! paired fin radial cartilage is_a: UBERON:2101586 ! pectoral fin radial element [Term] id: UBERON:2201587 name: pectoral fin proximal radial cartilage namespace: uberon def: "Pectoral fin proximal radial element that is composed of cartilage tissue." [OBOL:automatic] comment: Two to four flat or slightly rod-like proximal pectoral radials, bilaterally, can be found in teleosts. Pectoral proximal radials are commonly hour-glass or rectangular shaped. The presence of four pectoral proximal radials is interpreted as a synapomorphy of teleosts (Patterson 1977, Arratia 1999). is_a: UBERON:2101587 ! pectoral fin proximal radial element is_a: UBERON:2201586 ! pectoral fin radial cartilage [Term] id: UBERON:2201588 name: pectoral fin distal radial cartilage namespace: uberon def: "Pectoral fin distal radial element that is composed of cartilage tissue." [OBOL:automatic] comment: A variable number of pectoral distal radials may be present in each pectoral fin. They are commonly small elements, rod-like, round or square shaped. is_a: UBERON:2101588 ! pectoral fin distal radial element is_a: UBERON:2201586 ! pectoral fin radial cartilage [Term] id: UBERON:2202026 name: pectoral fin proximal radial cartilage 1 namespace: uberon def: "Pectoral fin proximal radial 1 element that is composed of cartilage tissue." [OBOL:automatic] synonym: "first pectoral basal radial cartilage" EXACT [TAO:0002026] is_a: UBERON:2102026 ! pectoral fin proximal radial element 1 is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage [Term] id: UBERON:2202027 name: pectoral fin proximal radial cartilage 2 namespace: uberon def: "Pectoral fin proximal radial 2 element that is composed of cartilage tissue." [OBOL:automatic] synonym: "second pectoral basal radial cartilage" EXACT [TAO:0002027] is_a: UBERON:2102027 ! pectoral fin proximal radial element 2 is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage [Term] id: UBERON:2202028 name: pectoral fin proximal radial cartilage 3 namespace: uberon def: "Pectoral fin proximal radial 3 element that is composed of cartilage tissue." [OBOL:automatic] synonym: "third pectoral basal radial cartilage" EXACT [TAO:0002028] is_a: UBERON:2102028 ! pectoral fin proximal radial element 3 is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage [Term] id: UBERON:2202029 name: pectoral fin proximal radial cartilage 4 namespace: uberon def: "Pectoral fin proximal radial 4 element that is composed of cartilage tissue." [OBOL:automatic] synonym: "fourth pectoral basal radial cartilage" EXACT [TAO:0002029] is_a: UBERON:2102029 ! pectoral fin proximal radial element 4 is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage [Term] id: UBERON:2202277 name: pectoral fin distal radial cartilage 1 namespace: uberon def: "Pectoral fin distal radial 1 element that is composed of cartilage tissue." [OBOL:automatic] is_a: UBERON:2102277 ! pectoral fin distal radial element 1 is_a: UBERON:2201588 ! pectoral fin distal radial cartilage [Term] id: UBERON:2202279 name: pectoral fin distal radial cartilage 2 namespace: uberon def: "Pectoral fin distal radial 2 element that is composed of cartilage tissue." [OBOL:automatic] is_a: UBERON:2102279 ! pectoral fin distal radial element 2 is_a: UBERON:2201588 ! pectoral fin distal radial cartilage [Term] id: UBERON:2202280 name: pectoral fin distal radial cartilage 3 namespace: uberon def: "Pectoral fin distal radial 3 element that is composed of cartilage tissue." [OBOL:automatic] is_a: UBERON:2102280 ! pectoral fin distal radial element 3 is_a: UBERON:2201588 ! pectoral fin distal radial cartilage [Term] id: UBERON:3000748 name: suprascapula namespace: uberon def: "Paired, cartilaginous elements located in the dorsolateral shoulder region. Each suprascapula is a flat broad blade that extends medially." [AAO:LAP] synonym: "adscapulum" RELATED [UBERON:3000748] synonym: "episcapulum" RELATED [UBERON:3000748] synonym: "omolita" RELATED [UBERON:3000748] synonym: "scapula major" RELATED [UBERON:3000748] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000752 name: pars acromialis namespace: uberon def: "Prominent structure (anteromedial head) that forms the anterior section of the ventral margin of the scapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000753 name: pars glenoidalis of scapula namespace: uberon def: "Concave structure (posteromedial head) that forms the posterior head of the ventral margin of the scapula. The pars glenoidalis articulates with the humerus, and comprises the dorsal portion of the glenoid fossa." [AAO:LAP] synonym: "glenoid head of scapula" EXACT [] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000755 name: pectoral girdle opening namespace: uberon relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000756 name: crista dorsalis humeri namespace: uberon def: "Small hooked process on the dorsal aspect of the humeral shaft; it does not extend on to the glenoid head. The m subscapularis is inserted on it." [AAO:LAP] synonym: "crista dorsalis" RELATED [UBERON:3000756] relationship: part_of UBERON:0000976 ! humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000757 name: zonal area namespace: uberon def: "All those parts of the pectoral girdle ventral and medial to the glenoid fossa." [AAO:LAP] relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000759 name: omosternum namespace: uberon def: "Proximal portion of the prezonal element of the pectoral girdle. It may be a flat, midventral cartilaginous structure or a calcified or bony element elaborated into a stylum." [AAO:LAP] synonym: "episternum" RELATED [UBERON:3000759] synonym: "interclavicle" RELATED [UBERON:3000759] synonym: "prezonal element" RELATED [UBERON:3000759] synonym: "prezonal sternum" RELATED [UBERON:3000759] synonym: "sternum superior" RELATED [UBERON:3000759] is_a: UBERON:3000936 ! zonal element relationship: part_of UBERON:3000937 ! prezonal element property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000762 name: epicoracoid namespace: uberon def: "Paired, flat cartilaginous arches that compose the central portion of the zonal area, unites the clavicle and coracoid of each half of the pectoral girdle, and form the medial margins of the pectoral fenestrae." [AAO:LAP] synonym: "coracoid cartilage" RELATED [UBERON:3000762] synonym: "corpus sterni" RELATED [UBERON:3000762] synonym: "entosternal" RELATED [UBERON:3000762] synonym: "infracoracoid" RELATED [UBERON:3000762] synonym: "sterni ossa media" RELATED [UBERON:3000762] is_a: UBERON:3000936 ! zonal element relationship: part_of UBERON:3000757 ! zonal area property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000763 name: epicoracoid bridge namespace: uberon def: "A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project anteriorly. They articulate anteriorly with the omosternum." [AAO:LAP] synonym: "procoracoid bridge" RELATED [UBERON:3000763] relationship: part_of UBERON:3000762 ! epicoracoid property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000767 name: pelvic girdle opening namespace: uberon is_a: UBERON:0007832 ! pelvic girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000771 name: acetabular depression namespace: uberon def: "The central, most concave portion of the acetabulum, which remains open." [AAO:LAP] is_a: UBERON:3000767 ! pelvic girdle opening property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000773 name: ilial ridge namespace: uberon def: "Longitudinal crest on the dorsal side of the shaft of the ilium." [AAO:LAP] synonym: "ala ossis ilei" RELATED [UBERON:3000773] relationship: part_of UBERON:3000774 ! ilial shaft property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000774 name: ilial shaft namespace: uberon def: "Anterior rod that articulates with the sacrum." [AAO:LAP] relationship: part_of UBERON:0001273 ! ilium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000776 name: glenoid foramen namespace: uberon def: "Opening on the glenoid fossa." [AAO:LAP] is_a: UBERON:3000755 ! pectoral girdle opening property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000777 name: epicoracoid horn namespace: uberon def: "A pair of cartilaginous expansions (one from each epicoracoid cartilage) that project posteriorly. They articulate with the sternum by means of grooves, pouches or fossae in the dorsal surface of the sternum and provide a site for the insertion of a pair of muscles derived from the m. rectus abdominis." [AAO:LAP] relationship: part_of UBERON:3000762 ! epicoracoid property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000778 name: supracoracoid foramen namespace: uberon def: "Opening on the scapulocoracoid bone through which passes the n. supracoracoideus and the corresponding artery and vein." [AAO:LAP] synonym: "foramen supracoracoideum" RELATED [UBERON:3000778] is_a: UBERON:3000755 ! pectoral girdle opening property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000779 name: pectoral fenestra namespace: uberon def: "Ovoid space on the pectoral girdle limited anteriorly by the procoracoid, medially by the epicoracoid, and posteriorly by the coracoid." [AAO:LAP] synonym: "fenestra between procoracoid and coracoid" RELATED [UBERON:3000779] is_a: UBERON:3000755 ! pectoral girdle opening property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000780 name: incisura coracoidea namespace: uberon def: "Notch that separates the cartilaginous regions of the procoracoid and coracoid." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000783 name: fovea capitis of humerus namespace: uberon def: "Ovoid roughened pit, which is situated a little below and behind the center of the head, and serves as a site of attachment for ligaments." [AAO:LAP] comment: Not to be confused with the fovea capitis of the femur is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0006801 ! proximal head of humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000784 name: ulnar condyle namespace: uberon def: "Semi-elliptical ball located at the lower end of the humerus, adjacent to the humeral ball." [AAO:LAP] synonym: "medial condyle" RELATED [UBERON:3000784] relationship: part_of UBERON:0000976 ! humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000785 name: trochlear groove of humerus namespace: uberon def: "Furrow between the humeral head and the ulnar condyle." [AAO:LAP] synonym: "trochlear sulcus of humerus" EXACT [] relationship: part_of UBERON:0000976 ! humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000786 name: fossa cubitalis ventralis namespace: uberon def: "Depresion on the distal end of the humerus, just anterior to the humeral head, in which the end of the radius fits when the forelimb is flexed." [AAO:LAP] relationship: part_of UBERON:0000976 ! humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000787 name: collum antibrachii namespace: uberon def: "In a fused radio-ulna, the proximal portion of the compound bone (where the sulcus longitudinalis is barely evident or absent) is a cylindrical pillar." [AAO:LAP] relationship: part_of UBERON:0006715 ! radio-ulna relationship: part_of UBERON:0010703 ! forelimb zeugopod skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000792 name: anterior ramus of cleithrum namespace: uberon def: "Subdivision of the cleithrum that extends along the anterior edge of the suprascapula." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000799 name: cartilago paraglenoidalis namespace: uberon def: "Strip of cartilage that separates the coracoid from the scapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000811 name: glenoid end of clavicle namespace: uberon def: "Lateral end of the clavicle, which usually lies in close proximity to the pars acromialis of the scapula, and occassionally may fuse to it." [AAO:LAP] synonym: "extremitas glenoidalis" RELATED [UBERON:3000811] relationship: part_of UBERON:0001105 ! clavicle bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000813 name: sulcus pro cartilagine praecoracoidealis namespace: uberon def: "Canal on the posterior aspect of the clavicle that accomodates the anterior margin of the procoracoid cartilage." [AAO:LAP] relationship: part_of UBERON:0001105 ! clavicle bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000814 name: glenoid head of coracoid namespace: uberon def: "Lateral end of the coracoid, which forms the medial portion of the glenoid fossa." [AAO:LAP] synonym: "intumescentia glenoidalis" RELATED [UBERON:3000814] relationship: part_of UBERON:0004743 ! coracoid bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000815 name: sternal head of coracoid namespace: uberon def: "Medial end of the coracoid, which is synchondrotically fused to the epicoracoid cartilage." [AAO:LAP] synonym: "pars epicoracoidealis" RELATED [UBERON:3000815] relationship: part_of UBERON:0004743 ! coracoid bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000816 name: margo fenestralis namespace: uberon def: "Anterior margin of the coracoid, which forms the posterior edge of the pectoral fenestra." [AAO:LAP] relationship: part_of UBERON:0004743 ! coracoid bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000817 name: margo posterior namespace: uberon def: "Posterior margin of the coracoid." [AAO:LAP] relationship: part_of UBERON:0004743 ! coracoid bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000818 name: margo anterior of scapula namespace: uberon def: "Anterior margin of the scapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000819 name: margo clavicularis namespace: uberon def: "Inferior margin of the pars acromialis of the scapula, which articulates with the clavicule." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000820 name: margo posterior of scapula namespace: uberon def: "Posterior margin of the scapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000821 name: margo suprascapularis namespace: uberon def: "Superior margin of the scapula, which articulates with the suprascapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000822 name: pars suprascapularis namespace: uberon def: "Superior portion of the scapula, which is thinner than the rest of the shaft." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000823 name: sinus interglenoidalis namespace: uberon def: "Notch or indentation between the pars glenoidalis and pars acromialis of the scapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000824 name: tenuitas cristaeformis namespace: uberon def: "Leading (anterior) portion of the scapula, which is thinner than the rest of the shaft." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000825 name: crista longitudinalis scapula namespace: uberon def: "Longitudinal ridge on the medial (inner) face of the scapula." [AAO:LAP] relationship: part_of UBERON:0006849 ! scapula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000827 name: margo anterior of cleithrum namespace: uberon def: "Anterior margin of the anterior ramus of the cleithrum." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000828 name: margo posterior of cleithrum namespace: uberon def: "Posterior margin of the posterior ramus of the cleithrum." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000829 name: margo scapularis namespace: uberon def: "Lateral margin of the suprascapula, which articulates with the scapula." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000830 name: margo vertebralis namespace: uberon def: "Medial margin of the suprascapula, which lies dorsal to the vertebral column." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000831 name: spina acromioidea namespace: uberon def: "Small process of the lamina recurvata that extends laterally toward the scapular-suprascapular articulation." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000832 name: anterior lamina recurvata namespace: uberon def: "Portion of the anterior ramus of the cleithrum that invest the anterior margin of the suprascapula, extending onto its dorsal surface." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000833 name: sinus dorsalis namespace: uberon def: "Notch or indentation between the anterior and posterior rami of the cleithrum." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000834 name: posterior lamina recurvata namespace: uberon def: "Portion of the posterior ramus of the cleithrum that invests the posterior margin of the suprascapula, extending onto its dorsal surface." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000836 name: crista lateralis humeri namespace: uberon def: "Ridge on the lateral aspect of the humeral shaft located just anterior to the radial (lateral) epicondyle." [AAO:LAP] relationship: part_of UBERON:0000976 ! humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000837 name: crista medialis humeri namespace: uberon def: "Ridge on the medial aspect of the humeral shaft that extends from the level of the middle portion of the shaft to ulnar (medial) epicondyle." [AAO:LAP] relationship: part_of UBERON:0000976 ! humerus property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000839 name: crista radii namespace: uberon def: "Small ridge on the lateral aspect of the radial shaft, located at the level of the collum antibrachii." [AAO:LAP] relationship: part_of UBERON:0001423 ! radius bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000840 name: capitulum of radius namespace: uberon def: "Lateral portion of the proximal (upper) articular surface of the radius that consists of an eminence with a rounded apex." [AAO:LAP] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001423 ! radius bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000842 name: capitulum ulnae namespace: uberon def: "Small eminence on the distal articular head of the ulna." [AAO:LAP] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001424 ! ulna property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000844 name: sulcus longitudinalis namespace: uberon def: "In a fused radio-ulna, longitudinal furrow that demarcates the area of fusion of both elements. This sulcus is deep in the distal portion of the compound bone, but barely evident or absent at the proximal end." [AAO:LAP] relationship: part_of UBERON:0006715 ! radio-ulna property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000846 name: element Y of fore mesopodium namespace: uberon def: "Oval carpal element that is located on the anteromedial side of the radiale and the anterolateral side of the ulnare. Anteriorly, it articulates with carpals 1 through 4 (or 2 through 5 according to some authors). It is also recognized as centrale by some authors. This element originates from one, two, or three condensation centers. Occasionally it may fuse to carpal 2(1), carpal 3(2), the ulnare, or other elements." [AAO:LAP] relationship: part_of UBERON:0009880 ! carpal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000856 name: intercalary element of fore digit namespace: uberon def: "Small elements present in all digits of the manus, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally." [AAO:LAP] is_a: UBERON:0004249 ! manual digit bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000859 name: foramen perforans carpi namespace: uberon def: "Opening for the passage of the perforans carpi artery from the ventral to the dorsal side. It perforates the compound ulnare + intermedium." [AAO:LAP] relationship: part_of UBERON:3000856 ! intercalary element of fore digit property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000862 name: pubo-ischium namespace: uberon def: "Composite element formed by the fusion of the ischium and pubis." [AAO:LAP] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000865 name: epileon namespace: uberon def: "Dorsal extremity of the ilial shaft, which remains cartilaginous." [AAO:LAP] relationship: part_of UBERON:3000774 ! ilial shaft property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000866 name: agger limitans anterior of ilium namespace: uberon def: "Shelf-like expansion of the ilial corpus that forms the anterior border of the acetabulum." [AAO:LAP] relationship: part_of UBERON:0006802 ! acetabular rim property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000867 name: agger limitans anterior of ischium namespace: uberon def: "Shelf-like expansion of the ischium that forms the posterior border of the acetabulum." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000869 name: ilial protuberance namespace: uberon def: "Small, dorsolaterally projecting knob located just anterior to the supra-acetabular expansion and about the level of the anterior border of the acetabulum." [AAO:LAP] synonym: "dorsal protuberance" RELATED [UBERON:3000869] synonym: "tuber superior" RELATED [UBERON:3000869] relationship: part_of UBERON:3000774 ! ilial shaft property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000870 name: preacetabular expansion namespace: uberon def: "Ventral portion of the ilial corpus, located anteroventral to the acetabulum." [AAO:LAP] synonym: "pars descendens ilei" RELATED [UBERON:3000870] synonym: "ventral acetabular expansion" RELATED [UBERON:3000870] relationship: part_of UBERON:0010747 ! body of ilium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000871 name: fossula tuberis superioris namespace: uberon def: "Small depression dorsal to the proximal portion of the collum ilei and ventral to the ilial protuberance." [AAO:LAP] relationship: part_of UBERON:0010747 ! body of ilium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000872 name: collum ilei namespace: uberon def: "Cyllindrical pillar that originates anterior to the acetabulum and extends to the ilial shaft." [AAO:LAP] relationship: part_of UBERON:0010747 ! body of ilium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000873 name: pars cylindriformis ilei namespace: uberon def: "Elongate, cylindrical structure on the ventral side of the shaft of the ilium that extends through its entire length." [AAO:LAP] relationship: part_of UBERON:3000774 ! ilial shaft property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000874 name: crista ischii namespace: uberon def: "Crest on the posterior side of the ischium, which may also extend to the posteroventral aspect of pubis." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000875 name: spina pelvis posterior namespace: uberon def: "Small, rounded process on the anterodorsal margin of the ischium, just posterior to the area of articulation with the ilium." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000876 name: spina pelvis anterior namespace: uberon def: "Small, rounded process on the anteroventral margin of the preacetabular expansion of the ilial corpus." [AAO:LAP] relationship: part_of UBERON:0010747 ! body of ilium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000877 name: intumescentia bilateralis inferior namespace: uberon def: "Small protuberance on the ischium, located close to its posteroventral margin." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000878 name: intumescentia bilateralis superior namespace: uberon def: "Small protuberance on the ischium, located at the level of the superior margin of the acetabulum and close to its posterior margin." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000879 name: incisura terminalis namespace: uberon def: "Small indentation on the posterior margin of the ischium, ventral to the intumescentia bilateralis superior." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000880 name: crista hypertrophica ischium namespace: uberon def: "Large protuberance on the dorsal aspect of the ischium that extends from the ischio-ilium articulation to the spina pelvis posterior." [AAO:LAP] relationship: part_of UBERON:0001274 ! ischium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000882 name: interilial region namespace: uberon def: "Area of convergence of the ilial shafts. When the preacetabular ilium is narrow, the interilial configuration is V-shaped or narrowly rounded, whereas when the interilial region is broadly expanded the interilial configuration is U-shaped." [AAO:LAP] relationship: part_of UBERON:0001273 ! ilium property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000883 name: recessus coccygealis namespace: uberon def: "Area dorsal to the pelvic girdle symphysis, between the dorsal portions of the ilial corpora, where lies the posterior terminus of the urostyle." [AAO:LAP] relationship: part_of UBERON:3000774 ! ilial shaft property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000884 name: epipubis namespace: uberon def: "Small prepubic element formed by a plate of cartilage (which may calcify in the adult) that is synchondrotically united with the pubis." [AAO:LAP] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000886 name: ypsiloid cartilage namespace: uberon def: "Y-shaped cartilage lying in the middle line, anterior to the pubo-ischium with which it articulates. It lies dorsal to the rectus abdominis muscle with which it articulates." [AAO:LAP] synonym: "abdominal sternum" RELATED [UBERON:3000886] synonym: "cartilago epipubes" RELATED [UBERON:3000886] synonym: "cartilago marsupial" RELATED [UBERON:3000886] synonym: "cartilago ypsiloidea" RELATED [UBERON:3000886] synonym: "cartilago ypsiloides" RELATED [UBERON:3000886] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000894 name: femoral ridge namespace: uberon def: "Low crest that arises just behind the acetabular head and extends distally for about one-third the length of the femoral shaft." [AAO:LAP] synonym: "crista femoris" RELATED [UBERON:3000894] relationship: part_of UBERON:0000981 ! femur property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000896 name: foveal depression namespace: uberon def: "Ovoid roughened pit situated on the dorsal and anteroventral surface of the acetabular head wherein the ligaments attaching the bone to the acetabulum are inserted." [AAO:LAP] relationship: part_of UBERON:0006767 ! head of femur property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000898 name: trochanteric crest namespace: uberon def: "Paired ridges on the ventral surface of the femoral shaft that run toward the femoral trochanter; the posterior crest is less developed." [AAO:LAP] relationship: part_of UBERON:0000981 ! femur property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000903 name: tibial crest namespace: uberon def: "Ridge that arises from the dorso-masial side of the extensor surface of the tibia. It receives the insertion of the tendon of the extensor ilio-tibialis muscle." [AAO:LAP] relationship: part_of UBERON:0000979 ! tibia property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000904 name: apophysis distalis of tibiofibula namespace: uberon def: "Swelling on the extensor surface of the distal head of the tibiofibula." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000905 name: caput ossis cruris namespace: uberon def: "Proximal head of the tibiofibula that articulates with the distal head of the femur." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000906 name: sulcus pro musculo extensori cruris brevis namespace: uberon def: "Small canal on the proximal head of to the tibiofibula, lateral to the apophysis distalis, for the insertion of the cruris brevis muscle." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000907 name: eminentia arcuata namespace: uberon def: "Small crest on the extensor surface of the proximal head of the tibiofibula (tibial side)." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000908 name: sulcus distalis ossis cruris namespace: uberon def: "In a fused tibiofibula, longitudinal furrow in the distal portion of the compound bone that demarcates the area of fusion of both elements." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000909 name: sulcus proximalis ossis cruris namespace: uberon def: "In a fused tibiofibula, longitudinal furrow in the proximal portion of the compound bone that demarcates the area of fusion of both elements." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000911 name: foramen nutritium exterius namespace: uberon def: "Foramen for the tibial artery and vein and the deep peroneal nerve; it pierces through the midpoint of the shaft of the tibiofibula." [AAO:LAP] relationship: part_of UBERON:0006714 ! tibiofibula property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000916 name: apophysis proximalis namespace: uberon def: "Swelling on the extensor surface of the proximal compound head of the tibiale and fibulare." [AAO:LAP] relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000917 name: apophysis distalis of tibiale fibulare namespace: uberon def: "Swelling on the extensor surface of the distal compound head of the tibiale and fibulare." [AAO:LAP] relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000921 name: element Y of hind mesopodium namespace: uberon def: "Oval tarsal element that is located on the anteromedial side of the tibiale. Anteriorly, it articulates with the proximal prehallux, tarsals 1, 2, and 3." [AAO:LAP] is_a: UBERON:0015050 ! tarsus endochondral element relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000922 name: prehallux skeleton namespace: uberon def: "One to three or four elements located ventral and medial to the metatarsal of digit I. When more than one elements are present, they are smaller than the proximal prehallux." [AAO:LAP] synonym: "prehallux" BROAD [] is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). It was modified by cjm in the following way: the class was relabeled from 'prepollex' to 'prepollex skeleton', to distinguish it from the digit-like structure which it is a part of. It was re-classified from bone to subdivision of skeleton, as it may in fact be composed of multiple individual bones. TODO: definition needs reviewed, and it still requires placement under the UBERON:0012136 ! prehallux" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000931 name: intercalary element of hind digit namespace: uberon def: "Small elements present in all digits of the pes, when present in a taxon. Each intercalary element articulates with the anteroventral end of the penultimate phalanx proximally and the distal phalanx distally." [AAO:LAP] is_a: UBERON:0004248 ! pedal digit bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000934 name: foramen perforans tarsi namespace: uberon def: "Small opening between the centrale and fibulare that allows the perforans tarsi artery to pass from the ventral to the dorsal side of the ankle." [AAO:LAP] relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000936 name: zonal element namespace: uberon def: "All those parts of the pectoral girdle in the central region of the zonal area." [AAO:LAP] relationship: part_of UBERON:3000757 ! zonal area property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000937 name: prezonal element namespace: uberon def: "All those parts of the pectoral girdle that lie anterior to the zonal area." [AAO:LAP] relationship: part_of UBERON:3000757 ! zonal area property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000938 name: postzonal element namespace: uberon def: "All those parts of the pectoral girdle that lies posterior to the zonal area." [AAO:LAP] relationship: part_of UBERON:3000757 ! zonal area property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000941 name: arciferal girdle namespace: uberon def: "Pectoral girdle in which the epicoracoid cartilages are elaborated into posteriorly directed epicoracoid horns. Most arciferal pectoral girdles are characterized by fusion of the epicoracoid cartilages in the interclavicle region. Posterior to the clavicles, the epicoracoids usually are free and overlapping." [AAO:LAP] is_a: UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000942 name: firmisternal girdle namespace: uberon def: "Pectoral girdle that lacks epicoracoid horns. The sternum is fused to the pectoral arch, and the epicoracoid cartilages of each half of the girdle are fused to one another. The midzonal length of the girdle is shorter than that of an arciferal girdle, but pre- and postzonal elements tend to be longer." [AAO:LAP] is_a: UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000943 name: pseudofirmisternal girdle namespace: uberon def: "Modified arciferal pectoral girdle in which the fusion of the epicoracoid cartilages in the interclavicle region is extended posteriorly. Thus, the cartilages no longer overlap freely, and functionally a partially firmisternal condition is created." [AAO:LAP] is_a: UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000944 name: pseudoarciferal girdle namespace: uberon def: "Modified firmisternal pectoral girdle in which the epicoracoid cartilages are partly free and overlapping; however, the epicoracoids are fused to one another and the sternum postermodially." [AAO:LAP] is_a: UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000945 name: inscriptional rib namespace: uberon def: "Three pairs of cartilaginous elements posterior to the sternum that lie in the myosepta of the ventral trunk musculature." [AAO:LAP] synonym: "abdominal ribs" RELATED [UBERON:3000945] relationship: part_of UBERON:3000938 ! postzonal element property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000949 name: posterior ramus of cleithrum namespace: uberon def: "Laminar subdivision of the cleithrum that extends along the ventral (lateral) midbody of the suprascapula." [AAO:LAP] relationship: part_of UBERON:0004741 ! cleithrum property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3000965 name: basale commune (carpal) namespace: uberon def: "Amalgamation of distal carpals 1 and 2." [AAO:EJS] is_a: UBERON:0001481 ! distal carpal bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3001002 name: basale commune (tarsal) namespace: uberon def: "Amalgamation of distal tarsals 1 and 2." [AAO:EJS] is_a: UBERON:0010721 ! distal tarsal bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010045 name: centrale 1 namespace: uberon def: "Distal-most centrale when two are present." [AAO:EJS] is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0012131 ! centrale relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010060 name: centrale (fore) namespace: uberon def: "Rectangular cartilage or bone between the distal basal commune and the proximal intermedium." [AAO:EJS] is_a: UBERON:0001435 ! carpal bone is_a: UBERON:0012131 ! centrale relationship: part_of UBERON:0009880 ! carpal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010069 name: intermedium (fore) namespace: uberon def: "Quadrangular cartilage or bone lying between the preaxial radiale and the postaxial ulnare in the proximal level of the mesopodium." [AAO:EJS] relationship: part_of UBERON:0009880 ! carpal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010073 name: centrale 2 namespace: uberon def: "The proximal-most rectangular cartilage or bone when two centralelia are present." [AAO:EJS] is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0012131 ! centrale relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010194 name: mediale namespace: uberon def: "A recurrent variant of salamanders; a rhomboidal cartilage lying immediately postaxial from the centrale or centrale 1." [AAO:EJS] relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010205 name: postminimus namespace: uberon def: "A rounded cartilage lying in the postaxial margin of the mesopodium, adjacent to the distal end of the fibulare." [AAO:EJS] comment: Often consider atavistic when present in extant salamnders (Caudata) relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010240 name: Nobelian rod namespace: uberon def: "Either of a pair of cartilaginous rods that support the intromittent organ of male Ascaphus, and are attached to the posteroventral part of the pelvic girdle." [AAO:EJS, http://orcid.org/0000-0002-6601-2165, http://purl.obolibrary.org/obo/uberon/tracker/200] synonym: "Nobelian bone" RELATED [] synonym: "Nobelian element" RELATED [] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010262 name: capitulum of radio-ulna namespace: uberon relationship: part_of UBERON:0006715 ! radio-ulna property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010624 name: subarticular sesamoid namespace: uberon alt_id: UBERON:3010674 def: "Is an endochondral structure located on the ventral to the junction between, in the hand, the metacarpal and most proximal phalanx of the digit and between phalanges, and in the foot between the metatarsal and most proximal phalanx of the digit and between phalanges. Typically subarticular sesamoids are found with the subarticular tubercles." [PHENOSCAPE] comment: to edit more later synonym: "subarticular sesamoids" RELATED [] is_a: UBERON:0011141 ! appendicular ossicle is_a: UBERON:0012357 ! digitopodium bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010675 name: bony nodule of terminal phalanx of hind digit namespace: uberon def: "Endochondral element distal to terminal phalanx of hind digit." [AAO:EJS] synonym: "bony nodule" BROAD [] is_a: UBERON:0004248 ! pedal digit bone property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010682 name: proximal-most prepollical element namespace: uberon def: "Is the proximal-most prepollical element." [PHENOSCAPE] is_a: UBERON:4200140 ! prepollical element relationship: part_of UBERON:0012135 ! prepollex skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010683 name: distal-most prepollical element namespace: uberon def: "Is the distal-most prepollical element." [PHENOSCAPE] is_a: UBERON:4200140 ! prepollical element relationship: part_of UBERON:0012135 ! prepollex skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010684 name: proximal-most prehallical element namespace: uberon is_a: UBERON:4200141 ! prehallical element relationship: part_of UBERON:3000922 ! prehallux skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010685 name: distal-most prehallical element namespace: uberon is_a: UBERON:4200141 ! prehallical element relationship: part_of UBERON:3000922 ! prehallux skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010719 name: dilated medial process of metacarpal IV namespace: uberon relationship: part_of UBERON:0003648 ! metacarpal bone of digit 4 property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:3010746 name: T-shaped terminal phalanx namespace: uberon is_a: UBERON:0004300 ! distal phalanx property_value: UBPROP:0000004 "This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/aao.owl"} [Term] id: UBERON:4000160 name: anocleithrum namespace: uberon def: "Dermal bone of pectoral girdle that is dorsal to and articulates with the cleithrum." [VSAO:curator] comment: In sarcopterygians; analogous in position to postcleithrum in actinopterygians. synonym: "anocleithra" EXACT OMO:0003004 [VSAO:0000160] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/vsao.owl"} [Term] id: UBERON:4000171 name: scapular complex namespace: uberon def: "Skeletal subdivision of dermal bones that may include the anterolateral plate (AL), the spinal process (Sp), and anteroventral plate (AV) and other dermal bones that are part of the pectoral girdle." [VSAO:curator] comment: A scapular complex is described in placoderms (Goujet and Young, 1995). synonym: "pectoral complex" BROAD [ISBN:3-89937-052-X] is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/vsao.owl"} [Term] id: UBERON:4000173 name: pelvic fin lepidotrichium namespace: uberon def: "Lepidotrichium that is part of the pelvic fin skeleton." [TAO:curator] synonym: "pelvic fin lepidotrichia" EXACT OMO:0003004 [VSAO:0000173] synonym: "pelvic fin ray" NARROW [VSAO:0000173] xref: ZFA:0001552 is_a: UBERON:0010742 ! bone of pelvic complex is_a: UBERON:4440011 ! paired fin lepidotrichium relationship: part_of UBERON:0010711 ! pelvic fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/vsao.owl"} [Term] id: UBERON:4000175 name: pectoral fin lepidotrichium namespace: uberon def: "Lepidotrichium that is part of the pectoral fin skeleton." [TAO:curator] comment: Each pectoral lepidotrichium may be unsegmented (e.g., spine), segmented but unbranched (e.g., leading ray) or segmented and branched. Definition of lepidotrichium by Schultze and Arratia (1989: 217). For additional information about lepidotrichia see Arratia et al. 2001 and Arratia 2008. synonym: "pectoral fin lepidotrichia" EXACT OMO:0003004 [VSAO:0000175] synonym: "pectoral fin ray" NARROW [VSAO:0000175] xref: ZFA:0001551 is_a: UBERON:0010741 ! bone of pectoral complex is_a: UBERON:4440011 ! paired fin lepidotrichium relationship: part_of UBERON:0010710 ! pectoral fin skeleton property_value: UBPROP:0000004 "This class was sourced from an external ontology (vertebrate_skeletal_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon" xsd:string {source="http://purl.obolibrary.org/obo/vsao.owl"} [Term] id: UBERON:4100004 name: ischial peduncle namespace: uberon def: "Bony projection (peduncle) that is located on the posterior portion of the ilium, posterior to the acetabulum." [PHENOSCAPE] relationship: part_of UBERON:0001274 ! ischium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100005 name: second phalanx namespace: uberon def: "Second most proximal phalanx in manual or pedal digits." [PHENOSCAPE] comment: Consider merging with 'intermediate phalanx' is_a: UBERON:0003221 ! phalanx [Term] id: UBERON:4100006 name: parasternal process namespace: uberon def: "Posterior projection of the interclavicle that extends betwen and sometimes beyond the clavicles." [PHENOSCAPE:AD] synonym: "posterior stalk of intercalvicle" EXACT [] synonym: "posterior stem of interclavicle" EXACT [] is_a: UBERON:0011655 ! interclavicle property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100007 name: pectoral articular facet namespace: uberon def: "Facet of scapulocoracoid with which the pectoral fin radial(s) articulates. Facet of scapulocoracoid with which the pectoral fin radial(s) articulates. Based on Goujet and Young (1995)." [PHENOSCAPE:pm] comment: Should be part of some joint. relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100009 name: pedal digit 7 phalanx namespace: uberon def: "Phalanx of the 7th pedal digit." [PHENOSCAPE:AD] is_a: UBERON:0001449 ! phalanx of pes property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100010 name: post-glenoid process namespace: uberon def: "Distinct notch ventral to the glenoid." [PHENOSCAPE:NI] comment: Fix def'n relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100011 name: postacetabular buttress namespace: uberon def: "A bony process at the distal margin of the acetabulum formed by the ischium and/or the ischial peduncle of the ilium." [PHENOSCAPE:AD] relationship: part_of UBERON:0001269 ! acetabular part of hip bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100012 name: postacetabular zone namespace: uberon def: "Region of the ilium posterior and dorsal to the acetabulum." [PHENOSCAPE:AD] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100016 name: posterior process of ilium namespace: uberon def: "A posteriorly directed bony projection from the ilium that is the attachment site of the iliofibularis muscle (see Sumida, 1997)." [PHENOSCAPE:AD] synonym: "posterior iliac process" RELATED [] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100112 name: radial facet namespace: uberon def: "Facet to accommodate the radius on the distal end of the humerus." [PHENOSCAPE:NI] is_a: UBERON:4200214 ! epipodial facet relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100114 name: anterior distal condyle of femur namespace: uberon def: "Anatomical projection in the distal region of the femur." [PHENOSCAPE:NI] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4100116 name: posterior distal condyle of femur namespace: uberon def: "Anatomical projection in the posterior/distal region of the femur." [PHENOSCAPE:NI] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4200000 name: medial blade of ilium namespace: uberon def: "The medial surface of the iliac blade. Origin site of the iliofemoralis internus muscle and its homologues." [PHENOSCAPE:ad] relationship: part_of UBERON:0010746 ! iliac blade property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200001 name: postpubis namespace: uberon def: "The region of the pubis posterior to the acetabulum." [PHENOSCAPE] comment: In some non-avian reptile this terminology refers to a distinct rear facing process of the pubis. In avians and some closely related theropod taxa this term is used to denote the pubis itself which has been rotated to face backwards. relationship: part_of UBERON:0001275 ! pubis property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200002 name: coracoid plate namespace: uberon def: "Broad, convex expansion of the coracoid bone below the level of the glenoid. Based on Romer 1956." [PHENOSCAPE] relationship: part_of UBERON:0004743 ! coracoid bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200004 name: intertrochanteric fossa namespace: uberon def: "Depression on the ventreal side of the femoral head. Associated with the pubioischiofemoralis externus muscle." [PHENOSCAPE] relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200006 name: infraglenoid buttress namespace: uberon def: "An anatomical projection ventral to the glenoid fossa on the scapulocoracoid that abuts on the cliethrum (if present)." [PHENOSCAPE] comment: Can exist in taxa without a cleithrum. relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200007 name: transverse pelvic ridge namespace: uberon def: "The transverse pelvic ridge is a short crest directly anterior to, and not extending posterior to, the prominent supra-acetabular buttress from Pawley and Warren 2006." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium [Term] id: UBERON:4200008 name: inter-clavicle joint namespace: uberon def: "Joint that articulates left and right clavicles." [PHENOSCAPE] synonym: "interclavicle joint" EXACT [] xref: PHENOSCAPE:wd relationship: part_of UBERON:0001105 ! clavicle bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200010 name: ventral humeral ridge namespace: uberon def: "A distinct bony ridge on ventralsurface of the humeral shaft that corresponds to the attachment site of the pectoralis muscle." [PHENOSCAPE] synonym: "pectoral process" RELATED [] xref: PHENOSCAPE:ad relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200011 name: pedal centrale namespace: uberon def: "A centrale found in the pes." [PHENOSCAPE] synonym: "navicular bone of pes" BROAD [] xref: PHENOSCAPE:AD is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0012131 ! centrale property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200012 name: ectepicondylar flange namespace: uberon def: "Flange present of the distal region of the humerus, associated with extensor musculature of forelimb." [PHENOSCAPE] xref: PHENOSCAPE:ni relationship: part_of UBERON:0000976 ! humerus relationship: part_of UBERON:0006807 ! ectepicondyle of humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200013 name: flexor surface namespace: uberon def: "Surface of a long bone that possess the flexor muscle attachment sites." [PHENOSCAPE] xref: PHENOSCAPE:ni relationship: part_of UBERON:0002495 ! long bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200014 name: lateral tuber of ulna namespace: uberon def: "Projection on the lateral side of proximal part of the ulna." [PHENOSCAPE:NI] relationship: part_of UBERON:0001424 ! ulna property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200016 name: postbranchial lamina namespace: uberon def: "Medial facing projection or surface on the anterior ( cranial) region of the cleithrum that is often textured or denticled. This process has two primary functions: 1) its shape enhances the vertical strength of the cleithrum and 2) it forms the edge of the gill chamber and helps to direct water after it has passed over the gills (modified from Clack 2012)." [PHENOSCAPE] relationship: part_of UBERON:0004741 ! cleithrum property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200018 name: calcaneal tuber namespace: uberon def: "An enlargement of the distal region of the calcaneum that corresponds to the attachment site for the foot extensor muscles." [PHENOSCAPE] xref: PHENOSCAPE:ad relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200019 name: preacetabular process namespace: uberon def: "Process on ilium located anteriorly to acetabulum." [PHENOSCAPE] xref: PHENOSCAPE:ad relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200020 name: suprascapular fossa namespace: uberon def: "Fossa on the medial surface on the scapula above the glenoid." [PHENOSCAPE] xref: PHENOSCAPE:ad relationship: part_of UBERON:0006849 ! scapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200021 name: astragalus-calcaneum unit namespace: uberon def: "Osteological unit consisting of the astragalus and calcaneum." [PHENOSCAPE] xref: PHENOSCAPE:NI relationship: part_of UBERON:0009879 ! tarsal skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-5839-6798 [Term] id: UBERON:4200022 name: extracleithrum namespace: uberon def: "Narrow bone that lies ventral to the level of insertion of the pectoral fin and is sutured to the posterior edges of both the clavicle and cleithrum. Based on Forey 1998." [PHENOSCAPE] comment: The presence of this bone is a synapomorphy of coelacanth fishes. is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200025 name: ascending process of the astragalus namespace: uberon def: "Flattened process of the dorsl surface of the astragalus which contacts the tibia anteriorly." [PHENOSCAPE:NI] xref: PHENOSCAPE:NI relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200026 name: supraglenoid foramen namespace: uberon def: "Foramen that perforates supraglenoid buttress." [PHENOSCAPE] relationship: part_of UBERON:4200027 ! supraglenoid buttress property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200027 name: supraglenoid buttress namespace: uberon def: "A bony projection dorsal to the glenoid articulation on the scapulocoracoid." [PHENOSCAPE] comment: In basal tetrapodomorphs this structure braces the scapula on the cleithrum, but this function is lost in derived tetrapods. relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200028 name: adductor blade namespace: uberon def: "A prominent ridge in basal tetrapods on the ventral side of the femur that includes the fourth trochater, internal trochanter and the adductor crest (based on Coates, 1996)." [PHENOSCAPE:AD] relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200029 name: adductor crest namespace: uberon def: "A bony crest on venteral side of femur that is the attachment site for the adductor muscles." [PHENOSCAPE:AD] relationship: part_of UBERON:0000981 ! femur relationship: part_of UBERON:4200028 ! adductor blade property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200030 name: antitrochanter namespace: uberon def: "Raised surface at the posterior portion of the acetabulum (see Nesbitt, 2011)." [PHENOSCAPE:NI] relationship: part_of UBERON:0001269 ! acetabular part of hip bone relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200032 name: clavicle blade namespace: uberon def: "Expanded and flattened ventral region of clavicle bone." [PHENOSCAPE] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0001105 ! clavicle bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200033 name: cleithrum head namespace: uberon def: "Expanded dorsal region of the cleithrum." [PHENOSCAPE] relationship: part_of UBERON:0004741 ! cleithrum property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200034 name: cnemial crest namespace: uberon def: "Longitudnal bony ridge on tibia, attachment site of the major extensor muscle of the hind limb." [PHENOSCAPE] relationship: part_of UBERON:0000979 ! tibia property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200036 name: internal trochanter namespace: uberon def: "A boney projection on the internal diaphysis of the femur anterior or medial to the intertrochanteric fossa, below the femoral head. Muscle attachment site for ventral muscle mass notably the puboischiofemoralis externus. Modified from Romer 1956." [PHENOSCAPE] relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200037 name: supinator process namespace: uberon def: "A bony process that corresponds to the attachment site for the forelimb supinator muscles in tetrapods, distal to the deltopectoral crest and anterior to the radial condyle." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200038 name: subscapular fossa namespace: uberon def: "A marked depression on the medial side of the scapula blade, often opposite the glenoid region." [PHENOSCAPE] relationship: part_of UBERON:0006849 ! scapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200039 name: supraacetabular buttress namespace: uberon def: "A bony protuberance dorsal to the acetabulum on the ilium, confluent with the supraacetabular crest (when present). Acts as a bone brace to prevent excessive femoral abduction and the origin site for part of the M. iliofemoralis." [PHENOSCAPE] synonym: "acetabular buttress" BROAD [] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200040 name: acrocoracoid process namespace: uberon def: "Anatomical process located in the proximal region of the coracoid in avian theropods, that is hook-shaped." [PHENOSCAPE:NI] relationship: part_of UBERON:0004743 ! coracoid bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200042 name: brevis shelf namespace: uberon def: "Anatomical projection on the ilium, anchoring caudal muscles." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200043 name: brevis fossa namespace: uberon def: "Fossa located on the brevis shelf." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium relationship: part_of UBERON:4200042 ! brevis shelf property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200044 name: articular surface for the calcaneum on the astragalus namespace: uberon def: "Contact surface between the calcaneum and the astragalus located on the astragalus." [PHENOSCAPE] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200045 name: articular surface for the astragalus on the calcaneum namespace: uberon def: "Contact surface between the calcaneum and the astragalus located on the calcaneum." [PHENOSCAPE] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200046 name: astragalo-calcaneal canal namespace: uberon def: "The astragalo-calcaneal canal forms a foramen between the articulated astragalus and calcaneum when the canal is ossified (Nesbitt, 2011)." [PHENOSCAPE] relationship: part_of UBERON:4200021 ! astragalus-calcaneum unit property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200048 name: bicipital crest namespace: uberon def: "Anatomical projection that is an expansion on the proximal region of the humerus." [PHENOSCAPE] comment: Origin of the aponeursis of humeral head of the M. biceps brachii. From Bamuel et al. 1993 synonym: "crista bicipitalis" EXACT [] synonym: "crista tuberculi majoris" EXACT [] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200051 name: cotyloid notch namespace: uberon def: "A notch or opening in the ventral part of the acetabular rim." [PHENOSCAPE] relationship: part_of UBERON:0006802 ! acetabular rim property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200052 name: crista tibiofibularis namespace: uberon def: "Tuberosity on the posterior surface of the lateral femoral condyle." [PHENOSCAPE] relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200060 name: ectepicondylar foramen namespace: uberon def: "Formen present on the ectepicondyle of the humerus." [PHENOSCAPE] relationship: part_of UBERON:0006807 ! ectepicondyle of humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200063 name: ectocondylar tubercle namespace: uberon def: "Posteriorly projecting bony tubercle that is located proximal to the lateral condyle of the femur." [PHENOSCAPE] relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200076 name: trunk armor pectoral fenestra namespace: uberon def: "An opening in the dermal armour of basal gnathostomes that encloses the pectoral fins. (modified from Young 2010)." [PHENOSCAPE] comment: Disjoint from 'pectoral fenestra' of Amphibians (AAO_0000779). synonym: "trunk armour pectoral fenestra" EXACT [] is_a: UBERON:3000755 ! pectoral girdle opening property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200078 name: clavicular facet namespace: uberon def: "A notch for the articulation of the clavicle on other girdle elements." [PHENOSCAPE] relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200079 name: dorsal iliac process namespace: uberon def: "Posteriordorsal process of the ilium." [PHENOSCAPE] comment: It spresences gives the ilium a 'double headed' appearence. relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200080 name: fibular crest namespace: uberon def: "A bony projection on the lateral side of the tibia, allowing contact between the later and the fibula." [PHENOSCAPE] relationship: part_of UBERON:0001446 ! fibula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200081 name: hypocleideum namespace: uberon def: "Zone of bone organ located on the flat ventral side of the distal region of the furcula, serving as attachment region for pectoral muscles." [PHENOSCAPE] relationship: part_of UBERON:0007841 ! furcula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200083 name: postaxial centrale namespace: uberon def: "Centrale in the postaxial region of the mesopodium." [PHENOSCAPE] comment: The paried limbs have a main axis running proximodistally trough the stylopodiam element (humerus/femur). from the zeugopodium distally elements can be divided into preaxial (on the radius/tibia side) and postaxial (ulna/fibula) sides. The exact orientation of these axises vary depending on the orientation of the limb in a neutral position. is_a: UBERON:0012131 ! centrale property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200084 name: preaxial centrale namespace: uberon def: "Centrale in the preaxial side of the mesopodium." [PHENOSCAPE] comment: The paried limbs have a main axis running proximodistally trough the stylopodiam element (humerus/femur). from the zeugopodium distally elements can be divided into preaxial (on the radius/tibia side) and postaxial (ulna/fibula) sides. The exact orientation of these axises vary depending on the orientation of the limb in a neutral position. is_a: UBERON:0012131 ! centrale property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200086 name: iliac neck namespace: uberon def: "A constricted region of the ilium which is dorsal to the acetabulular region. Prior to the expansion of the iliac blade." [PHENOSCAPE] synonym: "neck of ilium" EXACT [] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200087 name: iliac peduncle namespace: uberon def: "Bony projection that is part of the dorsal surface of the ischim, where it articulates with the ilium." [PHENOSCAPE] relationship: part_of UBERON:0001274 ! ischium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200088 name: iliac peduncle of the pubis namespace: uberon def: "Bony projection that is part of the dorsal surface of the pubis where it meets the ilium." [PHENOSCAPE] relationship: part_of UBERON:0001275 ! pubis property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200089 name: fibular facet of the calcaneum namespace: uberon def: "Articular surface on calcaneum for the fibula." [PHENOSCAPE] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200090 name: fibular facet of the astragalus namespace: uberon def: "Articular surface on the astragalus for the fibula." [PHENOSCAPE] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200095 name: infraspinous process namespace: uberon def: "Process on infraspinous (region below the spine) of scapula." [PHENOSCAPE] relationship: part_of UBERON:0006849 ! scapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200096 name: intercondylar fossa namespace: uberon def: "The deep fossa between the femoral condyles in which the cruciate ligaments are attached. From Medilexicon.com." [PHENOSCAPE] synonym: "femoral groove" EXACT [] synonym: "femoral sulcus" EXACT [] synonym: "femoropatellar groove" EXACT [] synonym: "patellar groove" EXACT [] synonym: "patellar sulcus" EXACT [] synonym: "patellar surface of femur" EXACT [] synonym: "patellofemoral groove" EXACT [] synonym: "trochlea of femur" EXACT [] synonym: "trochlear groove of femur" EXACT [] synonym: "trochlear sulcus of femur" EXACT [] synonym: "trochlear surface of femur" EXACT [] relationship: part_of UBERON:0004406 ! distal epiphysis of femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200098 name: ischial foot namespace: uberon def: "Expansion of the distal region of the ischium." [PHENOSCAPE] relationship: part_of UBERON:0001274 ! ischium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200099 name: lateral extrascapular namespace: uberon def: "The most lateral of the paired series of extrascapular bones and is the bone where the intersection of the otic, postotic and extrascapular or supratemporal canals occur." [PHENOSCAPE] is_a: UBERON:2000663 ! extrascapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200100 name: latissimus dorsi process namespace: uberon def: "A bony process on the dorsal side of the proximal region of the humerus which corresponds to the insertion site of the Latissimus dorsi muscle." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200102 name: median dorsal plate namespace: uberon def: "Dermal armour plate that is situated behind the head and constitute the dorsal most portion of the dermal shoulder girdle. Modified from Brazeau 2009, Young 2010." [PHENOSCAPE] comment: Present in some basal gnathostomes. is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200103 name: median extrascapular namespace: uberon def: "The medial of the the paired series of extrascapular bones which carries the extrascapular or supratemporal canal." [PHENOSCAPE] is_a: UBERON:2000663 ! extrascapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200104 name: metacarpal extensor pit namespace: uberon def: "Pits located on the proximodorsal part of metacarpals denoting the attachemnt sites for ligaments." [PHENOSCAPE] relationship: part_of UBERON:0002374 ! metacarpal bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200107 name: obturator process of ischium namespace: uberon def: "Process located on the ventral shaft of the ischium that denotes the attachment site of the pubio-ischio-femoralis externus." [PHENOSCAPE] comment: In birds the pubio-ischio-femoralis externus is sometimes called the M.oburatorius lateralis and medialis. relationship: part_of UBERON:0001274 ! ischium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200112 name: prepectoral space namespace: uberon def: "A triangular, anteroventrally facing area developed between the preaxial margin of the humerus and the proximal limb of the ventral humeral ridge. Based on Callier et al. 2009 ." [PHENOSCAPE] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200114 name: prepubic process namespace: uberon def: "Elongate process forming the anteriormost part of the pubis." [PHENOSCAPE] relationship: part_of UBERON:0001275 ! pubis property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200115 name: presupracleithrum namespace: uberon def: "An skeletal element of the upper pectoral girdle overlapped by the opercular and posttemporal bones." [PHENOSCAPE] is_a: UBERON:0007829 ! pectoral girdle bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200116 name: pteroid namespace: uberon def: "Slender bone connected to the carpus in pterosaurs. The bone, which may have pointed forward, supports the propatagium, a membrane located between the carpus and pectoral region." [PHENOSCAPE] comment: This structure is unique to pterosaurs. There is debate wherther this structure is derived from metacarpal I, the carpal bones or is a a novel bone. See Unwin et al. 1996 is_a: UBERON:0008962 ! forelimb bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200117 name: pubic boot namespace: uberon def: "Anteroposterior expansion of the distal region of the pubis." [PHENOSCAPE] relationship: part_of UBERON:0001275 ! pubis property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200118 name: pubic peduncle namespace: uberon def: "Bony projection on the anterior portion of the ilium, anterior to the acetabulum that articulates with the pubis." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200119 name: pubis-ischium contact namespace: uberon def: "Contact zone between the pubis and the ischium." [PHENOSCAPE] relationship: part_of UBERON:0007830 ! pelvic girdle bone/zone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200120 name: puboischiadic plate namespace: uberon def: "A broad expnase of bone incorperating both the pubis and the ischium. Origin site for ventral limb muscle including the pubioishciofemoralis externus. Modified from Romer 1956 ." [PHENOSCAPE] relationship: part_of UBERON:0007830 ! pelvic girdle bone/zone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200123 name: scapular process namespace: uberon def: "The dorsal extension of the scapulocoracoid above the level of the glenoid region in basal gnathostomes. Modified from Brazeau 2009." [PHENOSCAPE] relationship: part_of UBERON:0006849 ! scapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200125 name: supraacetabular crest namespace: uberon def: "Anatomical projection (crest) located dorsaly to the acetabulum." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200126 name: supraacetabular rim namespace: uberon def: "Bony rim that is part of the supraacetabular region." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200127 name: suprascapula foramen namespace: uberon def: "The route through which structures pass between the base of the neck and the posterior scapular region. It is formed by the suprascapular notch of the scapula and the superior transverse scapular ligament. From http://medical-dictionary.thefreedictionary.com/suprascapular+foramen." [PHENOSCAPE] relationship: part_of UBERON:0006849 ! scapula property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200130 name: tibial facet of astragalus namespace: uberon def: "Facet for the articulation of the tibia on the astragalus (talus)." [PHENOSCAPE] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200131 name: trochanteric shelf namespace: uberon def: "Anatomical projection on the anterolateral region of the proximal end of the femur." [PHENOSCAPE] comment: In Archosaurs was originally a possible insertion site for the m. iliofemoralis externus (Hutchinson 2001). In more derived dinosaurs this becomes a distinct process possibly providing the attachment surface for mm. iliotrochanteri in addition to m. iliofemoralis externus (Carrano and Hutchinson 2002) relationship: part_of UBERON:0000981 ! femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200135 name: puboischiadic bar namespace: uberon def: "A transverse flattened or cylindrical plate in the posterior body wall opposite the anterior ends of the pelvic fins, in front of the vent and at the posterior end of the body cavity, that supports a few anterior pelvic radials and a basal cartilage, the basipterygium. from Leonard J. V. Compagno. 2001. Sharks of the World: An Annotated and Illustrated Catalogue of Shark Species Known to Date. Volume 2." [PHENOSCAPE] comment: Potentially homologous to the pelvic girdle. relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200140 name: prepollical element namespace: uberon def: "Is a endochondral element that is part of the mesopodial skeleton and is contained within the prepollex which in some taxa appears as a pre-axial digit-like projection anterior to the first digit of the hand." [PHENOSCAPE] is_a: UBERON:0015049 ! carpus endochondral element relationship: part_of UBERON:0012135 ! prepollex skeleton [Term] id: UBERON:4200141 name: prehallical element namespace: uberon def: "Is a endochondral element that is part of the mesopodial skeleton and is contained within the prehallux which in some taxa appears as a pre-axial digit-like projection anterior to the first digit of the foot." [PHENOSCAPE] is_a: UBERON:0015050 ! tarsus endochondral element relationship: part_of UBERON:3000922 ! prehallux skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-1810-9886 [Term] id: UBERON:4200150 name: accessory foramen namespace: uberon def: "Foramen found on the humerus of tetrapodomorphs beyond the entepicondyle and ectepicondyle foramen. Often denoted as foramen 'c' and 'd' after Jarvik 1996." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200152 name: intertarsale sesamoid namespace: uberon def: "Sesamoid bone in the tarsal region." [PHENOSCAPE] synonym: "os sesamoides tarsale" BROAD [] is_a: UBERON:0001447 ! tarsal bone is_a: UBERON:0008000 ! sesamoid bone of pes is_a: UBERON:0017261 ! intertarsal sesamoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200153 name: metatarsal bone of digit 6 namespace: uberon is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:4200154 ! metapodium bone 6 [Term] id: UBERON:4200154 name: metapodium bone 6 namespace: uberon is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:4200155 name: metapodium bone 7 namespace: uberon is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:4200156 name: metapodium bone 8 namespace: uberon is_a: UBERON:0003821 ! metapodium bone [Term] id: UBERON:4200157 name: metatarsal bone of digit 7 namespace: uberon is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:4200155 ! metapodium bone 7 [Term] id: UBERON:4200158 name: metatarsal bone of digit 8 namespace: uberon is_a: UBERON:0001448 ! metatarsal bone is_a: UBERON:4200156 ! metapodium bone 8 [Term] id: UBERON:4200159 name: ventral ridge system namespace: uberon def: "A collection of attached ridges on the ventrl surface of the femur consisting of the internal and fourth trochanters plus the adductor blade and crest. Most notible in early amniotes (based on Romer 1956)." [PHENOSCAPE] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:4200166 name: hindlimb interepipodial space namespace: uberon def: "The space between the bones of the tibia and the fibula." [PHENOSCAPE] relationship: part_of UBERON:0010720 ! hindlimb zeugopod skeleton [Term] id: UBERON:4200167 name: mesial pelvic ridge namespace: uberon relationship: part_of UBERON:0007832 ! pelvic girdle skeleton [Term] id: UBERON:4200169 name: process 2 of entepicondyle namespace: uberon def: "Process on the humerus of basal tetrapods, anterior to the entepicondyle and associated with subscapularis muscle (based on Coates 1996)." [PHENOSCAPE] synonym: "process 2" BROAD [] relationship: part_of UBERON:0000976 ! humerus property_value: seeAlso "https://github.com/obophenotype/uberon/issues/1819" xsd:string [Term] id: UBERON:4200170 name: process 3 of entepicondyle namespace: uberon def: "Process on the humerus of basal tetrapods, anterior to the entepicondyle and adjacent to process 4 of entepicondyle (see Coates 1996)." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200171 name: process 4 of entepicondyle namespace: uberon def: "Process on the humerus of basal tetrapods, anterior to the entepicondyle and adjacent to process 3 of entepicondyle (see Coates 1996)." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200172 name: neck of humerus namespace: uberon synonym: "anatomic neck of humerus" RELATED [FMA:23356] synonym: "collum anatomicum (Humerus)" EXACT [FMA:23356] synonym: "collum anatomicum humeri" EXACT OMO:0003011 [FMA:23356, FMA:TA] synonym: "humeral neck" EXACT [] xref: FMA:23356 xref: NCIT:C33164 is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0000976 ! humerus relationship: part_of UBERON:0004411 ! proximal epiphysis of humerus [Term] id: UBERON:4200173 name: dorsal ridge namespace: uberon relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200174 name: distal condyle of humerus namespace: uberon def: "The area encompassing the radial and ulnar condyles of the humerus." [PHENOSCAPE] is_a: UBERON:0009988 ! condyle of humerus [Term] id: UBERON:4200175 name: supraglenoid region namespace: uberon relationship: part_of UBERON:0006849 ! scapula [Term] id: UBERON:4200176 name: ascending process of clavicle namespace: uberon def: "A bony dorsal extension of the clavicle." [PHENOSCAPE] relationship: part_of UBERON:0001105 ! clavicle bone [Term] id: UBERON:4200177 name: supracondyle tubercle namespace: uberon relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200180 name: semilunate carpal namespace: uberon def: "The moon shaped fusion of distal carpals 1 and 2 found in some theropod dinosaurs, permitting greater wrist mobility." [PHENOSCAPE] is_a: UBERON:0001435 ! carpal bone [Term] id: UBERON:4200181 name: astragalus head namespace: uberon def: "The region of the astragalus/ talus that carries the articular surface for the navicular or central metatarsal." [PHENOSCAPE] synonym: "talus head" EXACT [] relationship: part_of UBERON:0002395 ! talus [Term] id: UBERON:4200182 name: lateral tubercle of astragalus namespace: uberon relationship: part_of UBERON:0002395 ! talus [Term] id: UBERON:4200183 name: bicipital tuberosity namespace: uberon def: "The rough eminence which is on the anterior inner aspect of the neck of the radius and into which the tendon of the biceps is inserted. From http://www.merriam-webster.com/medical." [PHENOSCAPE] relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:4200184 name: ulnar tuberosity namespace: uberon def: "His roughened area of bone sits distomedially at the base of the coronoid process. It is the attachment site for the brachialis muscle. From http://www.anatomyexpert.com/." [PHENOSCAPE] relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:4200185 name: entepicondyle fossa namespace: uberon def: "A fossa on the distal humerus proximal to the entepicondyle." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200186 name: distal keel of metacarpal III namespace: uberon relationship: part_of UBERON:0003647 ! metacarpal bone of digit 3 [Term] id: UBERON:4200192 name: ulnar facet of the humerus namespace: uberon synonym: "ulnar facet" BROAD [] is_a: UBERON:4200214 ! epipodial facet relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200193 name: posterodorsal process of ilium namespace: uberon def: "Anatomical project part of the blade of the ilium that projects posteriorly." [PHENOSCAPE] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200197 name: anterior humeral ridge namespace: uberon def: "Ridge or keel at the proximal end of the humerus. (see Laurin 1998)." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0001-7972-3866 [Term] id: UBERON:4200203 name: humeral facet on the ulna namespace: uberon def: "Facet on the ulna for articulation with the ulnar condyle of the humerus." [PHENOSCAPE] relationship: part_of UBERON:0001424 ! ulna [Term] id: UBERON:4200204 name: humeral facet on radius namespace: uberon def: "Facet on the radius for articulation with the radial condyle of the humerus." [PHENOSCAPE] synonym: "proximal articular surface of radius" EXACT [] relationship: part_of UBERON:0001423 ! radius bone [Term] id: UBERON:4200206 name: internal rim of coracoid foramen namespace: uberon def: "The internal part of the rim denoting the coracoid foramen." [PHENOSCAPE] is_a: UBERON:2001737 ! coracoid foramen [Term] id: UBERON:4200207 name: external rim of the coracoid foramen namespace: uberon def: "The external wall of the rim denoting the coracoid foramen." [PHENOSCAPE] is_a: UBERON:2001737 ! coracoid foramen [Term] id: UBERON:4200208 name: pectoral fin intermediate radial bone namespace: uberon def: "Radial bone found in between the proximal and distal radial bones." [PHENOSCAPE] is_a: UBERON:2101586 ! pectoral fin radial element [Term] id: UBERON:4200209 name: postaxial process of the ulnare namespace: uberon def: "A projection on the postaxial region of the ulnare." [PHENOSCAPE] relationship: part_of UBERON:0002445 ! ulnare [Term] id: UBERON:4200210 name: postaxial process of the femur namespace: uberon def: "A projection on the postaxial region of the femur." [PHENOSCAPE] relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:4200211 name: postaxial process of the fibula namespace: uberon def: "A projection on the postaxial region of the fibula." [PHENOSCAPE] relationship: part_of UBERON:0001446 ! fibula [Term] id: UBERON:4200212 name: pectoral process of humerus namespace: uberon synonym: "pectoral process" RELATED [] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200213 name: deltoid process namespace: uberon relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200214 name: epipodial facet namespace: uberon def: "Facets for the articulation of the epipodial (zeugopodial) elements." [PHENOSCAPE] relationship: part_of UBERON:0011583 ! stylopodial skeleton [Term] id: UBERON:4200216 name: fibula facet of femur namespace: uberon def: "Facet on the femur for the fibula." [PHENOSCAPE] synonym: "fibular fossa" BROAD [] is_a: UBERON:4200214 ! epipodial facet relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:4200217 name: tibial facet of femur namespace: uberon def: "Facet on the femur for the tibia." [PHENOSCAPE] is_a: UBERON:4200214 ! epipodial facet relationship: part_of UBERON:0000981 ! femur [Term] id: UBERON:4200219 name: middle phalanx of manual digit 1 namespace: uberon is_a: UBERON:0003620 ! manual digit 1 phalanx is_a: UBERON:0003864 ! middle phalanx of manus [Term] id: UBERON:4200220 name: iliac ramus namespace: uberon is_a: UBERON:0001273 ! ilium [Term] id: UBERON:4200222 name: distal groove of humerus namespace: uberon def: "Groove along the distal margin of the humerus, ventral to the radial and ulnar condyle." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200223 name: foramen C namespace: uberon def: "Foramen located on the scapulocoracoid, located just behind the cleithral anteroventral process(the articulation with the cleithrum). Modified from Coates 1996." [PHENOSCAPE] relationship: part_of UBERON:0004753 ! scapulocoracoid [Term] id: UBERON:4200224 name: columnar area namespace: uberon def: "Modified from Garvey et al. 2005. ' Between the dorsal ridge and the caput humeri is a futher recessed area......that clearly separates the two structures and is slightly separted from the dorsal surface of the entepicondyle, and more specifically from the unfinished bone of the entepicondyle, by a narrow ridge.'." [PHENOSCAPE] relationship: part_of UBERON:0000976 ! humerus [Term] id: UBERON:4200226 name: anteroventral process of cleithrum namespace: uberon def: "A ramus of the celithrum that descend along the girdle. Its rounded outer surface forms the articulation surface for the clavicle while its anterior surface overlaps with the anterior process of the scapulocoracoid." [PHENOSCAPE] relationship: part_of UBERON:0004741 ! cleithrum [Term] id: UBERON:4200228 name: excurrent foramen of ectepicondylar foramen namespace: uberon relationship: part_of UBERON:4200060 ! ectepicondylar foramen [Term] id: UBERON:4200229 name: incurrent foramen of ectepicondylar foramen namespace: uberon relationship: part_of UBERON:4200060 ! ectepicondylar foramen [Term] id: UBERON:4200233 name: dorsal clavicular process namespace: uberon def: "A process, extending dorsally from the clavicular plate, that attaches to the cleithrum. Modified from Clack 2012 and Coates 1996." [PHENOSCAPE] synonym: "ascending dorsal clavicular process" EXACT [] relationship: part_of UBERON:0001105 ! clavicle bone [Term] id: UBERON:4300007 name: medial pelvic process namespace: uberon def: "Process that is posteriorly oriented and medially located on the basipterygium. It is a paired projection. [PHENOSCAPE:bf]." [http://hdl.handle.net/10088/11710] relationship: part_of UBERON:2000623 ! basipterygium bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300013 name: paired fin radial skeleton namespace: uberon synonym: "paired fin radial series" EXACT [] relationship: part_of UBERON:0010713 ! paired fin skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300014 name: dorsal cleithrum namespace: uberon comment: According to Forey 1988, History of the Coelacanth fish:\n\n'In placoderms there are large overlapping plates which completely encircle the body and superficially may be matched with those in osteichthyans (Stensio, 1959; Forey, 1980; Jarvik, 1980). Thus, the anterior median ventral, anteroventral and anterior lateral of placoderms lie in the same positions as the interclavicle, clavicle (ventral cleithrum) and cleithrum (dorsal cleithrum) of osteichthyans.' is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300015 name: ventral cleithrum namespace: uberon comment: According to Forey 1988, History of the Coelacanth fish:\n\n'In placoderms there are large overlapping plates which completely encircle the body and superficially may be matched with those in osteichthyans (Stensio, 1959; Forey, 1980; Jarvik, 1980). Thus, the anterior median ventral, anteroventral and anterior lateral of placoderms lie in the same positions as the interclavicle, clavicle (ventral cleithrum) and cleithrum (dorsal cleithrum) of osteichthyans.' is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300021 name: anterolateral plate namespace: uberon def: "Dermal bone that is part of the scapular complex in placoderm fishes." [ISBN:3-89937-052-X] synonym: "AL" EXACT [ISBN:3-89937-052-X] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300022 name: anteroventral plate namespace: uberon def: "Dermal bone that is part of the scapular complex in placoderms, located in the ventral armour adjacent to the interolateral (IL) and anterior ventrolateral (AVL) plates." [PHENOSCAPE] synonym: "anterior ventral plate" EXACT [] synonym: "AV" EXACT [] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300023 name: interolateral plate namespace: uberon def: "Dermal bone that is part of the scapular complex in placoderms, and located anterior to the anterior ventrolateral (AVL) plate." [ISBN:3-89937-052-X] synonym: "IL" EXACT [ISBN:3-89937-052-X] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300024 name: spinal plate namespace: uberon def: "Dermal bone that is part of the scapular complex in placoderms, and located lateral to the anterior ventrolateral (AVL) plate." [ISBN:3-89937-052-X] synonym: "Sp" EXACT [ISBN:3-89937-052-X] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300025 name: posterior dorsolateral plate namespace: uberon def: "Dermal bone that is part of the scapular complex in placoderms, located posterior to the main components of the complex." [ISBN:3-89937-052-X] synonym: "PDL" EXACT [ISBN:3-89937-052-X] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300026 name: anterior ventrolateral plate namespace: uberon def: "Dermal bone that is part of the ventral region of scapular complex in placoderms (see also posterior ventrolateral plate). In most placoderms with a long ventral armour, the ventral wall is typically composed of two large paired lateral plates (anterior and posterior ventrolaterals)." [ISBN:3-89937-052-X] synonym: "AVL" EXACT [ISBN:3-89937-052-X] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300028 name: posterior ventrolateral plate namespace: uberon def: "Dermal bone that is part of the ventral region of scapular complex in placoderms (see also anterior ventrolateral plate). In most placoderms with a long ventral armour, the ventral wall is typically composed of two large paired lateral plates (anterior and posterior ventrolaterals)." [ISBN:3-89937-052-X] synonym: "PVL" EXACT [ISBN:3-89937-052-X] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:4000171 ! scapular complex property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300081 name: mesopterygium element namespace: uberon is_a: UBERON:2101587 ! pectoral fin proximal radial element property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300082 name: metapterygium element namespace: uberon is_a: UBERON:2101587 ! pectoral fin proximal radial element property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300083 name: propterygium element namespace: uberon is_a: UBERON:2101587 ! pectoral fin proximal radial element property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300087 name: mesopterygium bone namespace: uberon is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:4300081 ! mesopterygium element [Term] id: UBERON:4300088 name: metapterygium bone namespace: uberon is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:4300082 ! metapterygium element [Term] id: UBERON:4300089 name: propterygium bone namespace: uberon is_a: UBERON:2001587 ! pectoral fin proximal radial bone is_a: UBERON:4300083 ! propterygium element [Term] id: UBERON:4300092 name: mesocoracoid element namespace: uberon relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300103 name: rudimentary pectoral fin ray namespace: uberon def: "Pectoral fin lepidtrichium that is small, unbranched and unsegmented." [PHENOSCAPE] is_a: UBERON:4500007 ! pectoral fin ray property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300104 name: ectocoracoid bone namespace: uberon def: "A paired dermal bone in Gasterosteiformes connected with the coracoid and extending posteriorly. Has also been applied to the element below the scapula and applied to the coracoid in Dipnoi. Dictionary of Ichthyology." [PHENOSCAPE] is_a: UBERON:0007829 ! pectoral girdle bone relationship: part_of UBERON:0007831 ! pectoral girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300106 name: ventral limb of posttemporal namespace: uberon def: "Zone of bone organ that is the ventral extension of the posttemporal." [PHENOSCAPE] relationship: part_of UBERON:2000549 ! posttemporal property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300117 name: pelvic fin ray namespace: uberon def: "Soft ray that is part of the pelvic fin." [PHENOSCAPE] synonym: "pelvic fin soft ray" EXACT [] is_a: UBERON:4000173 ! pelvic fin lepidotrichium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300119 name: glenoid region namespace: uberon def: "Region surrounding the glenoid fossa on the scapulocoracoid." [PHENOSCAPE:AD] relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300125 name: dorsal iliac ridge namespace: uberon def: "Ridge that is part of the ilium." [PHENOSCAPE:AD, WD] relationship: part_of UBERON:0001273 ! ilium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300151 name: pelvic intercleithral cartilage namespace: uberon def: "Cartilage element that lies between processes of the cleithrum and pelvic girdle in gobioid fishes. Posterodorsal to the ventral end of each cleithrum is a posteriorly projecting process. The pelvic intercleithral cartilage (an unpaired, median structure) forms a bridge between the processes (From Springer, 1983)." [http://www.sil.si.edu/smithsoniancontributions/Zoology/pdf_hi/SCTZ-0390.pdf] relationship: part_of UBERON:0007832 ! pelvic girdle skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300155 name: pectoral splint namespace: uberon def: "Unpaired bone that covers the base of the first pectoral ray. [Filleul and Lavoué 2001]." [PMID:11386087] is_a: UBERON:0004375 ! bone of free limb or fin is_a: UBERON:0010741 ! bone of pectoral complex relationship: part_of UBERON:0010710 ! pectoral fin skeleton property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300156 name: anterodorsal crest namespace: uberon relationship: part_of UBERON:0004753 ! scapulocoracoid property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300157 name: midshaft namespace: uberon def: "Region in the middle of the shaft of a long bone (e.g. humerus, femur etc)." [PHENOSCAPE:NI] relationship: part_of UBERON:0002495 ! long bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300158 name: ectepicondylar depression namespace: uberon relationship: part_of UBERON:0006807 ! ectepicondyle of humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300192 name: branched pelvic fin ray namespace: uberon def: "Pelvic fin lepidotrichium that is distally branched and segmented." [PHENOSCAPE] is_a: UBERON:4300117 ! pelvic fin ray property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300261 name: pectoral fin hook namespace: uberon def: "Process that is part of the pectoral fin lepidotrichium." [PHENOSCAPE] relationship: part_of UBERON:4000175 ! pectoral fin lepidotrichium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4300262 name: pelvic fin hook namespace: uberon def: "Process that is part of the pelvic fin lepidotrichium." [PHENOSCAPE] relationship: part_of UBERON:4000173 ! pelvic fin lepidotrichium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-3162-7490 [Term] id: UBERON:4400000 name: metapterygium cartilage namespace: uberon def: "The posterior and innermost of the three principal basal cartilages in the fins of fishes." [http://www.thefreedictionary.com/Metapterygium] comment: Relevant to Elasmobranchii and Holocephali. It is usually the longest basal and is exceptionally long in males where it is distally modified into a clasper. {xref="http://www.briancoad.com/dictionary/DicPics/metapterygium.htm"} is_a: UBERON:2201587 ! pectoral fin proximal radial cartilage is_a: UBERON:4300082 ! metapterygium element [Term] id: UBERON:4440009 name: pectoral fin radial skeleton namespace: uberon synonym: "pectoral fin radial series" EXACT [] is_a: UBERON:4300013 ! paired fin radial skeleton relationship: part_of UBERON:0010710 ! pectoral fin skeleton [Term] id: UBERON:4440010 name: pelvic fin radial skeleton namespace: uberon synonym: "pelvic fin radial series" EXACT [] is_a: UBERON:4300013 ! paired fin radial skeleton relationship: part_of UBERON:0010711 ! pelvic fin skeleton [Term] id: UBERON:4440011 name: paired fin lepidotrichium namespace: uberon def: "Lepidotrichium that is part of a paired fin." [PHENOSCAPE] is_a: UBERON:0004375 ! bone of free limb or fin relationship: part_of UBERON:0010713 ! paired fin skeleton [Term] id: UBERON:4500007 name: pectoral fin ray namespace: uberon def: "Soft ray that is part of the pectoral fin." [PHENOSCAPE] synonym: "pectoral fin soft ray" EXACT [] is_a: UBERON:4000175 ! pectoral fin lepidotrichium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-5378-0931 [Term] id: UBERON:4500009 name: paired fin spine namespace: uberon def: "Fin spine that is part of a paired fin." [PHENOSCAPE] is_a: UBERON:4440011 ! paired fin lepidotrichium property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-5378-0931 [Term] id: UBERON:4500010 name: unbranched pectoral fin ray namespace: uberon def: "Pectoral fin lepidotrichium that is not distally branched." [PHENOSCAPE] synonym: "pectoral fin unbranched ray" EXACT [] is_a: UBERON:4500007 ! pectoral fin ray property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-5378-0931 [Term] id: UBERON:4500011 name: unbranched pelvic fin ray namespace: uberon def: "Pelvic fin lepidotrichium that is not distally branched." [PHENOSCAPE] synonym: "pelvic fin unbranched ray" EXACT [] is_a: UBERON:4300117 ! pelvic fin ray property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-5378-0931 [Term] id: UBERON:4500020 name: pelvic fin distal radial cartilage namespace: uberon def: "Pelvic fin distal radial element that is composed of cartilage tissue." [PHENOSCAPE] is_a: UBERON:1600008 ! pelvic fin distal radial element is_a: UBERON:1700006 ! paired fin radial cartilage property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-5378-0931 [Term] id: UBERON:5101463 name: manual digit 1 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 1 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 1" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 1 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit I digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102389 ! manual digit digitopodial skeleton is_a: UBERON:5106048 ! digit 1 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5101466 name: pedal digit digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5102389 name: manual digit digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5102544 name: individual digit of digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of a single digit plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:0010712 ! limb skeleton subdivision relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103622 name: manual digit 2 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 2 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 2" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 2 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit II digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102389 ! manual digit digitopodial skeleton is_a: UBERON:5106049 ! digit 2 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103623 name: manual digit 3 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 3 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 3" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 3 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit III digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102389 ! manual digit digitopodial skeleton is_a: UBERON:5106050 ! digit 3 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103624 name: manual digit 4 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 4 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 4" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 4 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit IV digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102389 ! manual digit digitopodial skeleton is_a: UBERON:5106051 ! digit 4 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103625 name: manual digit 5 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 5 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 5" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 5 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit V digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102389 ! manual digit digitopodial skeleton is_a: UBERON:5106052 ! digit 5 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103631 name: pedal digit 1 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 1 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 1" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 1 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit I digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton is_a: UBERON:5106048 ! digit 1 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103632 name: pedal digit 2 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 2 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 2" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 2 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit II digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton is_a: UBERON:5106049 ! digit 2 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103633 name: pedal digit 3 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 3 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 3" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 3 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit III digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton is_a: UBERON:5106050 ! digit 3 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103634 name: pedal digit 4 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 4 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 4" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 4 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit IV digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton is_a: UBERON:5106051 ! digit 4 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5103635 name: pedal digit 5 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 5 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 5" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 5 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit V digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton is_a: UBERON:5106052 ! digit 5 digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5106048 name: digit 1 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 1 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 1" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 1 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit I digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5106049 name: digit 2 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 2 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 2" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 2 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit II digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5106050 name: digit 3 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 3 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 3" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 3 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit III digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5106051 name: digit 4 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 4 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 4" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 4 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit IV digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5106052 name: digit 5 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of digit 5 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "digit 5" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "digit 5 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "digit V digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5102544 ! individual digit of digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5111981 name: manual digit 6 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 6 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 6" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 6 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit VI digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0016876 ! digit 6 digitopodial skeleton is_a: UBERON:5102389 ! manual digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5111982 name: manual digit 7 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 7 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 7" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 7 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit VII digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0016877 ! digit 7 digitopodial skeleton is_a: UBERON:5102389 ! manual digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5111983 name: manual digit 8 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 8 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 8" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit 8 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "manual digit VIII digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:0016878 ! digit 8 digitopodial skeleton is_a: UBERON:5102389 ! manual digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5111984 name: pedal digit 6 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 6 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 6" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 6 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit VI digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5112137 name: pedal digit 7 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 7 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 7" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 7 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit VII digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5112138 name: pedal digit 8 digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 8 plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 8" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit 8 skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] synonym: "pedal digit VIII digitopodial skeleton" EXACT COMPARATIVE_PREFERRED [https://github.com/obophenotype/uberon/issues/458] is_a: UBERON:5101466 ! pedal digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5112260 name: alular digit digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of alular digit plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "alular digit" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "alular digit skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:5102389 ! manual digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5112261 name: manual major digit (Aves) digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual major digit (Aves) plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual major digit (Aves)" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual major digit (Aves) skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:5102389 ! manual digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:5112262 name: manual minor digit (Aves) digitopodial skeleton namespace: uberon def: "A subdivision of the skeleton of the autopod consisting of the phalanges of manual minor digit (Aves) plus the associated metapodial element." [http://orcid.org/0000-0002-6601-2165] synonym: "manual minor digit (Aves)" RELATED COMPARATIVE_PREFERRED [http://orcid.org/0000-0002-6601-2165] synonym: "manual minor digit (Aves) skeleton" RELATED [http://orcid.org/0000-0002-6601-2165] is_a: UBERON:5102389 ! manual digit digitopodial skeleton relationship: part_of UBERON:0012150 ! skeleton of digitopodium property_value: IAO:0000232 "this class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a 'digit', but the label 'digit' is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials." xsd:string [Term] id: UBERON:7500046 name: proximal-most point of head of femur namespace: uberon def: "The proximal-most point of the head of a femur." [https://orcid.org/0000-0003-2699-3066] relationship: part_of UBERON:0006767 ! head of femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500047 name: proximal-most point of head of humerus namespace: uberon def: "The proximal-most point of the head of a humerus." [https://orcid.org/0000-0003-2699-3066] relationship: part_of UBERON:0006801 ! proximal head of humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500048 name: proximal-most point of ventral tubercle of humerus namespace: uberon def: "The proximal-most point of the ventral tubercle of a humerus." [https://orcid.org/0000-0003-2699-3066] relationship: part_of UBERON:0011187 ! ventral tubercle of humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500049 name: proximal-most point of greater trochanter of femur namespace: uberon def: "The proximal-most point of the greater trochanter of a femur." [https://orcid.org/0000-0003-2699-3066] relationship: part_of UBERON:0002503 ! greater trochanter property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500061 name: trochlear ridge of humerus namespace: uberon def: "The ridge of the trochlea on a humerus lies in the middle of the distal end of a humerus on the lateral side of the trochlea and the medial side of the capitulum (capitellum)." [https://orcid.org/0000-0003-2699-3066] relationship: part_of UBERON:0000144 ! trochlea of humerus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500062 name: tibial tuberosity namespace: uberon def: "The tibial tuberosity is on the anterior side of a tibia and is where a patella ligament attaches." [https://en.wikipedia.org/wiki/Tuberosity_of_the_tibia] synonym: "fossa digitalis" EXACT [] relationship: part_of UBERON:0008772 ! proximal epiphysis of tibia property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500063 name: trochlea of talus namespace: uberon def: "The articular surface of a talus that interacts with a tibia. It has a deep depression that forms the trochlear groove and is bounded by the medial and lateral condyles." [https://en.wikipedia.org/wiki/Talus_bone] synonym: "trochlea for tibia" EXACT [] synonym: "trochlea of astragalus" EXACT [] synonym: "trochlea tali" EXACT [] is_a: UBERON:7500081 ! articular surface for the tibia on the talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500064 name: trochlear groove of talus namespace: uberon def: "The furrow between the lateral and medial condyles of the trochlea of talus." [https://en.wikipedia.org/wiki/Talus_bone] synonym: "trochlear groove of astragalus" EXACT [] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500065 name: condyle of talus namespace: uberon def: "An articular prominence of a talus that engages with the tibia." [http://orcid.org/0000-0003-2699-3066] synonym: "condyle of astragalus" EXACT [] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500066 name: medial condyle of talus namespace: uberon def: "The medial condyle of talus is an articular prominence of bone on medial side of the trochlea of a talus, which engages with the tibia." [https://orcid.org/0000-0003-2699-3066] synonym: "medial condyle of astragalus" EXACT [] is_a: UBERON:7500065 ! condyle of talus relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500067 name: lateral condyle of talus namespace: uberon def: "The lateral condyle of talus is an articular prominence of bone on the lateral side of the trochlea of a talus, which engages with the tibia." [https://orcid.org/0000-0003-2699-3066] synonym: "lateral condyle of astragalus" EXACT [] is_a: UBERON:7500065 ! condyle of talus relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500068 name: ridge of medial condyle of talus namespace: uberon def: "The crest of the medial condyle of a talus." [https://orcid.org/0000-0003-2699-3066] synonym: "ridge of medial condyle of astragalus" EXACT [] relationship: part_of UBERON:7500066 ! medial condyle of talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500069 name: ridge of lateral condyle of talus namespace: uberon def: "The crest of the lateral condyle of a talus." [https://orcid.org/0000-0003-2699-3066] synonym: "ridge of lateral condyle of astragalus" EXACT [] relationship: part_of UBERON:7500067 ! lateral condyle of talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500070 name: sulcus tali namespace: uberon def: "A depression that runs between the two facets of a talus that interact with a calcaneum." [https://en.wikipedia.org/wiki/Talus_bone] synonym: "sulcus for flexor hallucis longus tendon" EXACT [] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500078 name: styloid process of radius namespace: uberon def: "A condyle on the distal end and lateral side of a radius." [https://en.wikipedia.org/wiki/Radial_styloid_process] synonym: "radial condyle" EXACT [] synonym: "radial styloid process" EXACT [] is_a: UBERON:0005055 ! zone of long bone relationship: part_of UBERON:0004407 ! distal epiphysis of radius property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500079 name: ulnar notch of radius namespace: uberon def: "A condyle on the distal end and medial side of a radius that interacts with the ulna." [https://en.wikipedia.org/wiki/Ulnar_notch_of_the_radius] synonym: "sigmoid cavity" EXACT [] synonym: "ulnar condyle of radius" EXACT [] relationship: part_of UBERON:0004407 ! distal epiphysis of radius property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500080 name: articular surface for carpals namespace: uberon def: "The articular surface on the distal end of a radius that interacts with carpals." [https://orcid.org/0000-0003-2699-3066] synonym: "distal articular surface of radius" EXACT [] relationship: part_of UBERON:0004407 ! distal epiphysis of radius property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500081 name: articular surface for the tibia on the talus namespace: uberon def: "Contact surface between the tibia and the talus located on the talus." [https://en.wikipedia.org/wiki/Talus_bone] relationship: part_of UBERON:0002395 ! talus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500089 name: posterior articular facet for talus of calcaneus namespace: uberon def: "Posterior-most facet on the proximal surface of the calcaneus for the articulation of the talus bone." [https://orcid.org/0000-0003-2699-3066] synonym: "proximal facet of calcaneum" EXACT [] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500091 name: middle articular facet for talus of calcaneus namespace: uberon def: "Middle facet on the proximal surface of the calcaneus for the articulation of the talus bone." [https://orcid.org/0000-0003-2699-3066] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500092 name: anterior articular facet for talus of calcaneus namespace: uberon def: "Anterior-most facet on the proximal surface of the calcaneus for the articulation of the talus bone." [https://orcid.org/0000-0003-2699-3066] synonym: "distal facet of calcaneum" EXACT [] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500093 name: calcaneal body namespace: uberon def: "The calcaneus body is the part of the bone not used for articulation with other bones." [https://orcid.org/0000-0003-2699-3066] synonym: "corpus calcanei" EXACT [] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500094 name: tubercle of calcaneus namespace: uberon def: "A raised projection on the calcaneus." [https://orcid.org/0000-0003-2699-3066] synonym: "calcaneal tubercle" EXACT [] synonym: "calcaneal tuberosity" EXACT [] synonym: "tuberosity of calcaneus" EXACT [] relationship: part_of UBERON:0001450 ! calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500095 name: lateral tubercle of calcaneus namespace: uberon def: "A raised projection on the lateral side of a calcaneus." [https://orcid.org/0000-0003-2699-3066] synonym: "lateral tuberosity of calcaneus" EXACT [] is_a: UBERON:7500094 ! tubercle of calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500096 name: medial tubercle of calcaneus namespace: uberon def: "A raised projection on the medial side of a calcaneus." [https://orcid.org/0000-0003-2699-3066] synonym: "medial tuberosity of calcaneus" EXACT [] is_a: UBERON:7500094 ! tubercle of calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:7500105 name: coracoid process of calcaneus namespace: uberon def: "At the dorsal part of the base of the calcaneal tuberoisty is a pointed process called the coracoid process." [https://link.springer.com/article/10.1007/s00276-003-0220-0, https://www.imaios.com/en/vet-Anatomy/Vet-Anatomical-Part/Coracoid-process2] synonym: "processus coracoideus of calcaneus" EXACT [] relationship: part_of UBERON:7500094 ! tubercle of calcaneus property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0003-2699-3066 [Term] id: UBERON:8410079 name: red bone marrow of iliac crest namespace: uberon def: "Red bone marrow located in an iliac crest." [http://orcid.org/0000-0001-7655-4833, https://en.wikipedia.org/wiki/Iliac_crest] comment: The iliac crest has a large amount of red bone marrow, and thus it is the site of bone marrow harvests (from both sides) to collect the stem cells used in bone marrow transplantation. synonym: "iliac crest red bone marrow" EXACT [] relationship: part_of UBERON:0014437 ! iliac crest created_by: http://orcid.org/0000-0002-2825-0621 [Term] id: UBERON:8480026 name: skin of iliac crest region namespace: uberon def: "A zone of skin that is above the iliac crest in the pelvic girdle bone/zone." [https://orcid.org/0000-0002-0819-0473] synonym: "skin of posterior iliac crest region" BROAD [] relationship: part_of UBERON:0007830 ! pelvic girdle bone/zone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-0819-0473 property_value: http://purl.org/dc/terms/date "2022-08-29T14:19:16Z" xsd:dateTime [Term] id: UBERON:8480044 name: long bone cartilage element namespace: uberon def: "A skeletal element that is part of a long bone and composed of cartilage tissue." [FMA:32676, https://orcid.org/0000-0002-0819-0473] synonym: "long bone cartilage" EXACT [PMID:33169221] relationship: part_of UBERON:0002495 ! long bone property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-0819-0473 property_value: http://purl.org/dc/terms/date "2023-01-18T07:04:30Z" xsd:dateTime [Term] id: UBERON:8480062 name: femoral head cartilage namespace: uberon def: "A hyaline articular cartilage that covers the head of femur. Provides cushioning, softness and low friction for the hip joint." [PMID:29262200, PMID:36292459] is_a: UBERON:0007391 ! pelvic appendage cartilage tissue is_a: UBERON:8480044 ! long bone cartilage element relationship: part_of UBERON:0006767 ! head of femur property_value: http://purl.org/dc/terms/contributor https://orcid.org/0000-0002-0819-0473 property_value: http://purl.org/dc/terms/date "2023-05-30T06:34:18Z" xsd:dateTime [Term] id: http://owltools.org/Q [Typedef] id: part_of name: part of name: part_of namespace: quality namespace: spatial namespace: uberon def: "a core relation that holds between a part and its whole" [] subset: http://purl.obolibrary.org/obo/valid_for_go_annotation_extension subset: http://purl.obolibrary.org/obo/valid_for_go_gp2term subset: http://purl.obolibrary.org/obo/valid_for_go_ontology subset: http://purl.obolibrary.org/obo/valid_for_gocam xref: BFO:0000050 property_value: IAO:0000111 "is part of" xsd:string property_value: IAO:0000112 "my brain is part of my body (continuant parthood, two material entities)" xsd:string property_value: IAO:0000112 "my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)" xsd:string property_value: IAO:0000112 "this day is part of this year (occurrent parthood)" xsd:string property_value: IAO:0000116 "Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other." xsd:string property_value: IAO:0000116 "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/" xsd:string property_value: IAO:0000116 "Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.)\n\nA continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'." xsd:string property_value: IAO:0000118 "part_of" xsd:string property_value: RO:0001900 RO:0001901 property_value: RO:0040042 BFO:0000002 property_value: RO:0040042 BFO:0000003 property_value: RO:0040042 BFO:0000004 property_value: RO:0040042 BFO:0000017 property_value: RO:0040042 BFO:0000019 property_value: RO:0040042 BFO:0000020 property_value: RO:0040042 BFO:0000031 property_value: seeAlso http://ontologydesignpatterns.org/wiki/Community:Parts_and_Collections property_value: seeAlso http://ontologydesignpatterns.org/wiki/Submissions:PartOf property_value: seeAlso "http://www.obofoundry.org/ro/#OBO_REL:part_of" xsd:string property_value: seeAlso "https://wiki.geneontology.org/Part_of" xsd:anyURI is_transitive: true