pattern_name: abnormalDistanceBetweenAnatomicalEntities 
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalDistanceBetweenAnatomicalEntities.yaml
description: "Distance between two anatomical entites has deviated from normal. For example, PLANP_0000512 'abnormal distance between eye and eye'"

contributors:
  - https://orcid.org/0000-0002-3528-5267
  - https://orcid.org/0000-0001-5208-3432
  - https://orcid.org/0000-0003-4148-4606
  
classes:
  abnormal: PATO:0000460
  anatomical_entity1: UBERON:0001062 
  anatomical_entity2: UBERON:0001062
  distance: PATO:0000040

relations: 
  inheres_in: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051
  towards: RO:0002503

annotationProperties:
  exact_synonym: oio:hasExactSynonym 

vars:
  anatomical_entity1: "'anatomical_entity1'"
  anatomical_entity2: "'anatomical_entity2'"

name:
  text: "abnormal distance between %s and %s"
  vars:
   - anatomical_entity1
   - anatomical_entity2

annotations:
  - 
    annotationProperty: exact_synonym
    text: "abnormal distance between %s and %s"
    vars:
     - anatomical_entity1
     - anatomical_entity2
  - 
    annotationProperty: exact_synonym
    text: "distance abnormal between %s and %s"
    vars:
     - anatomical_entity1
     - anatomical_entity2

def:
  text: "abnormal distance between %s and %s."
  vars:
    - anatomical_entity1
    - anatomical_entity2

equivalentTo:
  text: "'has_part' some ('distance' and ('inheres_in' some %s) and ('towards' some %s) and ('has_modifier' some 'abnormal'))"
  vars:
    - anatomical_entity1
    - anatomical_entity2