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Protein Ontology report - rep gene translation product (SARS-CoV-2)
PR:000050263 -
http://purl.obolibrary.org/obo/PR_000050263
Protein Forms
Ontology Information
Show OBO stanza
/
GPI
PRO ID
PR:000050263
PRO name
rep gene translation product (SARS-CoV-2)
Synonyms
PRO-Short-label
:
EXACT:
ORF1ab (SARS2)
Gene-based
:
RELATED:
GU280_gp01 | ORF1a-1b | ORF1ab | rep
Definition
"A protein that is a translation product of the ORF1ab gene in SARS-CoV-2." [PRO:DAN]
Comment
Note: The rep gene produces two translation products, one with (ORF1ab) and one without (ORF1a) -1 ribosomal frameshifting. Both products are further processed by proteolytic cleavage to yield 10 identical chains, while 1 additional chain is unique to ORF1a and 5 additional chains are unique to ORF1ab.
PRO Category
organism-gene
Parent
PR:000050262
Gene Template
OGG:3043740579
ORF1ab of severe acute respiratory syndrome coronavirus 2
Taxon
NCBITaxon:2697049
Severe acute respiratory syndrome coronavirus 2
Terms by PRO Category
Organism-Independent
Organism-Specific
Category
Number of Terms
Category
Number of Terms
Gene
0
Organism-Gene
0
Sequence
0
Organism-Sequence
0
Modification
0
Organism-Modification
0
Term Hierarchy
Visualization
DAG:
OLS:
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Protein Forms
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Extended View
Category
PRO Form Name
Ann.
Has Annotation?
Comp.
In Complex?
organism-gene
PR:000050263
rep gene translation product (SARS-CoV-2), ORF1ab (SARS2)
organism-modification
PR:000050281
rep gene proteolytic cleavage product (SARS-CoV-2), rep/ClvPrd (SARS2)
PR:000050270
,
PR:000050271
,
PR:000050272
,
PR:000050273
,
organism-modification
PR:000050274
3C-like proteinase nsp5 (SARS-CoV-2), rep/Clv:nsp5 (SARS2)
PR:000050275
,
PR:000050276
,
PR:000050277
,
PR:000050278
,
PR:000050279
,
organism-modification
PR:000050282
ORF1a proteolytic cleavage product (SARS-CoV-2), ORF1a/ClvPrd (SARS2)
organism-modification
PR:000050280
non-structural protein 11 (SARS-CoV-2), rep/Clv:nsp11 (SARS2)
organism-modification
PR:000050283
ORF1ab proteolytic cleavage product (SARS-CoV-2), ORF1ab/ClvPrd (SARS2)
PR:000050284
,
PR:000050285
,
PR:000050286
,
PR:000050287
,
PR:000050288
,
organism-modification
PR:000050289
NSP2-3 intermediate (SARS-CoV-2), rep/Clv:nsp2-3 (SARS2)
PR:P0DTC1-1
,
organism-modification
PR:000050282
ORF1a proteolytic cleavage product (SARS-CoV-2), ORF1a/ClvPrd (SARS2)
organism-modification
PR:000050280
non-structural protein 11 (SARS-CoV-2), rep/Clv:nsp11 (SARS2)
PR:P0DTD1-1
,
organism-modification
PR:000050283
ORF1ab proteolytic cleavage product (SARS-CoV-2), ORF1ab/ClvPrd (SARS2)
PR:000050284
,
PR:000050285
,
PR:000050286
,
PR:000050287
,
PR:000050288
,