pattern_name: abnormalLevelOfChemicalEntityWithRoleInLocation
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalLevelOfChemicalEntityWithRoleInLocation.yaml
description: "An abnormal level of a chemical with a specific role, such as a metabolite or hormone like androgen, in a location, such as blood. For example, HP_0030347 'Abnormal circulating androgen level'."

contributors:
  - https://orcid.org/0000-0001-5208-3432
  - https://orcid.org/0000-0002-3528-5267
  
classes:
  amount: PATO:0000070
  abnormal: PATO:0000460
  chemical entity: CHEBI:24431
  role: CHEBI:50906
  independent continuant: BFO:0000004

relations:
  inheres_in: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051
  has_role: RO:0000087
  part_of: BFO:0000050

annotationProperties:
  exact_synonym: oio:hasExactSynonym

vars:
  role: "role"
  location: "'independent continuant'"

name:
  text: "abnormal %s %s level"
  vars:
  - role
  - location

def:
  text: "An abnormal amount of %s in the %s."
  vars:
  - role
  - location

equivalentTo:
  text: "'has_part' some ('amount' and ('inheres_in' some ('chemical entity' and ('has_role' some %s) and ('part_of' some %s))) and ('has_modifier' some 'abnormal'))"
  vars:
  - role
  - location